View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19678_low_31 (Length: 309)

Name: NF19678_low_31
Description: NF19678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19678_low_31
NF19678_low_31
[»] chr4 (31 HSPs)
chr4 (20-268)||(4766237-4766480)
chr4 (26-142)||(43893161-43893282)
chr4 (26-142)||(48459414-48459535)
chr4 (26-142)||(21423794-21423915)
chr4 (26-142)||(47550394-47550515)
chr4 (26-142)||(44317467-44317589)
chr4 (26-108)||(31752389-31752475)
chr4 (26-142)||(5902655-5902776)
chr4 (26-142)||(7608903-7609024)
chr4 (26-142)||(11122910-11123031)
chr4 (26-115)||(39046886-39046978)
chr4 (26-108)||(31918634-31918721)
chr4 (26-142)||(6382313-6382435)
chr4 (26-142)||(11028005-11028127)
chr4 (26-105)||(42774694-42774777)
chr4 (26-99)||(55826708-55826786)
chr4 (26-108)||(47239461-47239547)
chr4 (26-142)||(42299724-42299844)
chr4 (26-108)||(32585422-32585508)
chr4 (33-142)||(19534395-19534509)
chr4 (33-81)||(425763-425811)
chr4 (33-81)||(37107351-37107399)
chr4 (42-162)||(37349072-37349197)
chr4 (270-304)||(4766032-4766066)
chr4 (33-79)||(28695251-28695297)
chr4 (136-224)||(19548891-19548973)
chr4 (37-114)||(13015321-13015402)
chr4 (32-78)||(39188453-39188499)
chr4 (33-78)||(7985231-7985276)
chr4 (41-81)||(1724417-1724457)
chr4 (33-81)||(12825568-12825616)
[»] chr3 (39 HSPs)
chr3 (26-224)||(6738357-6738555)
chr3 (26-173)||(20086936-20087087)
chr3 (26-112)||(44953506-44953596)
chr3 (26-142)||(17146190-17146311)
chr3 (26-142)||(39655313-39655434)
chr3 (26-138)||(44106836-44106953)
chr3 (26-112)||(34025881-34025971)
chr3 (26-108)||(44172553-44172639)
chr3 (26-108)||(44179253-44179339)
chr3 (26-142)||(29284263-29284384)
chr3 (26-138)||(44252674-44252791)
chr3 (26-142)||(49025608-49025728)
chr3 (26-108)||(29842235-29842321)
chr3 (26-108)||(49579991-49580077)
chr3 (26-108)||(52572536-52572622)
chr3 (26-142)||(7469818-7469939)
chr3 (26-142)||(44639201-44639322)
chr3 (26-81)||(10823799-10823854)
chr3 (26-108)||(23154139-23154224)
chr3 (26-119)||(43582505-43582602)
chr3 (26-81)||(23547078-23547133)
chr3 (26-108)||(22535916-22536002)
chr3 (26-108)||(39728598-39728684)
chr3 (27-108)||(48390892-48390977)
chr3 (26-142)||(52198081-52198203)
chr3 (26-78)||(23580755-23580806)
chr3 (26-108)||(34154345-34154427)
chr3 (33-81)||(30682755-30682803)
chr3 (41-81)||(4557411-4557451)
chr3 (33-81)||(42758308-42758356)
chr3 (169-221)||(44106749-44106801)
chr3 (173-224)||(53631988-53632040)
chr3 (26-73)||(48306650-48306697)
chr3 (170-224)||(52572690-52572745)
chr3 (136-224)||(10371225-10371314)
chr3 (41-81)||(830951-830991)
chr3 (41-77)||(4016154-4016190)
chr3 (41-81)||(53631846-53631886)
chr3 (41-81)||(54317086-54317126)
[»] chr5 (32 HSPs)
chr5 (26-207)||(6092500-6092680)
chr5 (26-224)||(17853246-17853453)
chr5 (26-142)||(4920753-4920874)
chr5 (26-142)||(35311750-35311870)
chr5 (26-142)||(15890134-15890254)
chr5 (26-116)||(4583046-4583140)
chr5 (26-116)||(5908756-5908850)
chr5 (26-142)||(12866592-12866714)
chr5 (26-215)||(3564701-3564889)
chr5 (26-138)||(42987524-42987641)
chr5 (26-140)||(40517733-40517852)
chr5 (26-142)||(12834615-12834737)
chr5 (32-142)||(28045589-28045703)
chr5 (26-101)||(13402086-13402164)
chr5 (26-108)||(22694977-22695063)
chr5 (27-108)||(1218684-1218768)
chr5 (26-99)||(30996523-30996600)
chr5 (26-81)||(20973592-20973647)
chr5 (28-116)||(29246019-29246111)
chr5 (41-142)||(35194030-35194136)
chr5 (33-108)||(27302811-27302890)
chr5 (24-81)||(6156025-6156082)
chr5 (33-84)||(33420434-33420485)
chr5 (33-81)||(12447315-12447363)
chr5 (169-224)||(12834527-12834583)
chr5 (34-78)||(33862294-33862338)
chr5 (40-78)||(2985088-2985126)
chr5 (40-81)||(2412833-2412874)
chr5 (33-78)||(3573158-3573203)
chr5 (33-78)||(27088462-27088506)
chr5 (41-78)||(30115425-30115462)
chr5 (26-99)||(6369623-6369700)
[»] chr2 (28 HSPs)
chr2 (26-142)||(8915977-8916098)
chr2 (26-142)||(24414172-24414293)
chr2 (26-207)||(10920573-10920757)
chr2 (26-112)||(37999411-37999501)
chr2 (26-130)||(9632314-9632423)
chr2 (26-215)||(13705316-13705522)
chr2 (26-108)||(36128181-36128268)
chr2 (26-142)||(30846873-30846995)
chr2 (26-108)||(10208505-10208591)
chr2 (26-108)||(13830664-13830750)
chr2 (26-102)||(12193908-12193988)
chr2 (26-81)||(42798095-42798150)
chr2 (26-142)||(45115486-45115607)
chr2 (26-102)||(37106627-37106706)
chr2 (26-99)||(45256751-45256828)
chr2 (26-108)||(7314723-7314809)
chr2 (26-78)||(18106199-18106251)
chr2 (169-224)||(10208383-10208438)
chr2 (26-114)||(44746178-44746270)
chr2 (33-81)||(14540716-14540764)
chr2 (26-63)||(37472853-37472890)
chr2 (33-81)||(16226833-16226881)
chr2 (170-224)||(36128058-36128113)
chr2 (136-224)||(37106746-37106829)
chr2 (169-224)||(9632467-9632523)
chr2 (169-224)||(13830816-13830872)
chr2 (169-224)||(30847027-30847083)
chr2 (33-81)||(31942292-31942340)
[»] chr1 (39 HSPs)
chr1 (26-224)||(24236713-24236922)
chr1 (26-112)||(40087534-40087624)
chr1 (38-224)||(13390353-13390533)
chr1 (26-108)||(23966800-23966887)
chr1 (26-183)||(45866173-45866346)
chr1 (26-224)||(19572464-19572673)
chr1 (26-142)||(36187260-36187381)
chr1 (26-102)||(17092040-17092120)
chr1 (26-108)||(20774560-20774647)
chr1 (26-102)||(50426736-50426816)
chr1 (26-142)||(28297861-28297983)
chr1 (26-108)||(24710786-24710872)
chr1 (26-108)||(34611001-34611087)
chr1 (26-142)||(29936344-29936465)
chr1 (26-130)||(49250825-49250934)
chr1 (26-81)||(42439776-42439831)
chr1 (26-102)||(42707911-42707991)
chr1 (26-108)||(17134875-17134961)
chr1 (26-108)||(51421786-51421872)
chr1 (26-107)||(18354156-18354241)
chr1 (26-102)||(5180973-5181053)
chr1 (26-108)||(3628060-3628148)
chr1 (26-102)||(34060100-34060180)
chr1 (26-108)||(39616231-39616317)
chr1 (33-142)||(44615515-44615630)
chr1 (33-142)||(44792939-44793054)
chr1 (32-99)||(23490855-23490926)
chr1 (26-68)||(16408874-16408916)
chr1 (40-81)||(16433270-16433311)
chr1 (169-224)||(5181120-5181176)
chr1 (41-81)||(49741113-49741153)
chr1 (37-76)||(24159994-24160033)
chr1 (42-81)||(35936923-35936962)
chr1 (136-224)||(23968633-23968716)
chr1 (33-112)||(29871356-29871439)
chr1 (179-224)||(49740978-49741024)
chr1 (33-81)||(9982996-9983044)
chr1 (26-58)||(13020616-13020648)
chr1 (41-81)||(34673388-34673428)
[»] chr7 (41 HSPs)
chr7 (26-142)||(17851786-17851907)
chr7 (26-142)||(18125268-18125389)
chr7 (26-224)||(37195961-37196159)
chr7 (26-142)||(35074401-35074523)
chr7 (26-224)||(39455967-39456174)
chr7 (26-108)||(44734432-44734518)
chr7 (26-99)||(21702591-21702668)
chr7 (26-130)||(16811662-16811770)
chr7 (26-142)||(45708905-45709023)
chr7 (26-108)||(16866101-16866187)
chr7 (26-108)||(17885397-17885483)
chr7 (26-108)||(24753107-24753193)
chr7 (26-142)||(3226986-3227107)
chr7 (26-224)||(7779940-7780149)
chr7 (26-142)||(30650563-30650684)
chr7 (26-177)||(44985912-44986059)
chr7 (26-97)||(45885851-45885926)
chr7 (26-96)||(25905560-25905634)
chr7 (26-108)||(37182207-37182293)
chr7 (26-112)||(39316927-39317017)
chr7 (26-119)||(41741513-41741610)
chr7 (26-84)||(44658552-44658610)
chr7 (26-108)||(44794102-44794188)
chr7 (26-81)||(45380038-45380093)
chr7 (26-142)||(25979957-25980078)
chr7 (26-78)||(38139902-38139954)
chr7 (136-224)||(18825818-18825907)
chr7 (136-224)||(38152945-38153027)
chr7 (33-81)||(37579201-37579249)
chr7 (42-99)||(38152835-38152896)
chr7 (30-78)||(41103592-41103640)
chr7 (169-215)||(25905713-25905760)
chr7 (170-224)||(30650717-30650772)
chr7 (57-224)||(10072429-10072607)
chr7 (39-81)||(26004578-26004620)
chr7 (33-78)||(3920477-3920522)
chr7 (26-63)||(43507365-43507402)
chr7 (41-81)||(2630680-2630720)
chr7 (33-81)||(5377024-5377072)
chr7 (33-81)||(16078952-16079000)
chr7 (33-81)||(27850432-27850480)
[»] chr6 (23 HSPs)
chr6 (26-142)||(27738699-27738820)
chr6 (26-224)||(5863335-5863544)
chr6 (26-108)||(27534611-27534697)
chr6 (26-224)||(24225625-24225840)
chr6 (26-142)||(32853771-32853892)
chr6 (26-224)||(10188032-10188234)
chr6 (26-112)||(10142589-10142679)
chr6 (26-108)||(2367253-2367339)
chr6 (26-116)||(32053015-32053109)
chr6 (26-140)||(3483965-3484084)
chr6 (26-108)||(12141312-12141398)
chr6 (37-215)||(12309510-12309705)
chr6 (40-108)||(14032497-14032569)
chr6 (57-108)||(32532498-32532553)
chr6 (136-177)||(15498377-15498418)
chr6 (170-224)||(27534765-27534820)
chr6 (170-224)||(31496515-31496570)
chr6 (170-224)||(31501901-31501956)
chr6 (136-224)||(30986306-30986389)
chr6 (33-142)||(11762379-11762493)
chr6 (33-78)||(12678203-12678248)
chr6 (33-81)||(14506020-14506068)
chr6 (41-81)||(30816199-30816239)
[»] chr8 (24 HSPs)
chr8 (26-108)||(2075909-2075995)
chr8 (26-224)||(27932340-27932549)
chr8 (26-99)||(28977198-28977275)
chr8 (26-102)||(17220644-17220724)
chr8 (26-142)||(32302987-32303109)
chr8 (26-108)||(29108897-29108983)
chr8 (26-142)||(24927876-24927997)
chr8 (26-102)||(45235992-45236072)
chr8 (26-108)||(4230794-4230880)
chr8 (26-112)||(39445647-39445729)
chr8 (27-99)||(24870108-24870184)
chr8 (26-108)||(11255083-11255168)
chr8 (26-78)||(34776993-34777045)
chr8 (26-81)||(1063434-1063489)
chr8 (136-207)||(1063560-1063631)
chr8 (167-224)||(24569016-24569073)
chr8 (33-81)||(43113732-43113780)
chr8 (136-224)||(39445528-39445611)
chr8 (41-142)||(17469197-17469303)
chr8 (37-78)||(34021416-34021456)
chr8 (136-177)||(40248365-40248406)
chr8 (41-81)||(1012559-1012599)
chr8 (169-224)||(4230682-4230738)
chr8 (169-224)||(24928029-24928085)
[»] scaffold0189 (1 HSPs)
scaffold0189 (26-84)||(4184-4242)
[»] scaffold0519 (1 HSPs)
scaffold0519 (26-108)||(10225-10310)
[»] scaffold0036 (1 HSPs)
scaffold0036 (136-221)||(33446-33532)


Alignment Details
Target: chr4 (Bit Score: 173; Significance: 5e-93; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 20 - 268
Target Start/End: Complemental strand, 4766480 - 4766237
Alignment:
Q  20 gataattttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtatttacatttgggacgggtatgagtatgagtttgggtgg 119  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||    
T  4766480 gatagttttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtatttacatttgggacgggtatgagt------ttgggtgg 4766387  T
Q  120 atatctatatatctgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagt 219  Q
     || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||| || ||| ||||||||||||||    
T  4766386 gtacctatatatctgttacccgtgttttgaattcggggaaaacctatacccatacccatatccaaacccattcaaaaa-ggaaaacccgtcaaattaagt 4766288  T
Q  220 ttggt--cgcgcgtaatgggttttgttgccattgctacatcttctgtgctg 268  Q
    |||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  4766287 ttggtcgcgcgcgtaatgggttttgttgccattgctacatcttctgggctg 4766237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 43893161 - 43893282
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||| ||  |||||||    
T  43893161 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgaattcggggtgga 43893260  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  43893261 tacctatatacccgttacccgt 43893282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 48459414 - 48459535
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||||||| ||||||| ||||| |||  ||||||     
T  48459414 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggatgggtatgggtatgggttcggggtggg 48459513  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  48459514 tacctatatacctgttacccgt 48459535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 21423794 - 21423915
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagttt-gggtgga 120  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    |||||||||||||||||| || ||||| |||| ||||||     
T  21423794 tttttattaacatgacaattatcaaacaaaataatataacatatcaacataaagtagttttttacatttgggacgggtttgtgtatgggtttggggtggg 21423893  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  21423894 tacctatatacccgttacccgt 21423915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 47550515 - 47550394
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || ||||| |||  ||||||     
T  47550515 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgggtatgggttcggggtggg 47550416  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  47550415 tacctatatacctgttacccgt 47550394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 44317467 - 44317589
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||| || ||||| |||  ||||||    
T  44317467 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcggggtgg 44317566  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  44317567 gtacctatatacccgttacccgt 44317589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 31752389 - 31752475
