View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1968_1D_low_2 (Length: 694)

Name: NF1968_1D_low_2
Description: NF1968_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1968_1D_low_2
NF1968_1D_low_2
[»] chr1 (8 HSPs)
chr1 (17-681)||(31229823-31230487)
chr1 (68-306)||(42624006-42624230)
chr1 (68-170)||(18136413-18136516)
chr1 (68-153)||(52946192-52946277)
chr1 (69-161)||(11398282-11398374)
chr1 (69-153)||(52935150-52935234)
chr1 (69-153)||(52942785-52942869)
chr1 (68-123)||(52938560-52938615)
[»] chr5 (2 HSPs)
chr5 (69-305)||(10548172-10548410)
chr5 (155-306)||(30803601-30803767)
[»] scaffold0590 (4 HSPs)
scaffold0590 (68-228)||(4958-5122)
scaffold0590 (235-297)||(4868-4930)
scaffold0590 (235-297)||(7545-7607)
scaffold0590 (105-157)||(7709-7761)
[»] chr4 (4 HSPs)
chr4 (211-302)||(34441548-34441639)
chr4 (69-153)||(40225492-40225576)
chr4 (215-306)||(8332633-8332724)
chr4 (91-160)||(17225256-17225324)
[»] chr7 (2 HSPs)
chr7 (69-153)||(47762053-47762137)
chr7 (72-134)||(25998371-25998433)
[»] chr2 (1 HSPs)
chr2 (66-157)||(42735257-42735350)
[»] chr3 (3 HSPs)
chr3 (100-173)||(30174398-30174471)
chr3 (69-138)||(52098928-52099000)
chr3 (100-138)||(7051121-7051159)
[»] chr6 (2 HSPs)
chr6 (163-229)||(27368877-27368943)
chr6 (163-229)||(27459224-27459290)


Alignment Details
Target: chr1 (Bit Score: 506; Significance: 0; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 506; E-Value: 0
Query Start/End: Original strand, 17 - 681
Target Start/End: Complemental strand, 31230487 - 31229823
Alignment:
Q  17 tttgttagtttcggggaaagaattgcgttgattaattcagttcttgaaagtatgtaatgagtcttagagttagaaggggcatcatgggaaataggaatat 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  31230487 tttgttagttttggggaaagaattgcgttgattaattcagttcttggaagtatgtaatgagtcttagagttagaaggggcgttatgggaaataggaatat 31230388  T
Q  117 ggacccttataaatatgagaaaaaccaatggaataagcatggaaattgtgatgtcaacattctcctcctaacctcttctcttgttttactatccttattt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31230387 ggacccttataaatatgagaaaaaccaatggaataagcatggaaattgtgatgtcaacattctcctcctaacctcttctcttgttttactatccttattt 31230288  T
Q  217 tcctgcaattttactctctc--attgtgtgttcacagtgaaacattatcaattaactgagatttccttatatcagttttagtatcattacaaagtatgcc 314  Q
     |||||||||||||   ||   |||||    || || || |    |  ||||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  31230287 ccctgcaattttacctcctgcaattgtactctctcattgtactcctg-caattaattgagatttccttatatcaattttagtatcattacaaagtatgcc 31230189  T
Q  315 cattttgaatctatcctttatgaaaatattggttaaggtttggagaatagttgttaaagctcaaaaaaggtttctttagggtagttcaagaaatatgagt 414  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31230188 cattttcaatctatcctttatgaaaatattggttaaggtttggagaatagttgttaaagctcaaaaaaggtttctttagggtagttcaagaaatatgagt 31230089  T
Q  415 aaaattgtttaggtcaagtgatcagatgtttgtaggtcaaaatcgatggatgggccgggggttagagatctcagattgcttagtttaagcttacttgtta 514  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31230088 aaaattgtttaggtcaagtgatcagatgtttgtaggtcaaaatcgatggatgggccgggggttagagatctcagattgcttagtttaagcttacttgtta 31229989  T
Q  515 ggtgtagatgcggcgcttgttggtggacatgaattctatctagaaagaggtcttgacaacaaagtatggtctaactgattttgagtgatcataccaag-n 613  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  31229988 ggtgtagat--ggcgcttgttggtggacatgaattctatctagaaagaggtcttgacaacaaagtatggtctaactgattttgagtgatcataccaagaa 31229891  T
Q  614 nnnnnnntctcaatcaattttgttgatcataacatagaacaagccatatcatatcaactgatgtccat 681  Q
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31229890 aaaaaaatctcaatcaattttgttgatcataacatagaacaagccatatcatatcaactgatgcccat 31229823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 68 - 306
Target Start/End: Original strand, 42624006 - 42624230
