View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19687_low_73 (Length: 210)

Name: NF19687_low_73
Description: NF19687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19687_low_73
NF19687_low_73
[»] chr2 (39 HSPs)
chr2 (74-196)||(2294825-2294947)
chr2 (1-73)||(36168946-36169018)
chr2 (1-73)||(40613820-40613892)
chr2 (5-73)||(2533237-2533305)
chr2 (5-73)||(20700929-20700997)
chr2 (74-137)||(2304667-2304730)
chr2 (143-196)||(2310704-2310757)
chr2 (5-69)||(7465657-7465721)
chr2 (5-69)||(13438457-13438521)
chr2 (5-69)||(17473134-17473198)
chr2 (5-69)||(28381577-28381641)
chr2 (5-69)||(28863569-28863633)
chr2 (1-73)||(38273061-38273132)
chr2 (8-69)||(5574422-5574483)
chr2 (8-69)||(10249304-10249365)
chr2 (5-69)||(4060799-4060863)
chr2 (5-61)||(9058594-9058650)
chr2 (5-73)||(17823902-17823970)
chr2 (5-69)||(19930742-19930806)
chr2 (5-73)||(42257307-42257375)
chr2 (5-72)||(44152041-44152108)
chr2 (5-71)||(41758701-41758767)
chr2 (8-69)||(38882733-38882794)
chr2 (5-69)||(32505570-32505634)
chr2 (5-69)||(40701592-40701656)
chr2 (5-62)||(33436029-33436086)
chr2 (25-73)||(3440113-3440161)
chr2 (5-73)||(13365467-13365535)
chr2 (5-69)||(30915577-30915641)
chr2 (5-73)||(43490235-43490303)
chr2 (8-57)||(27864808-27864857)
chr2 (5-71)||(21301420-21301486)
chr2 (5-70)||(2997408-2997473)
chr2 (25-73)||(1750414-1750462)
chr2 (5-73)||(3034901-3034969)
chr2 (25-73)||(3738077-3738125)
chr2 (5-73)||(26891422-26891490)
chr2 (5-73)||(38732468-38732536)
chr2 (5-73)||(45097653-45097721)
[»] chr5 (27 HSPs)
chr5 (5-74)||(15409527-15409596)
chr5 (5-69)||(2740388-2740452)
chr5 (5-69)||(14831928-14831992)
chr5 (5-73)||(31009102-31009170)
chr5 (5-73)||(2252086-2252154)
chr5 (5-73)||(3921183-3921251)
chr5 (5-73)||(26720630-26720698)
chr5 (5-73)||(26990379-26990447)
chr5 (5-69)||(33149560-33149624)
chr5 (5-69)||(35785313-35785377)
chr5 (5-57)||(36732876-36732928)
chr5 (5-72)||(6679812-6679879)
chr5 (5-69)||(18520806-18520870)
chr5 (5-69)||(31132448-31132512)
chr5 (5-64)||(13811766-13811825)
chr5 (8-71)||(35943812-35943875)
chr5 (5-73)||(6259919-6259987)
chr5 (5-69)||(40145521-40145585)
chr5 (5-72)||(33825243-33825310)
chr5 (28-73)||(21370141-21370186)
chr5 (12-73)||(33855082-33855143)
chr5 (5-73)||(2177478-2177546)
chr5 (5-73)||(39688815-39688883)
chr5 (5-73)||(16328015-16328083)
chr5 (25-73)||(18033982-18034030)
chr5 (5-70)||(36875537-36875598)
chr5 (45-73)||(38470579-38470607)
[»] chr7 (33 HSPs)
chr7 (5-73)||(35522990-35523058)
chr7 (8-73)||(46374742-46374807)
chr7 (5-69)||(19329956-19330020)
chr7 (5-73)||(31735991-31736059)
chr7 (5-73)||(41423796-41423864)
chr7 (5-73)||(46033719-46033787)
chr7 (5-72)||(16374743-16374810)
chr7 (7-73)||(21234517-21234583)
chr7 (5-69)||(3434666-3434730)
chr7 (5-69)||(8080305-8080369)
chr7 (5-69)||(4999436-4999500)
chr7 (5-69)||(38837331-38837395)
chr7 (5-71)||(41915855-41915921)
chr7 (8-64)||(19436114-19436170)
chr7 (5-73)||(26296758-26296826)
chr7 (5-73)||(27744227-27744295)
chr7 (5-69)||(32951415-32951479)
chr7 (5-69)||(40957821-40957885)
chr7 (5-71)||(7728020-7728086)
chr7 (8-69)||(36362131-36362192)
chr7 (8-73)||(38044314-38044379)
chr7 (1-69)||(7389499-7389566)
chr7 (5-73)||(8238327-8238395)
chr7 (5-73)||(22343475-22343543)
chr7 (6-72)||(2318160-2318226)
chr7 (28-73)||(12311041-12311086)
chr7 (8-69)||(36361847-36361908)
chr7 (5-53)||(3784109-3784157)
chr7 (5-69)||(11044292-11044356)
chr7 (28-71)||(39255844-39255887)
chr7 (5-71)||(18207293-18207359)
chr7 (5-43)||(35137647-35137685)
chr7 (5-73)||(35468773-35468841)
[»] chr3 (38 HSPs)
chr3 (1-73)||(51419278-51419350)
chr3 (1-73)||(47531975-47532047)
chr3 (5-76)||(11347837-11347908)
chr3 (5-73)||(20764833-20764901)
chr3 (8-73)||(26141448-26141513)
chr3 (8-69)||(31456806-31456867)
chr3 (5-69)||(33644314-33644378)
chr3 (5-73)||(41189682-41189750)
chr3 (5-69)||(53982125-53982189)
chr3 (5-73)||(30801651-30801719)
chr3 (5-73)||(33118768-33118836)
chr3 (5-73)||(35536740-35536808)
chr3 (5-69)||(48587023-48587087)
chr3 (8-69)||(11095289-11095350)
chr3 (8-69)||(49607531-49607592)
chr3 (5-73)||(8076507-8076575)
chr3 (5-69)||(52629414-52629478)
chr3 (5-69)||(54868817-54868881)
chr3 (5-71)||(43746453-43746519)
chr3 (5-74)||(36331246-36331315)
chr3 (5-69)||(9563113-9563177)
chr3 (5-73)||(26754809-26754877)
chr3 (26-74)||(35965699-35965747)
chr3 (5-69)||(36707350-36707414)
chr3 (5-73)||(42823225-42823293)
chr3 (5-73)||(45058471-45058539)
chr3 (5-71)||(48375626-48375692)
chr3 (5-73)||(8956876-8956944)
chr3 (5-73)||(14623757-14623825)
chr3 (5-69)||(27714825-27714889)
chr3 (5-71)||(1758379-1758442)
chr3 (5-71)||(13897975-13898041)
chr3 (35-80)||(11140954-11140999)
chr3 (5-69)||(17470519-17470583)
chr3 (5-73)||(21746106-21746174)
chr3 (5-73)||(35093699-35093767)
chr3 (45-73)||(45127000-45127028)
chr3 (25-73)||(54246200-54246248)
[»] chr8 (30 HSPs)
chr8 (5-73)||(43414499-43414567)
chr8 (5-73)||(15048099-15048167)
chr8 (5-73)||(37038593-37038661)
chr8 (5-57)||(42710228-42710280)
chr8 (5-72)||(5957944-5958011)
chr8 (5-69)||(504043-504107)
chr8 (5-69)||(14548036-14548100)
chr8 (5-69)||(23122519-23122583)
chr8 (5-73)||(4854781-4854849)
chr8 (5-69)||(12831161-12831225)
chr8 (5-69)||(34012218-34012282)
chr8 (5-73)||(42354506-42354574)
chr8 (5-76)||(10284546-10284617)
chr8 (5-70)||(40423864-40423929)
chr8 (5-73)||(8841350-8841418)
chr8 (5-69)||(9122299-9122363)
chr8 (5-73)||(32707921-32707989)
chr8 (5-69)||(34307330-34307394)
chr8 (5-73)||(42221629-42221697)
chr8 (5-51)||(44507027-44507073)
chr8 (5-70)||(16056322-16056387)
chr8 (5-53)||(1179878-1179926)
chr8 (5-69)||(24307715-24307779)
chr8 (5-73)||(32032838-32032906)
chr8 (5-72)||(25838303-25838370)
chr8 (8-69)||(15197450-15197511)
chr8 (5-73)||(15258847-15258915)
chr8 (5-73)||(30183794-30183862)
chr8 (5-69)||(30479396-30479460)
chr8 (5-73)||(40467814-40467882)
[»] chr1 (31 HSPs)
chr1 (5-73)||(32813361-32813429)
chr1 (5-69)||(27564657-27564721)
chr1 (5-69)||(37649312-37649376)
chr1 (5-69)||(48716204-48716268)
chr1 (5-73)||(51898601-51898669)
chr1 (5-71)||(49811447-49811513)
chr1 (5-73)||(26440838-26440906)
chr1 (5-57)||(38632255-38632307)
chr1 (5-69)||(41758919-41758983)
chr1 (5-73)||(45044478-45044546)
chr1 (5-73)||(37926356-37926424)
chr1 (5-69)||(2582029-2582093)
chr1 (5-69)||(3000433-3000497)
chr1 (5-73)||(3302451-3302519)
chr1 (5-69)||(9474798-9474862)
chr1 (5-69)||(26274543-26274607)
chr1 (5-69)||(38595268-38595332)
chr1 (5-73)||(41608411-41608479)
chr1 (5-69)||(47452242-47452306)
chr1 (5-62)||(50630572-50630629)
chr1 (5-73)||(5958918-5958986)
chr1 (5-73)||(47748556-47748624)
chr1 (5-73)||(50590918-50590986)
chr1 (5-73)||(44454093-44454165)
chr1 (8-69)||(8346309-8346370)
chr1 (5-73)||(6260984-6261052)
chr1 (5-73)||(11152296-11152364)
chr1 (6-69)||(43247-43310)
chr1 (16-73)||(35003294-35003351)
chr1 (45-74)||(37814777-37814806)
chr1 (5-73)||(44332289-44332357)
[»] chr6 (20 HSPs)
chr6 (5-73)||(31976362-31976430)
chr6 (5-73)||(31110679-31110747)
chr6 (5-69)||(11427732-11427796)
chr6 (5-69)||(29857941-29858005)
chr6 (5-69)||(32869792-32869856)
chr6 (5-73)||(15989960-15990028)
chr6 (5-69)||(17598668-17598732)
chr6 (5-69)||(22880580-22880644)
chr6 (5-73)||(30341278-30341346)
chr6 (5-73)||(4231662-4231730)
chr6 (5-73)||(15507942-15508010)
chr6 (5-57)||(15832691-15832743)
chr6 (5-73)||(31952948-31953016)
chr6 (27-73)||(22421997-22422043)
chr6 (8-51)||(23128067-23128110)
chr6 (22-73)||(26466799-26466850)
chr6 (9-71)||(28536408-28536470)
chr6 (45-73)||(3213400-3213428)
chr6 (5-69)||(6209388-6209451)
chr6 (45-73)||(21293749-21293777)
[»] scaffold1268 (1 HSPs)
scaffold1268 (5-72)||(848-915)
[»] scaffold1267 (1 HSPs)
scaffold1267 (5-72)||(848-915)
[»] chr4 (31 HSPs)
chr4 (5-73)||(29240000-29240068)
chr4 (5-73)||(31910306-31910374)
chr4 (5-69)||(41236461-41236525)
chr4 (5-73)||(50526089-50526157)
chr4 (5-71)||(40574893-40574959)
chr4 (5-69)||(6034158-6034222)
chr4 (5-69)||(24995029-24995093)
chr4 (5-73)||(41823996-41824064)
chr4 (5-69)||(42044289-42044353)
chr4 (5-69)||(48182971-48183035)
chr4 (5-73)||(50052346-50052414)
chr4 (5-69)||(54473455-54473519)
chr4 (5-73)||(19670634-19670702)
chr4 (5-73)||(29547877-29547945)
chr4 (5-73)||(55475305-55475373)
chr4 (5-69)||(23608349-23608413)
chr4 (11-71)||(43487823-43487883)
chr4 (5-56)||(480382-480433)
chr4 (5-73)||(18924413-18924481)
chr4 (15-71)||(29978009-29978065)
chr4 (5-73)||(47986322-47986389)
chr4 (5-73)||(50813810-50813878)
chr4 (22-73)||(1771315-1771366)
chr4 (34-73)||(3481787-3481826)
chr4 (5-51)||(11511402-11511448)
chr4 (5-70)||(17983664-17983729)
chr4 (5-73)||(28480186-28480254)
chr4 (5-73)||(28481061-28481129)
chr4 (5-73)||(28481936-28482004)
chr4 (5-73)||(29589658-29589726)
chr4 (45-73)||(55966418-55966446)
[»] scaffold0237 (1 HSPs)
scaffold0237 (5-69)||(4143-4207)
[»] scaffold0110 (1 HSPs)
scaffold0110 (5-73)||(8781-8849)
[»] scaffold0321 (1 HSPs)
scaffold0321 (5-69)||(10031-10095)
[»] scaffold0316 (1 HSPs)
scaffold0316 (5-73)||(17217-17285)
[»] scaffold0018 (1 HSPs)
scaffold0018 (5-72)||(152612-152679)


Alignment Details
Target: chr2 (Bit Score: 111; Significance: 3e-56; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 74 - 196
Target Start/End: Original strand, 2294825 - 2294947
Alignment:
Q  74 caacacattgggaacttgaacagtttcacctttcatttgataggttaaattgaattcatacaaatactaatttctaattttttaatacttacaacaagta 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2294825 caacacattgggaacttgaacagtttcacctttcatttgataggttaaattgagttcatacaaatactaatttctaattttttaatacttacaacaagta 2294924  T
Q  174 tcctaaagacactctttaatatt 196  Q
    ||||||||| |||||||| ||||    
T  2294925 tcctaaagatactctttagtatt 2294947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 36168946 - 36169018
Alignment:
Q  1 cctattctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  36168946 cctattctctcttcctaatgtatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacattttcc 36169018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 40613892 - 40613820
Alignment:
Q  1 cctattctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40613892 cctattctttcttcataatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 40613820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 2533237 - 2533305
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  2533237 ttctctcttcccaatgtatggggtgtacaagggtgtatgggaataaagggtgtatatataacattttcc 2533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 20700929 - 20700997
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20700929 ttctctcttcctagtgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 20700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 2304667 - 2304730
Alignment:
Q  74 caacacattgggaacttgaacagtttcacctttcatttgataggttaaattgaattcatacaaa 137  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||    
T  2304667 caacacattgggaacttgaacaatttcacctttcatttgataggttaaattgagttcgtacaaa 2304730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 2310704 - 2310757
Alignment:
Q  143 atttctaattttttaatacttacaacaagtatcctaaagacactctttaatatt 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2310704 atttctaattttttaatacttacaacaagtatcctaaagacactctttagtatt 2310757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 7465721 - 7465657
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  7465721 ttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 7465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 13438457 - 13438521
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  13438457 ttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 17473134 - 17473198
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  17473134 ttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 28381641 - 28381577
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  28381641 ttctctcttcctaatatatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 28381577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 28863569 - 28863633
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  28863569 ttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38273132 - 38273061
Alignment:
Q  1 cctattctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||||| |||||||    
T  38273132 cctattctctcttcctaatgtatggggtgtacaa-gatgtatgagaataaatggtgtttatgtaatattttcc 38273061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 5574483 - 5574422
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||| ||||    
T  5574483 tctcttcctaatgcatggcgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 5574422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 10249365 - 10249304
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  10249365 tctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 4060799 - 4060863
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||| ||||    
T  4060799 ttctctcttcctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcatt 4060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 9058594 - 9058650
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttat 61  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||    
T  9058594 ttctctcttcctaatgcatggggtgtacaagagtgtatgggaataaagggtatttat 9058650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 17823902 - 17823970
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||| ||| |||||||||||||||||||||||  |||||||| ||| |||||||||||||||    
T  17823902 ttctctcttccaaatatatggggtgtacaagggtgtatgtaaataaaggatgtctatgtaacattttcc 17823970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 19930806 - 19930742
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||| ||||| |||||| ||||    
T  19930806 ttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 19930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42257307 - 42257375
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||| |||||||||||||||||||||||||| |||||| | |||||||||||| ||||||| |||||||    
T  42257307 ttctttcttcctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgtaatattttcc 42257375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 44152041 - 44152108
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    |||||||||||||||| ||| | | |||||||||||||| ||||||| ||||||||||||||||||||    
T  44152041 ttctctcttcctaatgcatgagatatacaagggtgtatgcgaataaaaggtgtttatgtaacattttc 44152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 41758701 - 41758767
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||||| |||||||||||||||| |||||| |||||||  |||| |||||||||||||    
T  41758701 ttctctcttcctaatatatggggtgtacaaggatgtatgagaataaaatgtgtctatgtaacatttt 41758767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 38882794 - 38882733
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| | |||||| ||||    
T  38882794 tctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtctctatgtatcatt 38882733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 32505634 - 32505570
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||| |||| |||||| ||||    
T  32505634 ttctctcttcttaatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcatt 32505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 40701592 - 40701656
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| ||||| |||||| ||||    
T  40701592 ttctctcttcctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 40701656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 33436086 - 33436029
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatg 62  Q
    |||||||||||||||| ||| |||||||||||||||||| ||||||| ||||| ||||    
T  33436086 ttctctcttcctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatg 33436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 3440113 - 3440161
Alignment:
Q  25 gggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  3440113 gggtgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcc 3440161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 13365467 - 13365535
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  |||||||||||||||||| |||  | |||| ||||| |||||||||||||||    
T  13365467 ttctctcttcctaatacatggggtgtacaagggtgaatgcaattaaaaggtgtctatgtaacattttcc 13365535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 30915577 - 30915641
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  ||||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  30915577 ttctctcttcctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 30915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 43490235 - 43490303
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  || |||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  43490235 ttctctcttcctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 43490303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 27864808 - 27864857
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgt 57  Q
    ||||||||||||  ||||| |||||||||||||||| |||||||||||||    
T  27864808 tctcttcctaatacatgggatgtacaagggtgtatgagaataaagggtgt 27864857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 21301486 - 21301420
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||| |||||||| || ||| |||||||| | |||||||| |||||||||||| ||| |||||||||    
T  21301486 ttctttcttcctagtgcatgaggtgtacatgagtgtatggaaataaagggtgtgtatctaacatttt 21301420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 2997473 - 2997408
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattt 70  Q
    |||||||||||||||  ||| ||||||||||||||||||  | ||||  |||| ||||||||||||    
T  2997473 ttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaagtgtctatgtaacattt 2997408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 1750462 - 1750414
Alignment:
Q  25 gggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| || || | ||||||||||||||| ||||||||||||||    
T  1750462 gggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1750414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 3034969 - 3034901
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| ||||||| | ||||||||  | |||| ||||| |||||||||||||||    
T  3034969 ttctctcttcctaatacatgaggtgtaccaaggtgtatgcaattaaaaggtgtctatgtaacattttcc 3034901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 3738077 - 3738125
Alignment:
Q  25 gggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| ||||||||  |||| ||||||| |||||||||||||||    
T  3738077 gggtgtacaaaggtgtatgaaaatatagggtgtctatgtaacattttcc 3738125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 26891490 - 26891422
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| ||  ||||||| ||  |||||||  ||| |||||||| |||||||||||||||    
T  26891490 ttctctcttcctaatatacagggtgtaaaaatgtgtatgaaaattaagggtgtatatgtaacattttcc 26891422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 38732468 - 38732536
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| | ||||||||| ||||||  | |||| ||||| |||||||||||||||    