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| |||||    
T  31752389 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatg 31752475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 5902776 - 5902655
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  5902776 tttttattaacatgacaattatcaaacaaaataagataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggg 5902677  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  5902676 tacctatatacccgttacccgt 5902655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 7608903 - 7609024
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    |||||||||||||||||| || ||||| |||  ||||||     
T  7608903 tttttattaacatgacaattatcaaacaaaataacataacatatcaacatagagtagttttttacatttgggacgggtttgggtatgggttcggggtggg 7609002  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  7609003 tacctatatacccgttacccgt 7609024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 11123031 - 11122910
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||    |||||||||||||||||| |||||||| |||  ||||||     
T  11123031 tttttattaacatgacaattataaaacaaaataacaaaacatatcaacataaagtagttttttacatttgggacgggtttgagtatgggttcggggtggg 11122932  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  11122931 tacctatatacccgttacccgt 11122910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 115
Target Start/End: Original strand, 39046886 - 39046978
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgg 115  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||| ||||||    
T  39046886 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttgg 39046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 31918721 - 31918634
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||| || |||||    
T  31918721 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatg 31918634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 6382435 - 6382313
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     |||||||||||||||||| || ||||| |||  ||||||    
T  6382435 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgg 6382336  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  6382335 gtacctatatacccgttacccgt 6382313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 11028005 - 11028127
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||     |||||||||||||| ||| || |||||||||  ||||||    
T  11028005 tttttattaacatgacaattatcaaacaaaataacataacatatcaatataaagtaatttttttacatttgggacaggtttgggtatgagttcggggtgg 11028104  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  11028105 gtacctatatacccgttacccgt 11028127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 42774694 - 42774777
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagt 105  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||| ||||||||||||||    
T  42774694 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacattttggacgggtatgagt 42774777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 55826786 - 55826708
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggt 99  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||     ||||||||||||||||||    
T  55826786 tttttattaacgtgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggt 55826708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 47239547 - 47239461
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    |||||||||||||| |||||| |||||    
T  47239547 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacaggtatgggtatg 47239461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 42299724 - 42299844
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta---tttacatttgggacgggtatgagtatgagtt-tgggtggat 121  Q
    |||||||||||| ||||||||||||| ||||||||||  |||||||||||||||||   |||| |||||||||| || |||||||| |||  |||||| |    
T  42299724 tttttattaacaagacaattatcaaacaaaataacatggcatatcaacataaagtactttttatatttgggacgtgtttgagtatgggttcagggtgggt 42299823  T
Q  122 atctatatatctgttacccgt 142  Q
    | ||||||| | |||||||||    
T  42299824 acctatatacccgttacccgt 42299844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 32585422 - 32585508
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||  |||||| |||||||||||    |||||||||||||||||| || |||||    
T  32585422 tttttattaacatgacaattatcaaacaaaataacaagacatataaacataaagtaagtttttacatttgggacgggtttgggtatg 32585508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 19534395 - 19534509
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttg-ggtggatatctat 127  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||| ||    | |||||| | ||||||| || ||||||||| | ||||| || ||||    
T  19534395 taacacgacaattatcaaacaaaataacatgacatatcaacataaaataattttctacattcgtgacgggtttgggtatgagttcgaggtgggtacctat 19534494  T
Q  128 atatctgttacccgt 142  Q
    ||| |||||||||||    
T  19534495 atacctgttacccgt 19534509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 425763 - 425811
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||||||||||| ||||||||||  |||||||||||||||||    
T  425763 taacatgacaattatcaaacaaaataacatggcatatcaacataaagta 425811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 37107351 - 37107399
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  37107351 taacatggcaattatcaaacaaaataacatgacatatcaacataaagta 37107399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 162
Target Start/End: Original strand, 37349072 - 37349197
Alignment:
Q  42 aattatcaaataaaataacataacatatcaacataaagtattta----catttgggacgggtatgagtatgagttt-gggtggatatctatatatctgtt 136  Q
    |||||||||| ||||||||||  |||||||||||||| || ||     |||| ||||||||| || ||||| |||  ||||||||| ||||||| |  ||    
T  37349072 aattatcaaacaaaataacatggcatatcaacataaaataattttctgcattcgggacgggtttgggtatgggttcagggtggatacctatatacccatt 37349171  T
Q  137 acccgtgttttgaattcggggaaaac 162  Q
    |||||||||||||| |||||||||||    
T  37349172 acccgtgttttgaaatcggggaaaac 37349197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 304
Target Start/End: Complemental strand, 4766066 - 4766032
Alignment:
Q  270 tcctcattcatctatctccctctttttgatgatgt 304  Q
    |||||||||||||||||||||||||||||||||||    
T  4766066 tcctcattcatctatctccctctttttgatgatgt 4766032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 79
Target Start/End: Complemental strand, 28695297 - 28695251
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaag 79  Q
    |||| |||||||||||||||||||||||||  |||||||||||||||    
T  28695297 taacgtgacaattatcaaataaaataacattgcatatcaacataaag 28695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 19548973 - 19548891
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagtttggt 224  Q
    |||| |||||||||| ||||||||||||  ||||||||||||      |||||| ||||| |||||||||||||||||||  |||||||    
T  19548973 tacctgtgttttgaaatcggggaaaacccttatccataccca------aacccagtcaaagaggggaaaaccgtcaaattgggtttggt 19548891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 13015402 - 13015321
Alignment:
Q  37 atgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttg 114  Q
    |||| |||||||||| |||||||||| ||||||||||||||| ||    |||||||| | ||||||| |||||||| |||||    
T  13015402 atgaaaattatcaaacaaaataacatgacatatcaacataaaataattttttacattcgagacgggtttgagtatgggtttg 13015321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Original strand, 39188453 - 39188499
Alignment:
Q  32 ttaacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||| |||| |||||||| |||||||||| |||||||||||||||    
T  39188453 ttaacacgacagttatcaaacaaaataacatgacatatcaacataaa 39188499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 7985276 - 7985231
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||| ||||||||||||| |||||||||| || ||||||||||||    
T  7985276 taacacgacaattatcaaacaaaataacatgacttatcaacataaa 7985231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 1724457 - 1724417
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||| || |||||||||| ||||||||||||||||||    
T  1724457 caattatctaacaaaataacatgacatatcaacataaagta 1724417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 12825616 - 12825568
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| || |||||||||| |||||||||| | ||||||||||||||||    
T  12825616 taacacgataattatcaaacaaaataacatgatatatcaacataaagta 12825568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 2e-40; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 6738555 - 6738357
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtat-gagtttgggtgga 120  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||||||||||| || || ||||||     
T  6738555 tttttattaacatggcaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgagtatggatttggggtggg 6738456  T
Q  121 tatctatatatctgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaacc-gtcaaattaagt 219  Q
    || ||||||| | ||||||||||||||||| |||||||||||      ||||||||||||| ||||||| |||||| ||| |||||| ||||||||  ||    
T  6738455 tacctatatacccgttacccgtgttttgaaatcggggaaaac------ccatacccatacccaaacccagtcaaaacgggaaaaacctgtcaaattgggt 6738362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 173
Target Start/End: Original strand, 20086936 - 20087087
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtggat 121  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||||||||| ||    ||||||||||||||||||||||||| |  |  |||||| |    
T  20086936 tttttattaacatgacaattatcaagcaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatgagtagggttcggggtgggt 20087035  T
Q  122 atctatatatctgttacccgtgttttgaattcggggaaaacctatatccata 173  Q
    | ||||||| |  |||||||||||||||| |||||||||||| ||| |||||    
T  20087036 acctatatacccattacccgtgttttgaaatcggggaaaacccatacccata 20087087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 44953596 - 44953506
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| ||||||||||||    
T  44953596 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgagtatgagtt 44953506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 17146311 - 17146190
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||||||| |||| || ||||| |||  |||||||    
T  17146311 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggaagggtttgtgtatgggttcggggtgga 17146212  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  17146211 tacctatataactgttacccgt 17146190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 39655434 - 39655313
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagttt-gggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||| ||||||| || ||||| |||| ||||||     
T  39655434 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgagacgggtttgggtatgggtttggggtggg 39655335  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  39655334 tacctatatacctgttacccgt 39655313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 44106953 - 44106836
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    |||||||||||||||||| |||||||| |||  |||| ||    
T  44106953 tttttattaacatgacaattatcaaacaaaataacataacatattaacataaagtaattttttacatttgggacgggtttgagtatgggttcggggtaga 44106854  T
Q  121 tatctatatatctgttac 138  Q
    || ||||||||| |||||    
T  44106853 tacctatatatccgttac 44106836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 34025881 - 34025971
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    ||||||||||||||||||||| |||||||||    
T  34025881 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatgagtt 34025971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 44172553 - 44172639
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||    
T  44172553 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatg 44172639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 44179253 - 44179339
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||    
T  44179253 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatg 44179339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 29284263 - 29284384
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg-tgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||| |||||||||| || ||||| ||| ||| |||     
T  29284263 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatctgggacgggtttgggtatgggttcgggctggg 29284362  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  29284363 tacctatatacccgttacccgt 29284384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 138
Target Start/End: Original strand, 44252674 - 44252791
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||| ||||||||||||| || ||||| |||  ||||||     
