View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1968_1D_low_24 (Length: 275)

Name: NF1968_1D_low_24
Description: NF1968_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1968_1D_low_24
NF1968_1D_low_24
[»] chr4 (13 HSPs)
chr4 (24-221)||(40760945-40761142)
chr4 (26-221)||(52918043-52918238)
chr4 (24-221)||(38989252-38989449)
chr4 (24-221)||(45658070-45658268)
chr4 (25-221)||(13721882-13722078)
chr4 (24-221)||(40691530-40691727)
chr4 (24-221)||(55610243-55610433)
chr4 (84-221)||(11649068-11649205)
chr4 (121-221)||(53270769-53270868)
chr4 (218-275)||(40761207-40761264)
chr4 (223-275)||(38989519-38989571)
chr4 (223-275)||(44109214-44109266)
chr4 (223-275)||(55610503-55610555)
[»] chr7 (12 HSPs)
chr7 (24-221)||(35583613-35583810)
chr7 (24-221)||(33851452-33851649)
chr7 (24-221)||(110074-110271)
chr7 (24-221)||(15031155-15031352)
chr7 (24-221)||(29330827-29331024)
chr7 (24-221)||(38000011-38000208)
chr7 (24-156)||(41792594-41792726)
chr7 (24-127)||(7253821-7253924)
chr7 (116-221)||(43747858-43747963)
chr7 (169-221)||(7254089-7254141)
chr7 (166-209)||(22203367-22203410)
chr7 (223-275)||(109952-110004)
[»] chr6 (8 HSPs)
chr6 (24-221)||(13038296-13038493)
chr6 (24-221)||(29436299-29436496)
chr6 (24-221)||(34950260-34950457)
chr6 (25-142)||(12303907-12304023)
chr6 (83-162)||(20386692-20386771)
chr6 (116-177)||(33554183-33554244)
chr6 (223-275)||(13038174-13038226)
chr6 (223-275)||(34950138-34950190)
[»] chr1 (16 HSPs)
chr1 (24-221)||(39599596-39599793)
chr1 (24-221)||(4852745-4852942)
chr1 (24-221)||(10221794-10221991)
chr1 (24-221)||(10311248-10311445)
chr1 (24-221)||(5748405-5748602)
chr1 (26-218)||(18277904-18278096)
chr1 (24-221)||(7198585-7198782)
chr1 (63-221)||(7563151-7563309)
chr1 (24-221)||(50890393-50890590)
chr1 (24-221)||(17384454-17384651)
chr1 (24-221)||(30516889-30517086)
chr1 (101-185)||(15499935-15500019)
chr1 (164-221)||(22334148-22334205)
chr1 (223-275)||(10311515-10311567)
chr1 (223-275)||(18277779-18277831)
chr1 (223-275)||(22334275-22334327)
[»] chr3 (16 HSPs)
chr3 (26-221)||(3940001-3940196)
chr3 (24-221)||(44206261-44206458)
chr3 (26-221)||(21449215-21449409)
chr3 (31-221)||(41973187-41973377)
chr3 (24-217)||(49325866-49326059)
chr3 (24-213)||(47373320-47373508)
chr3 (24-221)||(8484978-8485174)
chr3 (35-221)||(48063603-48063790)
chr3 (24-215)||(21978439-21978631)
chr3 (24-215)||(22000870-22001062)
chr3 (24-209)||(9331922-9332107)
chr3 (24-214)||(18877422-18877600)
chr3 (24-74)||(22163054-22163104)
chr3 (223-275)||(3940266-3940318)
chr3 (223-275)||(21978707-21978759)
chr3 (223-275)||(22001138-22001190)
[»] chr2 (11 HSPs)
chr2 (25-221)||(5462934-5463130)
chr2 (24-218)||(15111900-15112094)
chr2 (25-221)||(5936891-5937087)
chr2 (26-214)||(18964721-18964909)
chr2 (24-221)||(34949880-34950077)
chr2 (83-184)||(33946243-33946344)
chr2 (223-275)||(34949758-34949810)
chr2 (83-148)||(2734623-2734688)
chr2 (116-197)||(41255518-41255599)
chr2 (223-275)||(15112164-15112216)
chr2 (113-161)||(42014750-42014798)
[»] chr5 (10 HSPs)
chr5 (24-202)||(24854467-24854645)
chr5 (24-201)||(6431185-6431362)
chr5 (24-218)||(41614912-41615106)
chr5 (24-210)||(31470723-31470909)
chr5 (24-160)||(5342631-5342767)
chr5 (25-202)||(27949900-27950077)
chr5 (83-198)||(10133541-10133656)
chr5 (83-161)||(8241664-8241742)
chr5 (83-184)||(28443674-28443775)
chr5 (223-275)||(24854715-24854767)
[»] chr8 (8 HSPs)
chr8 (24-207)||(24832144-24832327)
chr8 (31-217)||(10292-10478)
chr8 (84-221)||(41836057-41836194)
chr8 (83-184)||(16796064-16796165)
chr8 (83-162)||(12191382-12191461)
chr8 (83-162)||(12435810-12435889)
chr8 (222-275)||(24832013-24832066)
chr8 (223-275)||(10552-10604)
[»] scaffold0168 (1 HSPs)
scaffold0168 (24-221)||(16878-17075)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 40760945 - 40761142
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  40760945 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacaatgtcaccctctccgggctgaaggatgatttggatcaaatc 40761044  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||| ||| ||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||    
T  40761045 aaccgtcaactcaaccacaaagacacgaggagggttgacggagttcaatatcgatgtccattatccgacttagccgaatctcttcgcttcagccggat 40761142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 52918043 - 52918238
Alignment:
Q  26 tagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaa 125  Q
    ||||| |||||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||    
T  52918043 tagcgacagtctactacaacggtggaacaccaccccatctgtttaggattcgagaggatgtcaccctctccgggctgaaggatgagctggatcaaatcaa 52918142  T
Q  126 ccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||    
T  52918143 ccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccgactcagccggatctctttgcttcagccggat 52918238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 38989252 - 38989449
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||| | |||||||   ||| |||| ||||||||||| ||||||||||| ||||||||||||    
T  38989252 gctagcggcagtctactacaacggtggaacaccaccccatctatctaggattaacgacgatgtaaccctctccgggctgaaggatgagctggatcaaatc 38989351  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| || |||||| |||||||||||||||||||||||||    
T  38989352 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtctgactcatccggatctcttcgcttcagccggat 38989449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 45658070 - 45658268
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctg-tctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaat 122  Q
    |||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||||    
T  45658070 gctagcggcagtctactacaacggtggaacaccacccccatctgtttaggattcgagacgatgtcaccctctcctggctgaaggatgagctggatcaaat 45658169  T
Q  123 caaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||||||||||| ||||||| |||||    |||||||| | ||||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||    
T  45658170 caaccgtcaactcaaccacagagacacatagagggtggtcggagttgaatatcgatgtccattgtctgactcagccggatctcttcgctttagccggat 45658268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 221
Target Start/End: Complemental strand, 13722078 - 13721882
Alignment:
Q  25 ctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatca 124  Q
    ||||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||  ||||||||| | |||||||||||||    
