View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19680_low_2 (Length: 536)

Name: NF19680_low_2
Description: NF19680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19680_low_2
NF19680_low_2
[»] chr7 (42 HSPs)
chr7 (1-528)||(37915665-37916203)
chr7 (231-373)||(14741469-14741611)
chr7 (231-373)||(4639789-4639931)
chr7 (444-526)||(14741861-14741942)
chr7 (444-528)||(4639482-4639565)
chr7 (231-297)||(23017035-23017101)
chr7 (231-300)||(21067870-21067939)
chr7 (231-300)||(37328397-37328466)
chr7 (231-300)||(47067200-47067269)
chr7 (231-295)||(44256406-44256470)
chr7 (177-215)||(4639975-4640013)
chr7 (231-300)||(8675821-8675891)
chr7 (177-215)||(14741387-14741425)
chr7 (231-300)||(7993647-7993716)
chr7 (127-176)||(19845407-19845456)
chr7 (231-300)||(29614441-29614510)
chr7 (231-300)||(29893462-29893531)
chr7 (127-176)||(35888558-35888607)
chr7 (259-300)||(39028605-39028646)
chr7 (127-168)||(40299092-40299133)
chr7 (231-300)||(42610660-42610729)
chr7 (127-176)||(47648918-47648967)
chr7 (127-176)||(49044860-49044909)
chr7 (124-176)||(8781949-8782001)
chr7 (231-319)||(21024109-21024197)
chr7 (445-496)||(23017424-23017475)
chr7 (231-285)||(1254471-1254525)
chr7 (231-285)||(19594253-19594307)
chr7 (126-176)||(27813748-27813798)
chr7 (130-176)||(33682959-33683005)
chr7 (231-285)||(34656648-34656702)
chr7 (231-300)||(510136-510205)
chr7 (231-300)||(28342801-28342870)
chr7 (127-176)||(32643544-32643593)
chr7 (231-300)||(39784597-39784666)
chr7 (231-300)||(40460360-40460429)
chr7 (231-300)||(41827818-41827887)
chr7 (127-168)||(42887820-42887861)
chr7 (135-176)||(43934837-43934878)
chr7 (264-300)||(3023457-3023493)
chr7 (260-300)||(21486214-21486254)
chr7 (264-300)||(23101814-23101850)
[»] chr4 (37 HSPs)
chr4 (231-528)||(42937188-42937471)
chr4 (231-342)||(29469206-29469317)
chr4 (231-318)||(8084252-8084339)
chr4 (444-528)||(8084601-8084684)
chr4 (444-528)||(29469573-29469656)
chr4 (231-318)||(23671347-23671434)
chr4 (231-300)||(50517236-50517305)
chr4 (126-176)||(32684843-32684893)
chr4 (233-300)||(37916283-37916350)
chr4 (126-176)||(3085690-3085740)
chr4 (231-297)||(41725605-41725671)
chr4 (231-296)||(29510061-29510126)
chr4 (231-300)||(29856008-29856077)
chr4 (231-300)||(49501173-49501242)
chr4 (231-300)||(49507238-49507307)
chr4 (231-285)||(51967320-51967374)
chr4 (231-300)||(26491114-26491183)
chr4 (127-176)||(29509053-29509102)
chr4 (231-296)||(46286752-46286817)
chr4 (231-300)||(49834474-49834543)
chr4 (231-285)||(6487324-6487378)
chr4 (126-176)||(7776683-7776733)
chr4 (177-215)||(8084170-8084208)
chr4 (231-285)||(9972816-9972870)
chr4 (231-283)||(871852-871905)
chr4 (231-300)||(5441894-5441963)
chr4 (127-176)||(6629216-6629265)
chr4 (127-176)||(21265467-21265516)
chr4 (244-285)||(26955392-26955433)
chr4 (231-300)||(28484388-28484457)
chr4 (231-284)||(29966401-29966454)
chr4 (127-176)||(35909890-35909939)
chr4 (127-176)||(37779955-37780004)
chr4 (231-300)||(37828070-37828139)
chr4 (231-300)||(48261570-48261639)
chr4 (244-284)||(23170738-23170778)
chr4 (120-176)||(23390081-23390137)
[»] chr3 (46 HSPs)
chr3 (231-373)||(49296159-49296301)
chr3 (231-341)||(53836005-53836115)
chr3 (231-339)||(8598702-8598811)
chr3 (444-528)||(49296524-49296607)
chr3 (444-528)||(53836368-53836451)
chr3 (231-339)||(22489434-22489542)
chr3 (231-297)||(21386476-21386542)
chr3 (231-300)||(33693299-33693368)
chr3 (231-300)||(49458401-49458470)
chr3 (231-296)||(4962724-4962789)
chr3 (127-176)||(36584953-36585002)
chr3 (260-300)||(16155236-16155276)
chr3 (120-176)||(48902442-48902498)
chr3 (125-176)||(32968964-32969015)
chr3 (231-300)||(26107819-26107888)
chr3 (127-176)||(42043994-42044043)
chr3 (231-300)||(48379640-48379709)
chr3 (120-176)||(48903996-48904052)
chr3 (175-215)||(49296075-49296115)
chr3 (125-176)||(24813832-24813883)
chr3 (125-176)||(45404622-45404673)
chr3 (129-176)||(52693442-52693489)
chr3 (177-215)||(8598620-8598658)
chr3 (231-285)||(47467415-47467469)
chr3 (231-300)||(20833387-20833456)
chr3 (127-176)||(34811561-34811610)
chr3 (240-297)||(42736359-42736416)
chr3 (231-300)||(50902950-50903019)
chr3 (231-300)||(54629341-54629410)
chr3 (175-218)||(22489574-22489617)
chr3 (125-176)||(30820148-30820199)
chr3 (266-300)||(7437560-7437594)
chr3 (231-285)||(9818568-9818622)
chr3 (231-297)||(39038580-39038646)
chr3 (231-285)||(49293846-49293900)
chr3 (177-215)||(53835923-53835961)
chr3 (123-176)||(8379925-8379978)
chr3 (127-176)||(12918578-12918627)
chr3 (231-300)||(37455337-37455406)
chr3 (231-283)||(45602422-45602475)
chr3 (231-300)||(52810848-52810917)
chr3 (124-176)||(27646043-27646095)
chr3 (264-300)||(34483739-34483775)
chr3 (264-300)||(40897654-40897690)
chr3 (124-176)||(47008239-47008291)
chr3 (231-295)||(51737333-51737397)
[»] chr5 (27 HSPs)
chr5 (231-373)||(28623083-28623225)
chr5 (231-342)||(37798067-37798178)
chr5 (231-339)||(7125114-7125223)
chr5 (444-528)||(28622776-28622859)
chr5 (418-528)||(37797726-37797835)
chr5 (231-318)||(5651158-5651245)
chr5 (445-497)||(5650411-5650463)
chr5 (231-285)||(2675078-2675132)
chr5 (126-176)||(31657932-31657982)
chr5 (126-176)||(35784659-35784709)
chr5 (127-176)||(1303317-1303366)
chr5 (127-176)||(13236187-13236236)
chr5 (231-300)||(37014346-37014415)
chr5 (177-215)||(7125267-7125305)
chr5 (231-285)||(21238763-21238817)
chr5 (127-176)||(7001550-7001599)
chr5 (137-176)||(16284940-16284979)
chr5 (125-176)||(23259876-23259927)
chr5 (231-297)||(1460790-1460856)
chr5 (126-176)||(21069885-21069935)
chr5 (231-285)||(33892846-33892900)
chr5 (126-176)||(41686854-41686904)
chr5 (231-300)||(4240107-4240176)
chr5 (231-300)||(13999735-13999804)
chr5 (177-214)||(28623270-28623307)
chr5 (231-300)||(39852862-39852931)
chr5 (264-300)||(1151932-1151968)
[»] chr1 (52 HSPs)
chr1 (231-373)||(8147381-8147523)
chr1 (231-342)||(26757679-26757790)
chr1 (231-342)||(41353485-41353596)
chr1 (231-342)||(1243252-1243363)
chr1 (231-342)||(4005131-4005243)
chr1 (238-342)||(11579046-11579150)
chr1 (231-342)||(9192088-9192200)
chr1 (232-339)||(51106957-51107065)
chr1 (444-528)||(1242889-1242972)
chr1 (444-528)||(8147772-8147855)
chr1 (444-528)||(41353851-41353934)
chr1 (444-528)||(11578708-11578791)
chr1 (418-528)||(26758020-26758129)
chr1 (231-300)||(47371563-47371632)
chr1 (231-300)||(45273058-45273127)
chr1 (120-168)||(23893430-23893478)
chr1 (127-176)||(4279868-4279917)
chr1 (233-318)||(5209338-5209423)
chr1 (127-176)||(27479846-27479895)
chr1 (231-300)||(49453048-49453117)
chr1 (231-295)||(3583549-3583613)
chr1 (176-215)||(26757596-26757635)
chr1 (177-215)||(1243407-1243445)
chr1 (177-215)||(4005049-4005087)
chr1 (177-215)||(9192006-9192044)
chr1 (231-297)||(35177201-35177267)
chr1 (177-215)||(41353403-41353441)
chr1 (138-176)||(49549249-49549287)
chr1 (177-215)||(51106874-51106912)
chr1 (177-218)||(11579189-11579230)
chr1 (127-176)||(17483980-17484029)
chr1 (231-300)||(38535784-38535853)
chr1 (231-300)||(38558002-38558071)
chr1 (231-300)||(42304488-42304557)
chr1 (127-176)||(52429135-52429184)
chr1 (175-215)||(8147297-8147337)
chr1 (264-300)||(25830887-25830923)
chr1 (264-300)||(32760087-32760123)
chr1 (264-300)||(48177080-48177116)
chr1 (260-300)||(48966479-48966519)
chr1 (230-280)||(49236974-49237024)
chr1 (231-300)||(5494736-5494805)
chr1 (231-300)||(6313067-6313136)
chr1 (231-300)||(15834672-15834741)
chr1 (231-296)||(25253557-25253622)
chr1 (231-300)||(25612583-25612652)
chr1 (247-296)||(28403938-28403987)
chr1 (231-300)||(29396072-29396141)
chr1 (231-300)||(46328477-46328546)
chr1 (231-300)||(51702086-51702155)
chr1 (264-300)||(29219645-29219681)
chr1 (127-175)||(30996993-30997040)
[»] chr8 (26 HSPs)
chr8 (231-342)||(19484258-19484369)
chr8 (444-528)||(19484623-19484706)
chr8 (231-300)||(8029829-8029898)
chr8 (125-176)||(36941516-36941567)
chr8 (233-300)||(12522422-12522489)
chr8 (231-285)||(28317075-28317129)
chr8 (127-176)||(23425057-23425106)
chr8 (231-300)||(31625800-31625869)
chr8 (240-300)||(43166316-43166376)
chr8 (231-297)||(10294982-10295048)
chr8 (177-215)||(19484176-19484214)
chr8 (231-300)||(14781772-14781841)
chr8 (127-176)||(26626040-26626089)
chr8 (231-300)||(26856597-26856666)
chr8 (240-296)||(26620338-26620394)
chr8 (445-496)||(27878220-27878271)
chr8 (229-300)||(27915567-27915638)
chr8 (229-300)||(27961986-27962057)
chr8 (445-496)||(28018401-28018452)
chr8 (130-176)||(23894651-23894697)
chr8 (126-176)||(43292737-43292787)
chr8 (127-176)||(5110129-5110178)
chr8 (231-283)||(17234757-17234810)
chr8 (231-300)||(44725431-44725500)
chr8 (264-300)||(37857409-37857445)
chr8 (260-296)||(42423262-42423298)
[»] chr2 (34 HSPs)
chr2 (231-373)||(18899844-18899986)
chr2 (444-526)||(18899513-18899594)
chr2 (231-291)||(15224273-15224333)
chr2 (126-176)||(30858186-30858236)
chr2 (231-300)||(18727636-18727705)
chr2 (231-296)||(40829679-40829744)
chr2 (127-176)||(41494362-41494411)
chr2 (260-300)||(38295707-38295747)
chr2 (231-285)||(3991816-3991870)
chr2 (231-285)||(13898519-13898573)
chr2 (231-285)||(14039136-14039190)
chr2 (177-215)||(18900030-18900068)
chr2 (231-297)||(35404311-35404377)
chr2 (231-300)||(7027395-7027464)
chr2 (231-300)||(18177763-18177832)
chr2 (127-176)||(31633587-31633636)
chr2 (127-176)||(36750624-36750673)
chr2 (127-176)||(41422760-41422809)
chr2 (211-284)||(43318766-43318838)
chr2 (266-300)||(3464129-3464163)
chr2 (231-285)||(11153354-11153408)
chr2 (126-176)||(21838864-21838914)
chr2 (444-526)||(32294294-32294376)
chr2 (231-285)||(38413458-38413512)
chr2 (231-300)||(2308703-2308772)
chr2 (127-176)||(9701318-9701367)
chr2 (231-300)||(13833060-13833129)
chr2 (231-300)||(28739935-28740004)
chr2 (231-300)||(31847207-31847276)
chr2 (445-526)||(38295303-38295383)
chr2 (231-300)||(43825332-43825401)
chr2 (124-176)||(6028590-6028642)
chr2 (264-300)||(28845110-28845146)
chr2 (120-160)||(40544590-40544630)
[»] chr6 (26 HSPs)
chr6 (231-342)||(1463616-1463728)
chr6 (231-342)||(6788143-6788255)
chr6 (231-342)||(10113726-10113837)
chr6 (231-318)||(3000283-3000370)
chr6 (231-297)||(31975643-31975709)
chr6 (231-296)||(2606938-2607003)
chr6 (175-215)||(6788059-6788099)
chr6 (232-280)||(31535068-31535116)
chr6 (176-215)||(1452080-1452119)
chr6 (176-215)||(1463772-1463811)
chr6 (177-215)||(10113881-10113919)
chr6 (231-285)||(31996251-31996305)
chr6 (127-176)||(9038888-9038937)
chr6 (231-300)||(16438749-16438818)
chr6 (231-284)||(21199597-21199650)
chr6 (445-496)||(16439141-16439192)
chr6 (142-176)||(22710519-22710553)
chr6 (127-176)||(2364409-2364458)
chr6 (127-176)||(13321068-13321117)
chr6 (127-176)||(22998785-22998834)
chr6 (127-176)||(23789570-23789619)
chr6 (260-300)||(24194485-24194526)
chr6 (127-176)||(28980595-28980644)
chr6 (231-300)||(31896128-31896197)
chr6 (231-300)||(34773876-34773945)
chr6 (264-300)||(30384705-30384741)
[»] scaffold0263 (2 HSPs)
scaffold0263 (268-342)||(414-489)
scaffold0263 (177-215)||(501-539)
[»] scaffold1128 (1 HSPs)
scaffold1128 (231-300)||(893-962)
[»] scaffold0421 (1 HSPs)
scaffold0421 (231-285)||(1742-1796)
[»] scaffold0383 (1 HSPs)
scaffold0383 (231-297)||(16673-16739)
[»] scaffold0152 (2 HSPs)
scaffold0152 (231-297)||(20909-20975)
scaffold0152 (231-297)||(28826-28892)
[»] scaffold0013 (1 HSPs)
scaffold0013 (231-287)||(89323-89379)
[»] scaffold0110 (1 HSPs)
scaffold0110 (233-300)||(39276-39343)
[»] scaffold0049 (1 HSPs)
scaffold0049 (125-176)||(89-140)
[»] scaffold0294 (1 HSPs)
scaffold0294 (126-176)||(11401-11451)
[»] scaffold0543 (1 HSPs)
scaffold0543 (231-300)||(11016-11085)
[»] scaffold0236 (1 HSPs)
scaffold0236 (127-176)||(17712-17761)
[»] scaffold0009 (1 HSPs)
scaffold0009 (127-176)||(246703-246752)


Alignment Details
Target: chr7 (Bit Score: 294; Significance: 1e-165; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 528
Target Start/End: Complemental strand, 37916203 - 37915665
Alignment:
Q  1 ttgttagatgtctgagtctcctcctaatgtatttcctttcttctcacttatnnnnnnn-tctatagtgagctaggttactctcgtgcgatgtagagttgt 99  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||    
T  37916203 ttgttagatgtctgagtctcctcttaatgtatttcctttcttctcacttataaaaaaaatctatagtgagctaggttactctcgtgcgatgtagagttgt 37916104  T
