View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19675_low_85 (Length: 229)

Name: NF19675_low_85
Description: NF19675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19675_low_85
NF19675_low_85
[»] chr6 (22 HSPs)
chr6 (33-209)||(14278105-14278281)
chr6 (113-186)||(14258375-14258448)
chr6 (127-209)||(14283685-14283767)
chr6 (34-89)||(20863401-20863456)
chr6 (33-92)||(28363960-28364019)
chr6 (35-92)||(33549127-33549184)
chr6 (33-92)||(6776601-6776660)
chr6 (53-92)||(12188317-12188356)
chr6 (42-92)||(31622994-31623044)
chr6 (51-92)||(10338186-10338227)
chr6 (53-92)||(24641204-24641243)
chr6 (51-93)||(8639128-8639170)
chr6 (41-115)||(13661520-13661594)
chr6 (51-85)||(23910123-23910157)
chr6 (38-92)||(30127423-30127477)
chr6 (62-92)||(34786477-34786507)
chr6 (35-92)||(6385885-6385942)
chr6 (39-76)||(14199947-14199984)
chr6 (33-93)||(11103429-11103489)
chr6 (36-92)||(19638001-19638057)
chr6 (34-86)||(20213070-20213122)
chr6 (34-86)||(22107093-22107145)
[»] scaffold1030 (1 HSPs)
scaffold1030 (120-209)||(3202-3291)
[»] chr3 (49 HSPs)
chr3 (35-114)||(31520601-31520681)
chr3 (33-92)||(4222164-4222223)
chr3 (33-92)||(46518651-46518710)
chr3 (33-89)||(31608518-31608574)
chr3 (33-91)||(31788964-31789022)
chr3 (34-92)||(32651433-32651491)
chr3 (48-92)||(7975441-7975485)
chr3 (36-92)||(30311329-30311385)
chr3 (33-92)||(27093355-27093414)
chr3 (33-91)||(27259185-27259243)
chr3 (33-91)||(28703398-28703456)
chr3 (34-79)||(3427548-3427593)
chr3 (33-90)||(10445133-10445190)
chr3 (38-91)||(11090164-11090217)
chr3 (35-92)||(21960574-21960631)
chr3 (35-92)||(51903874-51903931)
chr3 (48-92)||(28531067-28531111)
chr3 (33-85)||(39253727-39253779)
chr3 (37-92)||(14339633-14339688)
chr3 (33-92)||(15048055-15048114)
chr3 (38-89)||(44069784-44069835)
chr3 (34-92)||(2667885-2667943)
chr3 (34-92)||(36720404-36720462)
chr3 (31-93)||(47860778-47860839)
chr3 (51-92)||(4844523-4844564)
chr3 (51-92)||(4870219-4870260)
chr3 (51-88)||(44743867-44743904)
chr3 (51-92)||(47279416-47279457)
chr3 (35-114)||(10499105-10499185)
chr3 (56-92)||(28928896-28928932)
chr3 (33-84)||(2709408-2709459)
chr3 (33-92)||(16354886-16354945)
chr3 (37-76)||(17108896-17108935)
chr3 (37-92)||(47454615-47454670)
chr3 (33-92)||(53412968-53413027)
chr3 (58-92)||(9557343-9557377)
chr3 (54-92)||(17554794-17554832)
chr3 (34-92)||(37788460-37788518)
chr3 (35-81)||(51766929-51766975)
chr3 (34-91)||(13808880-13808937)
chr3 (35-92)||(14186671-14186727)
chr3 (35-92)||(16991565-16991622)
chr3 (35-88)||(26481954-26482007)
chr3 (51-92)||(40063642-40063683)
chr3 (51-114)||(5499419-5499483)
chr3 (52-92)||(18319181-18319221)
chr3 (48-92)||(42430357-42430400)
chr3 (33-89)||(53863862-53863917)
chr3 (37-89)||(54990728-54990780)
[»] chr2 (32 HSPs)
chr2 (33-92)||(1729839-1729898)
chr2 (33-92)||(16918572-16918631)
chr2 (35-92)||(42602577-42602634)
chr2 (36-92)||(42327392-42327448)
chr2 (33-92)||(11251110-11251169)
chr2 (37-114)||(37480075-37480153)
chr2 (33-86)||(14500306-14500359)
chr2 (35-91)||(4262298-4262354)
chr2 (34-117)||(11062357-11062441)
chr2 (37-92)||(29503294-29503349)
chr2 (33-92)||(34041582-34041641)
chr2 (34-92)||(19322791-19322849)
chr2 (52-116)||(4438992-4439057)
chr2 (34-122)||(5147674-5147763)
chr2 (35-92)||(7799031-7799088)
chr2 (51-92)||(12086141-12086182)
chr2 (33-89)||(28194256-28194311)
chr2 (33-92)||(42922437-42922497)
chr2 (33-92)||(19244132-19244191)
chr2 (37-92)||(23052521-23052576)
chr2 (37-84)||(38410438-38410485)
chr2 (37-92)||(39715015-39715070)
chr2 (53-118)||(16381668-16381734)
chr2 (37-114)||(19016031-19016109)
chr2 (51-89)||(30359680-30359718)
chr2 (54-92)||(30410564-30410602)
chr2 (51-92)||(12994388-12994429)
chr2 (33-74)||(45026784-45026825)
chr2 (33-89)||(8192474-8192529)
chr2 (34-70)||(12497777-12497813)
chr2 (37-89)||(12517751-12517803)
chr2 (36-92)||(26545863-26545919)
[»] chr5 (30 HSPs)
chr5 (35-92)||(14495801-14495858)
chr5 (33-92)||(34984829-34984888)
chr5 (33-92)||(27596350-27596409)
chr5 (33-115)||(29075780-29075863)
chr5 (33-92)||(43442219-43442278)
chr5 (51-88)||(84851-84888)
chr5 (39-92)||(87423-87476)
chr5 (33-90)||(14285186-14285243)
chr5 (35-92)||(29692382-29692439)
chr5 (51-92)||(30883210-30883251)
chr5 (33-116)||(7918463-7918547)
chr5 (33-92)||(16773830-16773889)
chr5 (34-93)||(17028259-17028318)
chr5 (33-92)||(18595995-18596054)
chr5 (33-92)||(25627080-25627139)
chr5 (33-92)||(37258360-37258419)
chr5 (35-86)||(39327086-39327137)
chr5 (37-91)||(41165627-41165681)
chr5 (51-92)||(16457833-16457874)
chr5 (35-92)||(22020858-22020915)
chr5 (34-91)||(25979194-25979251)
chr5 (58-115)||(8278294-8278352)
chr5 (51-92)||(1410671-1410712)
chr5 (51-92)||(4793100-4793141)
chr5 (51-92)||(16436641-16436681)
chr5 (59-92)||(17761375-17761408)
chr5 (55-115)||(18989017-18989078)
chr5 (59-92)||(21549157-21549190)
chr5 (34-91)||(43230769-43230826)
chr5 (33-81)||(21086748-21086796)
[»] chr4 (48 HSPs)
chr4 (33-90)||(37274453-37274510)
chr4 (33-92)||(37109345-37109404)
chr4 (33-92)||(38869791-38869850)
chr4 (33-92)||(53496900-53496959)
chr4 (34-91)||(23377980-23378037)
chr4 (33-92)||(4249200-4249259)
chr4 (33-92)||(7949448-7949507)
chr4 (33-92)||(31759652-31759711)
chr4 (38-91)||(5450117-5450170)
chr4 (33-85)||(28635726-28635778)
chr4 (55-114)||(51250538-51250598)
chr4 (33-92)||(19680782-19680841)
chr4 (52-114)||(37720227-37720290)
chr4 (37-88)||(39509097-39509148)
chr4 (33-91)||(3743104-3743162)
chr4 (34-92)||(7292793-7292851)
chr4 (51-116)||(9241037-9241103)
chr4 (33-90)||(2622389-2622446)
chr4 (51-115)||(19238589-19238654)
chr4 (36-85)||(48480823-48480872)
chr4 (35-92)||(49576890-49576947)
chr4 (36-92)||(8714702-8714758)
chr4 (33-116)||(46545709-46545793)
chr4 (33-92)||(1730483-1730542)
chr4 (33-92)||(11592147-11592206)
chr4 (40-91)||(12821992-12822043)
chr4 (37-92)||(30938217-30938272)
chr4 (38-112)||(40283985-40284060)
chr4 (33-92)||(52880165-52880224)
chr4 (34-92)||(13265103-13265161)
chr4 (51-89)||(32992638-32992676)
chr4 (53-87)||(46329192-46329226)
chr4 (51-89)||(47202435-47202473)
chr4 (37-114)||(55427198-55427276)
chr4 (51-92)||(8030216-8030257)
chr4 (48-85)||(14451755-14451792)
chr4 (33-92)||(15180764-15180820)
chr4 (51-92)||(16581716-16581757)
chr4 (51-92)||(17618304-17618345)
chr4 (51-92)||(31826632-31826673)
chr4 (35-88)||(38838824-38838877)
chr4 (33-89)||(7093395-7093450)
chr4 (37-89)||(8325377-8325429)
chr4 (51-114)||(21344817-21344880)
chr4 (36-92)||(33619229-33619285)
chr4 (52-92)||(33632149-33632189)
chr4 (37-89)||(46295123-46295175)
chr4 (37-116)||(47044715-47044795)
[»] chr1 (46 HSPs)
chr1 (36-92)||(15786317-15786373)
chr1 (33-92)||(8177176-8177235)
chr1 (33-92)||(10526846-10526905)
chr1 (33-92)||(33700767-33700826)
chr1 (39-114)||(41508831-41508907)
chr1 (35-114)||(51814494-51814574)
chr1 (33-92)||(2799885-2799944)
chr1 (35-90)||(18459227-18459282)
chr1 (33-92)||(21267987-21268046)
chr1 (33-92)||(36371493-36371552)
chr1 (53-92)||(44046162-44046201)
chr1 (37-114)||(19528325-19528403)
chr1 (35-111)||(9964441-9964518)
chr1 (33-116)||(9165189-9165273)
chr1 (34-113)||(44126396-44126476)
chr1 (33-92)||(6650618-6650677)
chr1 (45-92)||(9643815-9643862)
chr1 (33-92)||(51703802-51703861)
chr1 (33-92)||(52336768-52336827)
chr1 (33-91)||(4566572-4566630)
chr1 (34-92)||(11063579-11063637)
chr1 (51-92)||(31794276-31794317)
chr1 (37-89)||(4824997-4825049)
chr1 (35-91)||(12587294-12587350)
chr1 (33-85)||(22049822-22049874)
chr1 (51-114)||(40257399-40257463)
chr1 (33-76)||(3265963-3266006)
chr1 (33-92)||(8904437-8904496)
chr1 (35-86)||(12370192-12370243)
chr1 (37-92)||(25297795-25297850)
chr1 (33-84)||(40810498-40810549)
chr1 (35-90)||(50901607-50901662)
chr1 (34-92)||(6122817-6122875)
chr1 (53-114)||(16169992-16170054)
chr1 (35-81)||(17439951-17439997)
chr1 (33-91)||(31049637-31049695)
chr1 (37-86)||(17297013-17297062)
chr1 (59-92)||(31383818-31383851)
chr1 (51-92)||(47753737-47753778)
chr1 (35-72)||(51281394-51281431)
chr1 (51-92)||(52116793-52116834)
chr1 (37-89)||(952537-952589)
chr1 (33-77)||(1247151-1247195)
chr1 (52-92)||(24730407-24730447)
chr1 (37-89)||(39714777-39714828)
chr1 (37-85)||(48615341-48615389)
[»] scaffold0299 (1 HSPs)
scaffold0299 (33-92)||(11551-11610)
[»] chr7 (50 HSPs)
chr7 (33-92)||(26459404-26459463)
chr7 (34-117)||(18363693-18363777)
chr7 (35-90)||(17041008-17041063)
chr7 (51-112)||(21854550-21854612)
chr7 (34-92)||(43215207-43215265)
chr7 (35-114)||(5273586-5273666)
chr7 (36-92)||(30442511-30442567)
chr7 (36-92)||(31706448-31706504)
chr7 (33-92)||(7744106-7744165)
chr7 (33-115)||(15137552-15137635)
chr7 (37-92)||(22760886-22760941)
chr7 (34-116)||(39631842-39631925)
chr7 (34-92)||(9608624-9608682)
chr7 (34-92)||(9836196-9836254)
chr7 (33-87)||(9871280-9871334)
chr7 (34-84)||(37094780-37094830)
chr7 (34-91)||(23552142-23552199)
chr7 (51-92)||(25021347-25021388)
chr7 (51-92)||(25590634-25590675)
chr7 (36-89)||(29385740-29385793)
chr7 (51-92)||(29785313-29785354)
chr7 (59-92)||(48771961-48771994)
chr7 (37-89)||(5579232-5579284)
chr7 (48-92)||(19553477-19553520)
chr7 (51-91)||(26703149-26703189)
chr7 (51-91)||(37233584-37233624)
chr7 (37-89)||(38374597-38374649)
chr7 (54-117)||(42836016-42836080)
chr7 (33-92)||(7721392-7721451)
chr7 (37-92)||(11720958-11721013)
chr7 (37-92)||(20335829-20335884)
chr7 (33-92)||(25655222-25655281)
chr7 (33-92)||(33222393-33222452)
chr7 (33-92)||(41519258-41519317)
chr7 (34-85)||(42262090-42262141)
chr7 (37-92)||(43590930-43590985)
chr7 (59-89)||(5934147-5934177)
chr7 (33-114)||(30579335-30579417)
chr7 (58-114)||(2446308-2446365)
chr7 (51-92)||(3280497-3280538)
chr7 (51-92)||(7801203-7801244)
chr7 (59-92)||(15905693-15905726)
chr7 (35-92)||(20952145-20952202)
chr7 (51-92)||(28236593-28236634)
chr7 (51-92)||(45709720-45709761)
chr7 (33-93)||(17113817-17113877)
chr7 (48-92)||(25956302-25956345)
chr7 (51-91)||(30217903-30217943)
chr7 (51-114)||(31835192-31835256)
chr7 (33-116)||(33869439-33869523)
[»] scaffold0194 (1 HSPs)
scaffold0194 (35-92)||(13042-13099)
[»] chr8 (36 HSPs)
chr8 (33-92)||(35690058-35690117)
chr8 (35-92)||(968385-968442)
chr8 (51-92)||(2203515-2203556)
chr8 (35-92)||(3624603-3624660)
chr8 (35-92)||(7140732-7140789)
chr8 (36-92)||(11492070-11492126)
chr8 (38-86)||(11793520-11793568)
chr8 (34-90)||(44780109-44780165)
chr8 (33-92)||(3305182-3305241)
chr8 (33-92)||(6536543-6536602)
chr8 (37-92)||(16852363-16852418)
chr8 (33-92)||(18540321-18540380)
chr8 (37-92)||(19703485-19703540)
chr8 (33-92)||(23361643-23361702)
chr8 (35-77)||(22193360-22193402)
chr8 (33-91)||(33017238-33017296)
chr8 (48-89)||(3524410-3524451)
chr8 (51-92)||(28783083-28783124)
chr8 (51-111)||(36205198-36205259)
chr8 (59-91)||(6569791-6569823)
chr8 (51-114)||(26688865-26688929)
chr8 (35-91)||(34628666-34628722)
chr8 (33-92)||(6436549-6436608)
chr8 (33-92)||(8794339-8794398)
chr8 (57-92)||(30483902-30483937)
chr8 (34-92)||(11819799-11819857)
chr8 (34-92)||(27750753-27750811)
chr8 (35-92)||(4435998-4436055)
chr8 (35-92)||(12281517-12281574)
chr8 (33-82)||(24675506-24675555)
chr8 (51-92)||(29858061-29858102)
chr8 (35-92)||(30774732-30774789)
chr8 (37-94)||(40136961-40137017)
chr8 (34-91)||(43594313-43594370)
chr8 (51-114)||(8059632-8059696)
chr8 (33-85)||(18128540-18128591)
[»] scaffold0258 (1 HSPs)
scaffold0258 (35-92)||(15319-15376)
[»] scaffold0006 (1 HSPs)
scaffold0006 (33-90)||(18324-18381)
[»] scaffold0417 (1 HSPs)
scaffold0417 (35-114)||(10219-10299)
[»] scaffold0291 (1 HSPs)
scaffold0291 (37-92)||(2468-2523)
[»] scaffold0180 (1 HSPs)
scaffold0180 (33-92)||(19956-20015)
[»] scaffold1367 (1 HSPs)
scaffold1367 (34-92)||(835-893)
[»] scaffold0004 (1 HSPs)
scaffold0004 (37-91)||(81562-81616)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-92)||(94983-95024)
[»] scaffold0021 (1 HSPs)