T  13722078 ctagcagcaatctactacaacggtggaacaccaccccatctgtttaggattcgagatgatgtcaccctctccgagctgaaggataagctggatcaaatca 13721979  T
Q  125 accgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||| || ||||||||| |||||| |||||||||||| |||||    
T  13721978 accgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccgttgtccgactcaaccggatatcttcgcttcagtcggat 13721882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 40691530 - 40691727
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||| || ||||||||||||||| |||| |||||  ||||||||||||||||||| ||||||||||||||   ||||||||||| ||| ||||||||    
T  40691530 gctagcgacaatctactacaacggtgtaacatcaccccatctgtttaggattcgagacgatgtcaccctctccaagctgaaggatgagctgaatcaaatc 40691629  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||| || | ||||||| |||||||||||||||||||||||||    
T  40691630 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccgttgttcgactcaaccggatctcttcgcttcagccggat 40691727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 55610243 - 55610433
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||  | |||||||| ||| ||||||      
T  55610243 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgggttaaaggatgagctgaatcaaa-- 55610340  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
         |||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||||||    
T  55610341 -----tcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccaactcagtcggatctcttcgcttcagccggat 55610433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 11649205 - 11649068
Alignment:
Q  84 tgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtcca 183  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||| ||||||| ||||||| ||||| ||||||||||| | | ||||||||| ||  ||||    
T  11649205 tgtcaccctcttcgggctgaaggatgagctggatcaaatcaactgtcaactcaaccacagagacatgaggagggtggtcggtgttgaatatcgaattcca 11649106  T
Q  184 ttatccgactcagccggatctcttcgcttcagccggat 221  Q
    || ||||| |||||| ||||||| ||||||||||||||    
T  11649105 ttgtccgaatcagccagatctctacgcttcagccggat 11649068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 121 - 221
Target Start/End: Complemental strand, 53270868 - 53270769
Alignment:
Q  121 atcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccgga 220  Q
    |||||||||||||| || |||| ||||| ||||| ||||| |  |||||||||| |||||||||| ||||||||| | ||| ||||||||||||||||||    
T  53270868 atcaaccgtcaactcaatcacagagacacgaggaaggtggtcgaagttgaatatcgatgtccattgtccgactcaactgga-ctcttcgcttcagccgga 53270770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 218 - 275
Target Start/End: Original strand, 40761207 - 40761264
Alignment:
Q  218 ggattgatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||||    
T  40761207 ggatcgatcgagttggacttttcgttggttagatttgctgaacaaattctgaaaagtt 40761264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 38989519 - 38989571
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  38989519 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 38989571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 44109266 - 44109214
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  44109266 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 44109214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 55610503 - 55610555
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  55610503 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 55610555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 6e-77; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 35583613 - 35583810
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  35583613 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccggactgaaggatgagttggatcaaatc 35583712  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||| ||||||| ||||||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||||| |||||||||||||| ||||||||    
T  35583713 aactgtcaactcaaccacaaagacaagaggagggtggtcggagttgaatatcgatgtccattgtccgactcagctggatctcttcgctttagccggat 35583810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 33851649 - 33851452
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||    
T  33851649 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgagctgaaggatgagctggatcaaatc 33851550  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||| |||||| |||||||||||| ||||||||||||||| ||||||    
T  33851549 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatatccattgtccgactcagccagatctcttcgcttcatccggat 33851452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 110271 - 110074
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||||| ||||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  110271 gctagcggcggtctattacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgggctgaaggatgagctggatcaaatc 110172  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| ||||| ||||| | ||||||| |||||||||||||    
T  110171 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccgaatcagcagaatctctttgcttcagccggat 110074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 15031155 - 15031352
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||   |||||||||| ||| ||||||||    
T  15031155 gctagcggcagtctactacaacggtggaacaccaacccatctgtttaggattcgagacgatgtcaccctctccgagatgaaggatgagctgaatcaaatc 15031254  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||| ||||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||||    
T  15031255 aactgtcaactcaaccacaaagacacgaggagggtggtcagagttgaatatcgatgtccgttgtccgactcaaccggatctcttcgcttcagccggat 15031352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 29330827 - 29331024
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||||| ||| |||||||||||| ||||||||||| ||||||||||||    
T  29330827 gctagcagcagtctactacagcggtggaacaccaccccatctgtttaggattcgagacgatgccaccctctccgggctgaaggatgagctggatcaaatc 29330926  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||| |||||| || |||||||||| ||||||||||| | ||||||||||| |||||||||  ||| ||||||||||||||| |||||||||| ||||    
T  29330927 aaccatcaactcaatcacaaagacacgaggagggtggtcggagttgaatatcgatgtccatcgtccaactcagccggatctcatcgcttcagctggat 29331024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 38000208 - 38000011
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  38000208 gctagcggcaatctactacaacggtggaacaccaccccatttgtttaggattcgagacgatgtcaccctctccgggctgaaggatgagctggatcaaatc 38000109  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||||||||||  | |||||||||| ||| |||||||   ||||||||||| ||||| |||| ||||||||||||  |||||||||||||||||||||    