T  44252674 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttatatttgggacgggtttgggtatgggttcggggtggg 44252773  T
Q  121 tatctatatatctgttac 138  Q
    || ||||||| |||||||    
T  44252774 tacctatatacctgttac 44252791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 49025608 - 49025728
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtggat 121  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||    |||||||||||||||||| || ||||| ||| || ||  |    
T  49025608 tttttattaacataacaattatcaaacaaaataacataacatatcaacacaaagtaattttttacatttgggacgggtttgggtatgggttcggatgtgt 49025707  T
Q  122 atctatatatctgttacccgt 142  Q
    | ||||||| |||||||||||    
T  49025708 acctatatacctgttacccgt 49025728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 29842235 - 29842321
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||    |||||||||| ||||||||||||||||    
T  29842235 tttttattaacatgacaattatcaaacaaaataacatgacaaatcaacataaagtaattttttacatttgagacgggtatgagtatg 29842321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 49579991 - 49580077
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||    |||||||||||||||||| ||||||||    
T  49579991 tttttattaacatgacaatcatcaaacaaaataacataacatatcaatataaagtaattttttacatttgggacgggtttgagtatg 49580077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 52572536 - 52572622
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    |||||||||||||||||  ||||||||    
T  52572536 tttttattaacatgacaattatcaaacaaaataacataacatattaacataaagtaattttttacatttgggacgggcttgagtatg 52572622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 7469939 - 7469818
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  7469939 tttttattaagatgacaattatcaaacaaaataacataacatatccacataaagtagtgttttacatttgggacgggtttgtgtatgggttcggggtggg 7469840  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  7469839 tacctatatacccgttacccgt 7469818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 44639201 - 44639322
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    ||||||||||| |||||| || ||||| |||  ||||||     
T  44639201 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttggaacgggtttgggtatgggttcggggtggg 44639300  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  44639301 tacctatatacccgttacccgt 44639322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 10823854 - 10823799
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10823854 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagta 10823799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 23154224 - 23154139
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||  ||||||||||||    
T  23154224 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggataggtatgagtatg 23154139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Original strand, 43582505 - 43582602
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtgg 119  Q
    |||||||| |||||| |||||||||| |||||||||| ||||||||| ||||||||    |||||||||||||||||||||| |||| ||| ||||||    
T  43582505 tttttatttacatgataattatcaaacaaaataacatgacatatcaatataaagtaattttttacatttgggacgggtatgaatatgggttcgggtgg 43582602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 23547133 - 23547078
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  23547133 tttttattaacatgacaattatcaaacaaaataacataacatattaacataaagta 23547078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 22536002 - 22535916
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    ||||||||| ||||| ||||| |||||    
T  22536002 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttaggacgagtatgtgtatg 22535916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 39728598 - 39728684
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||| || |||||    
T  39728598 tttttattaacagaacaattatcaaacaaaataacattacatatcaacataaagtaattttttacatttgggacgggtttgggtatg 39728684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 48390977 - 48390892
Alignment:
Q  27 ttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||| |||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||| || |||||||||||| |||||    
T  48390977 tttttttaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacgttcgggacgggtatgggtatg 48390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 52198081 - 52198203
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaat-aacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||| |||||||    ||||||||||| |||||| || ||||| |||  ||||||    
T  52198081 tttttattaacatgacaattatcaaacaaaataaacatagcatatcaacgtaaagtaattttttacatttggaacgggtttgggtatgggttcggggtgg 52198180  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  52198181 gtacctatatacccgttacccgt 52198203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 23580755 - 23580806
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  23580755 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaa 23580806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 34154345 - 34154427
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||     |||||||||||||     ||||||||||||||||||||| |||||    
T  34154345 tttttattaacatgacaattatcaaacaaaataacata-----tcaacataaagtaatttttttacatttgggacgggtatgggtatg 34154427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 30682755 - 30682803
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  30682755 taacatgaccattatcaaacaaaataacatgacatatcaacataaagta 30682803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 4557451 - 4557411
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  4557451 caattatcaaacaaaataacatgacatatcaacataaagta 4557411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 42758308 - 42758356
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||| ||||||||||| ||||||||||  |||||||||||||||||    
T  42758308 taacatggcaattatcaaacaaaataacatggcatatcaacataaagta 42758356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 44106801 - 44106749
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagttt 221  Q
    |||||| |||||| ||||||| |||||| |||||||||||||||||| |||||    
T  44106801 ccatactcatacccaaacccagtcaaaacggggaaaaccgtcaaattgagttt 44106749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 224
Target Start/End: Original strand, 53631988 - 53632040
Alignment:
Q  173 acccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||| |||||||||||| | |||||| |||||||||||||||||||    
T  53631988 acccatacctatacccattcaaaacgaggaaaacccgtcaaattaagtttggt 53632040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 48306697 - 48306650
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaac 73  Q
    |||||||||||||||||||||||||| ||| |||||| ||| ||||||    
T  48306697 tttttattaacatgacaattatcaaacaaattaacatgacaaatcaac 48306650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 52572690 - 52572745
Alignment:
Q  170 catacccatacctaaacccattcaaaaaggggaaaacc-gtcaaattaagtttggt 224  Q
    |||||||||||| ||||||| |||||| |||||||||| |||||||| ||||||||    
T  52572690 catacccatacccaaacccagtcaaaatggggaaaacctgtcaaattgagtttggt 52572745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 10371314 - 10371225
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||||  | |||||||| | |||  |||||||| ||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  10371314 tacccgtgttttgagattggggaaaatccatactcatacccaaacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 10371225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 830951 - 830991
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    
T  830951 caattatcaaacaaaataacatagcatattaacataaagta 830991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 4016190 - 4016154
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataa 77  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  4016190 caattatcaaacaaaataacatgacatatcaacataa 4016154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 53631846 - 53631886
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  53631846 caattatcaaacaaaataacatggcatatcaacataaagta 53631886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 54317086 - 54317126
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  54317086 caattatcaaacaaaataacatggcatatcaacataaagta 54317126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 9e-30; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 207
Target Start/End: Complemental strand, 6092680 - 6092500
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||| | || ||||| |||  ||||||     
T  6092680 tttttattaacattgcaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtggg 6092581  T
Q  121 tatctatatatctgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaacc 207  Q
    || ||||||| | ||||||||||||||||  ||||| |||||      ||||||||||||| ||||||| |||||| ||||||||||    
T  6092580 tacctatatacccgttacccgtgttttgagatcgggaaaaac------ccatacccatacccaaacccaatcaaaacggggaaaacc 6092500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 17853453 - 17853246
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgg-gtgga 120  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||| ||| || ||||     
T  17853453 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcggagtggg 17853355  T
Q  121 tatctatatatctgttacccgt---------gt-tttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgt 209  Q
    |||||||||||| |||||||||         || |||||| |||||||||||| ||||||||||||      ||||||| |||||| |||||||| ||||    
T  17853354 tatctatatatccgttacccgtcccatacccgtgtttgaaatcggggaaaacccatatccataccc------aaacccaatcaaaacggggaaaacccgt 17853261  T
Q  210 caaattaagtttggt 224  Q
    ||||||| |||||||    
T  17853260 caaattaggtttggt 17853246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 4920753 - 4920874
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||  |||||||    
T  4920753 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtgga 4920852  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  4920853 tacctatatacccgttacccgt 4920874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 35311750 - 35311870
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgg-gtgga 120  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    ||||||||||||||||||||||||||| ||| || ||||     
T  35311750 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggagtggg 35311848  T
Q  121 tatctatatatctgttacccgt 142  Q
    || |||||||||||||||||||    
T  35311849 tacctatatatctgttacccgt 35311870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 15890134 - 15890254
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtggat 121  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||| ||| |||||| |    
T  15890134 ttttcattaatatgacaattatcaaataaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgggtgggt 15890233  T
Q  122 atctatatatctgttacccgt 142  Q
    | ||||||| | |||||||||    
T  15890234 acctatatacccgttacccgt 15890254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 4583046 - 4583140
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg 116  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||| |||||||    
T  4583046 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggtttggg 4583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 5908850 - 5908756
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg 116  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||||||    
T  5908850 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggtttggg 5908756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 12866714 - 12866592
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacata-acatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttg-ggtgg 119  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||| ||| | |||||    
T  12866714 tttttattaacatgacaattatcaaacaaaataacatagacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgcggtgg 12866615  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| |||||||||||    
T  12866614 gtacctatatacctgttacccgt 12866592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 3564889 - 3564701
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgg-gt-gg 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||| |||||||||  |||| ||| || || ||    
T  3564889 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttggaacgggtatggatatgggttcggagtagg 3564791  T
Q  120 atatctatatatctgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaatt 215  Q
     || ||||||| ||||||  ||||||||||| |||| ||||      ||||||||||||||| ||||||| |||||| ||| ||| ||||||||||    
T  3564790 gtacctatatacctgttattcgtgttttgaaatcggagaaa------atccatacccatacccaaacccagtcaaaacgggaaaacccgtcaaatt 3564701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 42987641 - 42987524
