View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19678_low_13 (Length: 556)

Name: NF19678_low_13
Description: NF19678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19678_low_13
NF19678_low_13
[»] chr6 (11 HSPs)
chr6 (9-425)||(9929987-9930403)
chr6 (31-236)||(9962625-9962831)
chr6 (24-236)||(9930412-9930625)
chr6 (8-236)||(9962388-9962617)
chr6 (435-552)||(9929292-9929410)
chr6 (1-58)||(9962330-9962387)
chr6 (431-498)||(30525813-30525881)
chr6 (435-517)||(33192023-33192107)
chr6 (435-517)||(29389157-29389240)
chr6 (435-506)||(18075519-18075590)
chr6 (445-511)||(33450843-33450910)
[»] chr5 (8 HSPs)
chr5 (236-425)||(40018456-40018635)
chr5 (432-519)||(17223098-17223186)
chr5 (432-506)||(28503237-28503311)
chr5 (435-508)||(22017651-22017725)
chr5 (432-482)||(40491744-40491794)
chr5 (436-482)||(23994352-23994398)
chr5 (479-537)||(27549737-27549795)
chr5 (237-313)||(36347919-36347995)
[»] chr2 (9 HSPs)
chr2 (316-417)||(186769-186870)
chr2 (385-425)||(186873-186913)
chr2 (437-511)||(24510934-24511008)
chr2 (435-511)||(43050152-43050228)
chr2 (236-311)||(37058131-37058206)
chr2 (450-519)||(23046573-23046642)
chr2 (432-509)||(38308068-38308146)
chr2 (467-516)||(42346914-42346963)
chr2 (432-511)||(13019641-13019721)
[»] chr1 (4 HSPs)
chr1 (431-516)||(2749176-2749261)
chr1 (462-547)||(32556519-32556604)
chr1 (432-517)||(50549215-50549298)
chr1 (236-313)||(7013138-7013215)
[»] chr4 (7 HSPs)
chr4 (432-547)||(45195749-45195864)
chr4 (435-539)||(12311813-12311918)
chr4 (437-498)||(39791253-39791314)
chr4 (435-517)||(55193496-55193579)
chr4 (455-511)||(41858193-41858249)
chr4 (235-311)||(45042101-45042177)
chr4 (431-506)||(53689049-53689125)
[»] scaffold0071 (1 HSPs)
scaffold0071 (437-539)||(56-158)
[»] chr8 (8 HSPs)
chr8 (435-517)||(13818776-13818858)
chr8 (437-519)||(7632685-7632768)
chr8 (431-498)||(37507589-37507656)
chr8 (432-512)||(39555896-39555975)
chr8 (455-517)||(37325116-37325178)
chr8 (478-527)||(7685453-7685502)
chr8 (432-476)||(4656570-4656614)
chr8 (470-510)||(24209920-24209960)
[»] chr3 (9 HSPs)
chr3 (437-539)||(15462034-15462136)
chr3 (435-510)||(22318226-22318301)
chr3 (448-511)||(51715050-51715113)
chr3 (436-517)||(20704962-20705044)
chr3 (438-507)||(33995656-33995725)
chr3 (433-482)||(42110959-42111008)
chr3 (432-517)||(1750100-1750186)
chr3 (436-510)||(31219209-31219282)
chr3 (236-309)||(49304090-49304163)
[»] chr7 (5 HSPs)
chr7 (236-311)||(39294919-39294994)
chr7 (432-506)||(35424875-35424949)
chr7 (455-520)||(16377903-16377968)
chr7 (236-310)||(20188236-20188310)
chr7 (432-517)||(17115916-17116002)
[»] scaffold0110 (1 HSPs)
scaffold0110 (435-497)||(6459-6522)
[»] scaffold1669 (1 HSPs)
scaffold1669 (239-303)||(504-568)


Alignment Details
Target: chr6 (Bit Score: 329; Significance: 0; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 9 - 425
Target Start/End: Complemental strand, 9930403 - 9929987
Alignment:
Q  9 aaggtccattaataagtttatgatatagcctcacaacggaattgcaattaataaccgttcagcagcgagcaacaattaactattactcagcaacgaacgc 108  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||  |||||||||||||||||||||| |||| |||||||||||||||||||||||||||     
T  9930403 aaggtccattaataagtttctgatatagcttcacagcggaataacaattaataaccgttcagcagcaagcatcaattaactattactcagcaacgaacgg 9930304  T
Q  109 taatcaattgtcgttggggaattttggttacttcaaaggtatttgtgatcaaagcataggtgtctaaagagcaaattttctatcaaatggattttattta 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9930303 taatcaattgtcgttggggaattttggttacttcaaaggtatttgtgatcaaagcataggtgtctaaagatcaaattttctatcaaatggattttattta 9930204  T
Q  209 gaaagtgggccttttaatgtttgattggaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaa 308  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||| |||||||||||  ||||||||||||||    
T  9930203 gaaagtgggccttttaatgtttgattggaattctgctctccacccagcacaaaatactcgcgccctgcagccatgcccaaaatgtccatgcgctacttaa 9930104  T