scaffold0021 (52-92)||(157000-157040)
[»] scaffold0172 (1 HSPs)
scaffold0172 (37-92)||(15775-15830)
[»] scaffold0063 (1 HSPs)
scaffold0063 (49-92)||(35399-35442)
[»] scaffold0238 (1 HSPs)
scaffold0238 (33-90)||(5218-5275)
[»] scaffold0009 (1 HSPs)
scaffold0009 (59-92)||(19867-19900)
[»] scaffold0047 (1 HSPs)
scaffold0047 (55-114)||(14987-15047)
[»] scaffold0032 (1 HSPs)
scaffold0032 (35-114)||(112282-112362)


Alignment Details
Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 33 - 209
Target Start/End: Original strand, 14278105 - 14278281
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacatcaggcaaacccatgtgggttattaaatacttggtagtt 132  Q
    |||||||||||||| || ||||||| ||||||||| ||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  14278105 cagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatacaccaggccaacccatgtgggttattaaatactttgtagtt 14278204  T
Q  133 attcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaat 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14278205 attcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaat 14278281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 113 - 186
Target Start/End: Original strand, 14258375 - 14258448
Alignment:
Q  113 ttattaaatacttggtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttacta 186  Q
    ||||||||||| | |||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||    
T  14258375 ttattaaatacatagtagttattcttacttaggatgcaatccacaatttaataagcatcactttattcttacta 14258448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 14283685 - 14283767
Alignment:
Q  127 gtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaat 209  Q
    |||||| | ||||||||||||| |||||| ||| || |||||||||||| ||||||||||| || ||||| ||||||||||||    
T  14283685 gtagttctacttacttaggatgcaatccacaatttagtaagcatcactttattcttactaggtagtagaagtacaaaagaaat 14283767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 20863456 - 20863401
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    |||||||||||||||| |||||||||||||||||||||||| |  |||||||||||    
T  20863456 agagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaa 20863401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 28364019 - 28363960
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||| ||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  28364019 cagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaatac 28363960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 33549184 - 33549127
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  33549184 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 33549127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 6776601 - 6776660
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||  | |||| | |||||||||||||| ||||||||||||||||||||    
T  6776601 cagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaatac 6776660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 12188317 - 12188356
Alignment:
Q  53 accttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  12188317 accttgaggaggagcacactcccaggtcccaagccaatac 12188356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 92
Target Start/End: Original strand, 31622994 - 31623044
Alignment:
Q  42 tcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| || |||||| |||||||||||||||||||| ||||||||||||||    
T  31622994 tcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 31623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 10338186 - 10338227
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  10338186 agaccttgaggaggagcacactcctaggtcccaagccaatac 10338227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 24641204 - 24641243
Alignment:
Q  53 accttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaatac 24641243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 8639170 - 8639128
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaataca 93  Q
    |||||||||||||||||||| | ||||||| ||||||||||||    
T  8639170 agaccttgaggaggagcacatttccagatctcaagccaataca 8639128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 115
Target Start/End: Complemental strand, 13661594 - 13661520
Alignment:
Q  41 atcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacatcaggcaaacccatgtgggtta 115  Q
    |||||| || |||||| |||||||||||||||||||  |  ||||||||||||  || | |||||||||||||||    
T  13661594 atcaaacctgagacctcgaggaggagcacactcccaagtgtcaagccaatacactagaccaacccatgtgggtta 13661520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 23910123 - 23910157
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||||||||||||||||||||||| |||||||    
T  23910123 agaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 92
Target Start/End: Complemental strand, 30127477 - 30127423
Alignment:
Q  38 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| || || |||||| || |||||||||||||||||| |||||||||||||    
T  30127477 agaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaatac 30127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 92
Target Start/End: Original strand, 34786477 - 34786507
Alignment:
Q  62 aggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||||||||||    
T  34786477 aggagcacactcccagatcccaagccaatac 34786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 6385942 - 6385885
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || ||||||| |||||||||||| |||||| ||||||| ||||||    
T  6385942 gagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatac 6385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 76
Target Start/End: Original strand, 14199947 - 14199984
Alignment:
Q  39 gaatcaaatctaagaccttgaggaggagcacactccca 76  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  14199947 gaatcgaatctgagaccttgaggaggagcacactccca 14199984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Original strand, 11103429 - 11103489
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 93  Q
    ||||||||||| ||||  ||||||| |||||||||||||| |||  |||||||| ||||||    
T  11103429 cagagagaatcgaatcggagaccttaaggaggagcacactaccaagtcccaagcgaataca 11103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 19638001 - 19638057
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || ||||||||||  ||||||||||||||| | ||| ||||||||    
T  19638001 agagaatcaaacctgagaccttgagctggagcacactcccaggttccacgccaatac 19638057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 20213122 - 20213070
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    |||| ||||| || || |||| |||||||||||||||||||||| ||||||||    
T  20213122 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 22107145 - 22107093
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    |||| ||||| || || |||| |||||||||||||||||||||| ||||||||    
T  22107145 agagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1030 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold1030
Description:

Target: scaffold1030; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 3291 - 3202
Alignment:
Q  120 atacttggtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaat 209  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3291 atactttgtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaat 3202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 4e-19; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 31520601 - 31520681
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgggtt 114  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||| |||||| |||||||    
T  31520601 gagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 4222223 - 4222164
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  4222223 cagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaatac 4222164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 46518710 - 46518651
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  46518710 cagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 46518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 31608518 - 31608574
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  31608518 cagagagaatcaaatctgagacctcgaggaggagcacactcccagatctcaagccaa 31608574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 31788964 - 31789022
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  31788964 cagagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaata 31789022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 32651433 - 32651491
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  32651433 agagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaatac 32651491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 7975485 - 7975441
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  7975485 ctaagaccttgaggaggagcacactcccagatcccaagcctatac 7975441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 30311385 - 30311329
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || || ||||||||||||||||||||||||||||||||||||| ||||    
T  30311385 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctatac 30311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 27093355 - 27093414
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| || ||||||||||||||||||||||||||  | ||||||||||||    
T  27093355 cagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaatac 27093414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 27259243 - 27259185
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||||||| || | |||| |||||||||||||||||||| |||||||||||||    
T  27259243 cagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 28703398 - 28703456
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||||| || || ||||||||| |||||||||||||||||||||||||| ||||    
T  28703398 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaata 28703456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 3427548 - 3427593
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagat 79  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||    
T  3427548 agagagaatcgaatctgagaccttgaggaggagcacactcccagat 3427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 10445133 - 10445190
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||||| || || |||||| |||||||||||||||||||| ||||||||||||    
T  10445133 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Original strand, 11090164 - 11090217
Alignment:
Q  38 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||| || ||||||||| ||||||||||||| ||||||||||||||||||||    
T  11090164 agaatcgaaactaagacctcgaggaggagcacattcccagatcccaagccaata 11090217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 21960631 - 21960574
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| ||||| |||||| |||||||||||||||| ||| ||||||||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaatac 21960574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 51903874 - 51903931
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || |||||  |||||||||||||||||||||||||||||||||||    
T  51903874 gagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatac 51903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 28531067 - 28531111
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  28531067 ctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 39253779 - 39253727
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||||||| || || ||||||||| |||||||||||||||||||||||||    
T  39253779 cagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 14339688 - 14339633
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||| ||||||||||||||||||||| |||||||||||||||    
T  14339688 gagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaatac 14339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 15048055 - 15048114
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||| || || |||||||||||||||||||| |||||||||||||||| ||||    
T  15048055 cagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctatac 15048114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 44069835 - 44069784
