View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19681_low_4 (Length: 318)

Name: NF19681_low_4
Description: NF19681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19681_low_4
NF19681_low_4
[»] chr5 (26 HSPs)
chr5 (19-311)||(14507960-14508253)
chr5 (43-92)||(372732-372781)
chr5 (43-92)||(6865799-6865848)
chr5 (43-112)||(13734352-13734421)
chr5 (43-92)||(14206399-14206448)
chr5 (43-79)||(14914371-14914407)
chr5 (43-79)||(33823729-33823765)
chr5 (44-79)||(16143390-16143425)
chr5 (44-79)||(42699057-42699092)
chr5 (43-77)||(38500942-38500976)
chr5 (43-92)||(5007743-5007792)
chr5 (42-79)||(25364873-25364909)
chr5 (44-77)||(28501592-28501625)
chr5 (47-92)||(33567235-33567280)
chr5 (43-79)||(3771042-3771078)
chr5 (47-79)||(6515474-6515506)
chr5 (43-79)||(9594477-9594513)
chr5 (43-79)||(18695317-18695353)
chr5 (43-79)||(23991170-23991206)
chr5 (43-79)||(26660447-26660483)
chr5 (43-79)||(26932039-26932075)
chr5 (43-79)||(28811428-28811464)
chr5 (44-92)||(30334778-30334826)
chr5 (43-79)||(35814452-35814488)
chr5 (43-79)||(36548416-36548452)
chr5 (43-79)||(36713214-36713250)
[»] chr4 (47 HSPs)
chr4 (45-112)||(28676144-28676211)
chr4 (43-92)||(2109442-2109491)
chr4 (44-91)||(32365680-32365727)
chr4 (38-79)||(11012135-11012176)
chr4 (43-92)||(54036541-54036590)
chr4 (43-79)||(34259814-34259850)
chr4 (44-92)||(39241313-39241361)
chr4 (43-79)||(51359826-51359862)
chr4 (44-79)||(169538-169573)
chr4 (44-79)||(30042134-30042169)
chr4 (44-79)||(39010173-39010208)
chr4 (43-77)||(10994190-10994224)
chr4 (43-77)||(13267516-13267550)
chr4 (43-85)||(32621637-32621679)
chr4 (43-89)||(33093130-33093176)
chr4 (44-86)||(37547065-37547107)
chr4 (43-85)||(41119500-41119542)
chr4 (43-77)||(43168752-43168786)
chr4 (43-85)||(46173549-46173591)
chr4 (43-92)||(4511824-4511873)
chr4 (43-92)||(28657452-28657501)
chr4 (47-92)||(29974339-29974384)
chr4 (43-92)||(30973596-30973645)
chr4 (43-92)||(31657657-31657706)
chr4 (38-79)||(40983088-40983129)
chr4 (43-88)||(41262645-41262690)
chr4 (43-92)||(42490919-42490968)
chr4 (43-92)||(43769722-43769771)
chr4 (43-92)||(46686244-46686292)
chr4 (43-79)||(1796365-1796401)
chr4 (43-79)||(4896536-4896572)
chr4 (32-92)||(4974099-4974159)
chr4 (43-79)||(5208363-5208399)
chr4 (43-79)||(9162065-9162101)
chr4 (44-92)||(11997685-11997733)
chr4 (47-79)||(12694464-12694496)
chr4 (43-79)||(24088600-24088636)
chr4 (43-79)||(27001445-27001481)
chr4 (43-91)||(27384186-27384234)
chr4 (44-92)||(30778276-30778324)
chr4 (43-79)||(34116576-34116612)
chr4 (43-79)||(35017152-35017188)
chr4 (43-79)||(47014938-47014974)
chr4 (43-79)||(47998593-47998629)
chr4 (43-79)||(51377329-51377365)
chr4 (43-79)||(51717318-51717354)
chr4 (43-79)||(55268037-55268073)
[»] chr1 (40 HSPs)
chr1 (43-112)||(40596046-40596115)
chr1 (43-112)||(43612072-43612141)
chr1 (44-92)||(34187275-34187323)
chr1 (44-92)||(41507206-41507254)
chr1 (43-92)||(27687531-27687580)
chr1 (43-92)||(43757598-43757647)
chr1 (43-92)||(49453490-49453539)
chr1 (43-92)||(50797790-50797839)
chr1 (43-79)||(9011644-9011680)
chr1 (44-92)||(40139126-40139174)
chr1 (43-79)||(40612113-40612149)
chr1 (43-79)||(42256459-42256495)
chr1 (43-77)||(39669805-39669839)
chr1 (43-85)||(42539417-42539459)
chr1 (43-77)||(48325805-48325839)
chr1 (43-92)||(1690445-1690494)
chr1 (47-92)||(5477175-5477220)
chr1 (43-92)||(8200086-8200135)
chr1 (43-92)||(33358170-33358219)
chr1 (44-85)||(34974779-34974820)
chr1 (47-92)||(41558007-41558052)
chr1 (43-92)||(45272172-45272221)
chr1 (43-92)||(46903480-46903529)
chr1 (43-92)||(48220155-48220204)
chr1 (44-85)||(48872047-48872088)
chr1 (46-79)||(50035573-50035606)
chr1 (43-79)||(10435834-10435870)
chr1 (43-79)||(11097920-11097956)
chr1 (43-79)||(11947794-11947830)
chr1 (44-92)||(16252771-16252819)
chr1 (44-92)||(16836127-16836175)
chr1 (43-79)||(18610772-18610808)
chr1 (43-79)||(21433437-21433473)
chr1 (43-79)||(27352629-27352665)
chr1 (43-79)||(29489395-29489431)
chr1 (43-79)||(30530610-30530646)
chr1 (45-77)||(36231744-36231776)
chr1 (43-79)||(49425737-49425773)
chr1 (43-79)||(50226915-50226951)
chr1 (43-79)||(52669804-52669840)
[»] chr3 (38 HSPs)
chr3 (43-111)||(47683800-47683868)
chr3 (43-92)||(43169765-43169814)
chr3 (43-79)||(8254026-8254062)
chr3 (43-91)||(11056935-11056983)
chr3 (43-79)||(48405409-48405445)
chr3 (43-79)||(49196695-49196731)
chr3 (44-79)||(462437-462472)
chr3 (44-79)||(11327108-11327143)
chr3 (43-93)||(1765403-1765453)
chr3 (43-77)||(35376589-35376623)
chr3 (45-79)||(47101523-47101557)
chr3 (43-77)||(52564672-52564706)
chr3 (43-77)||(53932429-53932463)
chr3 (43-92)||(23906999-23907048)
chr3 (47-92)||(31997816-31997861)
chr3 (42-79)||(32931954-32931991)
chr3 (43-92)||(44937218-44937267)
chr3 (43-92)||(46952948-46952997)
chr3 (43-92)||(49761318-49761367)
chr3 (43-92)||(50876374-50876423)
chr3 (43-79)||(1901962-1901998)
chr3 (43-79)||(1911408-1911444)
chr3 (43-79)||(3069610-3069646)
chr3 (43-79)||(7867747-7867783)
chr3 (43-79)||(18169156-18169192)
chr3 (43-79)||(20714242-20714278)
chr3 (44-92)||(23868990-23869038)
chr3 (40-92)||(28700468-28700520)
chr3 (44-92)||(28884491-28884539)
chr3 (44-92)||(30580133-30580181)
chr3 (47-79)||(32187144-32187176)
chr3 (43-79)||(36818955-36818991)
chr3 (43-79)||(36869873-36869909)
chr3 (44-92)||(46574087-46574135)
chr3 (43-79)||(47683938-47683974)
chr3 (43-79)||(48945846-48945882)
chr3 (43-79)||(50652387-50652423)
chr3 (43-79)||(55344332-55344368)
[»] chr7 (27 HSPs)
chr7 (43-108)||(2469702-2469767)
chr7 (43-92)||(34992347-34992396)
chr7 (44-79)||(20406541-20406576)
chr7 (43-92)||(22330643-22330692)
chr7 (43-92)||(26041320-26041369)
chr7 (43-92)||(37352002-37352051)
chr7 (43-79)||(4971289-4971325)
chr7 (43-79)||(19426579-19426615)
chr7 (43-91)||(28862094-28862142)
chr7 (43-79)||(37856190-37856226)
chr7 (44-79)||(2347095-2347130)
chr7 (45-92)||(24044759-24044806)
chr7 (44-79)||(33050183-33050218)
chr7 (31-77)||(25940670-25940716)
chr7 (43-92)||(2323303-2323352)
chr7 (47-92)||(23680050-23680095)
chr7 (43-92)||(25887593-25887642)
chr7 (43-92)||(41985112-41985161)
chr7 (43-79)||(13437197-13437233)
chr7 (43-79)||(22692083-22692119)
chr7 (43-79)||(30864453-30864489)
chr7 (43-79)||(31274565-31274601)
chr7 (47-79)||(33223565-33223597)
chr7 (43-79)||(37392042-37392078)
chr7 (44-92)||(37832450-37832498)
chr7 (44-92)||(43444635-43444683)
chr7 (43-79)||(44511138-44511174)
[»] chr6 (21 HSPs)
chr6 (44-113)||(12177577-12177646)
chr6 (44-92)||(2862057-2862105)
chr6 (44-92)||(2881308-2881356)
chr6 (43-79)||(3339535-3339571)
chr6 (43-74)||(237439-237470)
chr6 (43-77)||(11785354-11785388)
chr6 (43-92)||(1897696-1897745)
chr6 (43-92)||(12441537-12441586)
chr6 (43-92)||(28748123-28748172)
chr6 (43-92)||(32149499-32149548)
chr6 (43-79)||(3088972-3089008)
chr6 (43-79)||(9954547-9954583)
chr6 (43-79)||(15666809-15666845)
chr6 (43-79)||(15722539-15722575)
chr6 (44-92)||(16121163-16121211)
chr6 (43-79)||(25127869-25127905)
chr6 (43-79)||(27334857-27334893)
chr6 (43-79)||(27395597-27395633)
chr6 (43-79)||(28965876-28965912)
chr6 (44-92)||(32644623-32644671)
chr6 (43-79)||(32729888-32729924)
[»] chr2 (22 HSPs)
chr2 (43-92)||(9834093-9834142)
chr2 (43-85)||(29795446-29795488)
chr2 (43-79)||(36909879-36909915)
chr2 (43-87)||(42283267-42283311)
chr2 (43-110)||(4263858-4263924)
chr2 (43-78)||(31296882-31296917)
chr2 (44-78)||(4344449-4344483)
chr2 (43-77)||(35171264-35171298)
chr2 (43-92)||(3012857-3012906)
chr2 (38-79)||(5031917-5031958)
chr2 (43-92)||(6646834-6646883)
chr2 (43-92)||(22353187-22353236)
chr2 (43-92)||(37966366-37966415)
chr2 (43-79)||(3299141-3299177)
chr2 (43-79)||(4738608-4738644)
chr2 (44-92)||(7121390-7121438)
chr2 (43-91)||(8482245-8482293)
chr2 (44-92)||(24727426-24727474)
chr2 (44-92)||(25801825-25801873)
chr2 (43-79)||(28508478-28508514)
chr2 (43-79)||(29168724-29168760)
chr2 (43-79)||(33296107-33296143)
[»] scaffold0054 (1 HSPs)
scaffold0054 (43-92)||(31612-31661)
[»] chr8 (30 HSPs)
chr8 (43-92)||(37392140-37392189)
chr8 (43-91)||(5502370-5502418)
chr8 (47-110)||(157070-157133)
chr8 (44-79)||(21273746-21273781)
chr8 (44-79)||(38844826-38844861)
chr8 (43-78)||(44380651-44380686)
chr8 (47-92)||(11138910-11138955)
chr8 (47-92)||(14710905-14710950)
chr8 (43-92)||(30439517-30439566)
