View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19675_low_78 (Length: 238)
Name: NF19675_low_78
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19675_low_78 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 44879937 - 44879717
Alignment:
| Q |
1 |
cagatcaatctagaagtattttaattggcgttacaactattttttggattaattctgcacaacttccaacatctacaatatgctactcctccaatattgg |
100 |
Q |
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| T |
44879937 |
cagatcaatctagaagtattttaattggcgttacaactattttttggattaattctgcacaacttccaacatctacaatatgctactcctccaatattgg |
44879838 |
T |
|
| Q |
101 |
atagactgaaagaagtttcttgaaatcttctcatcattgaaataaactactttcattggagggttttgagc-aaaggaaaatcaacataactatcgtgca |
199 |
Q |
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| T |
44879837 |
atagactgaaagaagtttcttgaaatctcctcatca-tgaaataaactactttcattggagggttttgagcaaaaggaaaatcaacataactatcgtgca |
44879739 |
T |
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| Q |
200 |
gattggttcatctattgttact |
221 |
Q |
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|||||||||||||||||||||| |
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| T |
44879738 |
gattggttcatctattgttact |
44879717 |
T |
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