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg-tgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || ||||| ||| ||| |||     
T  42987641 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgggtatgggttcgggatggg 42987542  T
Q  121 tatctatatatctgttac 138  Q
    || ||||||||| |||||    
T  42987541 tacctatatatccgttac 42987524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 40517733 - 40517852
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    ||||| |||||||||||| |||||||| |||  ||||||     
T  40517733 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacctttgggacgggtttgagtatgggttcggggtggg 40517832  T
Q  121 tatctatatatctgttaccc 140  Q
    || ||||||| | |||||||    
T  40517833 taactatatacccgttaccc 40517852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 12834737 - 12834615
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacata-acatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||    ||||||||||||||||||||| ||||| |||  |||| |    
T  12834737 tttttattaacatgacaattatcaaacaaaataacatagacatatcaacataaattaattttttacatttgggacgggtatgggtatgggttcggggtag 12834638  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| |||||||||||    
T  12834637 gtacctatatacctgttacccgt 12834615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 142
Target Start/End: Original strand, 28045589 - 28045703
Alignment:
Q  32 ttaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtggatatctat 127  Q
    ||||||| |||||||| ||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| ||||| ||| |||||| || ||||    
T  28045589 ttaacataacaattataaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgggttcgggtgggtacctat 28045688  T
Q  128 atatctgttacccgt 142  Q
    ||| | |||||||||    
T  28045689 atacccgttacccgt 28045703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 13402164 - 13402086
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtat 101  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||    
T  13402164 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaattttttacatttgggacgggtat 13402086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 22695063 - 22694977
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    |||||||||||||||||| || |||||    
T  22695063 tttttattaacatgacaattatcaaacaaaataacattacatatcaacataaaataattttttacatttgggacgggtttgggtatg 22694977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 1218684 - 1218768
Alignment:
Q  27 ttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||    ||||||||||||||||||||| |||||    
T  1218684 tttttttaacatgacaattatcaaacaaaataacat-acaaatcaacataaagtaattttttacatttgggacgggtatgggtatg 1218768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 30996523 - 30996600
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||||||||||||||||||||||||| ||||||||||  ||||||||| |||||||    ||||||||||||||||||    
T  30996523 tttttattaacatgacaattatcaaacaaaataacatggcatatcaacttaaagtaattttttacatttgggacgggt 30996600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 20973647 - 20973592
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  20973647 tttttattaacatgacaattatcaaacaaaataccatgacatatcaacataaagta 20973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 29246111 - 29246019
Alignment:
Q  28 tttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg 116  Q
    ||||||||||| |||||||||||| |||||||||| ||||| ||||||||| ||    ||||||||||||| ||||||| ||||| |||||||    
T  29246111 tttattaacataacaattatcaaacaaaataacatgacataccaacataaaataattttttacatttgggatgggtatgggtatgggtttggg 29246019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 35194136 - 35194030
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagttt-gggtggatatctatatatctgt 135  Q
    ||||||||||| ||||||||||| ||||| |||||||||||    | |||||| ||||||||| ||||||||||||| |||||| || ||||||| | ||    
T  35194136 caattatcaaacaaaataacatagcatattaacataaagtaattttctacattcgggacgggtttgagtatgagtttggggtgggtacctatatacccgt 35194037  T
Q  136 tacccgt 142  Q
    |||||||    
T  35194036 tacccgt 35194030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 27302890 - 27302811
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||||||||| |||||||||| |||||| |||||||||||    ||||| ||||||||| |||||| ||||    
T  27302890 taacatgacaattatcaaacaaaataacatgacatattaacataaagtaattttttacgtttgggacgtgtatgactatg 27302811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 6156082 - 6156025
Alignment:
Q  24 attttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| |||||||||||||||| ||||||||||  ||||| |||||||||||    
T  6156082 attttttattaccatgacaattatcaaacaaaataacatgtcatataaacataaagta 6156025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 33420485 - 33420434
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagtattt 84  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||| |||||    
T  33420485 taacacgacaattatcaaataaaataacatgacatatcaatataaaatattt 33420434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 12447315 - 12447363
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| |||||||||| |||||| |||||||||||    
T  12447315 taacacgacaattatcaaacaaaataacatgacatattaacataaagta 12447363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 12834583 - 12834527
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||| ||||||| |||||| |||||||| |||||||||| ||||||||    
T  12834583 ccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgagtttggt 12834527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 33862338 - 33862294
Alignment:
Q  34 aacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||||||||||||||| ||||||||||  ||||||||||||||    
T  33862338 aacatgacaattatcaaacaaaataacatggcatatcaacataaa 33862294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 2985088 - 2985126
Alignment:
Q  40 acaattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  2985088 acaattatcaaataaaataacatgacatatcaatataaa 2985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 2412874 - 2412833
Alignment:
Q  40 acaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||| |||||||||| ||||||||| ||||||||    
T  2412874 acaattatcaaacaaaataacatgacatatcaatataaagta 2412833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 3573158 - 3573203
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||| ||||||||||||| | |||||||| |||||||||||||||    
T  3573158 taacacgacaattatcaaacagaataacatgacatatcaacataaa 3573203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 27088506 - 27088462
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||| |||||||||||| |||||||||| |||||||||||||||    
T  27088506 taacataacaattatcaaacaaaataacat-acatatcaacataaa 27088462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 30115425 - 30115462
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  30115425 caattatcaaacaaaataacatagcatatcaacataaa 30115462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 6369623 - 6369700
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||| |||||||||| |||||||||| |||||||||  ||  ||||||||||||||    ||||||||| ||||||||    
T  6369623 ttttcattaacatgataattatcaaacaaaataacacgacgcatcaacataaagtaattttttacattttggacgggt 6369700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 8916098 - 8915977
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| |||||||| |||  ||||||     
T  8916098 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtggg 8915999  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  8915998 tacctatatacctgttacccgt 8915977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 24414293 - 24414172
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  24414293 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggg 24414194  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  24414193 tacctatatacctgttacccgt 24414172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 207
Target Start/End: Original strand, 10920573 - 10920757
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||| | || ||||| |||  |||||||    
T  10920573 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtgga 10920672  T
Q  121 tatctatatatctgt----tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaacc 207  Q
    || ||||||||| ||    ||| ||||||||||  ||||  |||      ||||||||||||||| ||||||| |||||| ||||||||||    
T  10920673 tacctatatatccgtcccatactcgtgttttgagatcggaaaaa------atccatacccatacccaaacccagtcaaaacggggaaaacc 10920757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 37999411 - 37999501
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||||||    
T  37999411 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgagtt 37999501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 9632314 - 9632423
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||  |||||||    
T  9632314 tttttattaacatgacaattataaaaaaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtgga 9632413  T
Q  121 tatctatata 130  Q
    || |||||||    
T  9632414 tacctatata 9632423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 215
Target Start/End: Complemental strand, 13705522 - 13705316
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    || ||||||||||||||| |  ||||| |||  ||||||     
T  13705522 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaatttttcacatttgggacgggtttaggtatgggttcggggtggg 13705423  T
Q  121 tatctatata-----------tctgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccg 208  Q
    || |||||||           |||  ||||||||||||||| |||||||||||  ||| ||||||||||||| ||||||  |||||| |||||||| |||    
T  13705422 tacctatatacccgttacctgtctcatacccgtgttttgaaatcggggaaaactcatacccatacccatacccaaaccctgtcaaaacggggaaaacccg 13705323  T
Q  209 tcaaatt 215  Q
    |||||||    
T  13705322 tcaaatt 13705316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 36128268 - 36128181
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||| || |||||    
T  36128268 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatg 36128181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 30846873 - 30846995
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     |||||| ||||||||||| || ||||| |||  ||||||    
T  30846873 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacaattgggacgggtttgggtatgggttcggggtgg 30846972  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  30846973 gtacctatatacccgttacccgt 30846995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 10208591 - 10208505
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    |||||||||||||| ||| ||||||||    
T  10208591 tttttattaacatgacaattatcaaacaaaataacataacatattaacataaagtaattttttacatttgggactggtttgagtatg 10208505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 13830664 - 13830750
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||| ||| ||||||||    
T  13830664 tttttatttacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacaggtttgagtatg 13830750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 12193988 - 12193908
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||||||    
T  12193988 tttttattaacatgataattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatg 12193908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 42798150 - 42798095
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42798150 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagta 42798095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 45115486 - 45115607
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg-tgga 120  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||    ||||||||||||| |||| | | |||| ||| ||| |||     
T  45115486 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataatgtaattttttacatttgggatgggtttaactatgggttcgggatggg 45115585  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| |||||||||||    
T  45115586 tacctatatacctgttacccgt 45115607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 37106627 - 37106706
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||    |||||||||||||||||||||    
T  37106627 tttttattaacatgacaattatcaaacaaaataacat-atatatcaacataaagtaattttttacatttgggacgggtatg 37106706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 45256751 - 45256828
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||||||||||||||||||||||||| |||||||||  ||||||||| ||||||||    ||||||||||||||||||    
T  45256751 tttttattaacatgacaattatcaaacaaaataacaagacatatcaaaataaagtaattttttacatttgggacgggt 45256828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 7314809 - 7314723