Q  100 gttgtaggaaaaatgatcagaaaattatactacctctgtccctaaatataggagttttttgtcaaaattgcggagatcaatgttccacaaatcgcgcgtc 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37916103 gttgtaggaaaaatgatcagaaaattatactacctctgtccctaaatataggagttttttgtcaaaattgcggagatcaatgttccacaaatcgcgtgtc 37916004  T
Q  200 aactcggcgagtttac--------gtgctaaaagcgttt-----------taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagtt 280  Q
    ||||||||||||||||        |||||||||||||||           |||||||||||| ||||||||||||||         ||||||||||||||    
T  37916003 aactcggcgagtttacgtgtttaggtgctaaaagcgttttaactcagaggtaaactcgatttatggtaaaatcgaac---------agtttgaccgagtt 37915913  T
Q  281 aacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgagtttactcctgta-nnnnnnnnncttcaaaaatggcccattgtttaaggcc 379  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  37915912 aacactcagtaaactcgtgtgaaattgggcgagtttaccgtttttgtgagtttactcctgtattttttttttcttcaaaaatggcccattgtttttggcc 37915813  T
Q  380 cnnnnnnnnnncttcaagaatttgatgtagatggagatgaagaaattacctaatttgnnnnnnnggatagttttattctcaagtttagaaacttgtgaaa 479  Q
    |          |||||||||||||||| ||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||||||||    
T  37915812 catttttttttcttcaagaatttgatgcagatggagatgaataaattacctaatttg-ttttttggatagttttattctcaagtttagaaacttgtgaaa 37915714  T
Q  480 ctttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37915713 ctttctttttgggatgggccagactttaaagacttatgaaatctatgct 37915665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 231 - 373
Target Start/End: Original strand, 14741469 - 14741611
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  14741469 taaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 14741568  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgttt 373  Q
    |||||||| |||         ||||||||||||||||||||||    
T  14741569 tttactccagtatttttttttcttcaaaaatggcccattgttt 14741611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 231 - 373
Target Start/End: Complemental strand, 4639931 - 4639789
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    ||||||| |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||  |||    
T  4639931 taaactctatttctggtaaaatcggaaattttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttaccgtttttacgag 4639832  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgttt 373  Q
    ||||||||||||         ||||||||||||||||||||||    
T  4639831 tttactcctgtattttttttccttcaaaaatggcccattgttt 4639789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 526
Target Start/End: Original strand, 14741861 - 14741942
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatg 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  14741861 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatggg-tagactttagagacttatgaaacctatg 14741942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 444 - 528
Target Start/End: Complemental strand, 4639565 - 4639482
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  4639565 ggatagttttattctcaagtttataaacttgtgaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 4639482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 23017035 - 23017101
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||||||||| ||||||| | |  ||||||||||||||||||||||||||||| |||||||||    
T  23017035 taaactcgatttctcgtaaaattggaagatttgacgagtttgaccgagttaacactcggtaaactcg 23017101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 21067870 - 21067939
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  21067870 taaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 21067939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 37328397 - 37328466
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||| |   ||| ||| ||||||| |||||||||||| ||||||||||||    
T  37328397 taaactcgatttctggtaaaatcggaaggtttaacgtgtttgactgagttaacactcggtaaactcgtgt 37328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 47067200 - 47067269
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||||||||||||||||| |||   ||| ||||||||||| |||||||||||| ||||||||||||    
T  47067200 taaaatcgatttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 47067269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 44256470 - 44256406
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaact 295  Q
    |||||||||||||||||||||||| |   ||| ||||||||||| |||||||||||| |||||||    
T  44256470 taaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaact 44256406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 4640013 - 4639975
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4640013 caatgttccacaaatcgcgtgtcaactcggcgagtttac 4639975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 8675821 - 8675891
Alignment:
Q  231 taaactcgatttctggtaaaa-tcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| |||||||||||| |||||   ||||||||||||||| ||||||||||||  |||||||||||    
T  8675821 taaactcggtttctggtaaaaatcgaaaggtttgacgagtttgactgagttaacactcgataaactcgtgt 8675891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 14741387 - 14741425
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  14741387 caatgttccacaaatcgcgtgtcaactcggcgagtttac 14741425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 7993647 - 7993716
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||| ||||    
T  7993647 taaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactggtgt 7993716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 19845407 - 19845456
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| |||||||    
T  19845407 tactacctccgtccctaaatataggagtcttttgccaaaattacggagat 19845456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 29614510 - 29614441
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| |||   ||| ||||||||||| |||||||||||| ||||||||||||    
T  29614510 taaaatcggtttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 29614441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 29893462 - 29893531
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||  |||||||| ||||||||   ||| ||||||||||| |||||||||||| ||||||||||||    
T  29893462 taaactcagtttctggtgaaatcgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 29893531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 35888607 - 35888558
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||| |||| |||||| ||||||||||||||    
T  35888607 tactacctccgtccctaaatataagagtcttttgttaaaattgcggagat 35888558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 300
Target Start/End: Original strand, 39028605 - 39028646
Alignment:
Q  259 atttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||||||||||| |||||||||||||||||||||||||    
T  39028605 atttaacgagtttgactgagttaacactcagtaaactcgtgt 39028646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 40299092 - 40299133
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaatt 168  Q
    ||||||||| |||||||||||||||||| |||||||||||||    
T  40299092 tactacctccgtccctaaatataggagtcttttgtcaaaatt 40299133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 42610660 - 42610729
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| | ||||||||||||||  |   |||||||||||||||||||||||||||  ||||||||||||    
T  42610660 taaacttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactgggtaaactcgtgt 42610729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 47648918 - 47648967
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||| |||||||||||| |||||| |||||||||||||||    
T  47648918 tactacctccgtccataaatataggagctttttgccaaaattgcggagat 47648967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 49044860 - 49044909
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||||||    
T  49044860 tactacctccgtccctaaatataggagccttttgccaaaattgcggagat 49044909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 8781949 - 8782001
Alignment:
Q  124 ttatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||| ||||||||||||| |||  ||||| |||||||||||||||    
T  8781949 ttatactacctccgtccctaaatatatgagccttttgccaaaattgcggagat 8782001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 319
Target Start/End: Original strand, 21024109 - 21024197
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc 319  Q
    |||||||| ||| |||| |||||| | | ||||||||||||||||||||||||||    ||||||||||| || |||  ||||||||||    
T  21024109 taaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacacgtgttaaactcgtgtaaacttgtccgagtttacc 21024197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 496
Target Start/End: Original strand, 23017424 - 23017475
Alignment:
Q  445 gatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 496  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||| ||||||    
T  23017424 gatagttttattaacaactttagaaacttgtgaaacttgcttttttggatgg 23017475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 1254525 - 1254471
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| ||  ||||| ||||||||||||||||||||    
T  1254525 taaactcgatttttggtgaaatcggactgtttgatgagtttgaccgagttaacac 1254471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 19594253 - 19594307
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| |||| |||||| | | ||||||||||||||||||||||||||    
T  19594253 taaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 19594307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 27813798 - 27813748
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| |||||||||||||||||  |||||  ||||||||||||||    
T  27813798 atactacctccgtccctaaatataggagccttttgcaaaaattgcggagat 27813748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 176
Target Start/End: Complemental strand, 33683005 - 33682959
Alignment:
Q  130 tacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||| || ||||||||||||||  |||||||||||||||||||||    
T  33683005 tacctccgtacctaaatataggagccttttgtcaaaattgcggagat 33682959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 34656648 - 34656702
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||| ||| ||| |||| |||||||| | ||||||||||||||||||||||||||    
T  34656648 taaattcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 34656702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 510136 - 510205
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  510136 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 510205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 28342801 - 28342870
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  28342801 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 28342870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 32643544 - 32643593
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| |||||  |||||| |||||||    
T  32643544 tactacctcagtccctaaatataggagtcttttgcaaaaattacggagat 32643593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 39784597 - 39784666
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  39784597 taaaatcggtttctggtaaaattggaaggtttaacgagtttgacagagttaacactcggtaaactcgtgt 39784666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 40460429 - 40460360
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||||||| ||||||||    
T  40460429 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcagtatactcgtgt 40460360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 41827818 - 41827887
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||  ||||||||||||||  |  |||| || |||||||| |||||||||||| ||||||||||||    
T  41827818 taaactcagtttctggtaaaatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtgt 41827887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 42887820 - 42887861
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaatt 168  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  42887820 tactacctccgtccctaaatataggagcattttgtcaaaatt 42887861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 176
Target Start/End: Complemental strand, 43934878 - 43934837
Alignment:
Q  135 ctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||||||||||  |||||| ||||||||||||||    
T  43934878 ctgtccctaaatataggagccttttgtgaaaattgcggagat 43934837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 3023457 - 3023493
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  3023457 acgagtttgactgagttaacactcggtaaactcgtgt 3023493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 21486214 - 21486254
Alignment:
Q  260 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||| |||||||| ||||||||||||| ||||||||||||    