chr8 (34-79)||(36497651-36497696)
chr8 (43-92)||(40413361-40413410)
chr8 (43-92)||(41934991-41935040)
chr8 (44-77)||(43873729-43873762)
chr8 (45-90)||(44607702-44607747)
chr8 (44-92)||(1796496-1796544)
chr8 (43-79)||(5771912-5771948)
chr8 (43-79)||(11223895-11223931)
chr8 (43-79)||(12045689-12045725)
chr8 (43-87)||(16487609-16487653)
chr8 (43-79)||(20288532-20288568)
chr8 (43-79)||(21075161-21075197)
chr8 (43-79)||(22852875-22852911)
chr8 (43-79)||(26294188-26294224)
chr8 (43-79)||(26307445-26307481)
chr8 (43-79)||(28927680-28927716)
chr8 (37-77)||(30927969-30928009)
chr8 (43-79)||(36064029-36064065)
chr8 (43-79)||(38128812-38128848)
chr8 (43-79)||(39021479-39021515)
chr8 (43-79)||(45101395-45101431)
[»] scaffold0100 (1 HSPs)
scaffold0100 (43-92)||(44785-44834)
[»] scaffold0662 (1 HSPs)
scaffold0662 (43-79)||(1077-1113)
[»] scaffold0592 (1 HSPs)
scaffold0592 (43-79)||(8343-8379)
[»] scaffold0011 (1 HSPs)
scaffold0011 (43-79)||(219700-219736)
[»] scaffold0003 (1 HSPs)
scaffold0003 (43-79)||(337117-337153)


Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 19 - 311
Target Start/End: Complemental strand, 14508253 - 14507960
Alignment:
Q  19 actgcaaacctctatattatattgagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactcttagtag 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||   ||| ||||||||||||||||||    
T  14508253 actgcaaacctctatattatattgagagaaatgatatttgtacaactattttgtgacaactatctctttcatacgcatattatattcttactcttagtag 14508154  T
Q  119 tacctattagataccaagaattgtaatactaagtcaccccattggaaattaaatgcaaatgtttcttgcctatcattataccacttc-aaattaaaggct 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  14508153 tacctattagataccaagaattgtaatactaagtcaccccattggaaattaaatgcaaatgtttcttgccaatcattataccacttcaaaattaaaggct 14508054  T
Q  218 aggaagaggattatagtaatatccttgacggcgaagtaaaggataaagaaaatctttcaatgaaatctatgccacacctgttctaaaatattgc 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14508053 aggaagaggattatagtaatatccttgacggcgaagtaaaggataaagaaaatctttcaatgaaatctatgccacacctgttctaaaatattgc 14507960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 372781 - 372732
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||| ||||||    
T  372781 agagaaatgatttttgtacaaccattttgtgacaactttctctctcatac 372732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 6865848 - 6865799
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  6865848 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 6865799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 13734421 - 13734352
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 112  Q
    ||||||||||||||||||||||||  || |||||||| ||||| ||||||   |||| ||||||||||||    
T  13734421 agagaaatgatatttgtacaaccactttatgacaactttctctctcatactcacattatattcttactct 13734352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 14206399 - 14206448
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  14206399 agagaaatgatatttgtacaaccattttttgacaactttctctctcatac 14206448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 14914371 - 14914407
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14914371 agagaaatgatatttgtacaaccattttgtgacaact 14914407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 33823765 - 33823729
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| ||||||||||||    
T  33823765 agagaaatgatatttgtacaaccaacttgtgacaact 33823729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 16143390 - 16143425
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  16143390 gagaaatgatatttgtacaaccattttgtgacaact 16143425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 42699057 - 42699092
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  42699057 gagaaatgatatttgtacaaccattttgtgacaact 42699092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 38500942 - 38500976
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  38500942 agagaaatgatatttgtacaaccattttgtgacaa 38500976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 5007792 - 5007743
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||||| || ||||||||| | ||||||||||||    
T  5007792 agagaaatgatatttgaacaacaattttgtgacaattttctctttcatac 5007743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 25364909 - 25364873
Alignment:
Q  42 gagagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  25364909 gagagaaatgatatttgtacaacca-cttgtgacaact 25364873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 77
Target Start/End: Original strand, 28501592 - 28501625
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    |||||||||||||||||||||||| |||||||||    
T  28501592 gagaaatgatatttgtacaaccattttgtgacaa 28501625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 33567280 - 33567235
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactttctctctcatac 33567235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 3771078 - 3771042
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||| ||||||||||| |||||||||||    
T  3771078 agagaaatgatatctgtacaaccattttgtgacaact 3771042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 6515506 - 6515474
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||| ||||||||||||    
T  6515506 aaatgatatttgtacaaccaccttgtgacaact 6515474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 9594477 - 9594513
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  9594477 agagaaatgatatttgtacaaccaatttgtgacaact 9594513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 18695317 - 18695353
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  18695317 agagaaatgatatttgtacaaccattttgtaacaact 18695353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 23991206 - 23991170
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  23991206 agagaaatgatatttgtacaaccactttgtgacaact 23991170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 26660483 - 26660447
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||| |||| |||||||||||    
T  26660483 agagaaatgatatttgtacatccattttgtgacaact 26660447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 26932075 - 26932039
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||| |||| |||||||||||    
T  26932075 agagaaatgatatttgtacatccattttgtgacaact 26932039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 28811428 - 28811464
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  28811428 agagaaatgatatttgtacaaccactttgtgacaact 28811464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 30334826 - 30334778
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||  || |||||| | ||||||||||||    
T  30334826 gagaaatgatatttgtacaaccactttatgacaattttctctttcatac 30334778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 35814452 - 35814488
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  35814452 agagaaatgatatttgtacaaccattttgtgataact 35814488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 36548452 - 36548416
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||| |||||| |||||||||||    
T  36548452 agagaaatgatatttgtataaccattttgtgacaact 36548416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 36713250 - 36713214
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  36713250 agagaaatgatatttgtacaaccactttgtgacaact 36713214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 5e-16; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 28676211 - 28676144
Alignment:
Q  45 agaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 112  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||   |||| ||||||||||||    
T  28676211 agaaatgatatttgtacaaccattttgtgacaactttctctttcatactcacattatattcttactct 28676144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 2109442 - 2109491
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  2109442 agagaaatgatatttgtacaaccatcttttgacaactttctctttcatac 2109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 32365727 - 32365680
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 91  Q
    |||||||||||||||||||||||| ||||||||||| ||||| |||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactttctctctcata 32365680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 11012135 - 11012176
Alignment:
Q  38 tattgagagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  11012135 tattgagagaaatgatatttgtacaaccattttatgacaact 11012176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 54036590 - 54036541