Q  309 ctaacactaactcacgctagttttggtttcacctatattgagcaatgagcgccaaaattgagagaggtgagccccaaaattttattttatgaattagtac 408  Q
    ||||| |||| |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9930103 ctaacgctaattcacactagttttgttttcacctatattgagcaatgagcaccaaaattgagagaggtgagcaccaaaattttattttatgaattagtac 9930004  T
Q  409 aatttagacgtaagtga 425  Q
    |||||||||||||||||    
T  9930003 aatttagacgtaagtga 9929987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 9962831 - 9962625
Alignment:
Q  31 atatagcctcacaacggaattgcaattaataaccgttcagcagcgagcaacaattaactattactcagcaacgaacgctaatcaattgtcgttggggaat 130  Q
    |||||| |||| ||| |||| |||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| |||| ||||||| ||||  |||    
T  9962831 atatagtctcataacagaatagcaattaataaccgtttagcagcgagcgacaattaattattactcagcaacgaacggtaattaattgtcattggaaaat 9962732  T
Q  131 tttggttacttcaaaggtatttgtgatcaaagcataggtgtctaaagagcaaattttctat--caaatggattttatttagaaagtgggccttttaatgt 228  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  9962731 tttggttacttc-aaggtatttgcgatcaaagcataggtgtctaaagagcaaattttctattacaactggattttatttagaaagtgggccttttaatgt 9962633  T
Q  229 ttgattgg 236  Q
    ||||||||    
T  9962632 ttgattgg 9962625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 24 - 236
Target Start/End: Complemental strand, 9930625 - 9930412
Alignment:
Q  24 gtttatgatatagcctcacaacggaattgcaattaataaccgttcagcagcgagcaacaattaactattactcagcaacgaacgctaatcaattgtcgtt 123  Q
    |||| ||||||||||||||||| ||||  ||||||||||| ||| |||||||||| |||||||| ||||||||||||||||||| |||| ||||||| ||    
T  9930625 gtttctgatatagcctcacaacagaatatcaattaataactgtttagcagcgagcgacaattaattattactcagcaacgaacggtaattaattgtcatt 9930526  T
Q  124 ggggaattttggttacttcaaaggtatttgtgatcaaagcataggtgtctaaagagcaaattttctat--caaatggattttatttagaaagtgggcctt 221  Q
    || |||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||    
T  9930525 ggagaattttggttacttc-aacgtatttgcgatcaaagcataggtgtctaaagagcaaattttctattacaactggattttatttagaaagtgggcctt 9930427  T
Q  222 ttaatgtttgattgg 236  Q
    |||||| ||||||||    
T  9930426 ttaatgattgattgg 9930412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 8 - 236
Target Start/End: Complemental strand, 9962617 - 9962388
Alignment:
Q  8 aaaggtccattaataagtttatgatatagcctcacaacggaattgcaattaataaccgttcagcagcgagcaacaattaactattactcagcaacgaacg 107  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||  |||| |||||| |||||||||| |||| |||||||||||||||||||||||||||    
T  9962617 aaaggtccattaataagtttctgatatagcttcacaacagaataacaataaataactgttcagcagcaagcatcaattaactattactcagcaacgaacg 9962518  T
Q  108 ctaatcaattgtcgttggggaattttggttacttcaaaggtatttgtgatcaaagcataggtgtctaaagagcaaattttctat--caaatggattttat 205  Q
     |||| |||| ||||||     ||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  9962517 ataattaattatcgttgaaattttttggttacttc-aaggtatttgcgatcaaagcataggtgtcaaaagagcaaattttctattacaaatggattttat 9962419  T
Q  206 ttagaaagtgggccttttaatgtttgattgg 236  Q
    ||| ||||||| |||||||||||||||||||    
T  9962418 ttacaaagtggaccttttaatgtttgattgg 9962388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 435 - 552
Target Start/End: Complemental strand, 9929410 - 9929292
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacatactc 534  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  9929410 ggattatagaattcgaacgtcataaacacctcataaaaacctccaaaacacgttgaaagatttcagattttaaaatctaaataggaggtgcgacatactc 9929311  T
Q  535 ataggat-aaaaaagtaat 552  Q
    ||||||| |||||||||||    
T  9929310 ataggatgaaaaaagtaat 9929292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9962387 - 9962330
Alignment:
Q  1 gataactaaaggtccattaataagtttatgatatagcctcacaacggaattgcaatta 58  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9962387 gataactaaaggtccattaataagtttatgatatagcctcacaacggaatagcaatta 9962330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 431 - 498
Target Start/End: Original strand, 30525813 - 30525881
Alignment:
Q  431 atttggattatagaatccgaacatcataaacacctcataaaaacctcc-aaaatacgttgaaagatttc 498  Q
    ||||||||||||||||||||||  |||||||| ||||||||||||||| |||| ||||||||| |||||    
T  30525813 atttggattatagaatccgaacggcataaacatctcataaaaacctccaaaaacacgttgaaacatttc 30525881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 435 - 517
Target Start/End: Complemental strand, 33192107 - 33192023
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaa--tacgttgaaagatttcaaattttaaaatctaaata 517  Q
    |||||||| |||||||||  ||||||||| ||||||||| || |||||  |||||||||| |||||  |||||||||||||||||    
T  33192107 ggattataaaatccgaacggcataaacacttcataaaaatcttcaaaaattacgttgaaatatttcggattttaaaatctaaata 33192023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 517
Target Start/End: Original strand, 29389157 - 29389240
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaat-acgttgaaagatttcaaattttaaaatctaaata 517  Q
    |||||||| |||||||||| ||||||||||  |||||||||| |||||  ||||||||| |||||  |||||||||||| ||||    
T  29389157 ggattataaaatccgaacagcataaacacccaataaaaaccttcaaaaacacgttgaaacatttcggattttaaaatctgaata 29389240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 506
Target Start/End: Original strand, 18075519 - 18075590
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaatttta 506  Q
    ||||||||||||| ||||   ||||||||| |||||||||| |||||| ||||| ||| |||||| ||||||    
T  18075519 ggattatagaatctgaacgaaataaacaccccataaaaaccaccaaaagacgttaaaatatttcagatttta 18075590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 511
Target Start/End: Complemental strand, 33450910 - 33450843
Alignment:
Q  445 atccgaacatcataaacacctcataaaaacctcc-aaaatacgttgaaagatttcaaattttaaaatc 511  Q
    ||||||||| |||||||||||| ||||| ||||| |||| ||||||||| ||||| ||||||| ||||    
T  33450910 atccgaacaacataaacacctcctaaaagcctccaaaaacacgttgaaatatttcgaattttagaatc 33450843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 8e-44; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 236 - 425
Target Start/End: Complemental strand, 40018635 - 40018456
Alignment:
Q  236 gaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaactaacactaactcacgctagttttggt 335  Q
    |||| |||||||||| ||||||||||||||||||  | | ||| | || ||||||||| ||||||||| ||||||          ||||||||||||| |    
T  40018635 gaatcctgctctccatctagcacaaaatactcgcgccttgcagtcatgtccaaaatgcccatgcgctagttaact----------cacgctagttttgtt 40018546  T
Q  336 ttcacctatattgagcaatgagcgccaaaattgagagaggtgagccccaaaattttattttatgaattagtacaatttagacgtaagtga 425  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||    
T  40018545 ttcacctatattgagcaatgagcaccaaaattgagagaggtgaacactaaaattttattttatgaattagtacaatttagacgtaagtga 40018456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 432 - 519
Target Start/End: Complemental strand, 17223186 - 17223098
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacct-ccaaaatacgttgaaagatttcaaattttaaaatctaaataag 519  Q
    |||| |||||||||||||||||  ||| ||||||||||||||||| | |||| ||||||||| |||||| |||||| ||||||||||||    
T  17223186 tttgaattatagaatccgaacagtatacacacctcataaaaacctgcaaaaacacgttgaaatatttcagattttagaatctaaataag 17223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 432 - 506
Target Start/End: Original strand, 28503237 - 28503311
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaatttta 506  Q
    ||||||||||| ||| |||||  |||||| ||  ||||||||||||||||||||||||||| |||||| ||||||    
T  28503237 tttggattataaaattcgaacggcataaatactccataaaaacctccaaaatacgttgaaatatttcagatttta 28503311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 508
Target Start/End: Complemental strand, 22017725 - 22017651
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctcc-aaaatacgttgaaagatttcaaattttaaa 508  Q
    |||||||||||||||||   |||||||||| ||||||||||||| ||||  |||||||| |||||| ||||||||    
T  22017725 ggattatagaatccgaatggcataaacaccccataaaaacctccaaaaacgcgttgaaacatttcagattttaaa 22017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 482