T  21486214 tttgatgagtttgatcgagttaacactcggtaaactcgtgt 21486254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 23101814 - 23101850
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  23101814 acgagtttgactgagttaacactcggtaaactcgtgt 23101850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 1e-73; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 231 - 528
Target Start/End: Complemental strand, 42937471 - 42937188
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||  |||    
T  42937471 taaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactccgtaaactcgtgtgaaattaggcgagtttaccgtttttccgag 42937372  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgtttaaggcccnnnnnnnnnncttcaagaatttgatgtagatggagatgaagaaattacct 430  Q
    ||||||||||||         |||||||||||| ||||| |||                 ||||||||||||||||||||||||||||||||||||||||    
T  42937371 tttactcctgtatttttttttcttcaaaaatggtccatttttt-------------ttttcttcaagaatttgatgtagatggagatgaagaaattacct 42937285  T
Q  431 aatttgnnnnnnnggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||    
T  42937284 aatttg-ttttttggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggctagactttagagacttatgtaacctatgct 42937188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 29469206 - 29469317
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  29469206 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 29469305  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  29469306 tttactcctgta 29469317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 8084252 - 8084339
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttac 318  Q
    |||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8084252 taaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttac 8084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 8084601 - 8084684
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||||    
T  8084601 ggatagttttattctcaagtttataaacttgtgaaactttatttttgggatggg-tagactttagagacttatgaaacctatgct 8084684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 29469573 - 29469656
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||||    
T  29469573 ggatagttttattctcaagtttataaacttgtgaaactttgtttttgggatggg-tagactttagagacttatgaaacctatgct 29469656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 23671434 - 23671347
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttac 318  Q
    ||||||||||||||||| |||||||| | |||||||||||||| | |||||| ||||||||||||||||| ||||||| | |||||||    
T  23671434 taaactcgatttctggtgaaatcgaaaagtttgacgagtttgagcaagttaagactcagtaaactcgtgtaaaattggccaagtttac 23671347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 50517236 - 50517305
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||| | |   |||||||||||||||||||||||||||| ||||||||||||    
T  50517236 taaactcgatttctggtaaaattggaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgt 50517305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 32684893 - 32684843
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  32684893 atactacctccgtccctaaatataggagtcttttgtcaaaattgcggagat 32684843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 37916283 - 37916350
Alignment:
Q  233 aactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| ||||||||||||||| |   ||| ||||||||||| |||||||||||||||||||||||||    
T  37916283 aactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgt 37916350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 3085740 - 3085690
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  3085740 atactacatctgtccctaaatataggagccttttgtcaaaattgcggagat 3085690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 41725605 - 41725671
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||||||||||||||||||| |   ||| ||||||||||| |||||||||||| |||||||||    
T  41725605 taaactcgatttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcg 41725671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 29510126 - 29510061
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    ||||||| |||||||||||||||  |   |||||||||||||||||||||||||||| ||||||||    
T  29510126 taaactcaatttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactc 29510061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 29856008 - 29856077
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  29856008 taaactcgatttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 29856077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 49501242 - 49501173
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  49501242 taaactcggtttctggtaaaatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgt 49501173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 49507307 - 49507238
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  49507307 taaactcggtttctggtaaaatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgt 49507238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 51967320 - 51967374
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| |||| |||||||| | ||||||||||||||||||||||||||    
T  51967320 taaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 51967374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 26491183 - 26491114
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||  |   ||||||||||||||||||||||||| |  ||||||||||||    
T  26491183 taaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacatttggtaaactcgtgt 26491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 29509102 - 29509053
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||| |||||||||||||||||||| ||||||| |||||||    
T  29509102 tactacctccgtctctaaatataggagttttttgccaaaattacggagat 29509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 46286752 - 46286817
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||||||||||||| ||||| ||| |   ||||||||||||||||||||||||||||  |||||||    
T  46286752 taaactcgatttctagtaaactcggaaggtttgacgagtttgaccgagttaacactcgataaactc 46286817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 49834543 - 49834474
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| |   ||| ||||||||||| ||||||| |||| ||||||||||||    
T  49834543 taaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaatactcggtaaactcgtgt 49834474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 6487378 - 6487324
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | |||||||||||||||||||| |||||    
T  6487378 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 6487324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 7776683 - 7776733
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||| ||||| |||||||||||||||||  ||||| |||||||||||||||    
T  7776683 ataccacctcagtccctaaatataggagccttttgccaaaattgcggagat 7776733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 8084170 - 8084208
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  8084170 caatgttccacaaaccgcgtgtcaactcggcgagtttac 8084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 9972816 - 9972870
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| |||| |||||| | | ||||||||||||||||||||||||||    
T  9972816 taaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 9972870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 871852 - 871905
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgac-cgagttaac 283  Q
    |||||||||||||||||||||||| |   ||||||||||||||| |||||||||    
T  871852 taaactcgatttctggtaaaatcggaatgtttgacgagtttgactcgagttaac 871905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 5441894 - 5441963
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  5441894 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 5441963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 6629216 - 6629265
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||| || |||||||  ||||||||||||||    
T  6629216 tactacctccgtccctaaatatatgatttttttgctaaaattgcggagat 6629265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 21265516 - 21265467
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||| ||||||||||||  ||||| |||||||||||||||    
T  21265516 tactacctccgtccttaaatataggagccttttgccaaaattgcggagat 21265467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 26955392 - 26955433
Alignment:
Q  244 tggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    ||||||||||||| | |||| |||||||||||||||||||||    
T  26955392 tggtaaaatcgaaaagtttgtcgagtttgaccgagttaacac 26955433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 28484388 - 28484457
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||| | |   ||| ||||||||||| ||||||||||||  |||||||||||    
T  28484388 taaactcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcgataaactcgtgt 28484457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 29966454 - 29966401
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaaca 284  Q
    |||||||| ||| |||| |||||||| | || ||||||||||||||||||||||    
T  29966454 taaactcggtttttggtgaaatcgaaaagttcgacgagtttgaccgagttaaca 29966401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 35909939 - 35909890
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||| ||| |||| ||||||| ||||||||    
T  35909939 tactacctccgtccctaaatatagaagtcttttatcaaaatcgcggagat 35909890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 37779955 - 37780004
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||  |||||  ||||||||||||||    
T  37779955 tactacctccgtccctaaatataggagccttttgctaaaattgcggagat 37780004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 37828139 - 37828070
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  37828139 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 37828070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 48261570 - 48261639
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  48261570 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 48261639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 244 - 284
Target Start/End: Complemental strand, 23170778 - 23170738
Alignment:
Q  244 tggtaaaatcgaacaatttgacgagtttgaccgagttaaca 284  Q
    |||| |||||||| | |||||||||||||||||||||||||    
T  23170778 tggtgaaatcgaaaagtttgacgagtttgaccgagttaaca 23170738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 23390081 - 23390137
Alignment:
Q  120 aaaattatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||| |||||||||| |||||||||||||||||  |||||  |||||| |||||||    
T  23390081 aaaataatactacctccgtccctaaatataggagccttttgctaaaattacggagat 23390137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 8e-47; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 231 - 373
Target Start/End: Original strand, 49296159 - 49296301
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  49296159 taaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 49296258  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgttt 373  Q
    ||||||||||||         ||||||||||||||||||||||    
T  49296259 tttactcctgtatttttttttcttcaaaaatggcccattgttt 49296301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 231 - 341
Target Start/End: Original strand, 53836005 - 53836115
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||| |||    
T  53836005 taaacttgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcaagttaaccgtttttgcgag 53836104  T
Q  331 tttactcctgt 341  Q
    |||||||||||    
T  53836105 tttactcctgt 53836115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 231 - 339
Target Start/End: Original strand, 8598702 - 8598811
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtga 329  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||    
T  8598702 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcga 8598801  T
Q  330 gtttactcct 339  Q
    ||||||||||    
T  8598802 gtttactcct 8598811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 49296524 - 49296607
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||||    
T  49296524 ggatagttttattctcaagtttataaacttgtgaaactttatttttgggatggg-tagactttagagacttatgaaacctatgct 49296607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 53836368 - 53836451
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||| ||||||||||||||||||||    
T  53836368 ggatagttttattctcaagtttataaacttgtgaaacttcctttttgggatggg-tagactttagagacttatgaaacctatgct 53836451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 22489542 - 22489434
