View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19689_low_15 (Length: 253)
Name: NF19689_low_15
Description: NF19689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19689_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 72 - 233
Target Start/End: Original strand, 28192240 - 28192401
Alignment:
| Q |
72 |
aatcaaataagtgacgtcaatggtagtcatcgtaacgactaaaaatatgggaatcatcatacaacaaaaaagacaaatgagcaggccacacaccagccaa |
171 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
28192240 |
aatcaaataagtgacgtcaatggtagtcatcgtaatgactaaaaatatgggaatcatcatacaacaaaaaagacaaatgagcaggtcacacaccagccaa |
28192339 |
T |
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| Q |
172 |
acaaacctcaagtgcttagagctataaaattaagtaataaggtacttgtggatggatggata |
233 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28192340 |
acaaacctcaagtgcttagagctataaaattaagtaataaggtacttgtggatggatggata |
28192401 |
T |
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