T  38732468 ttctctcttcctaatacatgagatgtacaaggatgtatgcaattaaaaggtgtctatgtaacattttcc 38732536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 45097721 - 45097653
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  || || |||||||| |||||||  | |||| | |||||||||||||||||||    
T  45097721 ttctctcttcctaatacatcggatgtacaagagtgtatgcaattaaaagatgtttatgtaacattttcc 45097653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 15409596 - 15409527
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttccc 74  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15409596 ttctctcttcctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacattttccc 15409527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 2740388 - 2740452
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| ||||    
T  2740388 ttctctcttcctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcatt 2740452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 14831928 - 14831992
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  14831928 ttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31009102 - 31009170
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||||||||||||| |||||||| ||||||||||||| |||||||||||||||    
T  31009102 ttctctcttcctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtctatgtaacattttcc 31009170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 2252154 - 2252086
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  2252154 ttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 2252086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 3921251 - 3921183
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  3921251 ttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 3921183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26720630 - 26720698
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| | ||| ||| |||||||||||    
T  26720630 ttctctcttcctaatgtatggggtgtactagggtgtatgagaataaatgatgtctatataacattttcc 26720698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26990379 - 26990447
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||| |||||||||| ||||||| | ||| ||| |||||||||||    
T  26990379 ttctctcttcctaatgtatggggtgtactagggtgtatgagaataaatgatgtctatataacattttcc 26990447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 33149624 - 33149560
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||| ||||    
T  33149624 ttctctcttcctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatt 33149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 35785313 - 35785377
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  35785313 ttctctcttcctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 35785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 36732928 - 36732876
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgt 57  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  36732928 ttctctcttcctaatgcatgaggtgtacaagggtgtatgggaataaagggtgt 36732876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 6679812 - 6679879
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| | ||| ||||||||||||||    
T  6679812 ttctctcttcctaatgtatagggtgtacaagggtgtatgacaataaatgatgtctatgtaacattttc 6679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 18520870 - 18520806
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| ||||||||||||||||||  |||||||||||| |||||| ||||    
T  18520870 ttctctcttcctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 18520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 31132448 - 31132512
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||| |||||| ||| ||||||||||||||||||  ||||||||||||||||||| ||||    
T  31132448 ttctctctttctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtttatgtatcatt 31132512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 13811766 - 13811825
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgta 64  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||| ||||| ||||||    
T  13811766 ttctctcttcctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgta 13811825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 35943875 - 35943812
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||||||||| || ||||||||||||||||||||||| ||||||  |||| |||||||||||||    
T  35943875 tctcttcctagtgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatttt 35943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 6259987 - 6259919
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||  |||||||||||| |||||||| |||||| |||||||||| | | |||||||||||||||    
T  6259987 ttctctctcactaatgtatgggatgtacaagtgtgtataggaataaaggatatctatgtaacattttcc 6259919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 40145521 - 40145585
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| | | ||||||||||||| |||| ||||||||||||| |||||| ||||    
T  40145521 ttctctcttcctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcatt 40145585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 33825310 - 33825243
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||||||| || |||||||||| |||| |||||| ||||||| |||||  |||||||||||||    
T  33825310 ttctctcttcctagtgcatggggtgtagaaggctgtatgagaataaatggtgtcaatgtaacattttc 33825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 21370141 - 21370186
Alignment:
Q  28 tgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  21370141 tgtacaaaggtgtatgaaaataaagggtgtttatgtaacattttcc 21370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 33855082 - 33855143
Alignment:
Q  12 ttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||  ||||||||||||| || || | ||||||||||||||| ||||||||||||||    
T  33855082 ttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 33855143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 2177478 - 2177546
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || || || |||||||||||||||| |||||||  |||| | |||||||||||||    
T  2177478 ttctctcttcctagtgcattggatgtacaagggtgtatgagaataaaatgtgtctctgtaacattttcc 2177546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 39688883 - 39688815
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  || |||||||||| ||||||||  | |||| ||||| |||||||||||||||    
T  39688883 ttctctcttcctaatacatagggtgtacaaaggtgtatgcaattaaaaggtgtctatgtaacattttcc 39688815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 16328015 - 16328083
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||| |||||| ||||||||||| ||  || ||||  |||||| ||||||||| |||||||||||    
T  16328015 ttctctctccctaatatatggggtgtagaaaagtatatgaaaataaatggtgtttatctaacattttcc 16328083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 18034030 - 18033982
Alignment:
Q  25 gggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| || || | ||||||||||||||| ||||||||||||||    
T  18034030 gggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttcc 18033982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 36875598 - 36875537
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattt 70  Q
    |||||||||||||||  ||||||||||||||||    ||| |||||| ||||| ||||||||||||    
T  36875598 ttctctcttcctaatacatggggtgtacaaggg----tggaaataaatggtgtctatgtaacattt 36875537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 38470607 - 38470579
Alignment:
Q  45 gaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||    
T  38470607 gaataaagggtgtttatgtaacattttcc 38470579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 9e-29; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 35522990 - 35523058
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  35522990 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacattttcc 35523058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 46374807 - 46374742
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  46374807 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcc 46374742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 19329956 - 19330020
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  19329956 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 19330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31735991 - 31736059
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| |||||||||||    
T  31735991 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctatctaacattttcc 31736059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41423796 - 41423864
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  41423796 ttctctcttcctagtgcatggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacattttcc 41423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 46033787 - 46033719
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  46033787 ttctctattcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 46033719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 16374810 - 16374743
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||    
T  16374810 ttctctcttcctaatgtatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacattttc 16374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 21234517 - 21234583
Alignment:
Q  7 ctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||||||||||||    
T  21234517 ctctcttcctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacattttcc 21234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 3434666 - 3434730
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  3434666 ttctctcttcctaatgcatggggtgtacaaggctgtatgggaataaagggtgtctatgtatcatt 3434730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 8080369 - 8080305