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||||| | |||||||| |||||||||| ||||||||||||||| ||    |||||||||||||||||| || |||||    
T  7314809 tttttattaacatgatatttatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtgtgggtatg 7314723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 18106251 - 18106199
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  18106251 tttttattaacatgacaattatcaaacaaaataacataatgtatcaacataaa 18106199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 10208438 - 10208383
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagtttggt 224  Q
    ||||||||||||| ||||||| |||||| |||||||||||||||||||| ||||||    
T  10208438 ccatacccatacccaaacccagtcaaaacggggaaaaccgtcaaattaactttggt 10208383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 44746270 - 44746178
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagt-attt---acatttgggacgggtatgagtatgagtttg 114  Q
    ||||||| | ||| ||||| |||||||||||||||||  |||||||| ||||||| ||||   ||||||||||||||| ||||||||||||||    
T  44746270 tttttataaccattacaatgatcaaataaaataacatggcatatcaagataaagtgattttctacatttgggacgggtttgagtatgagtttg 44746178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 14540716 - 14540764
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  14540716 taacacgacaattatcaaacaaaataacatgacatatcaacataaagta 14540764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 37472890 - 37472853
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacata 63  Q
    |||||||||||||||||||||||||| |||||||||||    
T  37472890 tttttattaacatgacaattatcaaacaaaataacata 37472853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 16226881 - 16226833
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| |||||||||||||||||||||||| ||| |||||||| |||||    
T  16226881 taacacgacaattatcaaataaaataacatgacaaatcaacatgaagta 16226833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 36128113 - 36128058
Alignment:
Q  170 catacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||||| ||||||| |||||| |||||||| ||||||||||| |||||||    
T  36128113 catacccatacccaaacccagtcaaaacggggaaaatccgtcaaattaggtttggt 36128058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 37106746 - 37106829
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||||| |||||||||||      ||||||||||||| |||| || |||||| |||||||| ||||||||||  |||||||    
T  37106746 tacccgtgttttgaaatcggggaaaac------ccatacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgggtttggt 37106829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 9632467 - 9632523
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||  |||||||||||||| ||| |||| |||||||||| ||||||||    
T  9632467 ccatacccatactcaaacccattcaaaacgggaaaaacccgtcaaattgagtttggt 9632523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 13830816 - 13830872
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  13830816 ccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggt 13830872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 30847027 - 30847083
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  30847027 ccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 30847083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 31942340 - 31942292
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| ||||||||||  ||||||| |||||||||    
T  31942340 taacacgacaattatcaaacaaaataacatggcatatcagcataaagta 31942292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 9e-27; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 24236922 - 24236713
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| |||||||| |||  ||||||     
T  24236922 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgagtatgggttcggggtggg 24236823  T
Q  121 tatctatatatctgt-----------tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccg 208  Q
    || ||||||| | ||           ||||||||||||||  |||||||||||      ||||||||||||||||||||| |||||| ||| |||| |||    
T  24236822 tacctatatacccgttccccgttccatacccgtgttttgagatcggggaaaac------ccatacccatacctaaacccagtcaaaacgggaaaaacccg 24236729  T
Q  209 tcaaattaagtttggt 224  Q
    ||||||| ||||||||    
T  24236728 tcaaattgagtttggt 24236713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 40087624 - 40087534
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||    |||||||||||||||||||||||||||||||    
T  40087624 tttttattaacatgacaattatcaaacaaaataacatgatatatcaacataaagtaattttttacatttgggacgggtatgagtatgagtt 40087534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 38 - 224
Target Start/End: Original strand, 13390353 - 13390533
Alignment:
Q  38 tgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtggatatctatatatc 132  Q
    |||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| |||||||||  |||||| || ||||||| |    
T  13390353 tgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatgagttcggggtgggtacctatatacc 13390452  T
Q  133 tgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagtttggt 224  Q
     ||     |||||||||| |||||||||      || |||||||||||| ||||||| |||||| ||||||| ||||||||||  |||||||    
T  13390453 cgt-----gtgttttgaaatcggggaaa------attcatacccatacccaaacccagtcaaaacggggaaacccgtcaaattgggtttggt 13390533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 23966800 - 23966887
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatg 108  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||||||||||||    
T  23966800 tttttataaacatgacaattatcaaacaaaataacataacatatcaacataaagtaatttttttacatttgggacgggtatgagtatg 23966887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 183
Target Start/End: Complemental strand, 45866346 - 45866173
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagttt-gggtgga 120  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    ||||||||||||| ||||||| |||||||||| ||||||     
T  45866346 tttttattaacatgataattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggatgggtatgggtatgagtttggggtggg 45866247  T
Q  121 tatctatata-----------tctgttacccgtgttttgaattcggggaaaacctatatccatacccataccta 183  Q
    || |||||||           |||  ||||||||||||||| |||||||||||| ||| ||||||||| |||||    
T  45866246 tacctatatactcattacctgtctcatacccgtgttttgaaatcggggaaaacccatacccatacccaaaccta 45866173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 19572673 - 19572464
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||| ||||||||||| |||||||||| ||||||||||||||| ||    ||||||||||||||||||||||||||| |||  ||||||     
T  19572673 tttttattaacatggcaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatgagtatgggttcggggtggg 19572574  T
Q  121 tatctatatatctgt-----------tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccg 208  Q
    || ||||||| | ||           ||||||||||||||| ||||| |||||      ||||||||||||| ||||||| |||||| |||||||| |||    
T  19572573 tacctatatacccgttacctgtcccatacccgtgttttgaaatcgggaaaaac------ccatacccatacccaaacccagtcaaaatggggaaaacccg 19572480  T
Q  209 tcaaattaagtttggt 224  Q
    |||||||| |||||||    
T  19572479 tcaaattaggtttggt 19572464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 36187381 - 36187260
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || ||||| |||  ||||||     
T  36187381 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataactttttacatttgggacgggtttgggtatgggttcagggtggg 36187282  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  36187281 tacctatatacccgttacccgt 36187260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 17092120 - 17092040
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||||||    
T  17092120 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatg 17092040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 20774560 - 20774647
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||| || |||||    
T  20774560 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatg 20774647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 50426816 - 50426736
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||||||    
T  50426816 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaaatttttacatttgggacgggtatg 50426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 28297861 - 28297983
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     |||||||||||||||||| || ||||| |||  ||||||    
T  28297861 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgg 28297960  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  28297961 gtacctatatacccgttacccgt 28297983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 24710786 - 24710872
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    |||||||||||||||||| ||||||||    
T  24710786 tttttattaacatgacaattatcaaacaaaataacataatgtatcaacataaagtaattttttacatttgggacgggtttgagtatg 24710872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 34611001 - 34611087
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    |||||||||||||||||| || |||||    
T  34611001 tttttattaacatgacaattatcaaacaaaataatataacatatcaacataaagtagtattttacatttgggacgggtttgggtatg 34611087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 29936344 - 29936465
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  29936344 tttttattaacatgacaattataaaaaaaaataacattacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggg 29936443  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  29936444 tacctatatacccgttacccgt 29936465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 130
Target Start/End: Complemental strand, 49250934 - 49250825
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttg-ggtgga 120  Q
    ||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||    |||||||||||||||||| || ||||| ||| | ||||||    
T  49250934 tttttatcaacatgacaattatcaaacaaaatagcataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgggttcgaggtgga 49250835  T
Q  121 tatctatata 130  Q
    || |||||||    
T  49250834 tacctatata 49250825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 42439831 - 42439776
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42439831 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagta 42439776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 42707991 - 42707911
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    |||||||||||||||||||||    
T  42707991 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatg 42707911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 17134875 - 17134961
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||| ||||||| ||||| |||||    
T  17134875 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatatgggacgagtatgggtatg 17134961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 51421786 - 51421872
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||    |||||||||||||||||| || |||||    
T  51421786 tttttattaacatggcaattatcaaacaaaataacataacatatcaacatagagtaattttttacatttgggacgggtttgggtatg 51421872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 18354241 - 18354156
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtat 107  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    ||||||||||||||| ||||| ||||    
T  18354241 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgagtatgggtat 18354156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 5180973 - 5181053
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    ||||||||||| |||||||||    
T  5180973 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttggaacgggtatg 5181053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 3628148 - 3628060
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta------tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||      |||||||||||||| || |||||||||    
T  3628148 tttttattaacatgataattatcaaacaaaataacatgacatatcaacataaagtaattttttttacatttgggactggaatgagtatg 3628060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 102
Target Start/End: Complemental strand, 34060180 - 34060100
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||     |||||| ||||||||||||||    
T  34060180 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaagtaatttttttacaattgggacgggtatg 34060100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 39616231 - 39616317
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||||| ||||| |||| |||||||||| ||||||||||||||| ||    ||||||||||||||||||||| |||||    
T  39616231 tttttattaacatgataattagcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggtatgggtatg 39616317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 142
Target Start/End: Complemental strand, 44615630 - 44615515
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagttt-gggtggatatcta 126  Q