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||| |   ||| ||||||||||||||||||||||||||||||||||| |||| | | ||||||||||| ||||||  ||    
T  22489542 taaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacactcagtaaactcgtatgaagtcgagcgagtttaccgtttttgctag 22489443  T
Q  331 tttactcct 339  Q
     ||||||||    
T  22489442 gttactcct 22489434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 21386542 - 21386476
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||| |||||| |||||||||    
T  21386542 taaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttgacactcggtaaactcg 21386476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 33693299 - 33693368
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||  |   |||||||||||||||||||||||||||| ||||||||||||    
T  33693299 taaactcgatttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgt 33693368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 49458401 - 49458470
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||| |   |||||||||||||||| | ||||||||||||||||||||||    
T  49458401 taaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactcagtaaactcgtgt 49458470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 296
Target Start/End: Complemental strand, 4962789 - 4962724
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||||||||||||  |||||||||||   |||||||||||||||||||||||||||| ||||||||    
T  4962789 taaactcgatttcaagtaaaatcgaaaggtttgacgagtttgaccgagttaacactcggtaaactc 4962724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 36585002 - 36584953
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  36585002 tactacctccgtccctaaatataggagctttttgtcaaaattgcggagat 36584953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 16155236 - 16155276
Alignment:
Q  260 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  16155236 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 16155276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 48902442 - 48902498
Alignment:
Q  120 aaaattatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||||||| |||||||||||||||||  ||||| |||||||||||||||    
T  48902442 aaaattatactacctccgtccctaaatataggagcattttgccaaaattgcggagat 48902498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 32968964 - 32969015
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  32968964 tatactacctccgtccctaaatataggagtcttttgccaaaattgcggagat 32969015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 26107819 - 26107888
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||| ||||| |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  26107819 taaactcgatttctggtacaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 26107888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 42043994 - 42044043
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||||||| |||||||||||| |||||||||    
T  42043994 tactacctccgtccctaaatataggagctttttgtcaaaaatgcggagat 42044043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 48379640 - 48379709
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||| |    || ||||||||||| |||||||||||| ||||||||||||    
T  48379640 taaactcgatttctggtaaaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcgtgt 48379709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 48903996 - 48904052
Alignment:
Q  120 aaaattatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||| |||||||||| || ||||||||||||||  |||||||||||||||||||||    
T  48903996 aaaatgatactacctccgttcctaaatataggagcattttgtcaaaattgcggagat 48904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 49296075 - 49296115
Alignment:
Q  175 atcaatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  49296075 atcaatgttccacaaatcgcgtgtcaactcggcgagtttac 49296115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 24813883 - 24813832
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||||||||||||||||| |||| ||||| ||||||||| |||||    
T  24813883 tatactacctctgtccctaaatataagagtcttttgccaaaattgcagagat 24813832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 45404673 - 45404622
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||| |||||||||||||||||  ||||| |||||||||||||||    
T  45404673 tatactacctccgtccctaaatataggagccttttgccaaaattgcggagat 45404622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 52693442 - 52693489
Alignment:
Q  129 ctacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  52693442 ctacctctgtccctaaatataagagctttttgttaaaattgcggagat 52693489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 8598620 - 8598658
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  8598620 caatgttccacaaatcgcgtgtcaactcggcgagtttac 8598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 47467469 - 47467415
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| |||| |||||||| | ||||||||||||||||||||||||||    
T  47467469 taaactcggtttttggtgaaatcgaaaattttgacgagtttgaccgagttaacac 47467415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 20833387 - 20833456
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||  ||||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  20833387 taaactcagtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 20833456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 34811610 - 34811561
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||| ||  |||||||||||||||||||||    
T  34811610 tactacctccgtccctaaatatagtagccttttgtcaaaattgcggagat 34811561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 240 - 297
Target Start/End: Original strand, 42736359 - 42736416
Alignment:
Q  240 tttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||||||||| || | |||||||||||||| |||||||||| || |||||||||    
T  42736359 tttctggtaaaatcaaaaagtttgacgagtttgatcgagttaacattcggtaaactcg 42736416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 50903019 - 50902950
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  50903019 taaactcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 50902950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 54629341 - 54629410
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||||||| ||||| ||||   ||| ||||||||||   ||||||||||||||||||||||||    
T  54629341 taaactcgatttctgataaaagcgaaaggtttaacgagtttgattcagttaacactcagtaaactcgtgt 54629410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 218
Target Start/End: Complemental strand, 22489617 - 22489574
Alignment:
Q  175 atcaatgttccacaaatcgcgcgtcaactcggcgagtttacgtg 218  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||    
T  22489617 atcaatgttccacaaatcgtgtgtcaactcgacgagtttacgtg 22489574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 30820199 - 30820148
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||| ||||||||||||| |||  ||||||||||||| |||||||    
T  30820199 tatactacctccgtccctaaatataagagccttttgtcaaaattacggagat 30820148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 300
Target Start/End: Complemental strand, 7437594 - 7437560
Alignment:
Q  266 gagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||| ||||||||||||    
T  7437594 gagtttgaccgagttaacactcggtaaactcgtgt 7437560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 9818622 - 9818568
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | |||||||||||||||||||| |||||    
T  9818622 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagtgaacac 9818568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 39038580 - 39038646
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| ||||||||||||||| |   ||| |||||||||||  ||||||||||| |||||||||    
T  39038580 taaactcggtttctggtaaaatcggaaggtttaacgagtttgactaagttaacactcggtaaactcg 39038646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 49293846 - 49293900
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | |||||||||||||||||| |||||||    
T  49293846 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgaattaacac 49293900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 53835923 - 53835961
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  53835923 caatgttccacaaatcgcgtgtcaattcggcgagtttac 53835961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 176
Target Start/End: Complemental strand, 8379978 - 8379925
Alignment:
Q  123 attatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||||| |||||||||||||| ||| |||||  |||||| |||||||    
T  8379978 attatactacctccgtccctaaatatagaagtcttttgaaaaaattacggagat 8379925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 12918578 - 12918627
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||| |||  ||||| |||||||||||||||    
T  12918578 tactacctccgtccctaaatatatgagccttttgccaaaattgcggagat 12918627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 37455337 - 37455406
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| ||||||||||||| |||||||||||    
T  37455337 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcactaaactcgtgt 37455406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 45602475 - 45602422
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgac-cgagttaac 283  Q
    ||||||| ||||||||||||||||||   ||||||||||||||| |||||||||    
T  45602475 taaactcaatttctggtaaaatcgaaatgtttgacgagtttgactcgagttaac 45602422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 52810848 - 52810917
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||  |||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||| ||||    
T  52810848 taaactcgggttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaacttgtgt 52810917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 27646043 - 27646095
Alignment:
Q  124 ttatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||| |||||||| |||||||| ||||||  |||||| |||||||    
T  27646043 ttatactacctccgtccctaattataggagctttttgcaaaaattacggagat 27646095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 34483775 - 34483739
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  34483775 acgagtttgactgagttaacactcggtaaactcgtgt 34483739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 40897654 - 40897690
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  40897654 acgagtttgactgagttaacactcggtaaactcgtgt 40897690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 47008239 - 47008291
Alignment:
Q  124 ttatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||| ||||||||||||||||   ||||| ||||||| |||||||    
T  47008239 ttatactacctccgtccctaaatataggacccttttgccaaaattacggagat 47008291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 51737397 - 51737333
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaact 295  Q
    |||||||| ||||| ||||||||| |   ||| ||||||||||| |||||||||||| |||||||    
T  51737397 taaactcggtttctagtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaact 51737333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 373
Target Start/End: Complemental strand, 28623225 - 28623083
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  28623225 taaactcgatttctggtaaaattgcaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 28623126  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgttt 373  Q
    ||||||||||||         ||||||||||||||||||||||    
T  28623125 tttactcctgtatttttttttcttcaaaaatggcccattgttt 28623083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 37798178 - 37798067
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||  ||||||||||    
T  37798178 taaactcaatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcggtaaactcgtgtgaaatcgggtgagtttactgtttttgtgag 37798079  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  37798078 tttactcctgta 37798067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 7125223 - 7125114
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtga 329  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||    
T  7125223 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcga 7125124  T
Q  330 gtttactcct 339  Q
    ||||||||||    
T  7125123 gtttactcct 7125114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 444 - 528
Target Start/End: Complemental strand, 28622859 - 28622776
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  28622859 ggatagttttattctcaagtttagaaacttgtaaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 28622776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 528