Target Start/End: Complemental strand, 40491794 - 40491744
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaa 482  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||||||||    
T  40491794 tttggattatagaatctaaacggcataaacacctcataaaaacctccaaaa 40491744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 482
Target Start/End: Original strand, 23994352 - 23994398
Alignment:
Q  436 gattatagaatccgaacatcataaacacctcataaaaacctccaaaa 482  Q
    ||||||| |||||||||| |||||||||| ||| |||||||||||||    
T  23994352 gattatataatccgaacaacataaacaccccatgaaaacctccaaaa 23994398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 479 - 537
Target Start/End: Original strand, 27549737 - 27549795
Alignment:
Q  479 aaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacatactcata 537  Q
    |||| ||||||||| ||||||||||||| |||||||||| || |||||| | |||||||    
T  27549737 aaaacacgttgaaacatttcaaattttagaatctaaatatgatgtgcgagaaactcata 27549795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 36347995 - 36347919
Alignment:
Q  237 aattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaactaac 313  Q
    ||||| ||||| |||| ||||||||| ||||||||||| || || || ||||||| ||| || |||| |||||||||    
T  36347995 aattcggctcttcacccagcacaaaacactcgcatcctgcaaccttgtccaaaatactcctgtgctagttaactaac 36347919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 3e-43; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 186769 - 186870
Alignment:
Q  316 taactcacgctagttttggtttcacctatattgagcaatgagcgccaaaattgagagaggtgagccccaaaattttattttatgaattagtacaatttag 415  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  186769 taactcacgctagttttgttttcacctatattgagcaatgagcaccaaaattgagagaggtgagcaccaaaattttattttatgaattagtacaatttag 186868  T
Q  416 ac 417  Q
    ||    
T  186869 ac 186870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 385 - 425
Target Start/End: Original strand, 186873 - 186913
Alignment:
Q  385 aaattttattttatgaattagtacaatttagacgtaagtga 425  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  186873 aaattttattttatgaattagtacaatttagacgtaagtga 186913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 437 - 511
Target Start/End: Complemental strand, 24511008 - 24510934
Alignment:
Q  437 attatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatc 511  Q
    |||||||||| | |||  |||||||| | ||||||||||||||||||||||| ||| |||||| |||||||||||    
T  24511008 attatagaattcaaacggcataaacatcccataaaaacctccaaaatacgtttaaatatttcagattttaaaatc 24510934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 435 - 511
Target Start/End: Complemental strand, 43050228 - 43050152
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatc 511  Q
    |||||||||||||| |||  |||||| |||   ||||||||||||||| ||||||||| |||||| |||||||||||    
T  43050228 ggattatagaatccaaacgacataaataccctgtaaaaacctccaaaacacgttgaaacatttcagattttaaaatc 43050152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 37058206 - 37058131
Alignment:
Q  236 gaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaacta 311  Q
    ||||| |||||| |||| ||||||||| ||||||| ||| ||||| |||||||||||| | ||||||| |||||||    
T  37058206 gaattttgctcttcacccagcacaaaacactcgcaccctgcagccatgcccaaaatgcccctgcgctaattaacta 37058131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 450 - 519
Target Start/End: Complemental strand, 23046642 - 23046573
Alignment:
Q  450 aacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataag 519  Q
    |||| |||||||||| |||||||| ||||||||  | || ||| ||||||||||||||||||| ||||||    
T  23046642 aacaacataaacaccccataaaaatctccaaaacgcattaaaacatttcaaattttaaaatctgaataag 23046573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 509
Target Start/End: Original strand, 38308068 - 38308146
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaac-ctccaaaatacgttgaaagatttcaaattttaaaa 509  Q
    |||| ||||||||||||||||  ||||||||||  ||||||||  || |||| ||||||||| |||||| |||||||||    
