View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19680_low_11 (Length: 270)
Name: NF19680_low_11
Description: NF19680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19680_low_11 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 36545372 - 36545626
Alignment:
| Q |
1 |
tgatatgatttgttctttattcttttcagtagatgttctatttgtgtatgtgtttcatttatgtgacaatgatcgtagaaaagggtcttgtggaaaatgt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36545372 |
tgatatgatttgttctttattcttttcagtagatgttctatatgtgtatgtgtttcatttatgtgacaatgatcgtagaaaagggtcttgtggaaaatgt |
36545471 |
T |
|
| Q |
101 |
tcctttcccaattttaaggaaacaacgtagcatgcatactttgtgtgtctattcttattcnnnnnnncttttgtgttcagaagctgaactgaaaatttgt |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
36545472 |
tcctttcccaattttaaggaaacaacgtagcatgcatactttgtgtgtctattcttattctttttttcttttgtgttcagaagctgaactgaaaatttgt |
36545571 |
T |
|
| Q |
201 |
gttttatattcctcttttaaatttgagttcggcttgtattgagttcattgttcat |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36545572 |
gttttatattcctcttttaaatttgagttcggcttgtattgagttcattgttcat |
36545626 |
T |
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