Alignment:
Q  68 atgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataag-catggaaattgtg 166  Q
    ||||||||||||  ||||||  |||| |||| || ||||||  |||| ||||| |||||||||| ||||||  |||| | || ||| |||| ||||||||    
T  42624006 atgtaatgagtcaaagagttgaaaggagcattataggaaatgtgaatgtggactcttataaataagagaaag-ccaaggaaaaaaggcatgaaaattgtg 42624104  T
Q  167 atgtcaacattctcctcctaacctcttctcttgttttactatccttattttcctgcaattttactctctcattgtgtgttcacagtgaaacattatcaat 266  Q
    ||||||||||||| |||||||||||| |||||||||| ||              |||||| ||||||||| |||||||||||||||||||||||||||||    
T  42624105 atgtcaacattcttctcctaacctctcctcttgttttgct--------------gcaattgtactctctcgttgtgtgttcacagtgaaacattatcaat 42624190  T
Q  267 taactgagatttccttatatcagttttagtatcattacaa 306  Q
    ||| |||||||||||||||||| |||||||| ||||||||    
T  42624191 taattgagatttccttatatcaattttagtaccattacaa 42624230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 68 - 170
Target Start/End: Original strand, 18136413 - 18136516
Alignment:
Q  68 atgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaa-ccaatggaataagcatggaaattgtg 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||| ||  ||||    
T  18136413 atgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggacccttataaatatgagaaaaagccaaggaaataagcatgaaatatgtg 18136512  T
Q  167 atgt 170  Q
    ||||    
T  18136513 atgt 18136516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 52946192 - 52946277
Alignment:
Q  68 atgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataag 153  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  52946192 atgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggacccttataaatatgagaaaagccaaggaaataag 52946277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 69 - 161
Target Start/End: Complemental strand, 11398374 - 11398282
Alignment:
Q  69 tgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataagcatggaaa 161  Q
    |||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||| | |||||| |||||||    
T  11398374 tgtaatgagtcttagagttagaagtggcattatggaaaataggaatatggacccttataaatatgagaaaagccaaggaaataaggatggaaa 11398282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 52935150 - 52935234
Alignment:
Q  69 tgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataag 153  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  52935150 tgtaatgagtctaaaagttagaaggggcattatgggaaataggaatatggacccttataaatatgagaaaagccaaggaaataag 52935234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 52942785 - 52942869
Alignment:
Q  69 tgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataag 153  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  52942785 tgtaatgagtctaaaagttagaaggggcattatgggaaataggaatatggacccttataaatatgagaaaagccaaggaaataag 52942869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 68 - 123
Target Start/End: Original strand, 52938560 - 52938615
Alignment:
Q  68 atgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggaccct 123  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52938560 atgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggaccct 52938615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 159; Significance: 3e-84; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 69 - 305
Target Start/End: Original strand, 10548172 - 10548410
Alignment:
Q  69 tgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataagcatggaa-at-tgtg 166  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||| |||| | |||||| |||||| || ||||    
T  10548172 tgtaatgagtcttagagttagaaggggcattatggaaaataggaatatggacctttataaatatgagaaaagccaaggaaataagtatggaatatgtgtg 10548271  T
Q  167 atgtcaacattctcctcctaacctcttctcttgttttactatccttattttcctgcaattttactctctcattgtgtgttcacagtgaaacattatcaat 266  Q
