View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19690_low_16 (Length: 225)

Name: NF19690_low_16
Description: NF19690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19690_low_16
NF19690_low_16
[»] chr5 (6 HSPs)
chr5 (106-204)||(4323810-4323908)
chr5 (107-190)||(8299626-8299709)
chr5 (107-190)||(25856883-25856966)
chr5 (107-173)||(27116617-27116683)
chr5 (151-184)||(21271026-21271059)
chr5 (151-184)||(21273040-21273073)
[»] chr4 (7 HSPs)
chr4 (107-175)||(5789536-5789604)
chr4 (144-204)||(11586679-11586739)
chr4 (108-179)||(7099106-7099177)
chr4 (144-187)||(28067073-28067116)
chr4 (145-184)||(46218326-46218365)
chr4 (153-187)||(17188468-17188502)
chr4 (107-173)||(23642035-23642101)
[»] chr7 (5 HSPs)
chr7 (108-183)||(22819162-22819237)
chr7 (111-180)||(12308570-12308639)
chr7 (108-183)||(17056149-17056224)
chr7 (107-173)||(4937572-4937638)
chr7 (147-195)||(39465005-39465053)
[»] chr3 (6 HSPs)
chr3 (108-183)||(31547998-31548073)
chr3 (107-175)||(16179575-16179643)
chr3 (108-183)||(44888524-44888599)
chr3 (107-173)||(2364907-2364973)
chr3 (145-187)||(36731525-36731567)
chr3 (107-184)||(35273706-35273783)
[»] chr8 (6 HSPs)
chr8 (108-172)||(40366279-40366343)
chr8 (107-190)||(20824912-20824995)
chr8 (107-173)||(7925016-7925082)
chr8 (107-173)||(8300433-8300499)
chr8 (107-180)||(37434403-37434476)
chr8 (142-202)||(15014093-15014153)
[»] chr1 (5 HSPs)
chr1 (127-183)||(21405457-21405513)
chr1 (108-183)||(22191227-22191302)
chr1 (107-173)||(35541664-35541730)
chr1 (142-195)||(11649771-11649824)
chr1 (144-180)||(43943959-43943995)
[»] chr6 (2 HSPs)
chr6 (127-198)||(24573721-24573792)
chr6 (116-190)||(17577171-17577245)
[»] chr2 (2 HSPs)
chr2 (145-184)||(42183246-42183285)
chr2 (145-187)||(18697831-18697873)
[»] scaffold0155 (1 HSPs)
scaffold0155 (153-187)||(32781-32815)
[»] scaffold0034 (1 HSPs)
scaffold0034 (107-173)||(105287-105353)


Alignment Details
Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 106 - 204
Target Start/End: Original strand, 4323810 - 4323908
Alignment:
Q  106 agttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataaggaaggtttttggtttaaagtgt 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4323810 agttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaagttgttagttgataaggaaggtttttggtttaaagtgt 4323908  T

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Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 8299626 - 8299709
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataaggaaggttt 190  Q
    |||||| |||||| ||||||| ||||||||| |  || ||||||| || |||||||||||| |||||||||||| || ||||||    
T  8299626 gttgggtgttaggaggttgcgagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggttt 8299709  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 25856883 - 25856966
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataaggaaggttt 190  Q
    |||||| |||||| ||||||| ||||||||| |  || ||||||| || ||||||| |||| |||||||||||| || ||||||    
T  25856883 gttgggtgttaggaggttgcgagagtttaacattgctttgttggggaaatggtgttagaggctgttagttgataggggaggttt 25856966  T

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Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 27116617 - 27116683
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  27116617 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 27116683  T

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Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 21271059 - 21271026
Alignment:
Q  151 gaaagtggtgttggaggttgttagttgataagga 184  Q
    |||||||||||||||||||||| |||||||||||    
T  21271059 gaaagtggtgttggaggttgttggttgataagga 21271026  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 21273073 - 21273040
Alignment:
Q  151 gaaagtggtgttggaggttgttagttgataagga 184  Q
    |||||||||||||||||||||| |||||||||||    
T  21273073 gaaagtggtgttggaggttgttggttgataagga 21273040  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 5789536 - 5789604
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagt 175  Q
    |||||| | |||| ||||| |||||||||| || ||| |||||||||||||||||||||||||||||||    
T  5789536 gttgggagataggaggttgagggagtttaatgtcactttgttgggaaagtggtgttggaggttgttagt 5789604  T