T  38308068 tttgaattatagaatccgaacggcataaacaccctataaaaactttcaaaaacacgttgaaacatttcagattttaaaa 38308146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 467 - 516
Target Start/End: Complemental strand, 42346963 - 42346914
Alignment:
Q  467 ataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaat 516  Q
    |||||| ||||||||||||||| ||| |||||| |||||| |||||||||    
T  42346963 ataaaaccctccaaaatacgtttaaacatttcagattttataatctaaat 42346914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 511
Target Start/End: Original strand, 13019641 - 13019721
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaat-acgttgaaagatttcaaattttaaaatc 511  Q
    |||||||||||||||||||||  |||||||||  |||||||| || |||||| || ||||||  ||||| ||||| |||||    
T  13019641 tttggattatagaatccgaacggcataaacactccataaaaatcttcaaaatcacattgaaacgtttcagattttcaaatc 13019721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 6e-17; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 431 - 516
Target Start/End: Original strand, 2749176 - 2749261
Alignment:
Q  431 atttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaat 516  Q
    ||||||||||||||||||||||| ||||||  || ||||||||||||||||| | ||||||| |||||  |||||| |||||||||    
T  2749176 atttggattatagaatccgaacaccataaatgccccataaaaacctccaaaacaagttgaaacatttcggattttagaatctaaat 2749261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 462 - 547
Target Start/End: Original strand, 32556519 - 32556604
Alignment:
Q  462 acctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacatactcataggataaaaaa 547  Q
    |||||||||||||||||||||||||||  || |||||| |||||||||||  |||| || |||||| | |||||||||||||||||    
T  32556519 acctcataaaaacctccaaaatacgttacaatatttcagattttaaaatccgaataggacgtgcgagaaactcataggataaaaaa 32556604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 517
Target Start/End: Complemental strand, 50549298 - 50549215
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaata 517  Q
    ||||||||||| ||| |||||| ||||||||||||||  ||||||||| || | ||| ||| |||||| |||||| ||||||||||    
T  50549298 tttggattatataattcgaacaacataaacacctcat--aaacctccacaacatgttaaaacatttcatattttagaatctaaata 50549215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 7013138 - 7013215
Alignment:
Q  236 gaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaactaac 313  Q
    |||||||||||| |||||| ||||||| ||| ||| ||| ||| | | || ||||| ||||||||||| |||||||||    
T  7013138 gaattctgctcttcacctaacacaaaacacttgcaccctgcaggcattccgaaaatactcatgcgctagttaactaac 7013215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 9e-16; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 432 - 547
Target Start/End: Original strand, 45195749 - 45195864
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacata 531  Q
    ||||||||||| ||| |||||  |||||||| || ||||||| |||||||||||||| ||| ||||| ||||||| |||  |||||||  |||||| | |    
T  45195749 tttggattatataattcgaacgacataaacatcttataaaaatctccaaaatacgttaaaacatttcgaattttagaattcaaataaggcgtgcgagaaa 45195848  T
Q  532 ctcataggataaaaaa 547  Q
    ||||||||||| ||||    
T  45195849 ctcataggatagaaaa 45195864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 435 - 539
Target Start/End: Complemental strand, 12311918 - 12311813
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctc-caaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacatact 533  Q
    ||||||||||||||||||   |||||||||||||||||| |||  |||||| ||| ||| | |||| || ||||||||||||||||| | |||| | |||    
T  12311918 ggattatagaatccgaacggaataaacacctcataaaaatctctaaaaatatgttaaaataattcagatgttaaaatctaaataagacgcgcgagaaact 12311819  T
Q  534 catagg 539  Q
    ||||||    
T  12311818 catagg 12311813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 498
Target Start/End: Complemental strand, 39791314 - 39791253
Alignment:
Q  437 attatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttc 498  Q
    ||||||||||||||||  |||||||||| |||||||| || ||||| ||||||||| |||||    