    ||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10548272 atgtcaacattcttcttctaacctcttctctcattttactatccttattttcctgcaattttactctgtcattgtgtgttcacagtgaaacattatcaat 10548371  T
Q  267 taactgagatttccttatatcagttttagtatcattaca 305  Q
    ||| |||||||||||||||||  |||||||| |||||||    
T  10548372 taattgagatttccttatatccattttagtaccattaca 10548410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 30803767 - 30803601
Alignment:
Q  155 atggaaattgtgatgtcaacattctcctcctaacctcttctcttgttttactatccttattttcctgcaat---------------tttactctctcatt 239  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||               |||||| |||||||    
T  30803767 atggaaattgtgatgtcaacattcttctcctaacctcttctcttgttttactatccttattttcctgcaattttatttcctacaattttactatctcatt 30803668  T
Q  240 gtgtgttcacagtgaaacattatcaattaactgagatttccttatatcagttttagtatcattacaa 306  Q
    ||||||||| |||||||||||||||||||| | ||||| |||||||||| |||||||| | ||||||    
T  30803667 gtgtgttcaaagtgaaacattatcaattaatttagattcccttatatcaattttagtaccgttacaa 30803601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 102; Significance: 3e-50; HSPs: 4)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 5122 - 4958
Alignment:
Q  68 atgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggaccct--tataaatatgagaaaaaccaatggaataagcatggaa-at-t 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||| |||| | |||||||||| || || |    
T  5122 atgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggacccttatataaatatgagaaaagccaaggaaataagcatgaaatatgt 5023  T
Q  164 gtgatgtcaacattctcctcctaacctcttctcttgttttactatccttattttcctgcaatttt 228  Q
    |||||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||||    
T  5022 gtgatgtcaacattcttcttctaacctcttctctcattttactatccttattttcctgcaatttt 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 4930 - 4868
Alignment:
Q  235 tcattgtgtgttcacagtgaaacattatcaattaactgagatttccttatatcagttttagta 297  Q
    ||||||| ||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||    
T  4930 tcattgtatgttcacagggaaacattatcaattaattgagatttccttatatcaattttagta 4868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 235 - 297
Target Start/End: Complemental strand, 7607 - 7545
Alignment:
Q  235 tcattgtgtgttcacagtgaaacattatcaattaactgagatttccttatatcagttttagta 297  Q
    ||||||| |||||| |||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  7607 tcattgtatgttcatagtgaaacattatcaattaattgagatttccttttatcaattttagta 7545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 105 - 157
Target Start/End: Complemental strand, 7761 - 7709
Alignment:
Q  105 aaataggaatatggacccttataaatatgagaaaaaccaatggaataagcatg 157  Q
    ||||||||||||| ||||||||||||| |||||||| |||   ||||||||||    
T  7761 aaataggaatatgaacccttataaatacgagaaaaatcaagaaaataagcatg 7709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 211 - 302
Target Start/End: Complemental strand, 34441639 - 34441548
Alignment:
Q  211 ttattttcctgcaattttactctctcattgtgtgttcacagtgaaacattatcaattaactgagatttccttatatcagttttagtatcatt 302  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||    
T  34441639 ttattttcctgcaattgtactctgtcattgtgtgttcacagtgaaacattatcaattaattgagatttccttatatcaattttagtaccatt 34441548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 69 - 153
Target Start/End: Complemental strand, 40225576 - 40225492
Alignment:
Q  69 tgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataag 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| |||| | ||||||    
T  40225576 tgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggaccctaataaatatgagaaaagccaaggaaataag 40225492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 215 - 306
Target Start/End: Original strand, 8332633 - 8332724