T  38000108 aaccgtcaactcgaacacaaagacacgagcagggtggttggagttgaatatcgatgttcattgtccgactcagccatatctcttcgcttcagccggat 38000011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 24 - 156
Target Start/End: Complemental strand, 41792726 - 41792594
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||| |||||||||||| |||||||||||||  | ||||||||||||||||| |||||||||||| ||| ||||||||||| || |||||||||    
T  41792726 gctagcggcaatctactacaacgatggaacaccaccccatatgtttaggattcgagacgatgtcaccctcttcgggctgaaggatgagctagatcaaatc 41792627  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagg 156  Q
    ||||||||||| ||||||||||||| |||||||    
T  41792626 aaccgtcaactcaaccacaaagacacgaggagg 41792594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 24 - 127
Target Start/End: Original strand, 7253821 - 7253924
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||| |||||||||||  ||||||||||     
T  7253821 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctcttcgggctgaaggatgagttggatcaaatt 7253920  T
Q  124 aacc 127  Q
    ||||    
T  7253921 aacc 7253924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 221
Target Start/End: Original strand, 43747858 - 43747963
Alignment:
Q  116 atcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcag 215  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||||| |  |||||||||||||||    
T  43747858 atcaaatcaaccgtcaactcaaccacaaagacacgaggagggtggtcggggttgaatatcgatgtccattgtccgactcagtcaaatctcttcgcttcag 43747957  T
Q  216 ccggat 221  Q
    ||||||    
T  43747958 ccggat 43747963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 7254089 - 7254141
Alignment:
Q  169 gaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  7254089 gaatatcgatgtccattgtccgactcagccggatctcttcgcttcaaccggat 7254141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 166 - 209
Target Start/End: Original strand, 22203367 - 22203410
Alignment:
Q  166 gttgaatattgatgtccattatccgactcagccggatctcttcg 209  Q
    ||||||||| | |||||||| |||||||||||||||||||||||    
T  22203367 gttgaatatcgttgtccattgtccgactcagccggatctcttcg 22203410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 110004 - 109952
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  110004 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 109952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 146; Significance: 6e-77; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 13038493 - 13038296
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||| ||    
T  13038493 gctagcggcagtatactacaacggtggaacatcaccctgtctgtttaggattcgagacgatgtcaccctctccgggctgaaggatgagctggatcaattc 13038394  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  13038393 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccgactcagccagatctcttcgcttcagccggat 13038296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 29436496 - 29436299
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||  |||||||||||  ||||||||| |    
T  29436496 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgagctgaaggatgagttggatcaaagc 29436397  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||| ||| ||||||||||| | ||||||||||| ||||||  || |  |||||| |||||||||||||||||||||||||    
T  29436396 aaccgtcaactcaaccacaaacacacgaggagggtggtcggagttgaatatcgatgtctgttgtttgactcaaccggatctcttcgcttcagccggat 29436299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 34950457 - 34950260
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||| ||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||  || || ||||| ||||||||||||    
T  34950457 gctagcggaagtctactacaacggtggaacaccaccccatctatttaggattcgagacgatgtcaccctctccgagctaaatgatgagctggatcaaatc 34950358  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||| | || |||||| || |||||||||||||||||||||||||    
T  34950357 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgttcgttgtccgacacaaccggatctcttcgcttcagccggat 34950260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 12303907 - 12304023
Alignment:
Q  25 ctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatca 124  Q
    ||||||||||||||| | ||| | |||| |||||||  |||||||||||||||  || | |||||  |||| || ||||||||||| |||||||||||||    
T  12303907 ctagcggcagtctacaataacaggggaaaaccaccccatctgtttaggattcgcaacgacgtcactttctcggg-ctgaaggatgagctggatcaaatca 12304005  T
Q  125 accgtcaacttaaccaca 142  Q
    |||||||||| |||||||    
T  12304006 accgtcaactcaaccaca 12304023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 20386692 - 20386771
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggac 162  Q
    ||||||| ||||||||  |||||||| | || |||||||||||||||||||| ||||| | |||||  ||||| ||||||    
T  20386692 atgtcacgctctccgggttgaaggatcagctagatcaaatcaaccgtcaactcaaccatagagacacaaggagagtggac 20386771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 33554183 - 33554244
Alignment:
Q  116 atcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattga 177  Q
    ||||||||||||||||||| ||||| | |||||  ||||| |||||||| ||||| ||||||    
T  33554183 atcaaatcaaccgtcaactcaaccatagagacacaaggagagtggacagtgttgattattga 33554244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 13038226 - 13038174
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  13038226 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 13038174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 34950190 - 34950138
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  34950190 gatcgagttggacgcttcgttggttagatatgctgaacaaattctgaaaagtt 34950138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 39599793 - 39599596
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||    
T  39599793 gctagcggcagtctactacaacggtggaacaccaccccgtttgtttaggatttgagacaatgtcaccctctccgagctgaaggatgagctggatcaaatc 39599694  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||| ||||| ||||||||||| | ||||||||||| ||||||| || ||||||||| |||||||||||||||||||||||||    
T  39599693 aaccgtcaactcaaccacagagacacgaggagggtggtcggagttgaatatcgatgtccgttgtccgactcaaccggatctcttcgcttcagccggat 39599596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 4852942 - 4852745
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||    