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  54036590 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatac 54036541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 34259814 - 34259850
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34259814 agagaaatgatatttgtacaaccattttgtgacaact 34259850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 39241361 - 39241313
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactttctctctcatac 39241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 51359862 - 51359826
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  51359862 agagaaatgatatttgtacaaccattttgtgacaact 51359826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 169573 - 169538
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaact 169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 30042134 - 30042169
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  30042134 gagaaatgatatttgtacaaccattttgtgacaact 30042169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 39010208 - 39010173
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaact 39010173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 10994224 - 10994190
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  10994224 agagaaatgatatttgtacaaccattttgtgacaa 10994190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 13267550 - 13267516
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  13267550 agagaaatgatatttgtacaaccattttgtgacaa 13267516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 32621637 - 32621679
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    |||||||||||||||| |||||||| ||||||||||| |||||    
T  32621637 agagaaatgatatttgcacaaccattttgtgacaactttctct 32621679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 33093176 - 33093130
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttca 89  Q
    |||||||||||||||||||||| || ||||||||||| ||| |||||    
T  33093176 agagaaatgatatttgtacaactattttgtgacaactttctttttca 33093130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 37547065 - 37547107
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctt 86  Q
    |||||||||||||||||||||||  ||||||||||| ||||||    
T  37547065 gagaaatgatatttgtacaaccactttgtgacaactttctctt 37547107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 41119542 - 41119500
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  41119542 agagaaatgatatttgtacaaccactttgtgacaactttctct 41119500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 43168786 - 43168752
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  43168786 agagaaatgatatttgtacaaccattttgtgacaa 43168752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 46173549 - 46173591
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  46173549 agagaaatgatatttgtacaaccactttgtgacaactttctct 46173591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 4511824 - 4511873
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||| |||||| || |||||||| ||||| ||||||    
T  4511824 agagaaatgatatttgtataaccattttatgacaactttctctctcatac 4511873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 28657501 - 28657452
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  28657501 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 28657452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 29974384 - 29974339
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||| ||||| || ||||||||||| ||||||||||||    
T  29974384 aaatgatatttgaacaactattttgtgacaactttctctttcatac 29974339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 30973596 - 30973645
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  || |||||||| | ||||||||||    
T  30973596 agagaaatgatatttgtacaaccactttatgacaactttttctttcatac 30973645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 31657657 - 31657706
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  31657657 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 31657706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 40983129 - 40983088
Alignment:
Q  38 tattgagagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||| ||||||||||||||||||||||||| || ||||||||    
T  40983129 tatttagagaaatgatatttgtacaaccatattttgacaact 40983088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 41262690 - 41262645
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttc 88  Q
    |||||||||||||||||||||  || ||||||||||| ||||||||    
T  41262690 agagaaatgatatttgtacaattattttgtgacaactttctctttc 41262645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 42490919 - 42490968
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  || |||||||| ||||| ||||||    
T  42490919 agagaaatgatatttgtacaaccactttttgacaactttctctctcatac 42490968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 43769722 - 43769771
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  43769722 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 43769771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 46686244 - 46686292
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| |||| |||||| ||||| ||||||    
T  46686244 agagaaatgatatttgtacaaccattttgt-acaactttctctctcatac 46686292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 1796365 - 1796401
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  1796365 agagaaatgatatttgtacaaccaatttgtgacaact 1796401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 4896572 - 4896536
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  4896572 agagaaatgatatttgtacaaccactttgtgacaact 4896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 4974099 - 4974159
Alignment:
Q  32 atattatattgagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||  ||||||||||||||||||||| || || | |||||| ||||| ||||||    
T  4974099 atattatattatgagaaatgatatttgtacaactattttttaacaactttctctctcatac 4974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 5208399 - 5208363
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  5208399 agagaaatgatatttgtacaaccaatttgtgacaact 5208363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 9162065 - 9162101
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  9162065 agagaaatgatatttgtacaatcattttgtgacaact 9162101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 11997685 - 11997733
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||  ||||||||||| | | ||||||||    
T  11997685 gagaaatgatatttgtacaaccactttgtgacaactttatttttcatac 11997733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 12694496 - 12694464
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||| |||||||||||    
T  12694496 aaatgatatttgtacaaccattttgtgacaact 12694464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 24088636 - 24088600
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  24088636 agagaaatgatatttgtacaaccattttatgacaact 24088600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 27001481 - 27001445
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  27001481 agagaaatgatatttgtacaaccaatttgtgacaact 27001445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 27384186 - 27384234
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 91  Q
    ||||||||||||||||||||||||| || | |||||| ||||| |||||    
T  27384186 agagaaatgatatttgtacaaccattttattacaactttctctctcata 27384234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 30778324 - 30778276
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  30778324 gagaaatgatatttgtacagccaatttgtgacaactttctctctcatac 30778276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 34116612 - 34116576
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  34116612 agagaaatgatatttgtacaaccactttgtgacaact 34116576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 35017152 - 35017188
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  35017152 agagaaatgatatttgtacaactattttgtgacaact 35017188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 47014938 - 47014974
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  47014938 agagaaatgatatttgtacaactattttgtgacaact 47014974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 47998593 - 47998629
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  47998593 agagaaatgatatttgtacaaccattttgtaacaact 47998629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 51377365 - 51377329
