View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19691_low_7 (Length: 284)
Name: NF19691_low_7
Description: NF19691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19691_low_7 |
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Alignment Details
Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 278
Target Start/End: Complemental strand, 34637664 - 34637387
Alignment:
| Q |
1 |
ccccaataaccaactctttacttctttttcgttcttccacaatttgaccaaccacactagtgaccttagccgccaatttatgacactttctcttcacacc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34637664 |
ccccaataaccaactctttacttctttttcgttcttccacaatttgaccaaccacactagtgaccttagccgccaatttatgacactttctcttcacacc |
34637565 |
T |
|
| Q |
101 |
ataaaagtccaaaaacttaaaatgaaaataatcttccaaattaaacttagcaattaactcatacccttccttaaccatgtttcctagttcctcacttcct |
200 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34637564 |
ataaaagtccaaaaacttaaaatcaaaataatcttccaaattaaacttagcaattaactcatacccttccttaaccatgtttcctagttcctcacttcct |
34637465 |
T |
|
| Q |
201 |
cctaaactcaaacaattataattactaatggaaccaaacacactctccaaaatattgctaagagatccttcttgcaat |
278 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34637464 |
cctaaactcaaacaattataattactaatggaaccaaacacactctccaaaatattgctaagagatccttcttgcaat |
34637387 |
T |
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