T  4852942 gctagcggcagtctactagaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgagctgaaggatgagctggatcaaatc 4852843  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||| ||||||| ||||||| ||||| |||||||||||  |||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  4852842 aactgtcaactcaaccacagagacacgaggagggtggttagagttgaatatcgatgtccattgtccgactcaaccggatctcttcgcttcagccggat 4852745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 10221794 - 10221991
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||||| ||||| |||||  ||||||||||||||  ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  10221794 gctagcggctgtctattacaattgtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgggctgaaggatgagctggatcaaatc 10221893  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  10221894 aaccgtcaactcaaccacaaagacacgaggagggtggtcggggttgaatatcgatgtccattgtccgactcagccggatctcttcgcttcagccggat 10221991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 10311248 - 10311445
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||  |||||||||||||||  ||||||||||| ||||||||||||    
T  10311248 gctagcggcagtctactacaactgtggaacaccaccccatctgtttaggattcgagatgatgtcaccctctccgagctgaaggatgagctggatcaaatc 10311347  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||| || || |||||| |||||||||||||||||||||||||    
T  10311348 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtcctttgtctgactcatccggatctcttcgcttcagccggat 10311445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 5748405 - 5748602
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||| ||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||||||| ||  |||||||| || ||||||||||||    
T  5748405 gctagtggcagtctactacaacggtggaacaccaccgcatctgtttaggattcgagacgatgtcaccctcttcgagctgaaggaggagctggatcaaatc 5748504  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||| | ||||||||||||| |||||||||||  ||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||    
T  5748505 aaccgtcaattcaaccacaaagacacgaggagggtggttagagttgaatattgatgtccattgttcgactcagccggatctattcgcttcagccggat 5748602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 18278096 - 18277904
Alignment:
Q  26 tagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaa 125  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||   |||||||| || | |||||||||||    
T  18278096 tagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagactatgtcaccctctccgtgttgaaggattattttgatcaaatcaa 18277997  T
Q  126 ccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccg 218  Q
    ||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| ||||||||| |||||| |||||||||||||||    
T  18277996 ccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccgactcatccggatatcttcgcttcagccg 18277904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 7198585 - 7198782
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||| ||||||||||||||||||| ||||  ||||||||||||| ||||| |||||||| ||||||  |||||||| ||   ||||||||||    
T  7198585 gctagcggcagtatactacaacggtggaacactaccccatctgtttaggattggagacgatgtcaccatctccgagctgaaggacgagagggatcaaatc 7198684  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||| ||||||||| ||||||||||| ||||||||||||| ||||||| || ||||||||| ||||||||||| |||||||||||||    
T  7198685 aaccgtcaactcaactacaaagacacgaggagggtggtcagagttgaatatcgatgtccgttgtccgactcaaccggatctctttgcttcagccggat 7198782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 63 - 221
Target Start/End: Original strand, 7563151 - 7563309
Alignment:
Q  63 tctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggac 162  Q
    ||||||||||||||   || |||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||| |    
T  7563151 tctgtttaggattcacaacgatgtcaccctctccgggctgaaggatgagctggatcaaatcaaccgtcaactcaaccacagagacacgaggagggtggtc 7563250  T
Q  163 agagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
     | ||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||    
T  7563251 ggtgttgaatatcgatgtccattgtccgactcagtcggatctcttcgcttcagccggat 7563309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 50890590 - 50890393
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||| ||||| ||||| || || |||| |||||||  | |||||||||||||  || ||||||||||| | || ||||||||||||||||||||||||    
T  50890590 gctagcagcagtatactaaaatgggggaaaaccaccccatatgtttaggattcgcaacgatgtcaccctcactgggctgaaggatgatctggatcaaatc 50890491  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||| ||||| ||||||||||| | | ||||||||| |||||| ||| ||||||||||||||||||||||| |||||||||||    
T  50890490 aaccgtcaactcaaccacagagacacgaggagggtggtctgtgttgaatatcgatgtcaattgtccgactcagccggatctcttcggttcagccggat 50890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 17384454 - 17384651
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||| || ||||||||||||||||| ||||||||||  ||||||||||||| |  || ||||||||||||| || ||||||| ||| ||||||||||||    
T  17384454 gctagtgggagtctactacaacggtgaaacaccaccccatctgtttaggatttgcaacgatgtcaccctctcagggctgaagggtgagctggatcaaatc 17384553  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    || |||||| | ||||||| ||||| ||||||||||| | | ||||||||| ||| ||||||  |||| ||| |||||||||||||||||||| ||||    
T  17384554 aatcgtcaaatcaaccacagagacacgaggagggtggtcggtgttgaatatcgatctccattgaccgaatcatccggatctcttcgcttcagcaggat 17384651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 30516889 - 30517086
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||||||||||||||||  || || | || ||||  ||||||||||||||   || |||||||||||||| | || |||||| | ||||||||||||    
T  30516889 gctagcggcagtctactacactggggggaaacaaccccatctgtttaggattcacaacgatgtcaccctctccaggctaaaggatcagctggatcaaatc 30516988  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||| | ||||| ||||||| ||||| |||||||||||   | ||||||||| |||||   || ||| ||||||    ||||||||| |||||||||||    
T  30516989 aactgccaactcaaccacagagacacgaggagggtggtatgtgttgaatatcgatgtttgttgtccaactcagtttcatctcttcggttcagccggat 30517086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 15500019 - 15499935
Alignment:
Q  101 tgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccatt 185  Q
    |||||||| | ||| ||||||||||||||||||| |||||||||||||  |||||||||||| | ||||| ||| || |||||||    
T  15500019 tgaaggattagctgcatcaaatcaaccgtcaactcaaccacaaagacactaggagggtggacggtgttgagtatcgacgtccatt 15499935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 22334148 - 22334205
Alignment:
Q  164 gagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||| || |||||||||  |||||||||||||||||| |||||    