    ||||| ||||||||||||| ||||||||||  |||||||| ||||||||     |||  ||||||||||||| || |||||||||| |||||| || |||    
T  44615630 taacacgacaattatcaaacaaaataacatggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtaccta 44615531  T
Q  127 tatatctgttacccgt 142  Q
    |||| |||||||||||    
T  44615530 tatacctgttacccgt 44615515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 44792939 - 44793054
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagttt-gggtggatatcta 126  Q
    ||||| ||||||||||||| ||||||||||  |||||||| ||||||||     |||  ||||||||||||| || |||||||||| |||||| || |||    
T  44792939 taacacgacaattatcaaacaaaataacatggcatatcaagataaagtagtttttttggatttgggacgggtttgggtatgagtttggggtgggtaccta 44793038  T
Q  127 tatatctgttacccgt 142  Q
    |||| |||||||||||    
T  44793039 tatacctgttacccgt 44793054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 23490926 - 23490855
Alignment:
Q  32 ttaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||| ||    ||||||||||||||||||    
T  23490926 ttaagatgacaattatcaaacaaaataacataacatatccacataaattagttttttacatttgggacgggt 23490855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 16408874 - 16408916
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacata 68  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  16408874 tttttattaacatgacaattatcaaacaaaataacatgacata 16408916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 16433311 - 16433270
Alignment:
Q  40 acaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||| |||||||||| ||||||||||||||||||    
T  16433311 acaattatcaaacaaaataacatgacatatcaacataaagta 16433270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 5181120 - 5181176
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||| | ||||||    
T  5181120 ccatacccatacctaaacccagtcaaaatggggaaaacccgtcaaattgaatttggt 5181176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 49741153 - 49741113
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||||||||| |||||||||||    
T  49741153 caattatcaaacaaaataacataacatattaacataaagta 49741113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 24160033 - 24159994
Alignment:
Q  37 atgacaattatcaaataaaataacataacatatcaacata 76  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  24160033 atgacaattatcaaatcaaataacatgacatatcaacata 24159994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 35936962 - 35936923
Alignment:
Q  42 aattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  35936962 aattatcaaacaaaataacatgacatatcaacataaagta 35936923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 23968633 - 23968716
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||||||||  |||||||||||      |||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  23968633 tacccgtgttttgaaaccggggaaaacc------catacccatacccaaacccaatcaaaatggggaaaatccgtcaaattgggtttggt 23968716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 112
Target Start/End: Complemental strand, 29871439 - 29871356
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||  |||||||||| |||||||||| ||||||||||||||| ||    | |||||| ||||||||| || |||||||||    
T  29871439 taacatgggaattatcaaacaaaataacatgacatatcaacataaaataattttctacattcgggacgggtttgggtatgagtt 29871356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 49741024 - 49740978
Alignment:
Q  179 acctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  49741024 acctaaacccagtcaaaaaggggaaaatccgtcaaattgagtttggt 49740978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 9983044 - 9982996
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||| |||||||||| |||||||||| | |||| |||||||||||    
T  9983044 taacatgagaattatcaaacaaaataacatgatatattaacataaagta 9982996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 13020616 - 13020648
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaata 58  Q
    |||||||||||||||||||||||||| ||||||    
T  13020616 tttttattaacatgacaattatcaaacaaaata 13020648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 34673428 - 34673388
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  34673428 caattatcaaacaaaataacatggcatatcaacataaagta 34673388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 17851786 - 17851907
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg-tgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||||||| |||| || ||||| ||| ||| |||     
T  17851786 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggatgggtttgggtatgggttcgggatggg 17851885  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||||| |||||||||    
T  17851886 tacctatatatccgttacccgt 17851907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 18125389 - 18125268
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  18125389 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatgcgttcggggtggg 18125290  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  18125289 tacctatatacccgttacccgt 18125268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 37196159 - 37195961
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtat-gagtttgggtgga 120  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    |||||||||  ||||||| || |||| || |  ||||||     
T  37196159 tttttattaacatgacagttatcaaacaaaataacataacatatcaacataaagtaattttttacatttatgacgggtttgggtatggattcggggtggg 37196060  T
Q  121 tatctatatatctgttacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaa-aggggaaaaccgtcaaattaagt 219  Q
    || ||||||| |  ||||| |||||||||| |||||||||      ||||||||||||||| ||||| | |||||| |||| ||| |||||||||| |||    
T  37196059 tagctatatacccattacctgtgttttgaaatcggggaaa------atccatacccatacccaaacctaatcaaaacagggaaaatccgtcaaattgagt 37195966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 35074401 - 35074523
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtttggg-tgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||     |||||||||||||||||| || ||||| ||| ||| |||    
T  35074401 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagtttttttacatttgggacgggtttgggtatgggttcgggttgg 35074500  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  35074501 gtacctatatacccgttacccgt 35074523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 39456174 - 39455967
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta---tttacatttgggacgggtatgagtatgagtttgggtggata 122  Q
    ||||||||| |||| ||||||||||| |||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||  |  |||||| ||    
T  39456174 tttttattaccatggcaattatcaaacaaaataacatgacatatcaacataaagtaatttttacatttgggacgggtatgagtatggttcggggtgggta 39456075  T
Q  123 tctatatatctgttacccg-----------tgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaac-cgtc 210  Q
     ||||||| | ||||||||           ||||||||| |||||||||||| ||||||||||||      ||||||| |||||| ||||||||| ||||    
T  39456074 cctatatacccgttacccgtcccatacccatgttttgaaatcggggaaaacccatatccataccc------aaacccagtcaaaacggggaaaactcgtc 39455981  T
Q  211 aaattaagtttggt 224  Q
    |||||  |||||||    
T  39455980 aaattgggtttggt 39455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 44734518 - 44734432
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    |||||||||||||||| |||| |||||    
T  44734518 tttttattaacatgacaattatcaaataaaataacatgacatatcaacataaagtaattttttacatttgggacggatatgtgtatg 44734432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 21702591 - 21702668
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||||||||||||    
T  21702591 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggt 21702668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 130
Target Start/End: Original strand, 16811662 - 16811770
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtggat 121  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||    |||||||||||||||| | || ||||| ||| |||||| |    
T  16811662 tttttattaacatggcaattatcaaacaaaataacataatatatcaacataaagtaattttttacatttgggacggctttgggtatgggttcgggtgggt 16811761  T
Q  122 atctatata 130  Q
    |||||||||    
T  16811762 atctatata 16811770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 45709023 - 45708905
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-tttacatttgggacgggtatgagtatgagtt-tgggtggatat 123  Q
    |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||| |  |||||||||  |||||| ||     
T  45709023 tttttattaatatgacaattatcaaacaaaataatataacatatcaacataaagtattttacattttggacgggtttaggtatgagttcggggtgggtac 45708924  T
Q  124 ctatatatctgttacccgt 142  Q
    ||||||| | |||||||||    
T  45708923 ctatatacccgttacccgt 45708905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 16866101 - 16866187
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||    
T  16866101 tttttattaacatggcaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatg 16866187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 17885397 - 17885483
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||    ||||||||||||||||||||| |||||    
T  17885397 tttttattgacatgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatg 17885483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 24753107 - 24753193
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || |||||    
T  24753107 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgggtatg 24753193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 3227107 - 3226986
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    ||||||||||||| | ||||||||||| |||  ||||||     
T  3227107 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggatgtgtatgagtatgggttcggggtggg 3227008  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||  |||||||||||    
T  3227007 tacctatattcctgttacccgt 3226986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 224
Target Start/End: Original strand, 7779940 - 7780149
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg-tgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || ||||  ||| ||| |||     
T  7779940 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataaatttttacatttgggacgggtttgggtataggttcggggtggg 7780039  T
Q  121 tatctatata-------tctgt----tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccg 208  Q
    || |||||||       || ||    ||||||||||||||  ||||||||||||      |||||||||||| ||||||| |||||| |||||||| |||    
T  7780040 tacctatatacccattatccgtcccatacccgtgttttgagatcggggaaaacc------catacccatacccaaacccagtcaaaacggggaaaatccg 7780133  T
Q  209 tcaaattaagtttggt 224  Q
    ||||||| ||||||||    
T  7780134 tcaaattgagtttggt 7780149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 30650563 - 30650684
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||| | || ||||| |||  ||||||     
T  30650563 tttttattaacatggcaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacggatttgggtatgggttcggggtggg 30650662  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  30650663 tacctatatacccgttacccgt 30650684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 44986059 - 44985912
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacata---aagtatttacatttgggacgggtatgagtatgagtttgggtggata 122  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||   || | ||||||||||||||||||||||||     |  | |||| ||    
T  44986059 tttttattaacatgacaattatcaaacaaaataacat-acatatcaacataaataattttttacatttgggacgggtatgagt-----tcggagtgggta 44985966  T
Q  123 tctatatatctgttacccgtgttttgaattcggggaaaacctatatccataccca 177  Q
    | |||||| | |||||||||| |||||| |||| ||||||| |||||||||||||    
T  44985965 tttatatacccgttacccgtg-tttgaaatcggagaaaacccatatccataccca 44985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 45885926 - 45885851
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgg 97  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    ||||||||||||||||    
T  45885926 tttttattaacatggcaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgg 45885851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 25905560 - 25905634
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacg 96  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||    
T  25905560 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacg 25905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 37182207 - 37182293
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacata----aagtatttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||    || | ||||||||||||||||||||| |||||    
T  37182207 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataagataattttttacatttgggacgggtatgggtatg 37182293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 112
Target Start/End: Original strand, 39316927 - 39317017
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    |||||||||| ||||| |||| |||||||||    