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  8080369 ttctctcttcctattgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 8080305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 4999500 - 4999436
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  4999500 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 4999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 38837331 - 38837395
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||| ||||    
T  38837331 ttctctcttcctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatt 38837395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 41915855 - 41915921
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||||||||||||    
T  41915855 ttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatttt 41915921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 19436170 - 19436114
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgta 64  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||    
T  19436170 tctcttcctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26296758 - 26296826
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| ||||||||| ||||||||||||||||||| |||| | ||||| || ||||||||||||    
T  26296758 ttctctcttcttaatgtatgaggtgtacaagggtgtatggaaatatatggtgtctacgtaacattttcc 26296826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 27744295 - 27744227
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||||| ||||||||| | |||||||||||| ||||||||| |||||||||||    
T  27744295 ttctctcttcctagtgcatgggatgtacaaggatatatgggaataaatggtgtttatataacattttcc 27744227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 32951479 - 32951415
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  |||||||||||||||||||||| |||||| |||||| |||||| ||||    
T  32951479 ttctctcttcctaatacatggggtgtacaagggtgtatgagaataaggggtgtctatgtatcatt 32951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 40957821 - 40957885
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||| |||||| |||||| ||||    
T  40957821 ttctctcttcctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcatt 40957885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 7728020 - 7728086
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||||| |||||||||||||||| ||||||  | |||| ||||| |||||||||||||    
T  7728020 ttctctcttcctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacatttt 7728086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 36362131 - 36362192
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||  ||||| |||||||||||||||| ||||||||||||| |||||| ||||    
T  36362131 tctcttcctaatacatgggatgtacaagggtgtatgagaataaagggtgtctatgtatcatt 36362192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 38044314 - 38044379
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  38044314 tctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 38044379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7389499 - 7389566
Alignment:
Q  1 cctattctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||| ||||||||||||||  |||||||||||| ||||||||||||||||||| ||| |||||| ||||    
T  7389499 cctactctctcttcctaatacatggggtgtaca-gggtgtatgggaataaaggatgtctatgtatcatt 7389566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 8238327 - 8238395
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| || || |||||||||||||||    
T  8238327 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggcgtctatgtaacattttcc 8238395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 22343475 - 22343543
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| ||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  22343475 ttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 22343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 72
Target Start/End: Complemental strand, 2318226 - 2318160
Alignment:
Q  6 tctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    |||||||  |||||| |||| |||||||| ||||||||| ||||||| |||| ||||||||||||||    
T  2318226 tctctctctctaatgcatggagtgtacaaaggtgtatggaaataaagtgtgtctatgtaacattttc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 12311041 - 12311086
Alignment:
Q  28 tgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||    
T  12311041 tgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcc 12311086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 36361908 - 36361847
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||  ||||  |||||||||||||||| ||||||||||||| |||||| ||||    
T  36361908 tctcttcctaatacatggaatgtacaagggtgtatgagaataaagggtgtctatgtatcatt 36361847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 3784109 - 3784157
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagg 53  Q
    |||||||||||||||| ||||||||||||||  |||||| |||||||||    
T  3784109 ttctctcttcctaatgcatggggtgtacaagaatgtatgtgaataaagg 3784157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 11044292 - 11044356
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| ||||||||| ||||||||  ||||||| |||| |||||| ||||    
T  11044292 ttctctcttcctaatgcatgaggtgtacaaaggtgtatgaaaataaagagtgtctatgtatcatt 11044356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 39255887 - 39255844
Alignment:
Q  28 tgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||||||  |||||||||||| |||||||||||||    
T  39255887 tgtacaagggtgtatgataataaagggtgtctatgtaacatttt 39255844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 18207293 - 18207359
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||| || || | |||||||||||||||||  |||||||||| | ||| |||||||||    
T  18207293 ttctctcttcctagtggatagagtgtacaagggtgtatgataataaagggtatctatctaacatttt 18207359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 35137647 - 35137685
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatg 43  Q
    |||||||||||||||| ||||| ||||||||||||||||    
T  35137647 ttctctcttcctaatgcatgggatgtacaagggtgtatg 35137685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 35468841 - 35468773
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| |  ||| | |||| |||| |||||| ||||||| ||||| |||||||||||||||    
T  35468841 ttctctcttcctagttcatgagatgtataaggatgtatgagaataaaaggtgtatatgtaacattttcc 35468773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 9e-29; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 51419350 - 51419278
Alignment:
Q  1 cctattctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  51419350 cctattctctcttcctaatgtatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacattttcc 51419278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 47531975 - 47532047
Alignment:
Q  1 cctattctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||    
T  47531975 cctattctctcttcctaatgtatggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacattttcc 47532047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 11347908 - 11347837
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcccaa 76  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  11347908 ttctctcttcctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccattttcccaa 11347837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 20764901 - 20764833
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  20764901 ttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 20764833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 26141513 - 26141448
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||    
T  26141513 tctcttcctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacattttcc 26141448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 31456806 - 31456867
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  31456806 tctcttcctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcatt 31456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 33644314 - 33644378
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||| ||||    
T  33644314 ttctctcttcctaatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcatt 33644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 41189750 - 41189682
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||| |||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||||    
T  41189750 ttctttcttcctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacattttcc 41189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 53982125 - 53982189
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  53982125 ttctctcttcctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 30801719 - 30801651
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| |  |||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  30801719 ttctctcttcctagtacatggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcc 30801651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 33118836 - 33118768
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||| |||| || ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  33118836 ttctctctccctagtgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacattttcc 33118768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 35536740 - 35536808
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |||||||||| ||||||||||| ||||||| ||||| |||||||||||||||    
T  35536740 ttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttcc 35536808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 48587087 - 48587023
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||||| ||||    