T  22334148 gagttgaatatcgatgtccgttgtccgactcaatcggatctcttcgcttcagtcggat 22334205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 10311515 - 10311567
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    |||||||||||||  |||||||||||||| ||||||||| ||| |||||||||    
T  10311515 gatcgagttggatgcttcgttggttagatctgctgaacaaattatgaaaagtt 10311567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 18277831 - 18277779
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  18277831 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 18277779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 22334275 - 22334327
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  22334275 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 22334327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 136; Significance: 5e-71; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 3940001 - 3940196
Alignment:
Q  26 tagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaa 125  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||    
T  3940001 tagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatatcaccctctccggactgaaggatgagctggatcaaatcaa 3940100  T
Q  126 ccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||  ||||||||||||| ||||||||||| ||||||||||||| || ||||||| |||||||||| ||||||||||| |||| |||||||    
T  3940101 ccgtcaacacaaccacaaagacacgaggagggtggtcagagttgaatatcgacgtccattgtccgactcagtcggatctcttcacttcggccggat 3940196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 44206261 - 44206458
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||    
T  44206261 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgagctgaaggatgagctggatcaaatc 44206360  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||  |||||| ||||||||||||| ||||||||||| | ||||||||||| ||||||| || || |||||| |||||||||||||||||||||||||    
T  44206361 aacaatcaactaaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccgttgtctgactcaaccggatctcttcgcttcagccggat 44206458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 21449215 - 21449409
Alignment:
Q  26 tagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaa 125  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||| |  |||||||||||  |||||||||||||    
T  21449215 tagcggcagtctactacaacggtgga-caccaccccatctgtttaggattcgagacgatgtcaccctctctgagctgaaggatgagatggatcaaatcaa 21449313  T
Q  126 ccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||| ||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  21449314 ccgacaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccgactcagccggatctcttcgcttcagccggat 21449409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 31 - 221
Target Start/End: Original strand, 41973187 - 41973377
Alignment:
Q  31 gcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtc 130  Q
    ||||||||||||||||||||||||||| |   |||||||| |||||||||| ||||| ||||||||||  |||||||||| |||||||||||||||||||    
T  41973187 gcagtctactacaacggtggaacaccatctcatctgtttaagattcgagacgatgtcgccctctccgggttgaaggatgagctggatcaaatcaaccgtc 41973286  T
Q  131 aacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||| ||||||||||||| |||||||||||   ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  41973287 aactcaaccacaaagacatgaggagggtggttggagttgaatatcgatgtccattgtccgactcagccggatctcttcgcttcagccggat 41973377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 217
Target Start/End: Original strand, 49325866 - 49326059
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||| ||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||  || |||||||| ||||||||||||    
T  49325866 gctagcggcagtatactacaacggtggaacaccaccccatctgtttaggattcaagacgatgtcaccctctccgagcttaaggatgagctggatcaaatc 49325965  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagcc 217  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||||| | || ||||||||| |||||||||||||||||||||    
T  49325966 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgttcgttgtccgactcaaccggatctcttcgcttcagcc 49326059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 47373320 - 47373508
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  47373320 gctagcggcagtctactacaacggtggaacaccaccca-tctgtttaggattcgagacgatgtcaccctctccgggttgaaggatgagctggatcaaatc 47373418  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttc 213  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| ||| || ||| ||||||| ||  |||||||||||||||    
T  47373419 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatttctattgtccgacttagttggatctcttcgcttc 47373508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 24 - 221
Target Start/End: Original strand, 8484978 - 8485174
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||| |||   ||||||||||||||||||| |||| ||||||||  | ||||||||||| ||||||||| ||    
T  8484978 gctagcggcagtctactacaacggtggaacacaaccaa-tctgtttaggattcgagacgatgttaccctctctaggctgaaggatgagctggatcaagtc 8485076  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    ||||||||||| ||||||||||||| ||||||||||| | || ||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||    
T  8485077 aaccgtcaactcaaccacaaagacacgaggagggtggtcggacttgaatataaatgtccattgtccgactcagccggatctcttcgctttagccggat 8485174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 221
Target Start/End: Complemental strand, 48063790 - 48063603
Alignment:
Q  35 tctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaact 134  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  48063790 tctactacaacggtggaacaccatcccatctgtttaggattcgagacgatgtcaccctctccgagctgaaggatgagctggatcaaatcaaccgtcaact 48063691  T
Q  135 taaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactc-agccggatctcttcgcttcagccggat 221  Q
     ||||||||||||| ||||||||||  | ||||||||||| |||| || || |||||||| | |||||||||||||||||||||||||    
T  48063690 caaccacaaagacacgaggagggtgatcggagttgaatatcgatgcccgttgtccgactcaaaccggatctcttcgcttcagccggat 48063603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 21978439 - 21978631
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggat-tcgagacaatgtcaccctctccggactgaaggatgatctggatcaaat 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| || | |  || |||||||||||||| |||| |||||||| |||||||||||    
T  21978439 gctagcggcagtcttctacaacggtggaacaccaccctatctgtttagaatattgcaacgatgtcaccctctcccgactaaaggatgagctggatcaaat 21978538  T
Q  123 caaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcag 215  Q