T  39316927 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgagacggatatgggtatgagtt 39317017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 41741610 - 41741513
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttgggtgg 119  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||  ||||||||    |||||||||||||||||||||| |||| ||| ||||||    
T  41741610 tttttattaacatgataattatcaaacaaaataacatgacatatcagtataaagtaattttttacatttgggacgggtatgaatatgggttcgggtgg 41741513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 84
Target Start/End: Complemental strand, 44658610 - 44658552
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtattt 84  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||    
T  44658610 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaatattt 44658552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 44794188 - 44794102
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||| ||| || |||||    
T  44794188 tttttagtaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacaggtttgggtatg 44794102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 45380038 - 45380093
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||||||||||||||||||||| |||||||||| |||| |||||||||||||    
T  45380038 tttttattaacatgacaattatcaaacaaaataacatgacatgtcaacataaagta 45380093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 142
Target Start/End: Complemental strand, 25980078 - 25979957
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagttt-gggtgga 120  Q
    ||||||||||||||| |||||||||| |||||||||| |||| |||||||||| ||    ||||||||||| | || | || |||||||||| ||||||     
T  25980078 tttttattaacatgataattatcaaacaaaataacatgacatttcaacataaaataattttttacatttggaaaggatttgggtatgagtttggggtggg 25979979  T
Q  121 tatctatatatctgttacccgt 142  Q
    ||  |||||||| |||||||||    
T  25979978 tacatatatatccgttacccgt 25979957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 38139954 - 38139902
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  38139954 tttttattaacatgacaattatcaaacaaaataacatgacatatcaatataaa 38139902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 18825907 - 18825818
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||||| |||||||||||| | | ||| ||||  ||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  18825907 tacccgtgttttgaaatcggggaaaacccaaacccacaccctcacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 18825818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 38152945 - 38153027
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagtttggt 224  Q
    ||||| ||||||||| ||||||||||||      |||||||||||| ||||||| |||||| ||| ||| |||||||||| ||||||||    
T  38152945 tacccatgttttgaaatcggggaaaacc------catacccatacccaaacccagtcaaaacgggaaaatccgtcaaattgagtttggt 38153027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 37579201 - 37579249
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||||||||||| ||||||||||  |||| ||||||||||||    
T  37579201 taacatgacaattatcaaacaaaataacatggcatagcaacataaagta 37579249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 38152835 - 38152896
Alignment:
Q  42 aattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||||||||| |||||||||| ||||||||||||||| ||    ||||||||||||||||||    
T  38152835 aattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacgggt 38152896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 41103592 - 41103640
Alignment:
Q  30 tattaacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||||||||||||||||||| |||||||||  | |||||||||||||    
T  41103592 tattaacatgacaattatcaaacaaaataacaagagatatcaacataaa 41103640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 25905713 - 25905760
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaacc-gtcaaatt 215  Q
    ||||||||||||| ||||||| ||||||||||||||||| ||||||||    
T  25905713 ccatacccatacccaaacccagtcaaaaaggggaaaacctgtcaaatt 25905760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 30650717 - 30650772
Alignment:
Q  170 catacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||||||||||||| |||||| |||||||| ||||||||||  |||||||    
T  30650717 catacccatacctaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 30650772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 224
Target Start/End: Original strand, 10072429 - 10072607
Alignment:
Q  57 taacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtggatatctatatatctgt-----------taccc 140  Q
    |||||| ||||||||||||||||||    |||||||||||||||| |||| ||||| |||  |||||| || ||||||| | ||           |||||    
T  10072429 taacatgacatatcaacataaagtaattttttacatttgggacggttatgggtatgggttcggggtgggtacctatatacccgttacccgttccataccc 10072528  T
Q  141 gtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||| |||||||||||      ||||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  10072529 gtgttttgaaatcggggaaaac------ccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 10072607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 81
Target Start/End: Complemental strand, 26004620 - 26004578
Alignment:
Q  39 gacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||||| ||||||||||  |||||||||||||||||    
T  26004620 gacaattatcaaacaaaataacatggcatatcaacataaagta 26004578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 3920477 - 3920522
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||||| ||||||||||| ||||||||||  ||||||||||||||    
T  3920477 taacatggcaattatcaaacaaaataacatggcatatcaacataaa 3920522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 43507365 - 43507402
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacata 63  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  43507365 tttttattaatatgacaattatcaaacaaaataacata 43507402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Complemental strand, 2630720 - 2630680
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  2630720 caattatcaaacaaaataacatggcatatcaacataaagta 2630680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 5377024 - 5377072
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| ||||| |||| | ||||||||||||||||    
T  5377024 taacacgacaattatcaaacaaaattacatgatatatcaacataaagta 5377072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 16078952 - 16079000
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| ||||||||||  ||||||||| |||||||    
T  16078952 taacacgacaattatcaaacaaaataacatggcatatcaacgtaaagta 16079000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 27850480 - 27850432
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| |||||||||| |||||||| | |||||||    
T  27850480 taacacgacaattatcaaacaaaataacatgacatatcatcgtaaagta 27850432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 27738699 - 27738820
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  27738699 tttttattaacatgacaattatcatacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggg 27738798  T
Q  121 tatctatatatctgttacccgt 142  Q
    ||  ||||||||||||||||||    
T  27738799 tacatatatatctgttacccgt 27738820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 5863544 - 5863335
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttg-ggtgga 120  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || ||||| ||| | |||||     
T  5863544 tttttattaacatgataattatcaaacaaaataacataacatatcaacataaaatatttttttacatttgggacgggtttgggtatgggttcgaggtggg 5863445  T
Q  121 tatctatatatctgt-----------tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccg 208  Q
    |||||||||| | ||           ||||||||||||||| |||||||||||      ||||||||||||| ||||||| |||||| |||||||| |||    
T  5863444 tatctatatacccgttacccgtcccatacccgtgttttgaaatcggggaaaac------ccatacccatacccaaacccagtcaaaacggggaaaacccg 5863351  T
Q  209 tcaaattaagtttggt 224  Q
    |||||||  |||||||    
T  5863350 tcaaattgggtttggt 5863335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 27534611 - 27534697
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||    
T  27534611 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggtttgggtatg 27534697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 224
Target Start/End: Original strand, 24225625 - 24225840
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||| || | ||| |||  ||||||     
T  24225625 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacgggtttgggcatgggttcggggtggg 24225724  T
Q  121 tatctatatatctgttac-----------ccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaacc-g 208  Q
    || ||||||| | |||||           |||||||||||  |||||||||| | ||| ||||||||| ||| ||||||| |||||| |||||||||| |    
T  24225725 tacctatatacccgttacccgtcccatatccgtgttttgagatcggggaaaatccatacccatacccaaacccaaacccaatcaaaacggggaaaacctg 24225824  T
Q  209 tcaaattaagtttggt 224  Q
    ||||||| | ||||||    
T  24225825 tcaaattgaatttggt 24225840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 32853771 - 32853892
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  32853771 tttttattaacatggcaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatgggttcggggtggg 32853870  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  32853871 tacctatatacccgttacccgt 32853892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 224
Target Start/End: Complemental strand, 10188234 - 10188032
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||||||||| ||    ||||||||||||| |||| || ||||| |||  ||||||     
T  10188234 tttttattaacatgacaattatcgaacaaaataacataatatatcaacataaaataattttttacatttgggatgggtttgggtatgggttcggggtggg 10188135  T
Q  121 tatctatatatctgt----tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaatt 215  Q
    || ||||||| | ||    ||||||||||||||  |||||||||||      ||||||||||||| ||||||| |||||| |||||||| ||||||||||    
T  10188134 tacctatatacccgtcccatacccgtgttttgagatcggggaaaac------ccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaatt 10188041  T
Q  216 aagtttggt 224  Q
      |||||||    
T  10188040 gggtttggt 10188032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 10142679 - 10142589
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||    |||||||||||||| ||| || |||||||||    
T  10142679 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaataattttttacatttgggacaggtttgggtatgagtt 10142589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 2367253 - 2367339
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    ||| |||||||||||||| || |||||    
T  2367253 tttttattaacatgacaattatcaaacaaaataacataacatatccacataaagtaattttttccatttgggacgggtttgggtatg 2367339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 32053015 - 32053109
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtttggg 116  Q
    ||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    ||||||||| |||||||| || ||||| |||||||    
T  32053015 tttttattaacatgataattatcaaacaaaataacatgacatatcaacataaagtatttttttacattttggacgggtttgggtatgggtttggg 32053109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 3484084 - 3483965
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  3484084 tttttattaagatgacaattatgaaacaaaataacataacatatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggg 3483985  T
Q  121 tatctatatatctgttaccc 140  Q
    || ||||||| | |||||||    
T  3483984 tacctatatacccgttaccc 3483965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 12141312 - 12141398
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||| ||||||||||||||| ||||||||||||| |||||||||||| ||    |||||||||||||||||| || |||||    
T  12141312 tttttattaagatgacaattatcaaacaaaataacataacgtatcaacataaaataattttttacatttgggacgggtttgggtatg 12141398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 215
Target Start/End: Original strand, 12309510 - 12309705
Alignment:
Q  37 atgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtggatatctatatat 131  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||| || ||||  |||  |||||| ||  ||||||     
T  12309510 atgacaattatcaaacaaaataacatgacatatcaacataaagtaattttttacatttgggacgggtttgggtatcggttcggggtgggtacatatatac 12309609  T
Q  132 ctgt-----------tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaac-cgtcaaatt 215  Q
    ||||           ||||||||||||||| || ||||| ||| ||| ||||||||| ||| ||||||| |||||| ||||||||| |||||||||    
T  12309610 ctgttacccgttccatacccgtgttttgaaatcagggaatacccatacccatacccaaacccaaacccagtcaaaatggggaaaactcgtcaaatt 12309705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 14032497 - 14032569
Alignment:
Q  40 acaattatcaaataaaataacataacatatcaacataaagta--ttta--catttgggacgggtatgagtatg 108  Q
    |||||||||||| |||||||||| ||||||||||||||||||  ||||  |||||||||||||| || |||||    