T  48587087 ttctctcttcctaatgcatgggatgtacaagggtatatgggaataaagggtgtctatgtatcatt 48587023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 11095350 - 11095289
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||||||| |||||| ||||    
T  11095350 tctcttcctaatgcatcgggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11095289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 49607531 - 49607592
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||| |||||| ||||    
T  49607531 tctcttcctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 49607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 8076507 - 8076575
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |||||||||||||  ||||||| ||||||| ||||| |||||||||||||||    
T  8076507 ttctctcttcctagtgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacattttcc 8076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 52629414 - 52629478
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||| |||||| |||||| ||||    
T  52629414 ttctctcttcctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcatt 52629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 54868881 - 54868817
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| || |||||||||||||||||||| |||||| ||||| |||||| ||||    
T  54868881 ttctctcttcctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 54868817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 43746453 - 43746519
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||| |||||||| || ||| ||||||||||||||||||  || |||||||||||||||||||||||    
T  43746453 ttctttcttcctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacatttt 43746519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 36331315 - 36331246
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttccc 74  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| | ||| ||||||||||||||||    
T  36331315 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaagatgtatatgtaacattttccc 36331246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 9563113 - 9563177
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| | ||||||| |||||||||||||||||||| | |||||| ||||    
T  9563113 ttctctcttcctaatgcatgagttgtacaaaggtgtatgggaataaagggtatctatgtatcatt 9563177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26754809 - 26754877
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||   ||| |||||||||| ||||||||| ||||||| |||| |||||||||||||||    
T  26754809 ttctctcttcctagaatatagggtgtacaaaggtgtatggaaataaagagtgtctatgtaacattttcc 26754877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 35965747 - 35965699
Alignment:
Q  26 ggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttccc 74  Q
    |||||||||||||||||| ||||||| ||||| ||||||||||||||||    
T  35965747 ggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttccc 35965699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 36707414 - 36707350
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| ||||||||||  |||||||||||||| ||||| |||||| ||||    
T  36707414 ttctctcttcctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatt 36707350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42823225 - 42823293
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| ||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  42823225 ttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 42823293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 45058539 - 45058471
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||| ||||||||  | |||| ||||| |||||||||||||||    
T  45058539 ttctctcttcctaatacatggggtgtacaatggtgtatgcaattaaaaggtgtctatgtaacattttcc 45058471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 48375692 - 48375626
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||||||||||||   ||| |||||||||| | ||||||| |||||||||||| |||||||||||||    
T  48375692 ttctctcttcctagaatatagggtgtacaaagatgtatggaaataaagggtgtctatgtaacatttt 48375626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 8956876 - 8956944
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |  ||||||| ||||||||||| ||||||| | ||| |||||||||||||||    
T  8956876 ttctctcttcctagtgcacagggtgtagaagggtgtatgagaataaatgctgtctatgtaacattttcc 8956944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 14623825 - 14623757
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||| ||| || ||| |||||| |||| |||||| ||||||| ||||| |||||||||||||||    
T  14623825 ttctctctttctagtgcatgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 14623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 27714889 - 27714825
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||| |||  |||||||||||||||||||| | |||||||| |||| |||||| ||||    
T  27714889 ttctctcttcccaatacatggggtgtacaagggtgtacgagaataaagagtgtatatgtatcatt 27714825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 1758442 - 1758379
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||||||||||||||| ||||| ||||||| ||||||||  ||||||  ||||||||||||||||||    
T  1758442 ttctctcttcctaatgcatggg-tgtacaaaggtgtatg--aataaacagtgtttatgtaacatttt 1758379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 13898041 - 13897975
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||||||| |||| ||||||||||||| ||  ||||||| ||||||| ||||| ||| |||||||||    
T  13898041 ttctctctccctagtgtatggggtgtagaaaagtgtatgagaataaatggtgtctatctaacatttt 13897975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 11140999 - 11140954
Alignment:
Q  35 gggtgtatgggaataaagggtgtttatgtaacattttcccaacaca 80  Q
    ||||||||| || |||||||||| ||||||||||||||| ||||||    
T  11140999 gggtgtatgagactaaagggtgtctatgtaacattttccaaacaca 11140954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 17470519 - 17470583
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| |||||||   |||||| ||||||| ||||| |||||| ||||    
T  17470519 ttctctcttcctaatgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcatt 17470583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 21746174 - 21746106
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||| ||| |||| ||||||||||||||||||  |||||| | |||  |||||| |||||||    
T  21746174 ttctctcttccaaatatatgaggtgtacaagggtgtatgtaaataaatgatgtccatgtaatattttcc 21746106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 35093699 - 35093767
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||| | ||||||| |||||||| ||||||| | ||| || ||||||||||||    
T  35093699 ttctctcttcctagtgcatgagatgtacaaaggtgtatgagaataaatgatgtctaggtaacattttcc 35093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 45127000 - 45127028
Alignment:
Q  45 gaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||    
T  45127000 gaataaagggtgtttatgtaacattttcc 45127028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 54246200 - 54246248
Alignment:
Q  25 gggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| || || | ||||||||||||||| ||||||||||||||    
T  54246200 gggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 54246248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 2e-26; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 43414567 - 43414499
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  43414567 ttctctcttcctaatgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacattttcc 43414499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15048167 - 15048099
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||||||||    
T  15048167 ttctctcttcctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctatataacattttcc 15048099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 37038593 - 37038661
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  37038593 ttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 42710280 - 42710228
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgt 57  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42710280 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgt 42710228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 5957944 - 5958011
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||||||| || ||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  5957944 ttctctcttcctagtgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacattttc 5958011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 504107 - 504043
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  504107 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 14548036 - 14548100
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  14548036 ttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14548100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 23122583 - 23122519
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  23122583 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 4854849 - 4854781
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||||||| |||| |||||||||||||||    
T  4854849 ttctctcttactaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacattttcc 4854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 12831161 - 12831225
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  12831161 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 34012282 - 34012218
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||| | ||||||||||||| |||||| ||||    
T  34012282 ttctctcttcctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatt 34012218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 42354574 - 42354506