    |||||||||||| |||| || ||||| ||||||||||| | | ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  21978539 caaccgtcaactcaaccgcagagacacgaggagggtggtcggtgttgaatatcgatgtccattgtccgactcagccggatctcttcgcttcag 21978631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 22000870 - 22001062
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggat-tcgagacaatgtcaccctctccggactgaaggatgatctggatcaaat 122  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||| || | |  || |||||||||||||| |||| |||||||| |||||||||||    
T  22000870 gctagcggcagtcttctacaacggtggaacaccaccctatctgtttagaatattgcaacgatgtcaccctctcccgactaaaggatgagctggatcaaat 22000969  T
Q  123 caaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcag 215  Q
    |||||||||||| |||| || ||||| ||||||||||| | | ||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  22000970 caaccgtcaactcaaccgcagagacacgaggagggtggtcggtgttgaatatcgatgtccattgtccgactcagccggatctcttcgcttcag 22001062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 209
Target Start/End: Complemental strand, 9332107 - 9331922
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||| |||||||||||||||||||  |||||||  | |||||||||||||  || |||||||||||||||| ||||||||  | ||||||||||||    
T  9332107 gctagcggaagtctactacaacggtggagaaccaccccatttgtttaggattcgcaacgatgtcaccctctccgggctgaaggaccagctggatcaaatc 9332008  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcg 209  Q
    ||||||||||| ||| ||| ||||| ||||||||||| | | ||||||||| |||||||||| ||||||||||||||||| |||||    
T  9332007 aaccgtcaactcaactacagagacacgaggagggtggtcggtgttgaatatcgatgtccattgtccgactcagccggatcacttcg 9331922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 214
Target Start/End: Complemental strand, 18877600 - 18877422
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||||||||||||||||||||||||||| |||||  ||||||||||||| |  || || ||| ||||||| | || |||||||| ||||||||||||    
T  18877600 gctagcggcagtctactacaacggtggaacatcaccccatctgtttaggatttgcaacgatatcatcctctcccggctaaaggatgagctggatcaaatc 18877501  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttca 214  Q
    |||||            || ||||| ||||||||||| | | ||| ||||| |||||||||| ||||||||||||||||| ||| ||||||    
T  18877500 aaccg------------cagagacacgaggagggtggtcggtgttaaatatcgatgtccattttccgactcagccggatcgctttgcttca 18877422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 22163054 - 22163104
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggat 74  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  22163054 gctagcggcagtctactacaatggtggaacaccaccccatctgtttaggat 22163104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 3940266 - 3940318
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    |||||||||||||  |||||| ||||||| ||||||||| ||| |||||||||    
T  3940266 gatcgagttggatgcttcgtttgttagatctgctgaacaaattctgaaaagtt 3940318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 21978707 - 21978759
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  21978707 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 21978759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 22001138 - 22001190
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  22001138 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 22001190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 133; Significance: 3e-69; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 5462934 - 5463130
Alignment:
Q  25 ctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatca 124  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||| ||||||||||| ||||||| ||| |    
T  5462934 ctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattctagacgatgtcaccctctccgggctgaaggatgagctggatcgaatta 5463033  T
Q  125 accgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||||||||| ||||||||||||| ||||||||||| | |||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  5463034 accgtcaactcaaccacaaagacacgaggagggtggtcggagtggaatatcgatgtccattgtccgactcagccggacctcttcgcttcagccggat 5463130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 15111900 - 15112094
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||  | |||||||||    
T  15111900 gctagcggtagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgggctgaaggatgagttagatcaaatc 15111999  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccg 218  Q
    ||| ||||||| ||||||| ||||| ||||||||||| ||||||| ||||||||||| |||| ||||||| | ||||||||||||||||||||||    
T  15112000 aactgtcaactcaaccacagagacacgaggagggtggtcagagtttaatattgatgttcattgtccgacttaaccggatctcttcgcttcagccg 15112094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 25 - 221
Target Start/End: Original strand, 5936891 - 5937087
Alignment:
Q  25 ctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatca 124  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||   || |||||||||||||||| ||||||||||| |||||||||||||    
T  5936891 ctagcggtagtctactacaacggtggaacaccaccccatctgtttaggattcacaacgatgtcaccctctccgggctgaaggatgagctggatcaaatca 5936990  T
Q  125 accgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    | |||||||| ||||||| |  || ||||||| ||| | | ||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||    
T  5936991 atcgtcaactcaaccacagaagcacgaggaggttggtcggtgttgaatatcgatgtccattgtccgactcagccgaatctcttcgcttcaaccggat 5937087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 26 - 214
Target Start/End: Complemental strand, 18964909 - 18964721
Alignment:
Q  26 tagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaa 125  Q
    |||| ||||||||||||||||| |||| |||||||  ||||||||||||| | ||| ||||||||||||||||  ||||||||||  |||||||||||||    
T  18964909 tagctgcagtctactacaacgggggaaaaccacccaatctgtttaggatttgcgacgatgtcaccctctccgggatgaaggatgagttggatcaaatcaa 18964810  T
Q  126 ccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttca 214  Q
    ||||||||| ||||||||||||| |||||||||||     |||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  18964809 ccgtcaactcaaccacaaagacaggaggagggtggttgatgttgaatattgatgtccattgtccgactcagccggatctcttcgattca 18964721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 34950077 - 34949880
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||||| ||||||||||||||||||||||| |||||  ||||||||||||| |  || || ||||| ||||||| ||||||||||| ||||||||||||    