Alignment:
Q  38 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||| || |||||||||||||||||||||||| ||||| ||||||||    
T  44069835 agaatcaaacctgagaccttgaggaggagcacactccaagatctcaagccaa 44069784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 2667943 - 2667885
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| |||| || || |||||| ||||| |||||||||||||||||||||||||||||    
T  2667943 agagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaatac 2667885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 36720462 - 36720404
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || | |||| ||||||||||||||||||| |||||||||||||||    
T  36720462 agagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaatac 36720404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 47860839 - 47860778
Alignment:
Q  31 agcagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 93  Q
    ||||||||||||| || || |||| ||||||||||||||||||| |||||| |||||||||||    
T  47860839 agcagagagaatcgaa-ctgagactttgaggaggagcacactcctagatccaaagccaataca 47860778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 4844523 - 4844564
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  4844523 agacctcgaggaggagcacactcccagatcccaagtcaatac 4844564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 4870219 - 4870260
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||||||||||||||||||||| ||||||    
T  4870219 agacctcgaggaggagcacactcccagatcccaagtcaatac 4870260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 88
Target Start/End: Original strand, 44743867 - 44743904
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagcca 88  Q
    |||||| |||||||||||||||||||||||||||||||    
T  44743867 agacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 47279416 - 47279457
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  47279416 agaccttaaggaggagcacactcccagatcccaagcaaatac 47279457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 10499105 - 10499185
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||||| || || ||||||  |||| ||||| |||||||||||||||||||||| || ||||| |||||| |||||||    
T  10499105 gagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 28928896 - 28928932
Alignment:
Q  56 ttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaatac 28928932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 2709459 - 2709408
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 84  Q
    |||||||||||||| |||| |||| ||||||||||| ||| |||||||||||    
T  2709459 cagagagaatcaaacctaaaacctcgaggaggagcatacttccagatcccaa 2709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 16354886 - 16354945
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||| ||||||||||||||||| ||| | ||||||||||||    
T  16354886 cagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaatac 16354945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 76
Target Start/End: Original strand, 17108896 - 17108935
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactccca 76  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcacactccca 17108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 47454615 - 47454670
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||||| ||||||||||||||||| ||||| |||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaatac 47454670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 53413027 - 53412968
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||  || || ||||||||||||||||||||||||||| |  |||||||||||    
T  53413027 cagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaatac 53412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Complemental strand, 9557377 - 9557343
Alignment:
Q  58 gaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||| ||||||||||||||||||    
T  9557377 gaggaggagcacactctcagatcccaagccaatac 9557343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Complemental strand, 17554832 - 17554794
Alignment:
Q  54 ccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  17554832 ccttgaggaagagcacactcccaggtcccaagccaatac 17554794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 37788460 - 37788518
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || |||||||||||||||||||||||| || | ||||| ||||||    
T  37788460 agagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaatac 37788518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 51766975 - 51766929
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcc 81  Q
    ||||||||| ||||| | |||||||||| ||||||||||||||||||    
T  51766975 gagagaatcgaatctgaaaccttgaggaagagcacactcccagatcc 51766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 13808880 - 13808937
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||  || || |||||| ||||||||||||||| |||||||||||| |||||    
T  13808880 agagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaata 13808937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 14186727 - 14186671
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || |||||||||||||||||||||| |||| ||||||| ||||||    
T  14186727 gagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaatac 14186671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 16991622 - 16991565
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||| || ||||||  | || ||| |||||||||||||||||||||||||    
T  16991622 gagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaatac 16991565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 26482007 - 26481954
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 88  Q
    ||||||||| || |||| || |||||||||||||||||| ||| ||||||||||    
T  26482007 gagagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagcca 26481954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 40063683 - 40063642
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| |||||||||| |||| ||||||||||||||||||    
T  40063683 agaccttaaggaggagcatactctcagatcccaagccaatac 40063642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 5499419 - 5499483
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||| ||||||||||||||| |||||| |||| ||||| || ||||| |||||| |||||||    
T  5499419 agaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 18319181 - 18319221
Alignment:
Q  52 gaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| ||||||||||||||||| |||||| |||||||    
T  18319181 gaccttgaagaggagcacactcccaggtcccaaaccaatac 18319221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 42430400 - 42430357
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  42430400 ctaagaccttgag-aggagcacactccaagatcccaagtcaatac 42430357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 53863862 - 53863917
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||  || ||||||||||||| ||||||||||||| || |||||||||||    
T  53863862 cagagagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaa 53863917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||| || || ||||||||||||||||||| |||| || |||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 1e-18; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 1729898 - 1729839
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  1729898 cagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaatac 1729839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 16918572 - 16918631
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  16918572 cagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaatac 16918631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 42602634 - 42602577
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  42602634 gagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaatac 42602577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 42327392 - 42327448
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  42327392 agagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 42327448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 11251169 - 11251110
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| || |||||||||||||||||||||| |||  ||||||||||||||    
T  11251169 cagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaatac 11251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 37480153 - 37480075
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||| || || ||||||||||||||||||||||| ||| ||||||||||||| || ||||| |||||| |||||||    
T  37480153 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 14500359 - 14500306
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    ||||||||||| ||||| |||||| ||||||||||||||||||||||| |||||    
T  14500359 cagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagc 14500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||| || || |||||||||||||||||||||| |||| |||||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 11062441 - 11062357
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatt 117  Q
    ||||||||||||| || ||||||||||||| ||||||||||||  | ||||||||||| ||  |||| |||||| ||||||||||    
T  11062441 agagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttatt 11062357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 29503349 - 29503294
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || ||||||||||||||||||||||||||| |||||| |||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaatac 29503294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 34041582 - 34041641
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| |||||||| || ||||||||||||||||||||||| ||||||| ||| ||||||    
T  34041582 cagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaatac 34041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 19322849 - 19322791
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||| |  ||||||||| ||||||||||||||||| |||||| |||||||    
T  19322849 agagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaatac 19322791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 4438992 - 4439057
Alignment:
Q  52 gaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    |||||||||||||||||||||| |||||||||||  |||| ||| |||| |||||| |||||||||    
T  4438992 gaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttat 4439057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 5147674 - 5147763
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttattaaata 122  Q
    |||||||||| ||||  |||||||||| ||||||| ||||||||||| |||| ||||| ||  || | |||||| |||||||||||||||    
T  5147674 agagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttattaaata 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 7799031 - 7799088
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| ||||| ||| || |||||||||||||||||||  ||||||||||||||    
T  7799031 gagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaatac 7799088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 12086141 - 12086182
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  12086141 agaccttgaggaggagcacacttccaggtcccaagccaatac 12086182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 28194256 - 28194311
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||| || |||||||||| || ||||||||||||| ||||||||||||||    
T  28194256 cagagagaatcgaacctaagaccttaag-aggagcacactccaagatcccaagccaa 28194311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 42922497 - 42922437
Alignment:
Q  33 cagagagaatcaaatctaagacctt-gaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||| |||||||||||||||||||| | ||||||||||||    
T  42922497 cagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaatac 42922437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 19244191 - 19244132
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||| |||||||||||||| ||| ||||||| ||||||    
T  19244191 cagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatac 19244132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 23052521 - 23052576