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |||||||||| ||||||||||| ||||||| ||||| |||||||||||||||    
T  42354574 ttctctcttcctagtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttcc 42354506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 10284617 - 10284546
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcccaa 76  Q
    ||||||||||||| || ||||||||||||||| |||||  ||||||| ||||| ||||||||||||||||||    
T  10284617 ttctctcttcctagtgcatggggtgtacaaggttgtataagaataaaaggtgtctatgtaacattttcccaa 10284546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 40423929 - 40423864
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattt 70  Q
    |||||||||||||||  ||| |||||||||||||||||||||||||| ||||| |||||| |||||    
T  40423929 ttctctcttcctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattt 40423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 8841418 - 8841350
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||| |||||| || |||||||||||||| ||||||| ||||||| ||||| |||||||||||||||    
T  8841418 ttctcttttcctagtgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacattttcc 8841350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 9122299 - 9122363
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||  ||| |||||| ||||    
T  9122299 ttctctcttcctaatgcatggggtgtacaagagtgtatgggaataaagaatgtctatgtatcatt 9122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 32707989 - 32707921
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  32707989 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 32707921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 34307330 - 34307394
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||||||||||    
T  34307330 ttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 34307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42221629 - 42221697
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||| ||| ||| |||||||||||||||||||  |||||||| ||||||| |||||||||||    
T  42221629 ttctctcttccaaatatatagggtgtacaagggtgtatgtaaataaaggatgtttatataacattttcc 42221697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 44507073 - 44507027
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaa 51  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||    
T  44507073 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaa 44507027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 16056387 - 16056322
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattt 70  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| ||||||||||||    
T  16056387 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattt 16056322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 1179926 - 1179878
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagg 53  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  1179926 ttctctcttcctaatgcatggggtgtacaaggatatatgggaataaagg 1179878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 24307779 - 24307715
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||    
T  24307779 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 24307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 32032838 - 32032906
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| ||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  32032838 ttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 32032906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 25838303 - 25838370
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    |||||| || ||||||||| |||||||||||| ||||||| |||||||| | | ||||||||||||||    
T  25838303 ttctcttttgctaatgtatagggtgtacaaggttgtatggcaataaaggatatctatgtaacattttc 25838370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 15197450 - 15197511
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||  |||| |||||| ||||    
T  15197450 tctcttccaaatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcatt 15197511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15258915 - 15258847
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||   ||| || |||||||  |||||||| |||||||||||| |||||||||||||||    
T  15258915 ttctctcttcctagaatataggatgtacaaaagtgtatggaaataaagggtgtctatgtaacattttcc 15258847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 30183862 - 30183794
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||| |||||| ||| ||||||||||||||| |||||||  |||||||| ||| ||| |||||||||||    
T  30183862 ttctttcttccaaatatatggggtgtacaagagtgtatgtaaataaaggatgtctatctaacattttcc 30183794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 30479460 - 30479396
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  ||| ||||||||||||||||||  | |||| ||||| |||||||||||    
T  30479460 ttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 30479396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 40467814 - 40467882
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| | ||||||||||||||   | |||||| ||||| ||||| |||||||||||||||    
T  40467814 ttctctcttcctagtctatggggtgtacaaaaatttatggggataaaaggtgtctatgtaacattttcc 40467882  T

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Target: chr1 (Bit Score: 61; Significance: 2e-26; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 32813361 - 32813429
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  32813361 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcc 32813429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 27564721 - 27564657
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  27564721 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 27564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 37649312 - 37649376
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  37649312 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 48716268 - 48716204
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  48716268 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 51898669 - 51898601
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  51898669 ttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

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Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 49811513 - 49811447
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||||    
T  49811513 ttctctcttcctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatttt 49811447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26440838 - 26440906
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| ||||||||||  ||||||||||||||| |||||||||| |||||||||||||||||||    
T  26440838 ttctctcttcgtaatgtatggaatgtacaagggtgtataggaataaaggatgtttatgtaacattttcc 26440906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 38632307 - 38632255
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgt 57  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  38632307 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgt 38632255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41758919 - 41758983
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  41758919 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 45044546 - 45044478
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| | ||| || ||||||||||||    
T  45044546 ttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacattttcc 45044478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 37926424 - 37926356
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||| ||| |||||||    
T  37926424 ttctctcttcctaatgtatggggtgtacaaggatgtatgtgaataaatggtgtctatataatattttcc 37926356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 2582029 - 2582093
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  ||| |||||||||||||||||  |||||||||||||||||||| ||||    
T  2582029 ttctctcttcctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcatt 2582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 3000433 - 3000497
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  3000433 ttctctcttcctaatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 3000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 3302519 - 3302451
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||| ||| ||| |||||||||||||||||||  |||||||| ||||||| |||||||||||    
T  3302519 ttctctcttccaaatatatagggtgtacaagggtgtatgttaataaaggatgtttatataacattttcc 3302451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 9474862 - 9474798
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||| |||| |||||| ||||    
T  9474862 ttctctcttcctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcatt 9474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 26274543 - 26274607
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| | || ||||||||||||||||||||||||||| |||||| ||||    
T  26274543 ttctctcttcctaatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcatt 26274607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 38595268 - 38595332
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  38595268 ttctctcttcctaatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 38595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 41608479 - 41608411
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  || |||||||||||||||||||  | |||| |||||||||||||||||||||    
T  41608479 ttctctcttcctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtttatgtaacattttcc 41608411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 47452306 - 47452242
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| || ||||||||||||||| ||||||||||||||| |||| |||||| ||||    