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  51377365 agagaaatgatatttgtacaaccaatttgtgacaact 51377329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 51717354 - 51717318
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  51717354 agagaaatgatatttgtacaaccaatttgtgacaact 51717318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 55268073 - 55268037
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  55268073 agagaaatgatatttgtacaaccaatttgtgacaact 55268037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 40596115 - 40596046
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 112  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||   |||| ||||||||||||    
T  40596115 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattatattcttactct 40596046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 43612141 - 43612072
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactct 112  Q
    ||||||||||||||||||||||||| || |||||||| ||||| |||||| | |||| ||||||||||||    
T  43612141 agagaaatgatatttgtacaaccattttatgacaactttctctctcatacatacattatattcttactct 43612072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 34187275 - 34187323
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| |||||||||| ||| ||||||||||||    
T  34187275 gagaaatgatatttgtacaactatcttgtgaccactttctctttcatac 34187323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 41507254 - 41507206
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| ||||||||||| ||||| ||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactttctctctcatac 41507206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 27687580 - 27687531
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  27687580 agagaaatgatatttgtacaaccattttgtgacaactttatctctcatac 27687531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 43757598 - 43757647
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||||||||    
T  43757598 agagaaatgatatttgtacaaccattttgatacaactttctctttcatac 43757647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 49453490 - 49453539
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  49453490 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 49453539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 50797790 - 50797839
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  50797790 agagaaatgatatttgtacaatcattttgtgacaactttctctctcatac 50797839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 9011644 - 9011680
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9011644 agagaaatgatatttgtacaaccattttgtgacaact 9011680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 40139126 - 40139174
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  40139126 gagaaatgatatttgtacaaccattttatgacaactttctctctcatac 40139174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 40612113 - 40612149
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40612113 agagaaatgatatttgtacaaccattttgtgacaact 40612149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 42256459 - 42256495
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  42256459 agagaaatgatatttgtacaaccattttgtgacaact 42256495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 39669805 - 39669839
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  39669805 agagaaatgatatttgtacaaccattttgtgacaa 39669839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 42539417 - 42539459
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    |||||||||||||||||||||||||  |||||||||| |||||    
T  42539417 agagaaatgatatttgtacaaccattatgtgacaactttctct 42539459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 48325839 - 48325805
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  48325839 agagaaatgatatttgtacaaccattttgtgacaa 48325805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 1690445 - 1690494
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||| |||||||||||||||| ||||||||||| | ||| ||||||    
T  1690445 agagaaataatatttgtacaaccattttgtgacaactttttctctcatac 1690494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 5477220 - 5477175
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  5477220 aaatgatatttgtacaaccactttgtgacaactttctctctcatac 5477175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 8200086 - 8200135
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  8200086 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 8200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 33358219 - 33358170
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  33358219 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 33358170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 34974820 - 34974779
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  34974820 gagaaatgatatttatacaaccattttgtgacaactttctct 34974779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 41558007 - 41558052
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| |||||||||||  |||| ||||||    
T  41558007 aaatgatatttgtacaaccattttgtgacaactcactctctcatac 41558052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 45272221 - 45272172
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  || |||||||| ||||| ||||||    
T  45272221 agagaaatgatatttgtacaaccactttttgacaactttctctctcatac 45272172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 46903480 - 46903529
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| |||  |||||| ||||| ||||||    
T  46903480 agagaaatgatatttgtacaaccattttgatacaactttctctctcatac 46903529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 48220204 - 48220155
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  48220204 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 48220155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 48872088 - 48872047
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    |||||||||||||||||||||||| || |||||||| |||||    
T  48872088 gagaaatgatatttgtacaaccattttttgacaactttctct 48872047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 50035606 - 50035573
Alignment:
Q  46 gaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| |||||||||||    
T  50035606 gaaatgatatttgtacaaccattttgtgacaact 50035573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 10435870 - 10435834
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||| |||||||||| |||||||||||    
T  10435870 agagaaatgatattcgtacaaccattttgtgacaact 10435834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 11097956 - 11097920
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||| |||| |||||||||||    
T  11097956 agagaaatgatatttgtacatccattttgtgacaact 11097920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 11947794 - 11947830
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  11947794 agagaaatgatatttgtacaaccattttatgacaact 11947830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 16252819 - 16252771
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| ||   |||||| ||||||||||||    
T  16252819 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatac 16252771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 16836175 - 16836127
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||| ||| ||||||||||| | ||| ||||||    
T  16836175 gagaaatgatatttgtacaatcattttgtgacaactttttctctcatac 16836127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 18610772 - 18610808
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  18610772 agagaaatgatatttgtacaactattttgtgacaact 18610808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 21433473 - 21433437
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  21433473 agagaaatgatatttgtacaaccattttgtaacaact 21433437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 27352629 - 27352665
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  27352629 agagaaatgatatttgtacaaccattttgtgataact 27352665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 29489431 - 29489395
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  29489431 agagaaatgatatttgtacaaccattttgtgataact 29489395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 30530646 - 30530610
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  30530646 agagaaatgatatttatacaaccattttgtgacaact 30530610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 77