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || ||||||||||||| ||||||||||||  ||||||||||||||    
T  23052521 gagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaatac 23052576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 38410438 - 38410485
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 84  Q
    ||||||||||  ||||||||| |||||||||||||||| |||||||||    
T  38410438 gagaatcaaacataagacctttaggaggagcacactccgagatcccaa 38410485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 39715070 - 39715015
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||||| |||||||||||||||||||| ||||||| ||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatac 39715015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 118
Target Start/End: Original strand, 16381668 - 16381734
Alignment:
Q  53 accttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatta 118  Q
    |||||||||||||| |||||| ||||||||||||| ||| ||  |||| |||||| |||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggttatta 16381734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 19016109 - 19016031
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||||||  | |||||| |||||||||||||||||||  || |||||||||| |||||| | |||||| |||||||    
T  19016109 gagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 30359718 - 30359680
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    |||||||||||||||||||||||| || |||||||||||    
T  30359718 agaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 30410564 - 30410602
Alignment:
Q  54 ccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||| || ||||||||||||||    
T  30410564 ccttgaggaggagcacactcctaggtcccaagccaatac 30410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 12994388 - 12994429
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||    
T  12994388 agaccttaaggaggagcacactcccaggtcccaagtcaatac 12994429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 45026825 - 45026784
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcc 74  Q
    ||||||||||||||  | ||||||||||||||||||||||||    
T  45026825 cagagagaatcaaacatgagaccttgaggaggagcacactcc 45026784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 8192474 - 8192529
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||| ||||| || || |||||||||| ||||||||||||| ||||||||||||||    
T  8192474 cagagggaatcgaacctgagaccttgag-aggagcacactccaagatcccaagccaa 8192529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 12497777 - 12497813
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcaca 70  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  12497777 agagagaatcgaatctgagaccttgaggaggagcaca 12497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 12517751 - 12517803
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||  | |||||||||||||||||| ||||| || |||||||||||    
T  12517751 gagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaa 12517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 26545919 - 26545863
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||  | |||||| ||| ||||||||||| ||||||||||||| |||||    
T  26545919 agagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaatac 26545863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 14495801 - 14495858
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  14495801 gagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaatac 14495858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 34984888 - 34984829
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||||    
T  34984888 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaatac 34984829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 27596409 - 27596350
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| |||||||||||| ||||||||| |||||| |||||||||||| |||||    
T  27596409 cagagagaatcgaatctaagacctcgaggaggaggacactctcagatcccaagctaatac 27596350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 29075863 - 29075780
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 115  Q
    ||||||||||| ||  | ||| || |||||||||||||||||||||||||||||||||| ||  ||||||||||| ||||||||    
T  29075863 cagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 43442278 - 43442219
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||||||||||||||||||||||||| ||| |||||||    
T  43442278 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaatac 43442219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 88
Target Start/End: Complemental strand, 84888 - 84851
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagcca 88  Q
    ||||||||||||||||||||||||||||||||||||||    
T  84888 agaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 87423 - 87476
Alignment:
Q  39 gaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||| ||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaatac 87476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 14285243 - 14285186
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||||| || || ||||||||||||||||||||||||||| | ||||||||||    
T  14285243 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaat 14285186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 29692382 - 29692439
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| ||| || |||| ||||||||||||||||||||||||||||| |||||||    
T  29692382 gagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaatac 29692439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 30883210 - 30883251
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  30883210 agaccttgaggaggagcacactcccaggtcccaagccaatac 30883251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 7918463 - 7918547
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    ||||||||||| || |||||||||||||||||||  ||||||||| | ||||||||||| ||  |||| |||||| |||||||||    
T  7918463 cagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggttat 7918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 16773889 - 16773830
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||| |||||||||||||||||||| ||||||| ||||||    
T  16773889 cagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatac 16773830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 17028259 - 17028318
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 93  Q
    |||| |||||||| || ||||||||||||||||||||||||||  |||||| ||||||||    
T  17028259 agagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaataca 17028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 18595995 - 18596054
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||| || ||||||||||||||||||||||| |||||| || |||||||||||    
T  18595995 cagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaatac 18596054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 25627139 - 25627080
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||||||||||||||||||||||  | ||||||||||||    
T  25627139 cagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaatac 25627080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 37258360 - 37258419
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || | |||||||||||||||||||||| ||||||||||| |||||    
T  37258360 cagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaatac 37258419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 86
Target Start/End: Original strand, 39327086 - 39327137
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    ||||||||| || |||||||||||||||||||||||||||||  ||||||||    
T  39327086 gagagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaagc 39327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 41165627 - 41165681
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||| ||||    
T  41165627 gagaatcgaatctaagacttcgagaaggagcacactcccagatcccaagctaata 41165681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 16457874 - 16457833
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  16457874 agaccttgaggaggagcacactccaaggtcccaagccaatac 16457833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 22020858 - 22020915
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| ||||| |||| |  |||||||||||||||||||||||||||| |||||    
T  22020858 gagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaatac 22020915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 25979251 - 25979194
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||| || || |||||||||||||||| ||||||||| || |||||||||||    
T  25979251 agagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 115
Target Start/End: Original strand, 8278294 - 8278352
Alignment:
Q  58 gaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 115  Q
    |||||||||||||||||||  ||||||||||||| |||||| | |||||| ||||||||    
T  8278294 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 1410671 - 1410712
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| ||||||||||||||||||| |||||||| ||||||    
T  1410671 agacctcgaggaggagcacactcccatatcccaagtcaatac 1410712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 4793100 - 4793141
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||||||||||||| |||||| |||||||    
T  4793100 agacctcgaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 16436681 - 16436641
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  16436681 agaccttgaggaggagcacactccaag-tcccaagccaatac 16436641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 17761375 - 17761408
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||||| ||||    
T  17761375 aggaggagcacactcccagatcccaagccgatac 17761408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 115
Target Start/End: Original strand, 18989017 - 18989078
Alignment:
Q  55 cttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 115  Q
    ||||| |||||||||||||| || ||||||||||| | ||||| ||||||||| ||||||||    
T  18989017 cttgaagaggagcacactccaaggtcccaagccaacaccatcatgcaaacccaagtgggtta 18989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 21549157 - 21549190
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||| ||||||||||||||    
T  21549157 aggaggagcacactcccaggtcccaagccaatac 21549190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 43230769 - 43230826
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||  ||||| ||| ||| ||||||||||||||| |||| ||||||||||||    
T  43230769 agagagaattgaatctgagatcttaaggaggagcacactctcagaacccaagccaata 43230826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 21086796 - 21086748
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcc 81  Q
    |||||| |||| ||||| ||| |||||||||||||||||| ||||||||    
T  21086796 cagagataatcgaatctgagatcttgaggaggagcacactgccagatcc 21086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 37274453 - 37274510
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  37274453 cagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 37109345 - 37109404
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  37109345 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 37109404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 38869850 - 38869791
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  38869850 cagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 38869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 53496959 - 53496900
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||| |||| |||||||||||||||||||||| |||||| |||||||    
T  53496959 cagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaatac 53496900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 23378037 - 23377980
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||    
T  23378037 agagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 4249259 - 4249200
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| || |||||||||||||||||||||||| | |||||||||| ||||    
T  4249259 cagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctatac 4249200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 7949448 - 7949507