T  14032497 acaattatcaaacaaaataacatgacatatcaacataaagtaattttatgcatttgggacgggtttgggtatg 14032569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Original strand, 32532498 - 32532553
Alignment:
Q  57 taacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||| ||||||||||||||||||    |||||||||||||||||||||||||||    
T  32532498 taacatgacatatcaacataaagtaattttttacatttgggacgggtatgagtatg 32532553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 15498377 - 15498418
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccataccca 177  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  15498377 tacccgtgttttgaaatcggggaaaacccatatccataccca 15498418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 27534765 - 27534820
Alignment:
Q  170 catacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||||| ||||||||    
T  27534765 catacccatacccaaacccaatcaaaacggggaaaacccgtcaaattgagtttggt 27534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 31496515 - 31496570
Alignment:
Q  170 catacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||||| ||||||||    
T  31496515 catacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggt 31496570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 31501901 - 31501956
Alignment:
Q  170 catacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    |||||||||||| ||||||| |||||| |||||||| |||||||||| ||||||||    
T  31501901 catacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgagtttggt 31501956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 30986306 - 30986389
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||||  ||||||||||||      |||||||||||| |||| || |||||| |||||||| |||||||||| ||||||||    
T  30986306 tacccgtgttttgagatcggggaaaacc------catacccatacccaaactcagtcaaaacggggaaaacccgtcaaattgagtttggt 30986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 142
Target Start/End: Original strand, 11762379 - 11762493
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtggatatctat 127  Q
    ||||| |||||||||  || ||||||||||  |||||||||||||||||    | ||||||||||| |||| || |||||||||  ||||||| | ||||    
T  11762379 taacacgacaattatataacaaaataacatggcatatcaacataaagtaattttctacatttgggatgggtttgggtatgagttcggggtggacacctat 11762478  T
Q  128 atatctgttacccgt 142  Q
    ||| | |||||||||    
T  11762479 atacccgttacccgt 11762493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 12678248 - 12678203
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||| ||||||||||||| |||||||||| ||||||||| |||||    
T  12678248 taacacgacaattatcaaacaaaataacatgacatatcaatataaa 12678203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 14506020 - 14506068
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| ||||||||||||| |||||||| | ||||||||||| ||||||    
T  14506020 taacacgacaattatcaaacaaaataacgtgacatatcaacacaaagta 14506068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 30816199 - 30816239
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    |||||||| || |||||||||| ||||||||||||||||||    
T  30816199 caattatccaacaaaataacatcacatatcaacataaagta 30816239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 2075995 - 2075909
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||||||| || |||||    
T  2075995 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtaattttttacatttgggacgggtttgggtatg 2075909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 224
Target Start/End: Original strand, 27932340 - 27932549
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||    |||||||||||||||| |||||||||| |||  ||||||     
T  27932340 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaaataattttttacatttgggacggatatgagtatgggttcggggtggg 27932439  T
Q  121 tatctatatatctgt-----------tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccg 208  Q
    || ||||||| | ||           ||||||||||||||| |||||||||||      ||||||||||||| ||||||| |||||| |||||||| |||    
T  27932440 tacctatatacccgttactcgtcccatacccgtgttttgaaatcggggaaaac------ccatacccatacccaaacccagtcaaaacggggaaaacccg 27932533  T
Q  209 tcaaattaagtttggt 224  Q
    |||||||  |||||||    
T  27932534 tcaaattgggtttggt 27932549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 28977275 - 28977198
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||||||||||||    
T  28977275 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaagtagttttttacatttgggacgggt 28977198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 17220644 - 17220724
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    |||||||||||||||||||||    
T  17220644 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtaatcttttacatttgggacgggtatg 17220724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 32302987 - 32303109
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta-----tttacatttgggacgggtatgagtatgagtt-tgggtgg 119  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||     |||||||||||||||||| || ||||| |||  ||||||    
T  32302987 tttttattaacatgacaattatcaaacaaaataacataacatatcaacataaaatagtttttttacatttgggacgggtttgggtatgggttcggggtgg 32303086  T
Q  120 atatctatatatctgttacccgt 142  Q
     || ||||||| | |||||||||    
T  32303087 gtacctatatacccgttacccgt 32303109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 29108983 - 29108897
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| ||||||| || ||||||||||||||||||    ||||||||||||||||||||| |||||    
T  29108983 tttttattaacatgacaattatcaaacaaaataatatgacatatcaacataaagtaattttttacatttgggacgggtatgggtatg 29108897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 142
Target Start/End: Original strand, 24927876 - 24927997
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagtt-tgggtgga 120  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||    |||||||||||||||||| || ||||| |||  ||||||     
T  24927876 tttttattaagatgacaattatcaaacaaaataacataacatatccacataaagtagttttttacatttgggacgggtttgggtatgggttcggggtggg 24927975  T
Q  121 tatctatatatctgttacccgt 142  Q
    || ||||||| | |||||||||    
T  24927976 tacctatatacccgttacccgt 24927997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 26 - 102
Target Start/End: Original strand, 45235992 - 45236072
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatg 102  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||    |||||||||||||||||||||    
T  45235992 tttttattaacatgataattatcaaacaaaataacataacatatcaacataaattaattttttacatttgggacgggtatg 45236072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 4230880 - 4230794
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||||||||    |||||||||||||||||| || |||||    
T  4230880 tttttattaacatgacaattatcaaacaaaataacataatgtatcaacataaagtaattttttacatttgggacgggtttgggtatg 4230794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 112
Target Start/End: Complemental strand, 39445729 - 39445647
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtatttacatttgggacgggtatgagtatgagtt 112  Q
    |||||||||||||||||||||||||| |||||||||| ||||||| ||||    | ||||||||||||||||||||| |||||||||    
T  39445729 tttttattaacatgacaattatcaaacaaaataacatgacatatctacat----tttttacatttgggacgggtatgggtatgagtt 39445647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 24870184 - 24870108
Alignment:
Q  27 ttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggt 99  Q
    ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||    ||||||||||||||||||    
T  24870184 ttttattaacatgacaattatcaaacaaattaacatgacatatcaacataaagtaattttttacatttgggacgggt 24870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Complemental strand, 11255168 - 11255083
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||    ||||||||||||||||||||| |||||    
T  11255168 tttttattaatatgacaattatcaaacaaaataacat-acatatcaacacaaagtaattttttacatttgggacgggtatgggtatg 11255083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 34776993 - 34777045
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    |||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  34776993 tttttattaacattgcaattatcaaacaaaataacataacatatcaacataaa 34777045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 1063434 - 1063489
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||    
T  1063434 tttttatcaacatgacaattatcaaacaaaataacaagacatatcaacataaagta 1063489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 1063560 - 1063631
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaacc 207  Q
    ||||||||||||||| ||||| |||||| ||| ||||||||| ||| | ||||| |||||| ||||||||||    
T  1063560 tacccgtgttttgaaatcgggaaaaacccatacccatacccacacccacacccagtcaaaacggggaaaacc 1063631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 24569016 - 24569073
Alignment:
Q  167 atccatacccatacctaaacccattcaaaaaggggaaaaccgtcaaattaagtttggt 224  Q
    ||||||||||||||||||||||| |||||  ||| ||| ||||||||||| |||||||    
T  24569016 atccatacccatacctaaacccaatcaaacggggaaaacccgtcaaattaggtttggt 24569073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 43113780 - 43113732
Alignment:
Q  33 taacatgacaattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||| |||||||||| || ||||||||||||||||||||||| |||||    
T  43113780 taacacgacaattatctaacaaaataacataacatatcaacatgaagta 43113732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Complemental strand, 39445611 - 39445528
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||||| ||||| ||||||      |||||||||||| ||||| | |||||| |||||||| |||||||||| ||||||||    
T  39445611 tacccgtgttttgaaatcgggaaaaacc------catacccatacccaaacctagtcaaaacggggaaaatccgtcaaattgagtttggt 39445528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 17469197 - 17469303
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatgagttt-gggtggatatctatatatctgt 135  Q
    ||||||||||| ||||||||||  |||||||||||||||||    | | || ||||||||||| || ||||| |||| |||||| || ||||||| | ||    
T  17469197 caattatcaaacaaaataacatggcatatcaacataaagtagttttctgcagttgggacgggtttgggtatgggtttggggtgggtacctatatacccgt 17469296  T
Q  136 tacccgt 142  Q
    |||||||    
T  17469297 tacccgt 17469303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 34021416 - 34021456
Alignment:
Q  37 atgacaattatcaaataaaataacataacatatcaacataaa 78  Q
    ||||||||||||||| |||||||||| |||||||||||||||    
T  34021416 atgacaattatcaaacaaaataacat-acatatcaacataaa 34021456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Complemental strand, 40248406 - 40248365
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccataccca 177  Q
    ||||||||||||||| ||||||||||| |||| |||||||||    
T  40248406 tacccgtgttttgaaatcggggaaaacatatacccataccca 40248365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 1012559 - 1012599
Alignment:
Q  41 caattatcaaataaaataacataacatatcaacataaagta 81  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  1012559 caattatcaaacaaaataacatggcatatcaacataaagta 1012599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 4230738 - 4230682
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  4230738 ccatacccatacccaaacccagtcaaaatggggaaaacccgtcaaattgggtttggt 4230682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 24928029 - 24928085
Alignment:
Q  169 ccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagtttggt 224  Q
    ||||||||||||| ||||||| |||||| |||||||| ||||||||||  |||||||    
T  24928029 ccatacccatacccaaacccagtcaaaacggggaaaacccgtcaaattgggtttggt 24928085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 84
Target Start/End: Original strand, 4184 - 4242
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagtattt 84  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  4184 tttttattaacatgacaattatcaaacaaaataacatgacatatcaacataaagtattt 4242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 108
Target Start/End: Original strand, 10225 - 10310
Alignment:
Q  26 tttttattaacatgacaattatcaaataaaataacataacatatcaacataaagta----tttacatttgggacgggtatgagtatg 108  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||| ||||||    ||||||||||||||||||||| |||||    
T  10225 tttttattaatatgacaattatcaaacaaaataacat-acatatcaacacaaagtaattttttacatttgggacgggtatgggtatg 10310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 33446 - 33532
Alignment:
Q  136 tacccgtgttttgaattcggggaaaacctatatccatacccatacctaaacccattcaaaaaggggaaaa-ccgtcaaattaagttt 221  Q
    ||||||||||||||| |||||||||||| | | ||||||||| ||| ||||||  |||||| ||| |||| |||||||||| |||||    
T  33446 tacccgtgttttgaaatcggggaaaacccaaacccatacccaaacccaaacccgatcaaaacgggtaaaacccgtcaaattgagttt 33532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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