Target Start/End: Complemental strand, 36231776 - 36231744
Alignment:
Q  45 agaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||| |||||||||    
T  36231776 agaaatgatatttgtacaaccattttgtgacaa 36231744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 49425737 - 49425773
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  49425737 agagaaatgatatttgtacaaccactttgtgacaact 49425773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 50226951 - 50226915
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  50226951 agagaaatgatatttgtacaaccactttgtgacaact 50226915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 52669840 - 52669804
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||| |||||||||||||||||| |||||||||||    
T  52669840 agagaagtgatatttgtacaaccattttgtgacaact 52669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 47683800 - 47683868
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactc 111  Q
    ||||||||||||||||||||||||| ||||||||||| ||||| ||||||   |||||| |||||||||    
T  47683800 agagaaatgatatttgtacaaccattttgtgacaactttctctctcatactcacattgtgttcttactc 47683868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 43169814 - 43169765
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| ||||||||||| | ||| ||||||    
T  43169814 agagaaatgatatttgtacaaccattttgtgacaactttttctctcatac 43169765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 8254026 - 8254062
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8254026 agagaaatgatatttgtacaaccattttgtgacaact 8254062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 11056983 - 11056935
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 91  Q
    |||||||||||||||||||||| || || |||||||| |||||||||||    
T  11056983 agagaaatgatatttgtacaacaattttttgacaactttctctttcata 11056935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 48405409 - 48405445
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  48405409 agagaaatgatatttgtacaaccattttgtgacaact 48405445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 49196695 - 49196731
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  49196695 agagaaatgatatttgtacaaccattttgtgacaact 49196731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 462472 - 462437
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaact 462437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 11327108 - 11327143
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaact 11327143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 1765403 - 1765453
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacg 93  Q
    ||||||||||||||||||||  ||| ||||||||||| ||||| |||||||    
T  1765403 agagaaatgatatttgtacattcattttgtgacaactttctctctcatacg 1765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 35376623 - 35376589
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  35376623 agagaaatgatatttgtacaaccattttgtgacaa 35376589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 79
Target Start/End: Original strand, 47101523 - 47101557
Alignment:
Q  45 agaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||| |||||||||||    
T  47101523 agaaatgatatttgtacaaccattttgtgacaact 47101557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 52564706 - 52564672
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  52564706 agagaaatgatatttgtacaaccattttgtgacaa 52564672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 53932463 - 53932429
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  53932463 agagaaatgatatttgtacaaccattttgtgacaa 53932429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 23907048 - 23906999
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||||  ||| |||||| ||||| ||||||    
T  23907048 agagaaatgatatttgtacaaccattatgttacaactttctctctcatac 23906999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 31997816 - 31997861
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  31997816 aaatgatatttgtacaaccactttgtgacaactttctttttcatac 31997861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 32931991 - 32931954
Alignment:
Q  42 gagagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||||  |||||||||||    
T  32931991 gagagaaatgatatttgtacaaccaatttgtgacaact 32931954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 44937218 - 44937267
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||| || || |||||||| ||||||| ||||    
T  44937218 agagaaatgatatttgtacaacaattttttgacaactttctcttttatac 44937267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 46952948 - 46952997
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| || ||| |||| ||||| ||||||    
T  46952948 agagaaatgatatttgtacaaccattttttgataactttctctctcatac 46952997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 49761318 - 49761367
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  49761318 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 49761367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 50876423 - 50876374
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||| || || |||||||| ||||| ||||||    
T  50876423 agagaaatgatatttgtacaacaattttttgacaactttctctatcatac 50876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 1901998 - 1901962
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  1901998 agagaaatgatatttgtacaaccactttgtgacaact 1901962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 1911444 - 1911408
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  1911444 agagaaatgatatttgtacaaccactttgtgacaact 1911408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 3069646 - 3069610
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  3069646 agagaaatgatatttgtacaaccaatttgtgacaact 3069610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 7867783 - 7867747
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  7867783 agagaaatgatatttgtacaactattttgtgacaact 7867747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 18169156 - 18169192
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  18169156 agagaaatgatatttgtacaaccactttgtgacaact 18169192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 20714242 - 20714278
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  20714242 agagaaatgatatttgtacaaccaatttgtgacaact 20714278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 23869038 - 23868990
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| || | |||| | ||||||||||||    
T  23869038 gagaaatgatatttgtacaaccattttataacaattttctctttcatac 23868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 28700468 - 28700520
Alignment:
Q  40 ttgagagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||| |||||||| || |||||||| | ||| ||||||    
T  28700468 ttgagagaaatgatatttgaacaaccattttttgacaactttatctctcatac 28700520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 28884491 - 28884539
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||| ||||||||||||||||  |||||||||| ||||| ||||||    
T  28884491 gagaaataatatttgtacaaccattatgtgacaactttctctctcatac 28884539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 30580133 - 30580181
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||| ||||||||| || |||||||| | ||||||||||    
T  30580133 gagaaatgatatttatacaaccattttatgacaactttatctttcatac 30580181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 32187144 - 32187176
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||| |||||||||||    
T  32187144 aaatgatatttgtacaaccattttgtgacaact 32187176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 36818955 - 36818991
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  36818955 agagaaatgatatttgtacaaccaatttgtgacaact 36818991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 36869909 - 36869873
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  36869909 agagaaatgatatttgtacaaccattttttgacaact 36869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 46574087 - 46574135
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| ||||||  ||| ||||| ||||||    
T  46574087 gagaaatgatatttgtacaaccattttgtgaacactttctctctcatac 46574135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 47683974 - 47683938
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||| |||||||||||||||||||| |||||||||||    