T  47452306 ttctctcttcctattgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcatt 47452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 50630572 - 50630629
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatg 62  Q
    |||||||||||||||| || ||||||||||||||||||| ||||||| ||||| ||||    
T  50630572 ttctctcttcctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatg 50630629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 5958986 - 5958918
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | ||||  |||| |||||||||||||||    
T  5958986 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaatgtgtctatgtaacattttcc 5958918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 47748556 - 47748624
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  |||||||||||||| |||||||  | |||| ||||| |||||||||||||||    
T  47748556 ttctctcttcctaatacatggggtgtacaagagtgtatgcaattaaaaggtgtctatgtaacattttcc 47748624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 50590986 - 50590918
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||| | |||||||||||||||    
T  50590986 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtatctatgtaacattttcc 50590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 44454093 - 44454165
Alignment:
Q  5 ttctctcttcctaatgtatggggt----gtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||| |||||||    ||| ||||||||||  ||||||| |||||||||||||||||||||    
T  44454093 ttctctcttcctaatgcatggggtcagagtataagggtgtataagaataaatggtgtttatgtaacattttcc 44454165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 8346370 - 8346309
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    ||||||||||||| |||| |||||||| |||||||| ||||||| ||| |||||||| ||||    
T  8346370 tctcttcctaatgcatggagtgtacaaaggtgtatgagaataaatggtatttatgtatcatt 8346309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 6260984 - 6261052
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||| ||| | ||| |||||||||| ||||||||  |||||| ||||| |||||||||||||||    
T  6260984 ttctctctttctagtatatagggtgtacaaaggtgtatgaaaataaatggtgtgtatgtaacattttcc 6261052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 11152364 - 11152296
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||| | || |||||||||| |||| |||||| ||||||| ||||| ||| |||||||||||    
T  11152364 ttctctcttcccagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatataacattttcc 11152296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 43247 - 43310
Alignment:
Q  6 tctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||| |||||| |||||||||||||| ||||||  ||||||||||| | |||||| ||||    
T  43247 tctctctttctaatgcatggggtgtacaagagtgtataagaataaagggtatctatgtatcatt 43310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 35003351 - 35003294
Alignment:
Q  16 taatgtatggggtgtacaa--gggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||  |||||||||  | ||||||||||| ||||||||||||||    
T  35003351 taatgtatggggtgtacaatagggtgtatg--attaaagggtgttcatgtaacattttcc 35003294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 45 - 74
Target Start/End: Complemental strand, 37814806 - 37814777
Alignment:
Q  45 gaataaagggtgtttatgtaacattttccc 74  Q
    ||||||||||||||||||||||||||||||    
T  37814806 gaataaagggtgtttatgtaacattttccc 37814777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 44332357 - 44332289
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  || | |||||||||||||||||  | |||| ||| | |||||||||||||||    
T  44332357 ttctctcttcctaatacatagagtgtacaagggtgtatgcaattaaaaggtatctatgtaacattttcc 44332289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 5e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31976362 - 31976430
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  31976362 ttctctcttcctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 31976430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31110747 - 31110679
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||| ||| |||||||||||||||    
T  31110747 ttctctcttcctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacattttcc 31110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 11427732 - 11427796
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  11427732 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 29857941 - 29858005
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  29857941 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatt 29858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 32869792 - 32869856
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| ||||    
T  32869792 ttctctcttcctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 32869856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15990028 - 15989960
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  15990028 ttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 15989960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 17598668 - 17598732
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  17598668 ttctctcttcctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 17598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 22880644 - 22880580
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  |||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  22880644 ttctctcttcctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcatt 22880580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 30341346 - 30341278
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| |||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  30341346 ttctctcttcctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 30341278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 4231662 - 4231730
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  4231662 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 4231730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 15508010 - 15507942
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| |||||||||||||||| ||||||  | |||| ||||| |||||||||||||||    
T  15508010 ttctctcttcctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacattttcc 15507942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 15832691 - 15832743
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgt 57  Q
    |||| ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  15832691 ttctatcttcctaatgcatggggtgtacaagggtgtattggaataaagggtgt 15832743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 31953016 - 31952948
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |||||||||| |||| |||||| ||||||| ||||| |||||||||||||||    
T  31953016 ttctctcttcctagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 31952948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 22422043 - 22421997
Alignment:
Q  27 gtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  22422043 gtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 22421997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 23128110 - 23128067
Alignment:
Q  8 tctcttcctaatgtatggggtgtacaagggtgtatgggaataaa 51  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||||    
T  23128110 tctcttcctaatgcatgggatgtacaagggtgtatggaaataaa 23128067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Complemental strand, 26466850 - 26466799
Alignment:
Q  22 atggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||| |||||||| || || | ||||||||||||||||||||||||||||||    
T  26466850 atggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttcc 26466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 28536470 - 28536408
Alignment:
Q  9 ctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||| || ||||||||||||||||||||||  |||||| | |||  ||||||||||||    
T  28536470 ctcttcctactgcatggggtgtacaagggtgtatgaaaataaatgatgtcgatgtaacatttt 28536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Complemental strand, 3213428 - 3213400
Alignment:
Q  45 gaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||    
T  3213428 gaataaagggtgtttatgtaacattttcc 3213400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 6209451 - 6209388
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| ||||||| | |||| ||||||||||||| | |||||| ||||    
T  6209451 ttctctcttcctaatgcatgggatgtacaaagatgta-gggaataaagggtatctatgtatcatt 6209388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 21293749 - 21293777
Alignment:
Q  45 gaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||    
T  21293749 gaataaagggtgtttatgtaacattttcc 21293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 915 - 848
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  915 ttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 915 - 848
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  915 ttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 1e-21; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 29240000 - 29240068
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  29240000 ttctctcttcctagtgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacattttcc 29240068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31910306 - 31910374
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||    
T  31910306 ttctctcttcctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacattttcc 31910374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 41236461 - 41236525
