View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19694_high_9 (Length: 246)
Name: NF19694_high_9
Description: NF19694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19694_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 139; Significance: 7e-73; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 25 - 225
Target Start/End: Complemental strand, 35350396 - 35350195
Alignment:
| Q |
25 |
gaaacgctgcagtttagaatactgaagccatgaagataacttttcaagtcaa-tagtcagaattataaattccttccttgnnnnnnnnnttagtcagaat |
123 |
Q |
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| T |
35350396 |
gaaacactgcagtttagaatactgaagccatgaagataacttttcaagtcaaatagtcagaattataaattccttccttcaaaaaaaaaatagtcagaat |
35350297 |
T |
|
| Q |
124 |
tataaagtcattataatgatatgaaactgctgaataaaaatgaggtacataatctttgaatacataaaaatgagtttggaaaatttgcactattagtaac |
223 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
35350296 |
tataaagccattataatgatatgaaactgctgaataaaaatgagatacataatttttgaataaataaaaatgagtttggaaaatttgcactattagtaac |
35350197 |
T |
|
| Q |
224 |
aa |
225 |
Q |
| |
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|| |
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| T |
35350196 |
aa |
35350195 |
T |
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