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||||||||||||||||||| || ||||||||||||||    
T  7949448 cagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 7949507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 31759652 - 31759711
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  31759652 cagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaatac 31759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 5450170 - 5450117
Alignment:
Q  38 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||| ||||| | ||||||||||||||||||||||||||| |||||||||||    
T  5450170 agaatcgaatctgaaaccttgaggaggagcacactcccagattccaagccaata 5450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 28635778 - 28635726
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||||||| || |||||||||  |||||||||||||||||||||||||||    
T  28635778 cagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaag 28635726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 51250538 - 51250598
Alignment:
Q  55 cttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||| |||||| |||||||    
T  51250538 cttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 19680782 - 19680841
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || ||||||||||||||| |||||||||||||  |||||||| |||||    
T  19680782 cagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaatac 19680841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 37720227 - 37720290
Alignment:
Q  52 gaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgggtt 114  Q
    ||||||||||||| |||||||||||| |||||||||||| ||| ||||| |||||| |||||||    
T  37720227 gaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 39509148 - 39509097
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 88  Q
    ||||||| || || |||||| |||||||||||||||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 39509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 3743104 - 3743162
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||||| ||||||||| ||||||||||| |||||||  |||||||||| |||||    
T  3743104 cagagagaatcgaatctaagatcttgaggaggaacacactcttagatcccaagtcaata 3743162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 7292793 - 7292851
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || |||| |||||||||||||||||||||| | ||||||||||||    
T  7292793 agagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaatac 7292851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 9241037 - 9241103
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    |||||| ||| ||||||||||| |||||||||||||||||| || ||||| |||||| |||||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 2622389 - 2622446
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||||| || || |||| | |||||||||||||||||||| ||||||||||||    
T  2622389 cagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 19238589 - 19238654
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 115  Q
    |||||| |||||||||||||||||||  ||||||||||||| || ||||| |||||| ||||||||    
T  19238589 agacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggtta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 48480823 - 48480872
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||| |||||| |||||||||||||||| ||||||| ||||||||||    
T  48480823 agagaattaaatctgagaccttgaggaggaggacactccaagatcccaag 48480872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 49576890 - 49576947
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaatac 49576947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 8714758 - 8714702
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| | ||||||||||||| ||| ||| |||||||||| |||||||    
T  8714758 agagaatcaaatctgaaaccttgaggaggaacacgctctcagatcccaaaccaatac 8714702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 116
Target Start/End: Complemental strand, 46545793 - 46545709
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    |||||| |||| ||||| ||| ||||||||||||||||||| ||| || |||||||||| ||  |||| |||||| |||||||||    
T  46545793 cagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggttat 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 1730483 - 1730542
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||  ||||| |||| |||| ||||||||||||| ||| ||||||||||||||    
T  1730483 cagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaatac 1730542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 11592147 - 11592206
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||| || ||||||||| |||||||||||||||| ||| ||||||| ||||||    
T  11592147 cagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaatac 11592206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 12822043 - 12821992
Alignment:
Q  40 aatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||| ||||| |||||||||  |||||||||||||||||||||||| |||||    
T  12822043 aatcgaatctgagaccttgaacaggagcacactcccagatcccaagtcaata 12821992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 30938217 - 30938272
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||||| ||||||||||||||||| ||||||||| |||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaatac 30938272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 40283985 - 40284060
Alignment:
Q  38 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 112  Q
    ||||||||| || |||||||||||||  |||||||||||  ||||||||||||| ||||| || |||||| |||||    
T  40283985 agaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 52880224 - 52880165
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||| | | || |||||||||    
T  52880224 cagagagaatcaaatctaaaaccttgaggagaagcacacccccgggttcctagccaatac 52880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 13265103 - 13265161
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| ||||| | ||| | |||||||||||| |||||| ||||||||||||||    
T  13265103 agagagaatcgaatctgaaaccataaggaggagcacattcccaggtcccaagccaatac 13265161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 32992676 - 32992638
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    |||||||||||||||||||||||| || |||||||||||    
T  32992676 agaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 87
Target Start/End: Complemental strand, 46329226 - 46329192
Alignment:
Q  53 accttgaggaggagcacactcccagatcccaagcc 87  Q
    ||||||||||||||||||||||||| |||||||||    
T  46329226 accttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 47202435 - 47202473
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  47202435 agaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 55427198 - 55427276
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||| || || |||||| ||| ||||||| |||||||| ||||||||||||| || ||||| |||||| |||||||    
T  55427198 gagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 8030216 - 8030257
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||  ||||||||| ||||    
T  8030216 agaccttgaggaggagcacactcccaagtcccaagcctatac 8030257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 14451755 - 14451792
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    |||||||||||||||||||||||||| || ||||||||    
T  14451755 ctaagaccttgaggaggagcacactctcatatcccaag 14451792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 15180820 - 15180764
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || |||||||||||||||| |   ||||||||| ||||||||||||||    
T  15180820 cagagagaatcgaacctaagaccttgaggagta---cactcccaggtcccaagccaatac 15180764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 16581757 - 16581716
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||| |||||||| | ||||||||||||    
T  16581757 agaccttgaggaggagcagactcccaggttccaagccaatac 16581716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 17618345 - 17618304
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||||||||||||| || |||||||||||    
T  17618345 agacctcgaggaggagcacactcccaggtctcaagccaatac 17618304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 31826673 - 31826632
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||| || |||||||||| ||||    
T  31826673 agaccttgaggaggagcacactcgcaaatcccaagcctatac 31826632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 38838877 - 38838824
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 88  Q
    ||||||||| || ||||||||||||||||||||| ||||| ||| | |||||||    
T  38838877 gagagaatcgaacctaagaccttgaggaggagcatactccaagagctcaagcca 38838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 7093450 - 7093395
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||| || |||| |||||||  ||||||||||||| ||||||||||||||    
T  7093450 cagagagaatcgaacctaaaaccttgaa-aggagcacactccaagatcccaagccaa 7093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 8325377 - 8325429
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||| || ||||||||||||||| ||||||||||| || || ||||||||    
T  8325377 gagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaa 8325429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 21344880 - 21344817
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||||||| ||||||||||||| || ||||||||||| | |||||||| |||||| |||||||    
T  21344880 agaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggtt 21344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 33619285 - 33619229
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || |||||||||  ||||||| ||| ||||||||||| ||||||||||    
T  33619285 agagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaatac 33619229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 33632149 - 33632189
Alignment:
Q  52 gaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||| ||||||| || ||||||||||||    
T  33632149 gaccttgaggaggagcatactcccatattccaagccaatac 33632189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 46295175 - 46295123
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||| || || |||||||||||||||||||||||| |  |||||||||||    
T  46295175 gagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 47044795 - 47044715
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    ||||||| || || |||||| ||||||||||| |||| ||||||||||| ||||| || ||||| || ||| |||||||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 15786317 - 15786373
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  15786317 agagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 8177176 - 8177235
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || | ||||||||||||||||||||||||||||||||||||||||    
T  8177176 cagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 8177235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 10526905 - 10526846
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  10526905 cagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaatac 10526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 33700767 - 33700826
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||    
T  33700767 cagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaatac 33700826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 114
Target Start/End: Complemental strand, 41508907 - 41508831
Alignment:
Q  39 gaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||| || || ||||| |||||| |||||||    
T  41508907 gaattaaatctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 51814574 - 51814494
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||||| || || ||||||||||||||||||||||| |||||| |||| ||||| |||||||| |||||| |||||||    
T  51814574 gagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 2799944 - 2799885
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||||||||||||||||||||||||| |||||| ||||    
T  2799944 cagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctatac 2799885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 18459227 - 18459282
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  18459227 gagagaatcaaatctaagacctcaaggaggagcacactcccaagtcccaagccaat 18459282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 21267987 - 21268046