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  41236461 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 41236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 50526157 - 50526089
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  50526157 ttctctcttcctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 50526089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 40574893 - 40574959
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||| |||||||||    
T  40574893 ttctctcttcctaatatatggggtgtacaagggtgtatgagaataaaaggtgtctatctaacatttt 40574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 6034158 - 6034222
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||||| ||||    
T  6034158 ttctctcttcctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 24995093 - 24995029
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||| ||||| ||||||||||||| |||||||||||||||||||||| |||||| ||||    
T  24995093 ttctctcttcttaatgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcatt 24995029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 41823996 - 41824064
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||| ||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||    
T  41823996 ttctctcttcctaatgcatgaggtgtacaaaggtgtatgagaataaatggtgtctatgtaacattttcc 41824064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 42044353 - 42044289
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||| ||||    
T  42044353 ttctctcttcctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatt 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 48183035 - 48182971
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  48183035 ttctctcttcttaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 50052414 - 50052346
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||  ||||||||| |||||||||||||||||||||| |||||||||||||||    
T  50052414 ttctctcttcctagtgcataaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacattttcc 50052346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 54473519 - 54473455
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||  |||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  54473519 ttctctcttcctaatacatggagtgtacaagggtgtatgggaataaagggtgttcatgtatcatt 54473455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 19670702 - 19670634
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  19670702 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 19670634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 29547945 - 29547877
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  29547945 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 29547877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 55475305 - 55475373
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||||||||||||||||||||  | |||| ||||| |||||||||||||||    
T  55475305 ttctctcttcctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 55475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 23608349 - 23608413
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| ||| |||||||| || |||||||||||||||| ||| |||||| ||||    
T  23608349 ttctctcttcctaatgcatgaggtgtacagggatgtatgggaataaaggatgtctatgtatcatt 23608413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 43487823 - 43487883
Alignment:
Q  11 cttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||| |||||||||||||| ||||||||  | |||||||||||||||||| |||||||    
T  43487823 cttcctagtgtatggggtgtaccagggtgtactgaaataaagggtgtttatgtgacatttt 43487883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 480433 - 480382
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtg 56  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||| |||||    
T  480433 ttctctcttcctaatgcatggggtgtacaaaggtgtatggaaataatgggtg 480382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 18924481 - 18924413
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| |||||| |||||||||||  | |||| ||||| |||||||||||||||    
T  18924481 ttctctcttcctaatacatgaggtgtaaaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 18924413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 71
Target Start/End: Original strand, 29978009 - 29978065
Alignment:
Q  15 ctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatttt 71  Q
    ||||||||||||||||||||| |||||| |||||||| | | | |||||||||||||    
T  29978009 ctaatgtatggggtgtacaagtgtgtataggaataaaagatatctatgtaacatttt 29978065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 47986322 - 47986389
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||||| ||||||||||||||| | ||| || ||||| |||||||||||||||    
T  47986322 ttctctcttcctaatacatgggatgtacaagggtgtat-gcaattaaaggtgtctatgtaacattttcc 47986389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 50813878 - 50813810
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| | ||||||||||||||||  | |||| ||||| |||||||||||||||    
T  50813878 ttctctcttcctaatacatgagatgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 50813810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 1771315 - 1771366
Alignment:
Q  22 atggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || || | ||||||||||||||| ||||||||||||||    
T  1771315 atggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttcc 1771366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 3481787 - 3481826
Alignment:
Q  34 agggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  3481787 agggtgtatgagaataaagggtgtctatgtaacattttcc 3481826  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 11511448 - 11511402
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaa 51  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  11511448 ttctctcttcttaatgcatgaggtgtacaagggtgtatggaaataaa 11511402  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 17983729 - 17983664
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattt 70  Q
    |||||||||||||||  ||| ||||||||||||||||||  | ||||  |||| ||||||||||||    
T  17983729 ttctctcttcctaatacatgaggtgtacaagggtgtatgcaattaaaaagtgtctatgtaacattt 17983664  T

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Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28480254 - 28480186
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||| | ||||||||| |||||    ||||||||||| |||||||||||||||    
T  28480254 ttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcc 28480186  T

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Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28481129 - 28481061
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||| | ||||||||| |||||    ||||||||||| |||||||||||||||    
T  28481129 ttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcc 28481061  T

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Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 28482004 - 28481936
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||| || ||| | ||||||||| |||||    ||||||||||| |||||||||||||||    
T  28482004 ttctctcttcctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcc 28481936  T

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Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 29589726 - 29589658
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||  ||| |||||||||| |||||||  | |||| ||||| ||||||| |||||||    
T  29589726 ttctctcttcctaatacatgaggtgtacaagagtgtatgcaattaaaaggtgtctatgtaatattttcc 29589658  T

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Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 73
Target Start/End: Original strand, 55966418 - 55966446
Alignment:
Q  45 gaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||||||||||||||||||    
T  55966418 gaataaagggtgtttatgtaacattttcc 55966446  T

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Target: scaffold0237 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 69
Target Start/End: Original strand, 4143 - 4207
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  4143 ttctctcttcctaatgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatt 4207  T

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Target: scaffold0110 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 8849 - 8781
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||| ||||| |||||||||||||||    
T  8849 ttctctcttcctaatatatggggtgtacaagggtgtataagaataaaaggtgtctatgtaacattttcc 8781  T

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Target: scaffold0321 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 10095 - 10031
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacatt 69  Q
    |||||||||||||||| || |||||||||||||||||||| ||||| |||||| |||||| ||||    
T  10095 ttctctcttcctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcatt 10031  T

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Target: scaffold0316 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 17217 - 17285
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttcc 73  Q
    |||||||||||||   |||  ||||||||| ||||||||| |||||||||||| |||||||||||||||    
T  17217 ttctctcttcctagaatataaggtgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcc 17285  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 152612 - 152679
Alignment:
Q  5 ttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtttatgtaacattttc 72  Q
    ||||||||| |||||  ||||| ||||||||||||||||  | |||| ||||| ||||||||||||||    
T  152612 ttctctctttctaatacatgggatgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttc 152679  T

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