View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19690_low_18 (Length: 202)
Name: NF19690_low_18
Description: NF19690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19690_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 24 - 186
Target Start/End: Complemental strand, 39155269 - 39155106
Alignment:
| Q |
24 |
aggtttatcaatggcgaaacttgaagctaagctaggaatgatcgttgacaaagttggacaattcttctccggcagtgaccttcttccctcctgcgatccc |
123 |
Q |
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| T |
39155269 |
aggtttatcaatggcgaaactcgaagctaagctaggaatgatcgttgacaaggttggacaattcttctccggcagtgaccttcttccctcctgcgatccc |
39155170 |
T |
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| Q |
124 |
gatatcatcgctgtactctcttccttctctatca-ttattaaacgcaccgtttccccttttctt |
186 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
39155169 |
gatatcatcgctgtactctcttccttctctatcatttattaaacgcaccgtttccccttttctt |
39155106 |
T |
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