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Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 204
Target Start/End: Original strand, 11586679 - 11586739
Alignment:
Q  144 ctgttgggaaagtggtgttggaggttgttagttgataaggaaggtttttggtttaaagtgt 204  Q
    ||||| ||||| ||||||||| |||||||||||||||||||||| || |||| ||| ||||    
T  11586679 ctgttaggaaaatggtgttggcggttgttagttgataaggaagggttgtggtgtaaggtgt 11586739  T

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Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 7099177 - 7099106
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgat 179  Q
    ||||| ||||||| |||| |||||||||| | | |  |||||||||||| ||||||||| ||||||||||||    
T  7099177 ttgggtgttaggcagttgagggagtttaatgaggcgttgttgggaaagttgtgttggagtttgttagttgat 7099106  T

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Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 28067073 - 28067116
Alignment:
Q  144 ctgttgggaaagtggtgttggaggttgttagttgataaggaagg 187  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||    
T  28067073 ctgttggggaagtggtgttggaggatgttggttgataaggaagg 28067116  T

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Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 46218326 - 46218365
Alignment:
Q  145 tgttgggaaagtggtgttggaggttgttagttgataagga 184  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  46218326 tgttgggtaagtggtgttggaggttgttggttgataagga 46218365  T

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Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 17188502 - 17188468
Alignment:
Q  153 aagtggtgttggaggttgttagttgataaggaagg 187  Q
    |||||||||||||||||||| ||||||||||||||    
T  17188502 aagtggtgttggaggttgttggttgataaggaagg 17188468  T

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Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 23642035 - 23642101
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  23642035 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 23642101  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 22819162 - 22819237
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagg 183  Q
    |||||||| ||| ||||| |||||||||| ||  ||||||| || ||||||||||||||||| ||||| |||||||    
T  22819162 ttgggggtgaggaggttgagggagtttaatgtttctctgttaggcaagtggtgttggaggttattagtcgataagg 22819237  T

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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 180
Target Start/End: Original strand, 12308570 - 12308639
Alignment:
Q  111 ggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgata 180  Q
    |||||||||| |||| || ||||||   || |||||||||||||||||||||||||| || |||||||||    
T  12308570 ggggttaggcagttgaggtagtttattttgtctctgttgggaaagtggtgttggaggatgctagttgata 12308639  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 17056224 - 17056149
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagg 183  Q
    |||||||| ||| || || |||||||||| ||  ||||||| || || |||||||||||||| |||||||||||||    
T  17056224 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagg 17056149  T

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Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 4937572 - 4937638
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  4937572 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 4937638  T

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Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 39465053 - 39465005
Alignment:
Q  147 ttgggaaagtggtgttggaggttgttagttgataaggaaggtttttggt 195  Q
    ||||| ||||||||||||||| |||| ||||||||||| ||||| ||||    
T  39465053 ttgggtaagtggtgttggaggatgttggttgataaggagggtttatggt 39465005  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000002; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 31548073 - 31547998
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagg 183  Q
    |||||||| ||| || || |||||||||| ||  ||||||| ||||| |||||||||||||| |||||||||||||    
T  31548073 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggaaaatggtgttggaggttattagttgataagg 31547998  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 175
Target Start/End: Complemental strand, 16179643 - 16179575
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagt 175  Q
    |||||| |||||| ||||| |||||||||| ||  || ||||||| || ||||||||||||||||||||    
T  16179643 gttgggagttaggaggttgagggagtttaatgtcgctttgttggggaaatggtgttggaggttgttagt 16179575  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 44888599 - 44888524
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagg 183  Q
    |||||||| ||| || || |||||||||| ||  ||||||| || || |||||||||||||| |||||||||||||    
T  44888599 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagg 44888524  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 2364973 - 2364907
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  2364973 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 2364907  T

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Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 36731567 - 36731525
Alignment:
Q  145 tgttgggaaagtggtgttggaggttgttagttgataaggaagg 187  Q
    |||| |||||||||||||||||| |||| ||||||||||||||    
T  36731567 tgttaggaaagtggtgttggaggatgttggttgataaggaagg 36731525  T

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Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 35273783 - 35273706
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagga 184  Q
    |||||||||||| |||||| | ||||||||  |  ||||||| || ||||||||||||| | |||| |||||||||||    
T  35273783 gttgggggttagacggttgggagagtttaatttttctctgttagggaagtggtgttggaagatgttggttgataagga 35273706  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 40366343 - 40366279
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtt 172  Q
    |||||||||||||||||| |||||||||| |||  |||||| || || |||||||||||| ||||    
T  40366343 ttgggggttaggcggttgagggagtttaatgtggttctgtttggtaaatggtgttggaggatgtt 40366279  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 20824995 - 20824912
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataaggaaggttt 190  Q
    |||||| |||||| ||||| | ||||||||| |  || ||||||| || |||||||||||| |||||||||||| || ||||||    
T  20824995 gttgggtgttaggaggttgagagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggttt 20824912  T