Target Start/End: Complemental strand, 37797835 - 37797726
Alignment:
Q  418 gaagaaattacctaatttgnnnnnnnggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatg 517  Q
    |||||||||||||| ||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  37797835 gaagaaattacctagtttgtttttttggatagttttattctcaagtttataaacttgtgaaactttctttttgggatggg-tagactttagagacttatg 37797737  T
Q  518 aaacctatgct 528  Q
    |||| ||||||    
T  37797736 aaacttatgct 37797726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 231 - 318
Target Start/End: Complemental strand, 5651245 - 5651158
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttac 318  Q
    ||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||    
T  5651245 taaactcgatttctggtgaaattgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 5651158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 445 - 497
Target Start/End: Complemental strand, 5650463 - 5650411
Alignment:
Q  445 gatagttttattctcaagtttagaaacttgtgaaactttctttttgggatggg 497  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5650463 gatagttttattctcaagtttagaaacttgtgaaacttgctttttgggatggg 5650411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 2675132 - 2675078
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||||||||||||    
T  2675132 taaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 2675078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 31657982 - 31657932
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  31657982 atactacctccgtccctaaatatatgagtcttttgtcaaaattgcggagat 31657932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 35784659 - 35784709
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  35784659 atactaccttcgtccctaaatataggagtcttttgtcaaaattgcggagat 35784709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 1303317 - 1303366
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  1303317 tactacctccgtccctaaatataagagttttttgtcaaaattacggagat 1303366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 13236236 - 13236187
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  13236236 tactacctccgtccctaaatacaggagtcttttgtcaaaattgcggagat 13236187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 37014346 - 37014415
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| |||   ||| |||||||||||||||||||||||| ||||||||||||    
T  37014346 taaaatcggtttctggtaaaattgaaaggtttaacgagtttgaccgagttaacactcggtaaactcgtgt 37014415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 7125305 - 7125267
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  7125305 caatgttccacaaatcgcgtgtcaactcggcgagtttac 7125267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 21238817 - 21238763
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| ||||||||||| | | ||||||||||||||||||||||||||    
T  21238817 taaactcggtttttggtaaaatcggaaagtttgacgagtttgaccgagttaacac 21238763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 7001599 - 7001550
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||| |||||| |||| |||||||||||||||||||||    
T  7001599 tactacctccgtccctgaatataagagtcttttgtcaaaattgcggagat 7001550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 16284940 - 16284979
Alignment:
Q  137 gtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  16284940 gtccctaaatataggagtcttttgtcaaaattacggagat 16284979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Original strand, 23259876 - 23259927
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||| |||||||||||||| ||| ||||| ||||||| |||||||    
T  23259876 tatactacctccgtccctaaatatagaagtcttttgccaaaattacggagat 23259927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 1460856 - 1460790
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| ||||||||||||||| |    || ||||||||||| |||||||||||| |||||||||    
T  1460856 taaactcggtttctggtaaaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcg 1460790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 21069935 - 21069885
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| || | |||||||| |||| |||||||||||||||||||||    
T  21069935 atactacctccgttcttaaatataagagtcttttgtcaaaattgcggagat 21069885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 33892900 - 33892846
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| || | |||||| | | ||||||||||||||||||||||||||    
T  33892900 taaactcgatttttgatgaaatcggaaagtttgacgagtttgaccgagttaacac 33892846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 41686854 - 41686904
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||||||||||||||||||||  ||||| | ||||| |||||||    
T  41686854 atactacctctgtccctaaatataggagccttttgcccaaattacggagat 41686904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 4240176 - 4240107
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||  ||||||||||||||| |   ||| |||||||||||  ||||||||||| ||||||||||||    
T  4240176 taaactccgtttctggtaaaatcggaaggtttaacgagtttgacaaagttaacactcggtaaactcgtgt 4240107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 13999804 - 13999735
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  13999804 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 13999735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 214
Target Start/End: Complemental strand, 28623307 - 28623270
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagttta 214  Q
    ||||||||||||||||||| |||||||| |||||||||    
T  28623307 caatgttccacaaatcgcgtgtcaactcagcgagttta 28623270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 39852862 - 39852931
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||||||| ||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  39852862 taaaatcgatttttggtaaaattggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgt 39852931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 1151968 - 1151932
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  1151968 acgagtttgactgagttaacactcggtaaactcgtgt 1151932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 5e-42; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 373
Target Start/End: Original strand, 8147381 - 8147523
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||| | | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  8147381 taaactcgatttctggtaaaattgcaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 8147480  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgttt 373  Q
    ||||||||||||         ||||||||||||||||||||||    
T  8147481 tttactcctgtatttttttttcttcaaaaatggcccattgttt 8147523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 26757679 - 26757790
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  26757679 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 26757778  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  26757779 tttactcctgta 26757790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 41353485 - 41353596
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||  |||    
T  41353485 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttacgag 41353584  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  41353585 tttactcctgta 41353596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 1243363 - 1243252
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||| | |||    
T  1243363 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcgggcgagtttaccgttttagcgag 1243264  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  1243263 tttactcctgta 1243252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 4005131 - 4005243
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtga 329  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||    
T  4005131 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcga 4005230  T
Q  330 gtttactcctgta 342  Q
    |||||||||||||    
T  4005231 gtttactcctgta 4005243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 238 - 342
Target Start/End: Complemental strand, 11579150 - 11579046
Alignment:
Q  238 gatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgagtttactc 337  Q
    ||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||||    
T  11579150 gatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagttcaccgtttttgcgagtttactc 11579051  T
Q  338 ctgta 342  Q
    |||||    
T  11579050 ctgta 11579046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 9192088 - 9192200
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtga 329  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||    
T  9192088 taaactcgatttctggtaaaatcagaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcga 9192187  T
Q  330 gtttactcctgta 342  Q
    |||||||||||||    
T  9192188 gtttactcctgta 9192200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 232 - 339
Target Start/End: Original strand, 51106957 - 51107065
Alignment:
Q  232 aaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtgag 330  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| |||    
T  51106957 aaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcgag 51107056  T
Q  331 tttactcct 339  Q
    |||||||||    
T  51107057 tttactcct 51107065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 444 - 528
Target Start/End: Complemental strand, 1242972 - 1242889
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  1242972 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 1242889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 8147772 - 8147855
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  8147772 ggatagttttattctcaagtttagaaacttgtaaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 8147855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 41353851 - 41353934
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  41353851 ggatagttttattctcaagtttataaacttgtgaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 41353934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 444 - 528
Target Start/End: Complemental strand, 11578791 - 11578708
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  11578791 ggatagttttattctcaagtttataaacttatgaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 11578708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 418 - 528
Target Start/End: Original strand, 26758020 - 26758129
Alignment:
Q  418 gaagaaattacctaatttgnnnnnnnggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatg 517  Q
    |||||||||||||| ||||       ||||||||||||||||||||||| ||| |||||||||||| |||||||||||||  |||||||| |||||||||    
T  26758020 gaagaaattacctagtttgtttttatggatagttttattctcaagtttataaatttgtgaaactttgtttttgggatggg-tagactttagagacttatg 26758118  T
Q  518 aaacctatgct 528  Q
    |||||||||||    
T  26758119 aaacctatgct 26758129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 47371632 - 47371563
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||| |   |||| ||||||||||||||||||||||| ||||||||||||    
T  47371632 taaactcgatttctggtaaaatcggaaggtttgccgagtttgaccgagttaacactcggtaaactcgtgt 47371563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 45273058 - 45273127
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| |   ||||||||||||||| |||||||||||| ||||||||||||    
T  45273058 taaactcggtttctggtaaaatcggaaggtttgacgagtttgactgagttaacactcggtaaactcgtgt 45273127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 120 - 168
Target Start/End: Original strand, 23893430 - 23893478
Alignment:
Q  120 aaaattatactacctctgtccctaaatataggagttttttgtcaaaatt 168  Q
    |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  23893430 aaaattatactatctctgtccctaaatataggagtcttttgtcaaaatt 23893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 4279868 - 4279917
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||||||||||||||||||| ||||| ||||||||| |||||    
T  4279868 tactacctctgtccctaaatataggagtcttttgccaaaattgcagagat 4279917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 233 - 318
Target Start/End: Complemental strand, 5209423 - 5209338
Alignment:
Q  233 aactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttac 318  Q
    ||||||||||||||| |||||  | | |||||||||||||| |||||||||||||| |||||| |||| ||||  | |||||||||    
T  5209423 aactcgatttctggtgaaatcagaaagtttgacgagtttgatcgagttaacactcaataaacttgtgtaaaatcagccgagtttac 5209338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 27479895 - 27479846