T  34950077 gctagcgacagtctactacaacggtggaacatcaccccatctgtttaggatttgcaacgatctcaccttctccgggctgaaggatgagctggatcaaatc 34949978  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    || |||||||| ||||||| ||||| ||| |||||||     ||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||    
T  34949977 aatcgtcaactcaaccacatagacacgagtagggtggttgttgttgaatatcgatgtccattgtccgactcaaccggatctcttcgcttcagccggat 34949880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 33946344 - 33946243
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtcc 182  Q
    |||||||||||||| || |||||| | | ||||||||||||||||| ||| | ||| |||||||||   |||||||||| || ||||| ||| |||||||    
T  33946344 atgtcaccctctccagattgaagggtcagctggatcaaatcaaccgccaattcaactacaaagacacacggagggtggatagtgttgagtatcgatgtcc 33946245  T
Q  183 at 184  Q
    ||    
T  33946244 at 33946243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 34949810 - 34949758
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||  ||||||||||||||| ||||||||| ||| |||||||||    
T  34949810 gatcgagttggacgtttcgttggttagatctgctgaacaaattctgaaaagtt 34949758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 2734688 - 2734623
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagaca 148  Q
    |||||||||||||| |  |||||| | | ||||||||||||||||||||||| ||| ||| |||||    
T  2734688 atgtcaccctctccaggttgaagggtcagctggatcaaatcaaccgtcaactcaactacagagaca 2734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 116 - 197
Target Start/End: Complemental strand, 41255599 - 41255518
Alignment:
Q  116 atcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagc 197  Q
    ||||||||||||||||| | ||||||  |||||  ||||||||||| || ||||| ||| || |||||||  ||||||||||    
T  41255599 atcaaatcaaccgtcaaatgaaccacgtagacacaaggagggtggatagtgttgagtatcgacgtccattgaccgactcagc 41255518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 15112164 - 15112216
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  15112164 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 15112216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 42014750 - 42014798
Alignment:
Q  113 tggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtgga 161  Q
    |||||||||||||||||||||| | ||||| |||||  |||||||||||    
T  42014750 tggatcaaatcaaccgtcaactcacccacagagacacaaggagggtgga 42014798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 5e-68; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 24 - 202
Target Start/End: Original strand, 24854467 - 24854645
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||  ||||||||||| ||||||||||||    
T  24854467 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgagctgaaggatgagctggatcaaatc 24854566  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggat 202  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| ||||||||||||||||    
T  24854567 aaccgtcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtccgactcagccggat 24854645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 201
Target Start/End: Original strand, 6431185 - 6431362
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  6431185 gctagcggcagtctactacaacggtggaacaccaccccatctatttaggattcgagacgatgtcaccctctccgggctgaaggatgagctggatcaaatc 6431284  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccgga 201  Q
    ||||||||||| ||||||||||||| ||||||||||| |  |||||||||| |||||||||| |||||||||| ||||    
T  6431285 aaccgtcaactcaaccacaaagacacgaggagggtggtcgaagttgaatatcgatgtccattgtccgactcagtcgga 6431362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 24 - 218
Target Start/End: Original strand, 41614912 - 41615106
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||||||   || ||||||||||||||||  |||||||||| ||||||||||||    
T  41614912 gctagcggcaatctactacaacggtggaacaccaccccatctgtttaggattcacaacgatgtcaccctctccgggatgaaggatgagctggatcaaatc 41615011  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccg 218  Q
    ||||||||||| |||||||||||||  |||||||||| | | ||||||||| ||||||||||  |||||||| ||||||||||||||||||||||    
T  41615012 aaccgtcaactcaaccacaaagacacaaggagggtggtcggtgttgaatatcgatgtccatttcccgactcaaccggatctcttcgcttcagccg 41615106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 24 - 210
Target Start/End: Original strand, 31470723 - 31470909
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||| ||||||||| ||||||||||||||||||||||   ||||||||||||||  || |||||||||||||||  |||||||||||| |||||||||||    
T  31470723 gctatcggcagtcttctacaacggtggaacaccaccccaactgtttaggattcgcaacgatgtcaccctctccgagctgaaggatgatgtggatcaaatc 31470822  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgc 210  Q
    ||||||||||| |||| |||||||| ||||||||||| | | | ||||||  |||||||||| ||||||||||||||||||||||||    
T  31470823 aaccgtcaactcaaccgcaaagacacgaggagggtggtcggtgatgaataccgatgtccattgtccgactcagccggatctcttcgc 31470909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 24 - 160
Target Start/End: Original strand, 5342631 - 5342767
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||    
T  5342631 gctagcggcaatctactacaacggtggaacaccaccccctctgtttaggattcgagacgatgtcaccctctccgggttgaaggatgaactggatcaaatc 5342730  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtgg 160  Q
    ||| ||||||| ||||||||||||| |||||||||||    
T  5342731 aactgtcaactcaaccacaaagacacgaggagggtgg 5342767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 25 - 202
Target Start/End: Complemental strand, 27950077 - 27949900
Alignment:
Q  25 ctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatca 124  Q
    |||||| || ||||||||||||  |||| |||||||  |||||||||||||||  || |||||||||| ||||  ||||||||| | |||||||||||||    
T  27950077 ctagcgacaatctactacaacgagggaaaaccaccccatctgtttaggattcgcaacgatgtcaccctttccgtgctgaaggatcagctggatcaaatca 27949978  T
Q  125 accgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggat 202  Q
    |||||||||| ||| ||| ||||| ||||| || || | | ||||||||| |||||||||| |||||||||| |||||    
T  27949977 accgtcaactcaactacagagacacgaggatggcggtcggtgttgaatatcgatgtccattgtccgactcagtcggat 27949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 198
Target Start/End: Original strand, 10133541 - 10133656
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtcc 182  Q
    |||||||| ||||| |  |||||||| | ||||||||||||||||| ||||| ||||||||||||| | |||||||||||   ||||| ||| ||  |||    
T  10133541 atgtcaccatctccaggttgaaggatcagctggatcaaatcaaccgccaactcaaccacaaagacacgcggagggtggacgatgttgagtatcgacatcc 10133640  T
Q  183 attatccgactcagcc 198  Q
    || | |||||||||||    