T  47683974 agagtaatgatatttgtacaaccattttgtgacaact 47683938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 48945846 - 48945882
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  48945846 agagaaatgatatttgtacaaccactttgtgacaact 48945882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 50652387 - 50652423
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  50652387 agagaaatgatatttgtacaaccattttatgacaact 50652423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 55344368 - 55344332
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  55344368 agagaaatgatatttgtacaaccattttgtgataact 55344332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 2469702 - 2469767
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattctta 108  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||||||   |||||||||||||    
T  2469702 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatactcacattgtattctta 2469767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 34992396 - 34992347
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||    
T  34992396 agagaaatgatatttgtacaaccattttatgacaactctctctttcatac 34992347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 20406541 - 20406576
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||||||||||||||    
T  20406541 gagaaatgatatttgtacaaccatcttgtgacaact 20406576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 22330692 - 22330643
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  22330692 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 22330643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 26041320 - 26041369
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||| |||||||||| || |||||||| ||||||||||||    
T  26041320 agagaaatgatattcgtacaaccattttatgacaactttctctttcatac 26041369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 37352051 - 37352002
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| ||||||    
T  37352051 agagaaatgatatttgtacaaccactttgtgacaactttctctctcatac 37352002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 4971289 - 4971325
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4971289 agagaaatgatatttgtacaaccattttgtgacaact 4971325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 19426579 - 19426615
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19426579 agagaaatgatatttgtacaaccattttgtgacaact 19426615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 28862142 - 28862094
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 91  Q
    |||||||||||||||||||| |||| || |||||||| |||||||||||    
T  28862142 agagaaatgatatttgtacatccattttatgacaactttctctttcata 28862094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 37856226 - 37856190
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  37856226 agagaaatgatatttgtacaaccattttgtgacaact 37856190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 2347130 - 2347095
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  2347130 gagaaatgatatttgtacaaccattttgtgacaact 2347095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 92
Target Start/End: Complemental strand, 24044806 - 24044759
Alignment:
Q  45 agaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||  || ||||||||||| ||||||||||||    
T  24044806 agaaatgatatttgtacaattattttgtgacaactctctctttcatac 24044759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 33050183 - 33050218
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaact 33050218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 25940716 - 25940670
Alignment:
Q  31 tatattatattgagagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    |||||| | |||||||||||||||||||||||||||| |||| ||||    
T  25940716 tatattttcttgagagaaatgatatttgtacaaccattttgtaacaa 25940670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 2323303 - 2323352
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||| || || |||||||| ||||| ||||||    
T  2323303 agagaaatgatatttgtacaacaattttatgacaactttctctctcatac 2323352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 23680095 - 23680050
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||| || ||||||||||| ||| ||||||||    
T  23680095 aaatgatatttgtacaactattttgtgacaactttctttttcatac 23680050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 25887593 - 25887642
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  25887593 agagaaatgatatttgtacatccactttgtgacaactttctctctcatac 25887642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 41985161 - 41985112
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| ||  ||||||||||| ||||| ||||||    
T  41985161 agagaaatgatatttgtacaatcaatttgtgacaactttctctctcatac 41985112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 13437197 - 13437233
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||| |||||||| |||||||||||    
T  13437197 agagaaatgatatttgcacaaccattttgtgacaact 13437233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 22692083 - 22692119
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  22692083 agagaaatgatatttgtacaaccattttatgacaact 22692119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 30864489 - 30864453
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  30864489 agagaaatgatatttgtacaaccaatttgtgacaact 30864453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 31274601 - 31274565
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  31274601 agagaaatgatatttgtacaaccaatttgtgacaact 31274565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 33223597 - 33223565
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||| |||||||||||    
T  33223597 aaatgatatttgtacaaccattttgtgacaact 33223565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 37392042 - 37392078
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  37392042 agagaaatgatatttgtacaaccattttttgacaact 37392078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 37832450 - 37832498
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| || ||||||||||| | ||| ||||||    
T  37832450 gagaaatgatatttgtacaactattttgtgacaactctttctctcatac 37832498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 43444635 - 43444683
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||  || |||||||| ||||| ||||||    
T  43444635 gagaaatgatatttgtacaaccactttatgacaactttctctctcatac 43444683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 44511138 - 44511174
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||| |||||||||| |||||||||||    
T  44511138 agagaaatgatattcgtacaaccattttgtgacaact 44511174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 12177577 - 12177646
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttactctt 113  Q
    |||||||| |||||||||||| || ||||||||||| ||||||||||||   |||| |||||||||||||    
T  12177577 gagaaatgttatttgtacaactattttgtgacaactttctctttcatactcacattatattcttactctt 12177646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 2862057 - 2862105
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  2862057 gagaaataatatttgtacaactatcttgtgacaactatttctctcatac 2862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 2881308 - 2881356
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||| ||||||||||||| |||||||||||||||| ||| ||||||    
T  2881308 gagaaataatatttgtacaactatcttgtgacaactatttctctcatac 2881356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 3339571 - 3339535
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3339571 agagaaatgatatttgtacaaccattttgtgacaact 3339535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 74
Target Start/End: Complemental strand, 237470 - 237439
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtga 74  Q
    ||||||||||||||||||||||||||||||||    
T  237470 agagaaatgatatttgtacaaccatcttgtga 237439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Original strand, 11785354 - 11785388
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  11785354 agagaaatgatatttgtacaaccattttgtgacaa 11785388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 1897696 - 1897745
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  || |||||||| |||||| |||||    
T  1897696 agagaaatgatatttgtacaaccactttatgacaactttctcttacatac 1897745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 12441537 - 12441586