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Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 7925082 - 7925016
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  7925082 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 7925016  T

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Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 8300499 - 8300433
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  8300499 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 8300433  T

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Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 180
Target Start/End: Original strand, 37434403 - 37434476
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgata 180  Q
    |||||| |||||| ||||| | ||||||||| |  || |||||||||| ||||||||| || ||||||||||||    
T  37434403 gttgggtgttaggaggttgagagagtttaacattgctttgttgggaaaatggtgttggcggctgttagttgata 37434476  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 202
Target Start/End: Complemental strand, 15014153 - 15014093
Alignment:
Q  142 ctctgttgggaaagtggtgttggaggttgttagttgataaggaaggtttttggtttaaagt 202  Q
    ||||||| || ||||||||||||||  ||||||| |||||||| ||||| |||| ||||||    
T  15014153 ctctgttagggaagtggtgttggagaatgttagtagataaggagggtttatggtataaagt 15014093  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 21405513 - 21405457
Alignment:
Q  127 gggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagg 183  Q
    |||||||||| ||  ||||||| ||||| |||||||||||||| |||||||||||||    
T  21405513 gggagtttaatgtttctctgttaggaaaatggtgttggaggttattagttgataagg 21405457  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 22191227 - 22191302
Alignment:
Q  108 ttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataagg 183  Q
    |||||||| ||| || || |||||||||| ||  ||||||| || || |||||||||||||| |||||||||||||    
T  22191227 ttgggggtgaggaggatgagggagtttaatgtttctctgttaggtaaatggtgttggaggttattagttgataagg 22191302  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Complemental strand, 35541730 - 35541664
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  35541730 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 35541664  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 142 - 195
Target Start/End: Complemental strand, 11649824 - 11649771
Alignment:
Q  142 ctctgttgggaaagtggtgttggaggttgttagttgataaggaaggtttttggt 195  Q
    ||||||| || ||||||||||||||| |||| ||||||||||| ||||| ||||    
T  11649824 ctctgttagggaagtggtgttggaggatgttggttgataaggatggtttgtggt 11649771  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 43943959 - 43943995
Alignment:
Q  144 ctgttgggaaagtggtgttggaggttgttagttgata 180  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  43943959 ctgttgggtaagtggtgttggaggatgttagttgata 43943995  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 198
Target Start/End: Complemental strand, 24573792 - 24573721
Alignment:
Q  127 gggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataaggaaggtttttggttta 198  Q
    ||||||||||| || | |||||||||||||||||||||||| || |||| ||||  || ||||| |||||||    
T  24573792 gggagtttaacttggcgctgttgggaaagtggtgttggaggatggtagtggatagagatggtttgtggttta 24573721  T

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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 190
Target Start/End: Original strand, 17577171 - 17577245
Alignment:
Q  116 taggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgttagttgataaggaaggttt 190  Q
    |||| ||||||| ||||||||| |  || ||||||| || |||||||||||| |||||||||||| || ||||||    
T  17577171 taggaggttgcgagagtttaacattgctttgttggggaaatggtgttggaggctgttagttgataggggaggttt 17577245  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 184
Target Start/End: Original strand, 42183246 - 42183285
Alignment:
Q  145 tgttgggaaagtggtgttggaggttgttagttgataagga 184  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  42183246 tgttaggaaagtggtgttggaggttgttggttgataagga 42183285  T

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Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 187
Target Start/End: Complemental strand, 18697873 - 18697831
Alignment:
Q  145 tgttgggaaagtggtgttggaggttgttagttgataaggaagg 187  Q
    |||| |||||||||||||||||| |||| ||||||||||||||    
T  18697873 tgttaggaaagtggtgttggaggatgttggttgataaggaagg 18697831  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 187
Target Start/End: Complemental strand, 32815 - 32781
Alignment:
Q  153 aagtggtgttggaggttgttagttgataaggaagg 187  Q
    |||||||||||||||||||| ||||||||||||||    
T  32815 aagtggtgttggaggttgttggttgataaggaagg 32781  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 173
Target Start/End: Original strand, 105287 - 105353
Alignment:
Q  107 gttgggggttaggcggttgcgggagtttaacgtgactctgttgggaaagtggtgttggaggttgtta 173  Q
    ||||||||||| | ||||| ||||||||||| |  || ||||||| || ||||||||||||||||||    
T  105287 gttgggggttaagaggttgagggagtttaacattgctttgttgggtaaatggtgttggaggttgtta 105353  T

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