View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19687_high_55 (Length: 249)
Name: NF19687_high_55
Description: NF19687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19687_high_55 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 15419405 - 15419645
Alignment:
| Q |
1 |
tgtgttttcgacaaaatggtacccataactgcaaacatagataagttggttgtgtattatcatgaatctaaacagactaaaacatgctacattgaacaaa |
100 |
Q |
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| T |
15419405 |
tgtgttttcgacaaaatggtacccataactgcaaacatggattagttggttgtgtattatcatgaatctaaacagactaaaacatgctaaattgaacaaa |
15419504 |
T |
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| Q |
101 |
atgcttatatgtgaaacatgttccttattaaagaatataaacaaacctcggcaaatttcacagcttcagccatggcttcaaaagtgagaatggcaccacc |
200 |
Q |
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| T |
15419505 |
atgcttatatgtgaaacatgttccttattaaagaatataaacaaacctcggcaaatttcacagcttcagccatggcttcaaaagtgagaatggcaccacc |
15419604 |
T |
|
| Q |
201 |
atcatctgaaatatagcatgagaccttttcaatagaataat |
241 |
Q |
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||||||||||||||||||||||||||||||||||| ||||| |
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| T |
15419605 |
atcatctgaaatatagcatgagaccttttcaataggataat |
15419645 |
T |
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