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||||    
T  27479895 tactacctccgtccctaaatataggagtcttttgtcaaaattacggagat 27479846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 49453117 - 49453048
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||| ||||||  |   |||||| ||||||||||||||||||||| ||||||||||||    
T  49453117 taaactcgatttctggaaaaatcataaggtttgacaagtttgaccgagttaacactcggtaaactcgtgt 49453048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 295
Target Start/End: Complemental strand, 3583613 - 3583549
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaact 295  Q
    |||||||| ||||| ||||||||| | | |||||||||||| ||||||||||||||| |||||||    
T  3583613 taaactcggtttctagtaaaatcggaaagtttgacgagtttaaccgagttaacactcggtaaact 3583549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 26757596 - 26757635
Alignment:
Q  176 tcaatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26757596 tcaatgttccacaaatcgcgtgtcaactcggcgagtttac 26757635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 1243445 - 1243407
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1243445 caatgttccacaaatcgcgtgtcaactcggcgagtttac 1243407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 4005049 - 4005087
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4005049 caatgttccacaaatcgcgtgtcaactcggcgagtttac 4005087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 9192006 - 9192044
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  9192006 caatgttccacaaatcgcgtgtcaactcggcgagtttac 9192044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 35177267 - 35177201
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    ||||||||||||||| |||||||| |    |||||||||||||||||||||||||||  ||||||||    
T  35177267 taaactcgatttctgataaaatcggaaggattgacgagtttgaccgagttaacactcgataaactcg 35177201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 41353403 - 41353441
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  41353403 caatgttccacaaatcgcgtgtcaactcggcgagtttac 41353441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Complemental strand, 49549287 - 49549249
Alignment:
Q  138 tccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  49549287 tccctaaatataggagtcttttgtcaaaattgcggagat 49549249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 51106874 - 51106912
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  51106874 caatgttccacaaatcgcgtgtcaactcggcgagtttac 51106912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 11579230 - 11579189
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttacgtg 218  Q
    ||||||||||||||||||  ||||||||||||||||||||||    
T  11579230 caatgttccacaaatcgcatgtcaactcggcgagtttacgtg 11579189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 17484029 - 17483980
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||||||    
T  17484029 tactacctccgtccctaaatataggagccttttgccaaaattgcggagat 17483980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 38535853 - 38535784
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| | ||||||||||||||| |  | || ||||||||||| |||||||||||| ||||||||||||    
T  38535853 taaactgggtttctggtaaaatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtgt 38535784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 38558071 - 38558002
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| | ||||||||||||||| |  | || ||||||||||| |||||||||||| ||||||||||||    
T  38558071 taaactgggtttctggtaaaatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtgt 38558002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 42304557 - 42304488
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||| | |   ||| |||||||||||||||||||||||  ||||||||||||    
T  42304557 taaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaactcgtgt 42304488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 52429184 - 52429135
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| ||||||||||||| ||| |||||| |||||||||||||||    
T  52429184 tactacctccgtccctaaatataagagctttttgccaaaattgcggagat 52429135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 8147297 - 8147337
Alignment:
Q  175 atcaatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||||| |||||||| ||||||||||    
T  8147297 atcaatgttccacaaatcgcgtgtcaactcagcgagtttac 8147337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 25830923 - 25830887
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||||||||||||||||    
T  25830923 acgagtttgactgagttaacactcagtaaactcgtgt 25830887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 32760123 - 32760087
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||||||||||||||||| |||||||||||    
T  32760123 acgagtttgaccgagttaacactcactaaactcgtgt 32760087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 48177116 - 48177080
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||||||||||||||||    
T  48177116 acgagtttgactgagttaacactcagtaaactcgtgt 48177080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 48966519 - 48966479
Alignment:
Q  260 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  48966519 tttgacgagtttgaccgagttaatactcggtaaactcgtgt 48966479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 280
Target Start/End: Complemental strand, 49237024 - 49236974
Alignment:
Q  230 ttaaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagtt 280  Q
    |||| |||| |||||||||||||||||   |||||||||||||||||||||    
T  49237024 ttaagctcggtttctggtaaaatcgaaaggtttgacgagtttgaccgagtt 49236974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 5494805 - 5494736
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||  |   ||||| ||||||||| ||||||||||||  |||||||||||    
T  5494805 taaactcggtttctggtaaaatcagaaggtttgatgagtttgactgagttaacactcgataaactcgtgt 5494736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 6313067 - 6313136
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  6313067 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 6313136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 15834741 - 15834672
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||||||| ||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  15834741 taaattcgatttttggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 15834672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 25253557 - 25253622
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||| ||| ||||||||||| ||| |  |||||||||||||||| ||||||||| || ||||||||    
T  25253557 taaattcggtttctggtaaactcggaagatttgacgagtttgactgagttaacattcggtaaactc 25253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 25612583 - 25612652
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  25612583 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 25612652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 296
Target Start/End: Complemental strand, 28403987 - 28403938
Alignment:
Q  247 taaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    ||||||||||   |||||||| ||||||||||||||||||| ||||||||    
T  28403987 taaaatcgaaatgtttgacgaatttgaccgagttaacactcggtaaactc 28403938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 29396141 - 29396072
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  29396141 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 29396072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 46328477 - 46328546
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| |||||| |||||||| |   ||| ||||||||||  |||||||||||| ||||||||||||    
T  46328477 taaactcggtttctgttaaaatcggaaggtttaacgagtttgattgagttaacactcggtaaactcgtgt 46328546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 51702086 - 51702155
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| |||||||||||||  ||   ||| ||||||||||| |||||||||||| ||||||||||||    
T  51702086 taaaatcggtttctggtaaaattaaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 51702155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 29219645 - 29219681
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  29219645 acgagtttgactgagttaacactcggtaaactcgtgt 29219681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 30997040 - 30996993
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggaga 175  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| ||||||    
T  30997040 tactacctc-gtccctaaatataggagtcttttgccaaaattacggaga 30996993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 19484258 - 19484369
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||  |||    
T  19484258 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttacgag 19484357  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  19484358 tttactcctgta 19484369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 19484623 - 19484706
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatgct 528  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  19484623 ggatagttttattctcaagtttataaacttgtgaaactttctttttgggatggg-tagactttagagacttatgaaacctatgct 19484706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 8029898 - 8029829
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||| |   |||||||||||||||||||||||||||| ||||| ||||||    
T  8029898 taaactcgatttctggtaaaatcggaaggtttgacgagtttgaccgagttaacactcggtaaaatcgtgt 8029829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 36941567 - 36941516
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  36941567 tatactacctccgtccctaaatataggagtcttttgtcaaaattgcggagat 36941516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 12522489 - 12522422
Alignment:
Q  233 aactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| ||||||||||||| |||   |||||||||||||||||||||||||||  ||||||||||||    
T  12522489 aactcggtttctggtaaaattgaaaggtttgacgagtttgaccgagttaacacttggtaaactcgtgt 12522422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 28317129 - 28317075
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||||| | ||||||||||||||||||||||||||    
T  28317129 taaactcgatttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 28317075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23425106 - 23425057
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||||    
T  23425106 tactacctctgtccctaaatataggagcattttgtcaaaattacggagat 23425057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 31625800 - 31625869
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  31625800 taaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 31625869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 300
Target Start/End: Complemental strand, 43166376 - 43166316
Alignment:
Q  240 tttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||||| |||   ||||||||||||||| |||||||||||| ||||||||||||    
T  43166376 tttctggtaaaattgaaaggtttgacgagtttgactgagttaacactcggtaaactcgtgt 43166316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 10295048 - 10294982
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| ||||||||||||||| |   ||| ||||||||||| |||||||||||| |||||||||    
T  10295048 taaactcggtttctggtaaaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcg 10294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 19484176 - 19484214
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  19484176 caatgttccacaaatcgcgtgtcaactcggcgagtttac 19484214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 14781841 - 14781772
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||||||||||||||||    
T  14781841 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcagtaaactcgtgt 14781772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 26626089 - 26626040
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| |||||  ||||||||||||||    
T  26626089 tactacctccgtccctaaatataggagtcttttgcaaaaattgcggagat 26626040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 26856597 - 26856666
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||  |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  26856597 taaactcggtttctggtaaaatcagaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 26856666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 296
Target Start/End: Complemental strand, 26620394 - 26620338
Alignment:
Q  240 tttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||||| |||||||||| | |||||||||||||| |||||||||||||  |||||||    