T  39791314 attatagaatccgaacggcataaacaccccataaaaatcttcaaaacacgttgaaatatttc 39791253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 517
Target Start/End: Complemental strand, 55193579 - 55193496
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcat-aaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaata 517  Q
    ||||||||||||||||||| |||||| ||| ||| |||||  | ||||| | ||| ||| |||||| |||||||||||||||||    
T  55193579 ggattatagaatccgaacaacataaaaaccccataaaaaaaattcaaaagatgttaaaatatttcatattttaaaatctaaata 55193496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 455 - 511
Target Start/End: Original strand, 41858193 - 41858249
Alignment:
Q  455 cataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatc 511  Q
    |||||| ||| ||||||| |||| |||| ||||||||||||||| ||||||| ||||    
T  41858193 cataaataccccataaaatcctctaaaacacgttgaaagatttcgaattttagaatc 41858249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 311
Target Start/End: Original strand, 45042101 - 45042177
Alignment:
Q  235 ggaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaacta 311  Q
    |||||| |||||| |||| ||||||||||||||| ||||| ||||| || | | ||||| | ||||||| |||||||    
T  45042101 ggaattttgctcttcacccagcacaaaatactcgtatcctgcagccatgtctataatgcccctgcgctagttaacta 45042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 53689125 - 53689049
Alignment:
Q  431 atttggattatagaatccgaacatcataaacacctcat-aaaaacctccaaaatacgttgaaagatttcaaatttta 506  Q
    ||||||||||||||||| ||||  |||||||||| ||| |||||  || |||||||||||||| |||| ||| ||||    
T  53689125 atttggattatagaatctgaacgacataaacaccccataaaaaatttcaaaaatacgttgaaacattttaaaattta 53689049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 437 - 539
Target Start/End: Original strand, 56 - 158
Alignment:
Q  437 attatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacatactcat 536  Q
    |||||||||||| |||  |||||||||| |||||||||||| |||| ||||| ||| |||||| |||||||| | ||||||||  |||||| | ||||||    
T  56 attatagaatccaaacggcataaacaccccataaaaacctctaaaacacgtttaaatatttcagattttaaattttaaataaggtgtgcgaaaaactcat 155  T
Q  537 agg 539  Q
    |||    
T  156 agg 158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 435 - 517
Target Start/End: Complemental strand, 13818858 - 13818776
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaata 517  Q
    |||||||||||||| ||| ||||||||||| |||| ||||| |||||| ||||||||| ||||  |||||||||||| |||||    
T  13818858 ggattatagaatccaaacttcataaacaccccatataaaccaccaaaacacgttgaaatattttgaattttaaaatccaaata 13818776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 437 - 519
Target Start/End: Complemental strand, 7632768 - 7632685
Alignment:
Q  437 attatagaatccgaacatcataaacacctcataaaaacctccaaaa-tacgttgaaagatttcaaattttaaaatctaaataag 519  Q
    ||||||||||| ||||  ||||||||||  |||||||||| ||||| |||||||||| ||||||||||||||||| | ||||||    
T  7632768 attatagaatctgaacgacataaacacccgataaaaaccttcaaaaatacgttgaaatatttcaaattttaaaatttgaataag 7632685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 431 - 498
Target Start/End: Complemental strand, 37507656 - 37507589
Alignment:
Q  431 atttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttc 498  Q
    |||||| |||||||||| ||||  |||||| ||| ||||||||||||||||| ||||||||| |||||    
T  37507656 atttggtttatagaatctgaacgacataaataccccataaaaacctccaaaacacgttgaaacatttc 37507589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 512
Target Start/End: Complemental strand, 39555975 - 39555896
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatct 512  Q
    |||| |||||| ||||| |||| ||||||||||  ||||||| ||| |||| ||||||||| |||||| ||||||||||||    
T  39555975 tttgaattatataatcc-aacaacataaacaccctataaaaatctcaaaaacacgttgaaacatttcagattttaaaatct 39555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 37325178 - 37325116
Alignment:
Q  455 cataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaata 517  Q
    |||||||| | ||| ||||||||||||| ||||| ||| ||||| ||||||||||| ||||||    