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||||||    
T  21267987 cagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatac 21268046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 36371552 - 36371493
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||||||||||||||||||||||| | ||||||||||||    
T  36371552 cagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaatac 36371493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 92
Target Start/End: Original strand, 44046162 - 44046201
Alignment:
Q  53 accttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaatac 44046201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 19528325 - 19528403
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||| || || |||||||||||||||||||||||  |||||||||||||||| || ||||| |||||| |||||||    
T  19528325 gagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 9964518 - 9964441
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgg 111  Q
    |||| ||||||| || |||| ||||||| |||||||||||||||||||||| |||| ||||||||| |||||| ||||    
T  9964518 gagataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 9165189 - 9165273
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    ||||||||||  || || |||| |||||||||||||||||||||| ||||||||||||| ||  |||| |||||| |||||||||    
T  9165189 cagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 113
Target Start/End: Complemental strand, 44126476 - 44126396
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggt 113  Q
    |||||||||||||||| |||||| | |||||||||||||||||| ||||| | ||||| || ||||| |||||| ||||||    
T  44126476 agagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 6650677 - 6650618
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||| ||||||||||||| |||||| ||||||||||||||||    
T  6650677 cagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaatac 6650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 9643815 - 9643862
Alignment:
Q  45 aatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| |||||||||||| || ||||||||||||||||||||||||||    
T  9643815 aatctgagaccttgaggatgaacacactcccagatcccaagccaatac 9643862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 51703861 - 51703802
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || | || |||||||||||||||||||||||| ||||||||||||    
T  51703861 cagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaatac 51703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 52336768 - 52336827
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||| || || ||| ||| ||||||||||||||||||||||||||||||||||    
T  52336768 cagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatac 52336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 4566630 - 4566572
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||||| || || ||||| ||||||||||||||||||||| | |||||||||||    
T  4566630 cagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaata 4566572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 11063637 - 11063579
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || |||||||||||||||||| ||||||  ||| ||||||||||||||    
T  11063637 agagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaatac 11063579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 31794276 - 31794317
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaatac 31794317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 4825049 - 4824997
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    |||||||||| || ||||||||| |||||||||||||| || |||||||||||    
T  4825049 gagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaa 4824997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 12587350 - 12587294
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||| || || |||||| |||||||||||||||| ||||||||||| |||||    
T  12587350 gagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 22049822 - 22049874
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||||||| ||||| | ||||||||||| ||||||||| |||||||||||    
T  22049822 cagagagaatcgaatctcaaaccttgaggagaagcacactctcagatcccaag 22049874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 40257463 - 40257399
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||| |||||||||||||||||||| || |||||||||| || ||||| |||||| |||||||    
T  40257463 agacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 3266006 - 3265963
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactccca 76  Q
    ||||||||||| || || ||||||||||||||||||||||||||    
T  3266006 cagagagaatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 8904496 - 8904437
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| ||  | ||||||||||||||||||||||| || |||||||| ||||||    
T  8904496 cagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatac 8904437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 86
Target Start/End: Complemental strand, 12370243 - 12370192
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    ||||||||||||  | |||||| |||||||||||||||||||| ||||||||    
T  12370243 gagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 25297850 - 25297795
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || |||||| |||||||||||||||| ||||||| ||| ||||||    
T  25297850 gagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaatac 25297795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 40810549 - 40810498
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 84  Q
    ||||||||||| || || ||||||||| ||||| ||||||||||||||||||    
T  40810549 cagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaa 40810498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 50901662 - 50901607
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||| ||| | |||||| ||||||||||||||| |||| ||||||||||||    
T  50901662 gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 6122875 - 6122817
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| ||||| || || ||||||||||||||||||||||||||  ||||||||| ||||    
T  6122875 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 6122817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 16169992 - 16170054
Alignment:
Q  53 accttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||||||||| ||||||||||| ||||||| ||||| || ||||| |||||| |||||||    
T  16169992 accttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 17439997 - 17439951
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcc 81  Q
    ||||||||||||  | |||||| ||||||||||||||||||||||||    
T  17439997 gagagaatcaaacatgagacctcgaggaggagcacactcccagatcc 17439951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 31049695 - 31049637
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||||| ||  | ||| ||| |||||||||||||||| ||||||||||||||||    
T  31049695 cagagagaatcgaagatgagatctttaggaggagcacactcctagatcccaagccaata 31049637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 86
Target Start/End: Complemental strand, 17297062 - 17297013
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    ||||||||||  | |||||||||||||||||||||||| || ||||||||    
T  17297062 gagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 31383818 - 31383851
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||| ||||||||||||||    
T  31383818 aggaggagcacactcccaggtcccaagccaatac 31383851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 47753778 - 47753737
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||| ||| |||||||||| ||||||    
T  47753778 agaccttgaggaggagcacagtcctagatcccaagtcaatac 47753737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 51281431 - 51281394
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacact 72  Q
    |||||||||||| || ||||||||||||||||||||||    
T  51281431 gagagaatcaaacctgagaccttgaggaggagcacact 51281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 52116793 - 52116834
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||||||||||||||||||||  ||||||||||||||    
T  52116793 agacattgaggaggagcacactcccaagtcccaagccaatac 52116834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 952589 - 952537
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||| || || |||| ||||||| |||||||||||||| |||||||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaa 952537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 77
Target Start/End: Complemental strand, 1247195 - 1247151
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccag 77  Q
    ||||||||||| || || |||||||||||||||| ||||||||||    
T  1247195 cagagagaatcgaacctgagaccttgaggaggagtacactcccag 1247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 24730447 - 24730407
Alignment:
Q  52 gaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| |||||||||||||||||||| |||| ||||||    
T  24730447 gaccttgaagaggagcacactcccagatctcaagacaatac 24730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 39714777 - 39714828
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||  | |||||||||| ||||||||||||| ||||||||||||||    
T  39714777 gagaatcaaacttgagaccttgag-aggagcacactccaagatcccaagccaa 39714828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 48615341 - 48615389
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||||||| | | |||||||| |||||||||||||||||| |||||    
T  48615341 gagaatcaaatttgaaaccttgagaaggagcacactcccagattccaag 48615389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 11610 - 11551
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||| |||||||||||||||||||||||||||||||||||    
T  11610 cagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaatac 11551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 26459404 - 26459463
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  26459404 cagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 26459463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 117
Target Start/End: Complemental strand, 18363777 - 18363693
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatt 117  Q
    ||||||||||||| || |||||||||||||||||||||||||| ||| |||||| ||| ||  |||| |||||| ||||||||||    
T  18363777 agagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttatt 18363693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 17041008 - 17041063
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||| || || |||||||||||||||||||||| |||||||||||||||||    
T  17041008 gagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaat 17041063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 51 - 112
Target Start/End: Complemental strand, 21854612 - 21854550
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 112  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||    
T  21854612 agactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 43215265 - 43215207
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || |||||||||||||||||||||||| || ||||||||||||||    
T  43215265 agagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 43215207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 5273586 - 5273666
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||| ||||||| ||||||||||||||||||||||||||  || ||||||||||| | || ||||| |||||| |||||||    
T  5273586 gagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtgggtt 5273666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 30442567 - 30442511
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || || |||||||||||||||||| |||||||| ||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaatac 30442511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 31706504 - 31706448
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| ||||||||||||| || |||||||||||||| |||||| |||||||    
T  31706504 agagaatcaagtctaagaccttgacgatgagcacactcccaggtcccaaaccaatac 31706448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 7744106 - 7744165
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||| || |||||||||||||||||| | |||||||||| ||||| ||||    