T  26620394 tttctgataaaatcgaaaagtttgacgagtttgatcgagttaacactcgataaactc 26620338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 496
Target Start/End: Complemental strand, 27878271 - 27878220
Alignment:
Q  445 gatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 496  Q
    |||||||||||| |||| ||||| |||||||||||||| |||||| ||||||    
T  27878271 gatagttttattatcaactttaggaacttgtgaaacttgcttttttggatgg 27878220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 27915638 - 27915567
Alignment:
Q  229 tttaaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| |||||||||| ||||||||     ||||||||||||||||||||||||||||  | |||||||||    
T  27915638 tttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatgaactcgtgt 27915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 27962057 - 27961986
Alignment:
Q  229 tttaaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| |||||||||| ||||||||     ||||||||||||||||||||||||||||  | |||||||||    
T  27962057 tttaaattcgatttctgataaaatcggtaggtttgacgagtttgaccgagttaacactcgatgaactcgtgt 27961986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 496
Target Start/End: Complemental strand, 28018452 - 28018401
Alignment:
Q  445 gatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 496  Q
    |||||||||||| |||| ||||| |||||||||||||| |||||| ||||||    
T  28018452 gatagttttattatcaactttaggaacttgtgaaacttgcttttttggatgg 28018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 23894651 - 23894697
Alignment:
Q  130 tacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||| |||||||||||||||| |||||||| |||||| |||||||    
T  23894651 tacctccgtccctaaatataggaattttttgttaaaattacggagat 23894697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 43292737 - 43292787
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| |||||||||||||||||  ||||| ||||||| |||||||    
T  43292737 atactacctccgtccctaaatataggagccttttgccaaaattacggagat 43292787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 5110178 - 5110129
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||  ||||||||||||||||||||||  ||||||| |||||||    
T  5110178 tactacctccatccctaaatataggagttttttaccaaaattacggagat 5110129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 283
Target Start/End: Original strand, 17234757 - 17234810
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgac-cgagttaac 283  Q
    |||||||||||||||||||||||| |   ||||||||||||||| |||||||||    
T  17234757 taaactcgatttctggtaaaatcggaatgtttgacgagtttgactcgagttaac 17234810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 44725500 - 44725431
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  44725500 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 44725431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 37857409 - 37857445
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  37857409 acgagtttgactgagttaacactcggtaaactcgtgt 37857445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 296
Target Start/End: Original strand, 42423262 - 42423298
Alignment:
Q  260 tttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||||||||||||||||||||||||||  ||||||||    
T  42423262 tttgacgagtttgaccgagttaacactgggtaaactc 42423298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 1e-39; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 231 - 373
Target Start/End: Complemental strand, 18899986 - 18899844
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||    
T  18899986 taaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 18899887  T
Q  331 tttactcctgtannnnnnnnncttcaaaaatggcccattgttt 373  Q
    |||||||| |||         ||||||||||||||||||||||    
T  18899886 tttactccagtatttttttttcttcaaaaatggcccattgttt 18899844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 526
Target Start/End: Complemental strand, 18899594 - 18899513
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatg 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||    
T  18899594 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatggg-tagactttagagacttatgaaacctatg 18899513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 15224273 - 15224333
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagta 291  Q
    ||||||||||||||||| |||||||| | |||||||||||||||||| |||||||||||||    
T  15224273 taaactcgatttctggtgaaatcgaaaagtttgacgagtttgaccgaattaacactcagta 15224333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 30858236 - 30858186
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| |||||||||||||||||| ||||| |||||||||||||||    
T  30858236 atactacctccgtccctaaatataggagtcttttgccaaaattgcggagat 30858186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 18727705 - 18727636
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||| ||||||||||||| || | |||||||||||| |||||||||||| ||  |||||||||||    
T  18727705 taaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtgt 18727636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 40829679 - 40829744
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||||||| ||||||||||||| |||   |||||||| |||||||||||||||||||| |||||||    
T  40829679 taaactcggtttctggtaaaatagaaaggtttgacgaatttgaccgagttaacactcaataaactc 40829744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 41494362 - 41494411
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| |||||| ||||||||||||||    
T  41494362 tactacctccgtccctaaatataggagtcttttgttaaaattgcggagat 41494411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 300
Target Start/End: Complemental strand, 38295747 - 38295707
Alignment:
Q  260 tttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  38295747 tttgacgagtttgaccgagttaacactcggtaaactcgtgt 38295707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 3991816 - 3991870
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| |||| |||||||| | ||||||||||||||||||||||||||    
T  3991816 taaactcggtttttggtgaaatcgaaaagtttgacgagtttgaccgagttaacac 3991870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 13898519 - 13898573
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | ||||||||||||||||||||||||||    
T  13898519 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 13898573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 14039136 - 14039190
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | ||||||||||||||||||||||||||    
T  14039136 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 14039190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 18900068 - 18900030
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  18900068 caatgttccacaaatcgcgtgtcaactcggcgagtttac 18900030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 35404377 - 35404311
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| ||| ||||||||| | | | ||||||||||||||||||||||||||||  ||||||||    
T  35404377 taaactcggtttttggtaaaattggaaagtttgacgagtttgaccgagttaacactcgataaactcg 35404311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 7027395 - 7027464
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| |||   ||| ||||||||||| |||||||||||| ||||||||||||    
T  7027395 taaaatcggtttctggtaaaattgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 7027464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 18177763 - 18177832
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | | | ||| ||||||||||| |||||||||||| ||||||||||||    
T  18177763 taaaatcggtttctggtaaaattggaaagtttaacgagtttgacagagttaacactcggtaaactcgtgt 18177832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 31633587 - 31633636
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| ||||| ||||||| |||||||    
T  31633587 tactacctccgtccctaaatataggagtcttttgccaaaattacggagat 31633636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 36750624 - 36750673
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||  ||||| |||||||||||||||    
T  36750624 tactacctccgtccctaaatataggagccttttgccaaaattgcggagat 36750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 41422809 - 41422760
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||  |||||| ||||||||||||||    
T  41422809 tactacctccgtccctaaatataggagccttttgttaaaattgcggagat 41422760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 211 - 284
Target Start/End: Complemental strand, 43318838 - 43318766
Alignment:
Q  211 tttacgtgctaaaagcgttttaaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaaca 284  Q
    |||| ||||||||| ||| |||| ||| |||| ||||||||||| | | |||||||||||||||||||||||||    
T  43318838 tttatgtgctaaaaacgtgttaa-ctctatttttggtaaaatcggaaagtttgacgagtttgaccgagttaaca 43318766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 266 - 300
Target Start/End: Original strand, 3464129 - 3464163
Alignment:
Q  266 gagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||| |||||||||||||||||||||||||    
T  3464129 gagtttgactgagttaacactcagtaaactcgtgt 3464163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 11153408 - 11153354
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||||||||||||||||    |||| |||||||||||||||||||||    
T  11153408 taaactcggtttctggtaaaatcgagatgtttggcgagtttgaccgagttaacac 11153354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Complemental strand, 21838914 - 21838864
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||| || ||| |||||||||| ||| |||||||||||||||||||||    
T  21838914 atactacatccgtctctaaatatagaagtcttttgtcaaaattgcggagat 21838864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 526
Target Start/End: Original strand, 32294294 - 32294376
Alignment:
Q  444 ggatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatg 526  Q
    |||||||||||||  ||| ||||| |||||||||||||| |||||| ||||||   |||||| | || |||||||||| ||||    
T  32294294 ggatagttttattaacaactttaggaacttgtgaaacttgcttttttggatggttaagacttaagagtcttatgaaacttatg 32294376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 38413512 - 38413458
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||| ||| |||| |||||| | | ||||||||||||||||||||||||||    
T  38413512 taaactcggtttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 38413458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 2308772 - 2308703
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||| |||||||||| || | |||||| ||||||||| ||||||||||| ||||| ||||||    
T  2308772 taaattcggtttgtggtaaaatcaaaaagtttgacaagtttgaccaagttaacactcggtaaaatcgtgt 2308703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 9701367 - 9701318
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| || |||||||||| |||  |||||||||||||||||||||    
T  9701367 tactacctccgttcctaaatataagagccttttgtcaaaattgcggagat 9701318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 13833129 - 13833060
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||| |||||| ||||||||  |  |||| || |||||||| |||||||||||| ||||||||||||    
T  13833129 taaactcaatttctagtaaaatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtgt 13833060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 28740004 - 28739935
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  28740004 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 28739935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 31847276 - 31847207
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||| ||||||| |||||||  |   ||||||||||| |||||| ||||||||| ||||||||||||    
T  31847276 taaactctatttctgataaaatcagaaggtttgacgagttcgaccgaattaacactcggtaaactcgtgt 31847207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 526
Target Start/End: Complemental strand, 38295383 - 38295303
Alignment:
Q  445 gatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgggccagactttaaagacttatgaaacctatg 526  Q
    ||||||||||||  ||| ||||| || |||||||||||||||||| ||||||   | || ||||||||||||||||| ||||    
T  38295383 gatagttttattagcaactttaggaatttgtgaaactttcttttttggatggcttaaac-ttaaagacttatgaaacttatg 38295303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 43825332 - 43825401
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  43825332 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 43825401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 6028642 - 6028590
Alignment:
Q  124 ttatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||||| ||||||||||||| |||| |||||  |||||| |||||||    
T  6028642 ttatactacctccgtccctaaatataagagtcttttgcaaaaattacggagat 6028590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 28845110 - 28845146
