View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19681_low_3 (Length: 390)
Name: NF19681_low_3
Description: NF19681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19681_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 361; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 1 - 377
Target Start/End: Original strand, 33791163 - 33791539
Alignment:
| Q |
1 |
agtatcaactgttaatgatgtacatcttccagggccagaatcctcaatttctcaaacattacaagcttttaaatccaaaggtatgacattggaagaaatg |
100 |
Q |
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| T |
33791163 |
agtatcaactgttaatgatgtacatcttccagggccagaatcctcaatttctcaaacattacaagcttttaaatccaaaggtatgacattggaagaaatg |
33791262 |
T |
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| Q |
101 |
gttacacttttaggagcacacactgttggatttgctcattgtagtttcattggaaaaagacttggtagtaatgatagttcaatggaccctaatttaagga |
200 |
Q |
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| T |
33791263 |
gttacacttttaggagcacacactgttggatttgctcattgtagtttcattggaaaaagacttggtagtaatgatagttcaatggaccctaatttaagaa |
33791362 |
T |
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| Q |
201 |
aaacgttggttcaatggtgtggtgttgaaggtaaggatccattggtgtttttggatcaaaacacttcttttgtgtttgatcatcaattttataatcagat |
300 |
Q |
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| T |
33791363 |
aaaggttggttcaatggtgtggtgttgaaggtaaggatccattagtgtttttggatcaaaacacttcttttgtttttgatcatcaattttataatcagat |
33791462 |
T |
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| Q |
301 |
tttgttggggagaggtgtgttaacaattgaccagaatttggctctagattccatttccaaaggggttgtcacaggtt |
377 |
Q |
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| T |
33791463 |
tttgttggggagaggtgtgttaacaattgaccagaatttggctctagattccatttccaaaggggttgtcacaggtt |
33791539 |
T |
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