View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19675_low_41 (Length: 349)
Name: NF19675_low_41
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19675_low_41 |
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Alignment Details
Target: chr4 (Bit Score: 290; Significance: 1e-163; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 45777281 - 45776976
Alignment:
| Q |
1 |
aacacttcatgaagtgaaactgaatttgtgtatgagattttgttcacatttacagaaacctaaaattaattttcttgttcacaattgctttatacagaaa |
100 |
Q |
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| T |
45777281 |
aacacttcatgaagtgaaactgaatttgtgtatgagattttgttcacatttacagaaacccaaaattaattttcttgttcacaattgctttatacagaaa |
45777182 |
T |
|
| Q |
101 |
ttcaagatgtggtgttggttattaaaccttgcgggcaagcagggctaacaagggtggtttgctattgagactcatttcaagaaatgcaattgattactac |
200 |
Q |
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| T |
45777181 |
ttcaagatgtggtgttggttattaaaccttgcgggcaagcagggctaacaagcgtggtttgctattgagactcatttcaagaaatgcaattgattactac |
45777082 |
T |
|
| Q |
201 |
aggaaacgctccttaatttgcaccattatgttaacctattggagatcattcataattatatgaagaaggattgaattttactatccatcatactctttgg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45777081 |
tggaaacgctccttaatttgcaccattatgttaacctattagagatcattcataattatatgaagaaggattgaattttactatccatcatactctttgg |
45776982 |
T |
|
| Q |
301 |
gaggat |
306 |
Q |
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|||||| |
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| T |
45776981 |
gaggat |
45776976 |
T |
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