Alignment:
Q  215 tttcctgcaattttactctctcattgtgtgttcacagtgaaacattatcaattaactgagatttccttatatcagttttagtatcattacaa 306  Q
    |||||||||||| |||||| | ||||||| |||||||  |||||||||||||||| |||||||||||||||||| |||||||| ||||||||    
T  8332633 tttcctgcaattatactctgtgattgtgtattcacagcaaaacattatcaattaattgagatttccttatatcaattttagtaccattacaa 8332724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 17225324 - 17225256
Alignment:
Q  91 aggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataagcatggaa 160  Q
    |||||||  ||||||||||| |||| ||||||||||||||| ||||||| |||| | | |||||||||||    
T  17225324 aggggcaatatgggaaatagaaata-ggacccttataaataagagaaaagccaaggaagtaagcatggaa 17225256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 47762053 - 47762137
Alignment:
Q  69 tgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataag 153  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  47762053 tgtaatgagtcttagagttagaaggggcattatggaaaataggaatatggacccttataaatatgagaaaagccaaggaaataag 47762137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 134
Target Start/End: Complemental strand, 25998433 - 25998371
Alignment:
Q  72 aatgagtcttagagttagaaggggcatcatgggaaataggaatatggacccttataaatatga 134  Q
    |||||||| ||||||||||||  |||| |||| |||||||||||| ||||| |||||||||||    
T  25998433 aatgagtcatagagttagaagatgcattatggaaaataggaatatagacccgtataaatatga 25998371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 66 - 157
Target Start/End: Original strand, 42735257 - 42735350
Alignment:
Q  66 gtatgtaatgagtcttagagttagaaggggcatcatgggaaataggaatatggacc--cttataaatatgagaaaaaccaatggaataagcatg 157  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||  ||| | ||||||||||    
T  42735257 gtatgtaatgagtcttagagttagaaggggcattatgggaaataggaatatggaccctcttataaatatgagaaaaggcaaggaaataagcatg 42735350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 30174471 - 30174398
Alignment:
Q  100 atgggaaataggaatatggacccttataaatatgagaaaaaccaatggaataagcatggaaattgtgatgtcaa 173  Q
    |||||||  ||||||||||| ||||||||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  30174471 atgggaataaggaatatggatccttataaataagagaaaagccaaggaaataagcatggaaattgtgatgtcaa 30174398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 138
Target Start/End: Original strand, 52098928 - 52099000
Alignment:
Q  69 tgtaatgagtcttagagttagaag---gggcatcatgggaaataggaatatggacccttataaatatgagaaa 138  Q
    ||||||||||||||||||||||||   || ||| || | |||||||||||| ||||||||||||||| |||||    
T  52098928 tgtaatgagtcttagagttagaagaaaggacattatagaaaataggaatatagacccttataaatataagaaa 52099000  T

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Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 138
Target Start/End: Original strand, 7051121 - 7051159
Alignment:
Q  100 atgggaaataggaatatggacccttataaatatgagaaa 138  Q
    |||||||| ||||||||||||||||||||||| ||||||    
T  7051121 atgggaaaaaggaatatggacccttataaataagagaaa 7051159  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 27368877 - 27368943
Alignment:
Q  163 tgtgatgtcaacattctcctcctaacctcttctcttgttttactatccttattttcctgcaatttta 229  Q
    ||||||||||||||||| || |||||| |||||||  ||||||||||||||||||| ||||||||||    
T  27368877 tgtgatgtcaacattcttcttctaaccacttctctcattttactatccttattttcttgcaatttta 27368943  T

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Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 27459224 - 27459290
Alignment:
Q  163 tgtgatgtcaacattctcctcctaacctcttctcttgttttactatccttattttcctgcaatttta 229  Q
    ||||||||||||||||| || |||||| |||||||  ||||||||||||||||||| ||||||||||    
T  27459224 tgtgatgtcaacattcttcttctaaccacttctctcattttactatccttattttcttgcaatttta 27459290  T

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