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||| |  ||||||||||| ||||| ||||||    
T  12441537 agagaaatgatatttgtacaactactttgtgacaactttctctctcatac 12441586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 28748123 - 28748172
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  28748123 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 28748172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 32149499 - 32149548
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||| |||||||||||||||  ||||||||||| ||||| ||||||    
T  32149499 agagaaataatatttgtacaaccactttgtgacaactttctctctcatac 32149548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 3088972 - 3089008
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| | |||||||||    
T  3088972 agagaaatgatatttgtacaaccatttagtgacaact 3089008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 9954547 - 9954583
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  9954547 agagaaatgatatttgtacaaccaatttgtgacaact 9954583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 15666845 - 15666809
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  15666845 agagaaatgatatttgtacaaccattttctgacaact 15666809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 15722575 - 15722539
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  15722575 agagaaatgatatttgtacaatcattttgtgacaact 15722539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 16121163 - 16121211
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| ||   |||||| ||||||||||||    
T  16121163 gagaaatgatatttgtacaaccatttttgtacaactttctctttcatac 16121211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 25127905 - 25127869
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  25127905 agagaaatgatatttgtacaaccattttgtaacaact 25127869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 27334857 - 27334893
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  27334857 agagaaatgatatttgtacaactattttgtgacaact 27334893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 27395597 - 27395633
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  27395597 agagaaatgatatttgtacaactattttgtgacaact 27395633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 28965912 - 28965876
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  28965912 agagaaatgatatttgtacaaccattttgttacaact 28965876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 32644623 - 32644671
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| || || |||||||| ||||| ||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactttctctctcatac 32644671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 32729888 - 32729924
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  32729888 agagaaatgatatttgtacaaccattttctgacaact 32729924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 9834142 - 9834093
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||||    
T  9834142 agagaaatgatatttatacaaccattttatgacaactatctctttcatac 9834093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 29795446 - 29795488
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctct 85  Q
    ||||||||||||||||||||||||| ||||||||||| |||||    
T  29795446 agagaaatgatatttgtacaaccattttgtgacaactttctct 29795488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 36909915 - 36909879
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36909915 agagaaatgatatttgtacaaccattttgtgacaact 36909879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 42283311 - 42283267
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctcttt 87  Q
    ||||||||||||||||||||||||  ||||||||||| |||||||    
T  42283311 agagaaatgatatttgtacaaccactttgtgacaactctctcttt 42283267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 4263924 - 4263858
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttact 110  Q
    ||||||||||||||||||||| ||| || |||||||| ||||||||||||   |||| ||||||||||    
T  4263924 agagaaatgatatttgtacaa-cattttttgacaactttctctttcatactcacattatattcttact 4263858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 31296917 - 31296882
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaac 78  Q
    ||||||||||||||||||||||||| ||||||||||    
T  31296917 agagaaatgatatttgtacaaccattttgtgacaac 31296882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 4344449 - 4344483
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaac 78  Q
    |||||||||||||||||||||||| ||||||||||    
T  4344449 gagaaatgatatttgtacaaccattttgtgacaac 4344483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 77
Target Start/End: Complemental strand, 35171298 - 35171264
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||||||||||||||||||||||| |||||||||    
T  35171298 agagaaatgatatttgtacaaccattttgtgacaa 35171264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 3012906 - 3012857
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  3012906 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 3012857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 5031917 - 5031958
Alignment:
Q  38 tattgagagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||| ||||||||||||||||||||||||| |||| ||||||    
T  5031917 tattaagagaaatgatatttgtacaaccattttgtaacaact 5031958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 6646834 - 6646883
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  6646834 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 6646883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 22353236 - 22353187
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||| ||| ||||||||||| ||| | ||||||    
T  22353236 agagaaatgatatttgtacaatcattttgtgacaactttctttctcatac 22353187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 37966366 - 37966415
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||  ||||||||||| | ||| ||||||    
T  37966366 agagaaatgatatttgtacaaccaatttgtgacaactttttctctcatac 37966415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 3299177 - 3299141
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  3299177 agagaaatgatatttgtacaaccattttatgacaact 3299141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 4738644 - 4738608
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  4738644 agagaaatgatatttgtacaaccactttgtgacaact 4738608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 7121390 - 7121438
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||| |||||| |||| |||||| ||||| ||||||    
T  7121390 gagaaatgatatttgtataaccattttgtaacaactttctctctcatac 7121438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 8482293 - 8482245
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 91  Q
    ||||||||||||||||||||||||  || |||||||| ||||| |||||    
T  8482293 agagaaatgatatttgtacaaccactttatgacaactttctctctcata 8482245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 24727426 - 24727474
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||| |||  |||||| ||||| ||||||    
T  24727426 gagaaatgatatttgtacaaccattttggtacaactttctctctcatac 24727474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Complemental strand, 25801873 - 25801825
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||  ||||||||||| | ||| ||||||    
T  25801873 gagaaatgatatttgtacaaccaatttgtgacaactttatctctcatac 25801825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 28508478 - 28508514
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||| |||||||||||||||||||| |||||||||||    
T  28508478 agagtaatgatatttgtacaaccattttgtgacaact 28508514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 29168724 - 29168760
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  29168724 agagaaatgatatttgtacaaccattttttgacaact 29168760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 33296143 - 33296107
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  33296143 agagaaatgatatttgtacaaccactttgtgacaact 33296107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 31661 - 31612
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  31661 agagaaatgatatttgtacaaccattttttgacaactttctctctcatac 31612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 37392189 - 37392140
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  37392189 agagaaatgatatttgtacaaccattttttgacaactttctctctcatac 37392140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 5502370 - 5502418
