View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19687_high_64 (Length: 236)
Name: NF19687_high_64
Description: NF19687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19687_high_64 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 44379165 - 44379386
Alignment:
| Q |
1 |
tagcaaggtctacacacagggaatgcacattcattgcaagcaacaaaaggttcatcatccactgtaaactctatctcatccctacagatctggcaaattt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
44379165 |
tagcaaggtctacacacagggaatgcacattcattgcaagcaacaaaaggttcatcatccactgtaaactctatctcatccccacagatctggcaaattt |
44379264 |
T |
|
| Q |
101 |
gtccactcaattctgtcacagcattcacctgcatttgataagaacaataaatgttacatgcacacatgagacagtacattattttcactatgcaaattat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44379265 |
gtccactcaattctgtcacagcattcacctgcatttgataagaacaataaatgttacatgcacacatgagacagtacattattttcactatgcaaattat |
44379364 |
T |
|
| Q |
201 |
gcagcttcaaagtgaaaaacct |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
44379365 |
gcagcttcaaagtgaaaaacct |
44379386 |
T |
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