View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19687_high_6 (Length: 553)
Name: NF19687_high_6
Description: NF19687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19687_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 454; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 1 - 534
Target Start/End: Original strand, 26599406 - 26599937
Alignment:
| Q |
1 |
tctggtaccagtcgtgacagagaaaagtctaaccagaatggaagtgttggcaggtgttggagtcatgtcctcaatgcgttagaggcaaaagagnnnnnnn |
100 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26599406 |
tctggtaccagtcgtgacacagaaaagtctaaccagaatggaagtgttggcaggtgttggagtcatgtcctcaatgcgttagaggcaaaagagaaaaaaa |
26599505 |
T |
|
| Q |
101 |
nntacatttagaaactggaatgaagtgtttgacacgcgccatgagtgtcggtcagtcaaacacaccttcaacatgaaatatcagttactgctaatagcac |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26599506 |
a-tacatttagaaactggaatggagtgtttgacacgcgccatgagtgtcggtcagtcaaacacaccttcaacatgaaatatcagttactgctaatagcac |
26599604 |
T |
|
| Q |
201 |
atcataggattctcatcaaaagtcatatgaaattggcattgccatatcgctttatcctttgacagaaccattttaaagttatccatagatcaaaggatgt |
300 |
Q |
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||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
26599605 |
atcataggattctcatcaaaagtcacatgaaattggcatt-ccatatcgctttatcctttgactgaaccattttaaagttatccatagatcaaaggatgt |
26599703 |
T |
|
| Q |
301 |
cacaggctgatgacaaaaattaaagaggagatacgaaatacacttttactcccaaatatactatgacactattaagtcttagaaaattgcacatttacac |
400 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
26599704 |
cacaggctgataacaaaaattaaagaggagatacgaaatacactgttactcccaaatatactatgacgctattaagtcttagaaaattgcacatttacac |
26599803 |
T |
|
| Q |
401 |
tataaacatgacaaagtaaacagtaattcaagaatctacagaaaagtatcaaaaacagaacacagtgccattccaattgctgttattatttatgatttcg |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |
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| T |
26599804 |
tataaacatgacaaagtaaacagtaattcaagaatctacagaaaagcatcaaaaacagaacacagtgccattcccatttctgttattatttatgatttcg |
26599903 |
T |
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| Q |
501 |
gaactacccactgattttagtcactataggaatg |
534 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
26599904 |
gaactacccactgattttagtcactataggaatg |
26599937 |
T |
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