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  28845110 acgagtttgactgagttaacactcggtaaactcgtgt 28845146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 40544630 - 40544590
Alignment:
Q  120 aaaattatactacctctgtccctaaatataggagttttttg 160  Q
    |||||||||||||||| |||||||| ||||||||| |||||    
T  40544630 aaaattatactacctccgtccctaattataggagtcttttg 40544590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 2e-35; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 1463728 - 1463616
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtga 329  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||    
T  1463728 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcga 1463629  T
Q  330 gtttactcctgta 342  Q
    |||||||||||||    
T  1463628 gtttactcctgta 1463616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 231 - 342
Target Start/End: Original strand, 6788143 - 6788255
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtga 329  Q
    |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||    
T  6788143 taaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcgggcgagtttaccgttttttgcga 6788242  T
Q  330 gtttactcctgta 342  Q
    |||||||||||||    
T  6788243 gtttactcctgta 6788255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 231 - 342
Target Start/End: Complemental strand, 10113837 - 10113726
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttaccatttttgtgag 330  Q
    |||||||| ||| ||||||||||| | | ||||||||||||||||||||| | |||||||||||||||||||||| ||||||||||||| |||||| |||    
T  10113837 taaactcgttttttggtaaaatcggaaagtttgacgagtttgaccgagtttagactcagtaaactcgtgtgaaatcgggcgagtttaccgtttttgcgag 10113738  T
Q  331 tttactcctgta 342  Q
    ||||||||||||    
T  10113737 tttactcctgta 10113726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 318
Target Start/End: Original strand, 3000283 - 3000370
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttac 318  Q
    |||| ||||||| |||||||||||   | |||||||||||||| |||||||||||||| ||||||||||| |||| ||  ||||||||    
T  3000283 taaattcgatttatggtaaaatcgggaagtttgacgagtttgatcgagttaacactcaataaactcgtgtaaaatcggctgagtttac 3000370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 31975709 - 31975643
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||||||||| ||||||||| |   ||||||||||||||||||||||| |||| |||||||||    
T  31975709 taaactcgatttcttgtaaaatcggaaggtttgacgagtttgaccgagttaagactcggtaaactcg 31975643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 2606938 - 2607003
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactc 296  Q
    |||||||||||||||||||||||  |   ||||| ||||||||||||||||||||||| |||||||    
T  2606938 taaactcgatttctggtaaaatcagaaggtttgatgagtttgaccgagttaacactcaataaactc 2607003  T

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Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 215
Target Start/End: Original strand, 6788059 - 6788099
Alignment:
Q  175 atcaatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  6788059 atcaatgttccacaaatcgcgtgtcaactcggcgagtttac 6788099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 232 - 280
Target Start/End: Complemental strand, 31535116 - 31535068
Alignment:
Q  232 aaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagtt 280  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||    
T  31535116 aaactcgatttctggtaaaatcgaaaggtttgacgagtttgaccgagtt 31535068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 1452119 - 1452080
Alignment:
Q  176 tcaatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1452119 tcaatgttccacaaatcgcgtgtcaactcggcgagtttac 1452080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 215
Target Start/End: Complemental strand, 1463811 - 1463772
Alignment:
Q  176 tcaatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1463811 tcaatgttccacaaatcgcgtgtcaactcggcgagtttac 1463772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 10113919 - 10113881
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  10113919 caatgttccacaaatcgcgtgtcaactcggcgagtttac 10113881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Complemental strand, 31996305 - 31996251
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | ||||||||||||||||||||||||||    
T  31996305 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 31996251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 9038937 - 9038888
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||| |||| |||||||||||||||||| ||||| |||||||||||||||    
T  9038937 tactccctccgtccctaaatataggagtcttttgccaaaattgcggagat 9038888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 16438749 - 16438818
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||| |||||||||||||| |   |||||||||||| | ||||||| ||||| ||||||||||||    
T  16438749 taaactcgacttctggtaaaatcggaaggtttgacgagtttaatcgagttagcactcggtaaactcgtgt 16438818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 21199597 - 21199650
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaaca 284  Q
    |||||||||||| |||| |||||| | | |||||||||||||||||||||||||    
T  21199597 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaaca 21199650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 445 - 496
Target Start/End: Original strand, 16439141 - 16439192
Alignment:
Q  445 gatagttttattctcaagtttagaaacttgtgaaactttctttttgggatgg 496  Q
    ||||||||||||  ||| |||||||||||||||||||| |||||| ||||||    
T  16439141 gatagttttattaacaactttagaaacttgtgaaacttgcttttttggatgg 16439192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 176
Target Start/End: Complemental strand, 22710553 - 22710519
Alignment:
Q  142 taaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||||| |||||||||||||||||||||    
T  22710553 taaatataggagtcttttgtcaaaattgcggagat 22710519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 2364409 - 2364458
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||||||||||||||||| |||||  |||||||| |||||    
T  2364409 tactacctccgtccctaaatataggagtcttttgcaaaaattgcagagat 2364458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 13321068 - 13321117
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||| | |||||||||||||||||  ||||| |||||||||||||||    
T  13321068 tactaccgccgtccctaaatataggagccttttgccaaaattgcggagat 13321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 22998785 - 22998834
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||  |||||||||||| |||  |||||||||||||||||||||    
T  22998785 tactacctccctccctaaatataagagccttttgtcaaaattgcggagat 22998834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 23789619 - 23789570
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||  |||||||||||| |||  |||||||||||||||||||||    
T  23789619 tactacctccctccctaaatataagagccttttgtcaaaattgcggagat 23789570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 24194485 - 24194526
Alignment:
Q  260 tttgacgagt-ttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||||| |||||||||||||||||| ||||||||||||    
T  24194485 tttgacgagtattgaccgagttaacactcggtaaactcgtgt 24194526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 28980595 - 28980644
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||  |||||||||||| ||| |||||| |||||||||||||||    
T  28980595 tactacctccatccctaaatataagagctttttgccaaaattgcggagat 28980644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 31896128 - 31896197
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  31896128 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 31896197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 34773876 - 34773945
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||| ||||||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  34773876 taaaatcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 34773945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 30384741 - 30384705
Alignment:
Q  264 acgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  30384741 acgagtttgactgagttaacactcggtaaactcgtgt 30384705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 268 - 342
Target Start/End: Complemental strand, 489 - 414
Alignment:
Q  268 gtttgaccgagttaacactcagtaaactcgtgtgaaattgggcgagtttacc-atttttgtgagtttactcctgta 342  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||||||||||  |||||| |||||||||||||||    
T  489 gtttgaccgagttaacactcactaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagtttactcctgta 414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 177 - 215
Target Start/End: Complemental strand, 539 - 501
Alignment:
Q  177 caatgttccacaaatcgcgcgtcaactcggcgagtttac 215  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  539 caatgttccacaaatcgcgtgtcaactcggcgagtttac 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 231 - 300
Target Start/End: Complemental strand, 962 - 893
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||||| ||||||||||||||| | | ||||| ||||||||||||||||||||| |||||||||||||    
T  962 taaactcggtttctggtaaaatcggaaagtttgatgagtttgaccgagttaacacttagtaaactcgtgt 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 285
Target Start/End: Original strand, 1742 - 1796
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacac 285  Q
    |||||||||||| |||| |||||| | | ||||||||||||||||||||||||||    
T  1742 taaactcgatttttggtgaaatcggaaagtttgacgagtttgaccgagttaacac 1796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 16739 - 16673
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| |||||||||||||||||   ||| ||||||||||| |||||||||||  |||||||||    
T  16739 taaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcg 16673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 20975 - 20909
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| |||||||||||||||||   ||| ||||||||||| |||||||||||  |||||||||    
T  20975 taaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcg 20909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 28826 - 28892
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcg 297  Q
    |||||||| |||||||||||||||||   ||| ||||||||||| |||||||||||  |||||||||    
T  28826 taaactcggtttctggtaaaatcgaaaggtttaacgagtttgactgagttaacacttggtaaactcg 28892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 89323 - 89379
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactc 287  Q
    |||||||||||||||||||||| | |   |||||||||||||| |||||||||||||    
T  89323 taaactcgatttctggtaaaattggaaggtttgacgagtttgatcgagttaacactc 89379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 39343 - 39276
Alignment:
Q  233 aactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||||| |||||||||||||||||   ||||||||||||||| |||||| ||||   |||||||||||    
T  39343 aactcggtttctggtaaaatcgaaaggtttgacgagtttgactgagttagcacttgataaactcgtgt 39276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 176
Target Start/End: Complemental strand, 140 - 89
Alignment:
Q  125 tatactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||||| |||| ||||||||||||  ||||| |||||||||||||||    
T  140 tatactacctccgtccttaaatataggagccttttgccaaaattgcggagat 89  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 11401 - 11451
Alignment:
Q  126 atactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||||||||| ||| |||||||||||||  ||||||||||||| |||||||    
T  11401 atactacctccgtctctaaatataggagcattttgtcaaaattacggagat 11451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 11016 - 11085
Alignment:
Q  231 taaactcgatttctggtaaaatcgaacaatttgacgagtttgaccgagttaacactcagtaaactcgtgt 300  Q
    |||| ||||||| ||||||||| | |   ||| ||||||||||| |||||||||||| ||||||||||||    
T  11016 taaattcgatttttggtaaaattggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgt 11085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 17761 - 17712
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    ||||||||| |||| ||||||||||||  ||||| |||||||||||||||    
T  17761 tactacctccgtccttaaatataggagcattttgccaaaattgcggagat 17712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 246752 - 246703
Alignment:
Q  127 tactacctctgtccctaaatataggagttttttgtcaaaattgcggagat 176  Q
    |||| |||| |||||||||||||||||  ||||| |||||||||||||||    
T  246752 tacttcctccgtccctaaatataggagccttttgccaaaattgcggagat 246703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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