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcata 91  Q
    ||||||||||||||||||||||||  ||||||||||| ||||| |||||    
T  5502370 agagaaatgatatttgtacaaccactttgtgacaactttctctctcata 5502418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 157070 - 157133
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatacgtgcattgtattcttact 110  Q
    ||||||||||||||||||||| ||| ||||||| ||||| |||||| | |||| |||| |||||    
T  157070 aaatgatatttgtacaaccattttgcgacaactttctctctcatacttacattatatttttact 157133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 21273781 - 21273746
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  21273781 gagaaatgatatttgtacaaccattttgtgacaact 21273746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 38844861 - 38844826
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||||| |||||||||||    
T  38844861 gagaaatgatatttgtacaaccattttgtgacaact 38844826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 78
Target Start/End: Complemental strand, 44380686 - 44380651
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaac 78  Q
    ||||||||||||||||||||||||| ||||||||||    
T  44380686 agagaaatgatatttgtacaaccattttgtgacaac 44380651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 11138910 - 11138955
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||| || ||||||||||| ||||| ||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactttctctctcatac 11138955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Complemental strand, 14710950 - 14710905
Alignment:
Q  47 aaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||||||||||| ||| ||||||||||| ||||| ||||||    
T  14710950 aaatgatatttgtacaatcattttgtgacaactttctctctcatac 14710905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 30439566 - 30439517
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  30439566 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 30439517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 36497651 - 36497696
Alignment:
Q  34 attatattgagagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||| || |||||||||||||||||||||| || |||||||||||    
T  36497651 attattttaagagaaatgatatttgtacaactattttgtgacaact 36497696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 40413410 - 40413361
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||  || ||||||||||| ||||| ||||||    
T  40413410 agagaaatgatatttgtacaattattttgtgacaactttctctctcatac 40413361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 41934991 - 41935040
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    ||||||||| ||||||||||||||| ||||||||| | ||||| ||||||    
T  41934991 agagaaatggtatttgtacaaccattttgtgacaattttctctctcatac 41935040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 77
Target Start/End: Complemental strand, 43873762 - 43873729
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    |||||||||||||||||||||||| |||||||||    
T  43873762 gagaaatgatatttgtacaaccattttgtgacaa 43873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Original strand, 44607702 - 44607747
Alignment:
Q  45 agaaatgatatttgtacaaccatcttgtgacaactatctctttcat 90  Q
    ||||||||||||||||||||||| | ||||||||| ||||| ||||    
T  44607702 agaaatgatatttgtacaaccatttggtgacaactttctctctcat 44607747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 1796496 - 1796544
Alignment:
Q  44 gagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||||||||||  ||||||||||| ||| | ||||||    
T  1796496 gagaaatgatatttgtacaaccactttgtgacaactttctttctcatac 1796544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 5771948 - 5771912
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||| |||||||| |||||||||||    
T  5771948 agagaaatgatatttgaacaaccattttgtgacaact 5771912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 11223931 - 11223895
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||| |||| |||||||||||    
T  11223931 agagaaatgatatttgtacatccattttgtgacaact 11223895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 12045725 - 12045689
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| | |||||||||    
T  12045725 agagaaatgatatttgtacaaccatttagtgacaact 12045689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 16487609 - 16487653
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctcttt 87  Q
    |||||||||||||||| |||||||| || |||||||| |||||||    
T  16487609 agagaaatgatatttgaacaaccattttatgacaactttctcttt 16487653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 20288532 - 20288568
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  20288532 agagaaatgatatttgtacaaccaatttgtgacaact 20288568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 21075161 - 21075197
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  21075161 agagaaatgatatttgtacaaccaatttgtgacaact 21075197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 22852911 - 22852875
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  22852911 agagaaatgatatttgtacaaccactttgtgacaact 22852875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 26294188 - 26294224
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||| |||||||||| |||||||||||    
T  26294188 agagaaatgatattggtacaaccattttgtgacaact 26294224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 26307445 - 26307481
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||| |||||||||| |||||||||||    
T  26307445 agagaaatgatattggtacaaccattttgtgacaact 26307481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 28927680 - 28927716
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  28927680 agagaaatgatatttgtacaaccactttgtgacaact 28927716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 77
Target Start/End: Complemental strand, 30928009 - 30927969
Alignment:
Q  37 atattgagagaaatgatatttgtacaaccatcttgtgacaa 77  Q
    ||||| ||||||||||||||||||||||||  |||||||||    
T  30928009 atatttagagaaatgatatttgtacaaccaatttgtgacaa 30927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 36064029 - 36064065
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  36064029 agagaaatgatatttgtacaatcattttgtgacaact 36064065  T

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Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 38128848 - 38128812
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||| |||||||||||||| |||||||||||    
T  38128848 agagaaatgacatttgtacaaccattttgtgacaact 38128812  T

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Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 39021515 - 39021479
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  39021515 agagaaatgatatttgtacaaccattttgtgataact 39021479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 45101395 - 45101431
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  45101395 agagaaatgatatttgtacaaccactttgtgacaact 45101431  T

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Target: scaffold0100 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 44785 - 44834
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaactatctctttcatac 92  Q
    |||||||||||||||| ||| |||| ||||||||||| ||||| ||||||    
T  44785 agagaaatgatatttgaacatccattttgtgacaactttctctctcatac 44834  T

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Target: scaffold0662 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 1077 - 1113
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||||||||||||||||| || |||||||||||    
T  1077 agagaaatgatatttgtacaactattttgtgacaact 1113  T

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Target: scaffold0592 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 8379 - 8343
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    |||||||| |||||||||||||||| |||||||||||    
T  8379 agagaaattatatttgtacaaccattttgtgacaact 8343  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 219736 - 219700
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||  |||||||||||    
T  219736 agagaaatgatatttgtacaaccactttgtgacaact 219700  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 337117 - 337153
Alignment:
Q  43 agagaaatgatatttgtacaaccatcttgtgacaact 79  Q
    ||||||||||||||||||||||||| || ||||||||    
T  337117 agagaaatgatatttgtacaaccattttctgacaact 337153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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