View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19689_low_7 (Length: 473)
Name: NF19689_low_7
Description: NF19689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19689_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 436; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 15 - 470
Target Start/End: Complemental strand, 33036872 - 33036417
Alignment:
| Q |
15 |
attatcctcatgattgtccaacaagcaagctcattaagagagtctgaggtgaccacctcgtcgtagagtatagtgcagtaaaggatcgtgcctcctacat |
114 |
Q |
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| T |
33036872 |
attatcctcatgattgtccaacaagcaagctcattaagagagtctgaggtgaccacctcgtcgtagagtatagtgcagtaaaggatcgtgcctcctacct |
33036773 |
T |
|
| Q |
115 |
catctcaagaagcatcacttctaggattcctacatgtagcacaaaactatgcaccctgcattgtttgagggacaacctcgtttccataacttgaaagaac |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036772 |
catctcaagaagcatcacttctaggattcctacatgtagcacaaaactatgcaccctgcattgtttgagggacaacctcgtttccataacttgaaagaac |
33036673 |
T |
|
| Q |
215 |
caagcaccaacatgttccactgtcttagcacatacatactatcaaatcattaatgggatgctattactaataaagagcttatgtgaattggataggtgca |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |
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| T |
33036672 |
caagcaccaacatgttccactgtcttagcacatacatactatcaaatcattaatgggatgctattactaataaaaagcttatgtgaattagataggtgca |
33036573 |
T |
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| Q |
315 |
tttgtttatctcaaaatcaattactataaacaaacattatttatttgtaactaaccgaaccagatggcaagaggaaaaacaagaacaacaaggagtgtat |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036572 |
tttgtttatctcaaaatcaattactataaacaaacattatttatttgtaactaaccgaaccagatggcaagaggaaaaacaagaacaacaaggagtgtat |
33036473 |
T |
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| Q |
415 |
catttgaatgtatccctataagtacaacttctcccataggtatgttcatctcactc |
470 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |
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| T |
33036472 |
catttgaatgtatcactataagtacaacttctcccataggtatgttcacctcactc |
33036417 |
T |
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