View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19683_high_6 (Length: 323)
Name: NF19683_high_6
Description: NF19683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19683_high_6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 16 - 323
Target Start/End: Original strand, 45955148 - 45955462
Alignment:
| Q |
16 |
tgaaaagagtgtagaacctgaatttgagtttgaagtcttgctccattgaaatcagaaagagaagaagctaaaggagggaaagatagttgattctgttgga |
115 |
Q |
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| T |
45955148 |
tgaaaagagtgtagaacctgaatatgagtttgaagtcttgctccattgaaatcagaaagagaagaagctaaaggagggaaagatagttgattctgttgga |
45955247 |
T |
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| Q |
116 |
gtgccaccaatcttgccatgtttggttgtgaggtgtgtataggatgaaattaattatgaagtttgaagtgtgtttcatttcctcttattatgttgcgata |
215 |
Q |
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| T |
45955248 |
gtgccaccaatcttgccatgtttggttgtgaggtgtgtataggatgaaattaattatgaagtttgaagtgtgtttcatttcctcttattatgttgcgata |
45955347 |
T |
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| Q |
216 |
agactaggacttacctccacctcacttcccttcaattcacagcctttcatttccctccatcttttaacaccttttttagaat-------ataataataaa |
308 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
45955348 |
agactaggacttacctccacctcacttcccttcaattcacagcctttcatttccctccatcttttaacaccttttttagaataataataataataataaa |
45955447 |
T |
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| Q |
309 |
atcatttattaatta |
323 |
Q |
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||||||||||||||| |
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| T |
45955448 |
atcatttattaatta |
45955462 |
T |
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