T  37325178 cataaacatcccattaaaacctccaaaacacgttaaaacatttcgaattttaaaatttaaata 37325116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 478 - 527
Target Start/End: Complemental strand, 7685502 - 7685453
Alignment:
Q  478 caaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcga 527  Q
    ||||||||||||||| |||||| |||||||||| |||||| || ||||||    
T  7685502 caaaatacgttgaaatatttcagattttaaaatttaaataggatgtgcga 7685453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 476
Target Start/End: Original strand, 4656570 - 4656614
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacct 476  Q
    |||||||||||||||||||||  |||||| || ||||||||||||    
T  4656570 tttggattatagaatccgaacgacataaatacatcataaaaacct 4656614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 470 - 510
Target Start/End: Original strand, 24209920 - 24209960
Alignment:
Q  470 aaaacctccaaaatacgttgaaagatttcaaattttaaaat 510  Q
    ||||||||||||||||| || || |||||||||||||||||    
T  24209920 aaaacctccaaaatacgatgtaacatttcaaattttaaaat 24209960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 437 - 539
Target Start/End: Complemental strand, 15462136 - 15462034
Alignment:
Q  437 attatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataagaggtgcgacatactcat 536  Q
    |||||||||||| |||  |||||||||| |||||||||||| |||| ||||| ||| |||||| |||||||| | ||||||||  |||||| | ||||||    
T  15462136 attatagaatccaaacggcataaacaccccataaaaacctctaaaacacgtttaaatatttcagattttaaattttaaataaggtgtgcgaaaaactcat 15462037  T
Q  537 agg 539  Q
    |||    
T  15462036 agg 15462034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 510
Target Start/End: Complemental strand, 22318301 - 22318226
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaat 510  Q
    |||||||||||| |||| | |||||||| ||||||||||||| ||||| | ||| ||| |||||| ||||||||||    
T  22318301 ggattatagaattcgaatagcataaacatctcataaaaaccttcaaaacatgttaaaacatttcatattttaaaat 22318226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 448 - 511
Target Start/End: Complemental strand, 51715113 - 51715050
Alignment:
Q  448 cgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatc 511  Q
    |||||| |||||||||| ||||||||||||||||| ||||| ||| |||||| |||||| ||||    
T  51715113 cgaacagcataaacaccccataaaaacctccaaaacacgttaaaacatttcagattttagaatc 51715050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 517
Target Start/End: Complemental strand, 20705044 - 20704962
Alignment:
Q  436 gattatagaatccgaacatcataaacacctcataaaaacctccaaaa-tacgttgaaagatttcaaattttaaaatctaaata 517  Q
    ||||||||||||| |||   || |||| ||||||||||||||||||| || ||| ||| ||||||||||||||||||| ||||    
T  20705044 gattatagaatccaaacggtatcaacatctcataaaaacctccaaaaatatgttaaaacatttcaaattttaaaatctgaata 20704962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 438 - 507
Target Start/End: Complemental strand, 33995725 - 33995656
Alignment:
Q  438 ttatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaa 507  Q
    ||||||||||| |||| |||||| | | ||||||||||||||||| || |||||| |||||| |||||||    
T  33995725 ttatagaatccaaacaacataaatatcccataaaaacctccaaaacacattgaaacatttcagattttaa 33995656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 482
Target Start/End: Original strand, 42110959 - 42111008
Alignment:
Q  433 ttggattatagaatccgaacatcataaacacctcataaaaacctccaaaa 482  Q
    |||||||||||||| |||||  |||||||||| |||||||||||||||||    
T  42110959 ttggattatagaattcgaacgacataaacaccccataaaaacctccaaaa 42111008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 517
Target Start/End: Complemental strand, 1750186 - 1750100
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaat-acgttgaaagatttcaaattttaaaatctaaata 517  Q
    |||||||||||||||||||||   |||||||||  ||| |||||||| |||| ||||||||| |||| | |||||| |||| |||||    
T  1750186 tttggattatagaatccgaacgaaataaacaccctatacaaacctcctaaatcacgttgaaacattttagattttagaatccaaata 1750100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 510