T  7744106 cagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctatac 7744165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 115
Target Start/End: Complemental strand, 15137635 - 15137552
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 115  Q
    ||||||||||| || || |||||||||||||||||||||||| | |||||||| || || || ||||| |||||| ||||||||    
T  15137635 cagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtgggtta 15137552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 22760941 - 22760886
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || ||||||||||||||||||||||||||| ||||||| ||||||    
T  22760941 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaatac 22760886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 116
Target Start/End: Complemental strand, 39631925 - 39631842
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 116  Q
    |||||||||| || || |||||||||||||||||  |||||||| ||||||||||||| ||  |||| |||||| |||||||||    
T  39631925 agagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 9608624 - 9608682
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || ||| |||||||||||| |||||||||||||||||||| ||||    
T  9608624 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctatac 9608682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 9836196 - 9836254
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || ||| |||||||||||| |||||||||||||||||||| ||||    
T  9836196 agagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctatac 9836254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 9871280 - 9871334
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcc 87  Q
    ||||||||||| ||||| |||| | ||||||||||||||||||| ||||||||||    
T  9871280 cagagagaatcgaatctgagacttcgaggaggagcacactcccaaatcccaagcc 9871334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 84
Target Start/End: Complemental strand, 37094830 - 37094780
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 84  Q
    |||||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  37094830 agagagaatcaaatgtgagaccttgaggaggatcacacttccagatcccaa 37094780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 23552199 - 23552142
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||| ||  | ||||||||||||||||||||||||||| ||||||| |||||    
T  23552199 agagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaata 23552142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 25021347 - 25021388
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  25021347 agactttgaggaggagcacactcccaggtcccaagccaatac 25021388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 25590675 - 25590634
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  25590675 agacctcgaggaggagcacactcccagatctcaagccaatac 25590634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 29385740 - 29385793
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||| || |||||||||||||||||||||||| |  |||||||||||    
T  29385740 agagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaa 29385793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 29785313 - 29785354
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  29785313 agaccttgaggaggagcacacttccagatcccaagcctatac 29785354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 48771994 - 48771961
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||||||||||    
T  48771994 aggaggagcacactcccagatcccaagccaatac 48771961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 5579232 - 5579284
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    |||| ||||| || |||||||||||||||||||||||| || |||||||||||    
T  5579232 gagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaa 5579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 92
Target Start/End: Complemental strand, 19553520 - 19553477
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||||||||||||| | ||||||||||||    
T  19553520 ctaagaccttgaggaggagcacactcccaggt-ccaagccaatac 19553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 26703189 - 26703149
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  26703189 agacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 37233584 - 37233624
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  37233584 agaccttaaggaggagcacactcccacatcccaagccaata 37233624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 38374597 - 38374649
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||| || ||||||||||||||||||||||||||  || |||||||||||    
T  38374597 gagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaa 38374649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 42836016 - 42836080
Alignment:
Q  54 ccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatt 117  Q
    ||||||||| |||||||||||||| ||||||||||||| ||  |||| |||||| ||||||||||    
T  42836016 ccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttatt 42836080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 7721451 - 7721392
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| ||  | |||||||||||||||| |||||||||| |||||| |||||||    
T  7721451 cagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaatac 7721392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 11720958 - 11721013
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| ||||| | ||||| |||||||||||| |||||| ||||||||||||||    
T  11720958 gagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaatac 11721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 20335829 - 20335884
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||||| |||||||||||||||||||  ||||||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatac 20335884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 25655222 - 25655281
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || | ||||||||||||| ||||||| ||||||||||| ||||||    
T  25655222 cagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaatac 25655281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 33222452 - 33222393
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||||||| ||| ||||| |||| ||||||||||||||    
T  33222452 cagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaatac 33222393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 41519258 - 41519317
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| | || || |||||||||||||||||||||||| | |||||||| ||||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaatac 41519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 85
Target Start/End: Original strand, 42262090 - 42262141
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    |||||||||  ||||| ||||||| ||||||||||||||| |||||||||||    
T  42262090 agagagaattgaatctgagacctttaggaggagcacactctcagatcccaag 42262141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 43590985 - 43590930
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||| |||||||||||||||||||||  ||||||||||||||    
T  43590985 gagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaatac 43590930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 89
Target Start/End: Complemental strand, 5934177 - 5934147
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaa 89  Q
    |||||||||||||||||||||||||||||||    
T  5934177 aggaggagcacactcccagatcccaagccaa 5934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 30579417 - 30579335
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||| |||| || || |||||||||||||| | |||||||||| || |||||||||| || ||||| |||||| |||||||    
T  30579417 cagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 2446365 - 2446308
Alignment:
Q  58 gaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||||||||||||||||  ||||||||||||| |||||| | |||||| |||||||    
T  2446365 gaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 3280497 - 3280538
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||| | | ||||||||||||||    
T  3280497 agaccttgaggaggagcacactctcgggtcccaagccaatac 3280538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 7801244 - 7801203
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  7801244 agaccttgaagaggagcacactcccaggtcccaagtcaatac 7801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 15905693 - 15905726
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||| ||||||||||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaatac 15905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 20952145 - 20952202
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||| ||||| |||  |||||||||||||||||||||| |||||| |||||||    
T  20952145 gagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaatac 20952202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 28236593 - 28236634
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||| ||||||||| ||||||||||||||    
T  28236593 agacctcgaggaggagcgcactcccaggtcccaagccaatac 28236634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 45709720 - 45709761
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||||||||| |||||||||||| |||||    
T  45709720 agacctcgaggaggagcacactctcagatcccaagctaatac 45709761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 93
Target Start/End: Complemental strand, 17113877 - 17113817
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 93  Q
    ||||||||||| ||  | ||||||||||||| ||||||||||||| | | |||||||||||    
T  17113877 cagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaataca 17113817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 25956302 - 25956345
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||    
T  25956302 ctaagaccttgag-aggagcacactccaaggtcccaagccaatac 25956345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 30217943 - 30217903
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  30217943 agaccttgaggaggagcacacttccagatatcaagccaata 30217903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 31835256 - 31835192
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||||||||||||||||||||| ||  |||||||||| | || ||||| |||||| |||||||    
T  31835256 agaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 33869439 - 33869523
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac-atcaggcaaacccatgtgggttat 116  Q
    ||||||||||| || |  |||||||||| ||||||||||| |||| || ||||||||||| |  |||| |||||| |||||||||    
T  33869439 cagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggttat 33869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 13042 - 13099
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || |||||||||||||||||||||||||||||| |||||||||||    
T  13042 gagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaatac 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 35690058 - 35690117
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||||||||||||| || ||||||||||||||||||||    
T  35690058 cagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaatac 35690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 968442 - 968385
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  968442 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 968385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 2203556 - 2203515
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  2203556 agaccttgaggaggagcacactcccaggtcccaagccaatac 2203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 3624660 - 3624603
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || ||||||||| ||||||||||||||||| ||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaatac 3624603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 7140789 - 7140732
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| ||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  7140789 gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaatac 7140732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 11492070 - 11492126
Alignment:
Q  36 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||| || ||||||||| ||| ||||||||||||||||||| |||||||||||    
T  11492070 agagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatac 11492126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 11793520 - 11793568
Alignment:
Q  38 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 86  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  11793520 agaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagc 11793568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 44780109 - 44780165
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    |||| |||||||| || ||||||||||||||||||||||||||  ||||||||||||    
T  44780109 agagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 3305182 - 3305241
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||| ||| | ||||||||||||||||||| |||||||||||||| |||||||    
T  3305182 cagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaatac 3305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 6536602 - 6536543
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||  || || |||||||||||||||||||||||| || ||||||||||||||    
T  6536602 cagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatac 6536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Complemental strand, 16852418 - 16852363
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  16852418 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 16852363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 18540380 - 18540321
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||||||||||| || |||||||||| ||||||||||||||    
T  18540380 cagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaatac 18540321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 19703485 - 19703540
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || ||||||||||||||||||||||| ||| ||||||||||||||    
T  19703485 gagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaatac 19703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 23361643 - 23361702
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||  || || |||||||||||||||||||||||||| |||||||| ||||||    
T  23361643 cagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaatac 23361702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 22193360 - 22193402
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccag 77  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccag 22193402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 33017296 - 33017238
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||||| || || |||||||||||||||||||||| |||| | |||||||||||    
T  33017296 cagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 3524410 - 3524451
Alignment:
Q  48 ctaagaccttgaggaggagcacactcccagatcccaagccaa 89  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  3524410 ctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 28783124 - 28783083
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  28783124 agaccttgaggaggagcacactcccaggtctcaagccaatac 28783083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 36205259 - 36205198
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgg 111  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||| | |||||| ||||    
T  36205259 agaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 91
Target Start/End: Original strand, 6569791 - 6569823
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||||||||||||||||||||||||||    
T  6569791 aggaggagcacactcccagatcccaagccaata 6569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 26688929 - 26688865
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||||||||||||||||||||| || ||||||||||| | || ||||| |||||| |||||||    
T  26688929 agaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 34628722 - 34628666
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||||| || || |||| |||||||| | |||||||||||||||||||||||||    
T  34628722 gagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaata 34628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 6436549 - 6436608
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| ||||| ||||| |||||||| ||||||||||||||| |  ||||||||||||||    
T  6436549 cagagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaatac 6436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 8794339 - 8794398
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || ||||| |||||||||||||||| |||| | ||||||||||||    
T  8794339 cagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaatac 8794398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 92
Target Start/End: Original strand, 30483902 - 30483937
Alignment:
Q  57 tgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||| |||||||||||||||    
T  30483902 tgaggaggagcacactcccatatcccaagccaatac 30483937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 11819857 - 11819799
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| ||||| || || ||||||||||||||||||||||||||  ||||||||| ||||    
T  11819857 agagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 11819799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 92
Target Start/End: Complemental strand, 27750811 - 27750753
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| ||||| || || ||||||||||||||||||||||||||  ||||||||| ||||    
T  27750811 agagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 27750753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 4436055 - 4435998
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| | ||| ||||||||||||||||||| ||||||  || |||||||||||    
T  4436055 gagagaatcgagtctgagaccttgaggaggagcactctcccatgtctcaagccaatac 4435998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Complemental strand, 12281574 - 12281517
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||| ||||| |||||| ||||||| |||||||| ||| ||||||||||||||    
T  12281574 gagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagccaatac 12281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 82
Target Start/End: Original strand, 24675506 - 24675555
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatccc 82  Q
    |||||| |||| ||||| |||||||||| |||||||||||| ||||||||    
T  24675506 cagagaaaatcgaatctgagaccttgagaaggagcacactctcagatccc 24675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 29858061 - 29858102
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||| |||||||||||||||||| | ||||||||||||||    
T  29858061 agacctcgaggaggagcacactccctggtcccaagccaatac 29858102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 30774732 - 30774789
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||| |||| ||||| |||||| |||||||| |||||| ||||||||||| |||||||    
T  30774732 gagaaaatcgaatctgagacctcgaggaggaacacacttccagatcccaaaccaatac 30774789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 40136961 - 40137017
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacat 94  Q
    |||||||||| || |||||||||| ||||||||||||| || ||||||||||| ||||    
T  40136961 gagaatcaaacctgagaccttgag-aggagcacactccaaggtcccaagccaacacat 40137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 43594313 - 43594370
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    |||||||||| || || ||||||||||||||| |||| ||| |||||| |||||||||    
T  43594313 agagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaata 43594370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 8059696 - 8059632
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||||||||||| ||||||| || || ||||| ||||| |||||||| |||||| |||||||    
T  8059696 agaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 18128591 - 18128540
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 85  Q
    ||||||||||| |||||||||||||||  ||||||||||| | ||||||||||    
T  18128591 cagagagaatcgaatctaagaccttga-aaggagcacacttcaagatcccaag 18128540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 15319 - 15376
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  15319 gagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 15376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 18381 - 18324
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    |||||||||||||| || | |||||||||||||||||| |||||||| ||||||||||    
T  18381 cagagagaatcaaacctgaaaccttgaggaggagcacaatcccagattccaagccaat 18324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 10299 - 10219
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    ||||||||||||  |||||| | ||||||  || ||||||||||||||||||||||| |||||||| |||||| |||||||    
T  10299 gagagaatcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaacccaagtgggtt 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 2468 - 2523
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||| || || ||||||||||||||||||||||||||||||| || |||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaatac 2523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 19956 - 20015
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||| || || |||||||||||||||||| |||||||| | ||||||||||||    
T  19956 cagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaatac 20015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 92
Target Start/End: Original strand, 835 - 893
Alignment:
Q  34 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| || || |||| | ||||||||||||| |||||||||||||||||||||    
T  835 agagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaatac 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 81562 - 81616
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 91  Q
    ||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||    
T  81562 gagaatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaata 81616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 92
Target Start/End: Original strand, 94983 - 95024
Alignment:
Q  51 agaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||||||||||||||||||| | ||||||||||||    
T  94983 agaccttgaggaggagcacactcccaggttccaagccaatac 95024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 157000 - 157040
Alignment:
Q  52 gaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaatac 157040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 15775 - 15830
Alignment:
Q  37 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    ||||||||||  | |||||||||||||||||| ||||| | |||||||||||||||    
T  15775 gagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaatac 15830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 35399 - 35442
Alignment:
Q  49 taagaccttgaggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||    
T  35399 taagaccttgaggaggagcatactcctagattccaagccaatac 35442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 5275 - 5218
Alignment:
Q  33 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 90  Q
    ||||||||||| || |||| || || ||||||||||||||||||  ||||||||||||    
T  5275 cagagagaatcgaacctaaaactttaaggaggagcacactcccaagtcccaagccaat 5218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 92
Target Start/End: Original strand, 19867 - 19900
Alignment:
Q  59 aggaggagcacactcccagatcccaagccaatac 92  Q
    |||||||||| |||||||||||||||||||||||    
T  19867 aggaggagcagactcccagatcccaagccaatac 19900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 114
Target Start/End: Original strand, 14987 - 15047
Alignment:
Q  55 cttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 114  Q
    |||||||||||||| |||||||| ||| ||||||||| |||||| | |||||| |||||||    
T  14987 cttgaggaggagcatactcccagttcctaagccaatagcatcagactaacccaagtgggtt 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 112362 - 112282
Alignment:
Q  35 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac-atcaggcaaacccatgtgggtt 114  Q
    ||||||||| || || ||||||  | ||||| ||||||||||||| |||||||||||| | ||||| |||||| |||||||    
T  112362 gagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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