View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19687_low_15 (Length: 467)
Name: NF19687_low_15
Description: NF19687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19687_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 1 - 449
Target Start/End: Complemental strand, 30415805 - 30415357
Alignment:
| Q |
1 |
acaaatgctataagagtaaccctgcatccaagagcaggaacttcatctcttccacaactatatgaagctgaaattgttataaactcccatttaccttggg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415805 |
acaaatgctataagagtaaccctgcatccaagagcaggaacttcatctcttccacaactatatgaagctgaaattgttataaactcccatttaccttggg |
30415706 |
T |
|
| Q |
101 |
ctaaagagttaattcgaaattggaagtggactttttatgtttgggtgtcattatatgtgtacattgtgctacttatgcttctcttatattgttacaggcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
30415705 |
ctaaagagttaattcgaaattggaagtggactttctatgtttgggtgtcattatatgtgtacatcgtgctacttatgcttctcttatattgttacaggcc |
30415606 |
T |
|
| Q |
201 |
actcatctttcttgtcacacaagaaacttttagtgagcaaagggtgagggaagtgataagtgaagaacataatgacttacaagttggagatttatcagga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
30415605 |
actcatctttcttgtcacacaagaaacttttagtgagcaaagggtgagggaagtgataagtgaagaacataaagacttacaagttggagatttatcagga |
30415506 |
T |
|
| Q |
301 |
gatgagagtgaggtttctgagttgttgaggaaatggagacttagcagaagcaagagaaagacgatcctgacacatggtagtgttggtgtgccagaagcaa |
400 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415505 |
gatgagagtgaagtttctgagttgttgaggaaatggagacttagcagaagcaagagaaagacgatcctgacacatggtagtgttggtgtgccagaagcaa |
30415406 |
T |
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| Q |
401 |
ttggcgaggcttctagtattagcatgacgactactagagaagatgtaac |
449 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30415405 |
ttggcgaggcttctagtattagcatgacgactactagagaagatgtaac |
30415357 |
T |
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