Target Start/End: Complemental strand, 31219282 - 31219209
Alignment:
Q  436 gattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaat 510  Q
    |||||||||||||||||  ||||||| || ||||||| ||||||||| | | ||||| |||||| ||||||||||    
T  31219282 gattatagaatccgaacggcataaactccccataaaa-cctccaaaacatgctgaaacatttcagattttaaaat 31219209  T

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Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 309
Target Start/End: Complemental strand, 49304163 - 49304090
Alignment:
Q  236 gaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaac 309  Q
    ||||| |||||| |||||||||||||| ||| ||| ||| ||||| |  ||||||||| ||||||||| |||||    
T  49304163 gaattttgctcttcacctagcacaaaacacttgcaccctgcagccatatccaaaatgcccatgcgctagttaac 49304090  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 236 - 311
Target Start/End: Complemental strand, 39294994 - 39294919
Alignment:
Q  236 gaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaacta 311  Q
    ||||| ||||||||||| ||||||||| ||||||| ||| ||||| |||||||||||| | ||||||| |||||||    
T  39294994 gaattttgctctccacccagcacaaaacactcgcaccctgcagccatgcccaaaatgcccctgcgctagttaacta 39294919  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 432 - 506
Target Start/End: Original strand, 35424875 - 35424949
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaatacgttgaaagatttcaaatttta 506  Q
    |||||||||||||||| ||||  |||||||| | ||||||||||||||||||| ||| ||| |||||| ||||||    
T  35424875 tttggattatagaatctgaacggcataaacatcgcataaaaacctccaaaatatgttaaaatatttcagatttta 35424949  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 455 - 520
Target Start/End: Original strand, 16377903 - 16377968
Alignment:
Q  455 cataaacacctcataaaaacctccaaaatacgttgaaagatttcaaattttaaaatctaaataaga 520  Q
    ||||||||||||||||||||||| |||| ||||  ||| |||| | ||||||||||||||||||||    
T  16377903 cataaacacctcataaaaacctcaaaaacacgtaaaaatattttatattttaaaatctaaataaga 16377968  T

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Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 236 - 310
Target Start/End: Original strand, 20188236 - 20188310
Alignment:
Q  236 gaattctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgctacttaact 310  Q
    ||||||||||||||||| ||||||||| |||||| |||| ||||  |||||||||||| | |||| || ||||||    
T  20188236 gaattctgctctccacccagcacaaaacactcgcgtcctgcagcgttgcccaaaatgcccctgcgttagttaact 20188310  T

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Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 432 - 517
Target Start/End: Complemental strand, 17116002 - 17115916
Alignment:
Q  432 tttggattatagaatccgaacatcataaacacctcataaaaacctccaaaat-acgttgaaagatttcaaattttaaaatctaaata 517  Q
    |||| |||||||||| |||||  |||||||||| ||||||||| | |||||  ||||||||| |||| | ||||||||||| |||||    
T  17116002 tttgtattatagaattcgaacgacataaacaccccataaaaactttcaaaaacacgttgaaatattttagattttaaaatccaaata 17115916  T

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Target: scaffold0110 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 435 - 497
Target Start/End: Complemental strand, 6522 - 6459
Alignment:
Q  435 ggattatagaatccgaacatcataaacacctcataaaaacctc-caaaatacgttgaaagattt 497  Q
    ||||||||||||||||||  ||||||| |||||||||||||||  |||||||||||||| ||||    
T  6522 ggattatagaatccgaacgacataaacccctcataaaaacctctaaaaatacgttgaaacattt 6459  T

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Target: scaffold1669 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold1669
Description:

Target: scaffold1669; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 303
Target Start/End: Original strand, 504 - 568
Alignment:
Q  239 ttctgctctccacctagcacaaaatactcgcatcctacagccctgcccaaaatgctcatgcgcta 303  Q
    |||||||||||||| ||||||||| ||||||   || ||||| |||||||||||| | |||||||    
T  504 ttctgctctccacccagcacaaaacactcgcgcgctgcagccatgcccaaaatgcccgtgcgcta 568  T

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