T  10133641 atcaaccgactcagcc 10133656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 161
Target Start/End: Original strand, 8241664 - 8241742
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtgga 161  Q
    |||||||||||| | |  |||||||| ||||||||||||||||||||||||| || |||| ||||| ||||| ||||||    
T  8241664 atgtcaccctctacaggttgaaggatcatctggatcaaatcaaccgtcaactcaatcacagagacacgaggatggtgga 8241742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 28443775 - 28443674
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtcc 182  Q
    |||||||| |||| ||  |||||||| | ||||||||||||||||  ||||| ||||||| ||||| | |||||||||||   ||||| ||| |||||||    
T  28443775 atgtcaccttctctgggttgaaggatcagctggatcaaatcaaccaccaactcaaccacagagacacgcggagggtggacgatgttgagtatcgatgtcc 28443676  T
Q  183 at 184  Q
    ||    
T  28443675 at 28443674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 24854715 - 24854767
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||   |||||||||||||| ||||||||| ||| |||||||||    
T  24854715 gatcgagttggacgcttcgttggttagatctgctgaacaaattctgaaaagtt 24854767  T

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Target: chr8 (Bit Score: 128; Significance: 3e-66; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 207
Target Start/End: Complemental strand, 24832327 - 24832144
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    ||||| || ||||||||||||| |||||||| |||||  |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  24832327 gctagaggtagtctactacaacagtggaacagcaccccatctgtttaggattcgagacaatgtcaccctctccgggctgaaggatgagctggatcaaatc 24832228  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctctt 207  Q
    ||||||||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||||    
T  24832227 aaccgtcaactcaaccacaaagacatgaggagggtggtcggagttgaatatcgatgtccattgtccgactcagccggatctctt 24832144  T

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Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 31 - 217
Target Start/End: Original strand, 10292 - 10478
Alignment:
Q  31 gcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtc 130  Q
    ||||||||||||||||||||||||||||||  ||| ||| ||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||| ||    
T  10292 gcagtctactacaacggtggaacaccaccccatctattttggattcgagacgatgtcaccctctccgagctgaaggatgagctggatcaaatcaaccatc 10391  T
Q  131 aacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagcc 217  Q
    |||| ||||||||||||| ||||||||||| | ||||||||||| ||||||  || |||||||||  || |||||||||||||||||    
T  10392 aactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtctgttgtccgactcaatcgtatctcttcgcttcagcc 10478  T

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Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 221
Target Start/End: Complemental strand, 41836194 - 41836057
Alignment:
Q  84 tgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtcca 183  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||| ||||||| ||||||| ||||| ||||||||||| | | ||||||||| ||  ||||    
T  41836194 tgtcaccctcttcgggctgaaggatgagctggatcaaatcaactgtcaactcaaccacagagacatgaggagggtggtcggtgttgaatatcgaattcca 41836095  T
Q  184 ttatccgactcagccggatctcttcgcttcagccggat 221  Q
    || ||||| |||||| ||||||| ||||||||||||||    
T  41836094 ttgtccgaatcagccagatctctacgcttcagccggat 41836057  T

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Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 83 - 184
Target Start/End: Original strand, 16796064 - 16796165
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtcc 182  Q
    |||||||||||||||   |||||||| | ||||||||||||||| ||||||| ||||||| ||||| ||||||||||||| | ||||| |||||| ||||    
T  16796064 atgtcaccctctccgagttgaaggattagctggatcaaatcaactgtcaactcaaccacagagacatgaggagggtggacggtgttgagtattgacgtcc 16796163  T
Q  183 at 184  Q
    ||    
T  16796164 at 16796165  T

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Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 12191461 - 12191382
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggac 162  Q
    |||||||| |||||||  | || ||| | ||||||||||||||||||||| | |||||||||||||  ||||||||||||    
T  12191461 atgtcaccttctccgggttaaatgatcagctggatcaaatcaaccgtcaattcaaccacaaagacacaaggagggtggac 12191382  T

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Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 83 - 162
Target Start/End: Complemental strand, 12435889 - 12435810
Alignment:
Q  83 atgtcaccctctccggactgaaggatgatctggatcaaatcaaccgtcaacttaaccacaaagacaagaggagggtggac 162  Q
    |||||||| |||||||  | || ||| | ||||||||||||||||||||| | |||||||||||||  ||||||||||||    
T  12435889 atgtcaccttctccgggttaaatgatcagctggatcaaatcaaccgtcaattcaaccacaaagacacaaggagggtggac 12435810  T

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Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 24832066 - 24832013
Alignment:
Q  222 tgatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    |||||||||||||   |||||||||||||||||||||||| ||| |||||||||    
T  24832066 tgatcgagttggacacttcgttggttagatttgctgaacaaattctgaaaagtt 24832013  T

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Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 10552 - 10604
Alignment:
Q  223 gatcgagttggatttttcgttggttagatttgctgaacagattttgaaaagtt 275  Q
    ||||||||||||  ||||||||||||||| ||||||||| ||| |||||||||    
T  10552 gatcgagttggacgtttcgttggttagatctgctgaacaaattctgaaaagtt 10604  T

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Target: scaffold0168 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 24 - 221
Target Start/End: Complemental strand, 17075 - 16878
Alignment:
Q  24 gctagcggcagtctactacaacggtggaacaccaccctgtctgtttaggattcgagacaatgtcaccctctccggactgaaggatgatctggatcaaatc 123  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||| || |||||||| ||||||||||||    
T  17075 gctagcggcagtctactacaacggtggaacaccaccccatctgtttaggattcgagacgatgtcaccctctccgggctaaaggatgagctggatcaaatc 16976  T
Q  124 aaccgtcaacttaaccacaaagacaagaggagggtggacagagttgaatattgatgtccattatccgactcagccggatctcttcgcttcagccggat 221  Q
    |||| |||||| ||||||||||||| ||||||||||| | ||||||||||| |||||||||| | | ||||| ||| ||||||| |||||||| ||||    
T  16975 aaccttcaactcaaccacaaagacacgaggagggtggtcggagttgaatatcgatgtccattgtgcaactcaaccgaatctctttgcttcagctggat 16878  T

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