View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19696_high_15 (Length: 239)

Name: NF19696_high_15
Description: NF19696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19696_high_15
NF19696_high_15
[»] chr3 (60 HSPs)
chr3 (20-94)||(6752705-6752779)
chr3 (18-94)||(30454740-30454815)
chr3 (25-79)||(6438123-6438177)
chr3 (24-94)||(34194921-34194991)
chr3 (18-91)||(579156-579229)
chr3 (18-91)||(23311611-23311684)
chr3 (18-91)||(35963185-35963258)
chr3 (18-91)||(50651055-50651128)
chr3 (18-94)||(7886632-7886708)
chr3 (29-79)||(28875450-28875500)
chr3 (25-94)||(3972315-3972384)
chr3 (25-94)||(3997494-3997563)
chr3 (18-79)||(14752238-14752299)
chr3 (18-91)||(37042435-37042508)
chr3 (18-94)||(2927322-2927398)
chr3 (18-94)||(8097033-8097109)
chr3 (27-91)||(11054330-11054394)
chr3 (26-94)||(46918228-46918296)
chr3 (18-79)||(54464925-54464986)
chr3 (142-194)||(6752870-6752922)
chr3 (18-94)||(16033002-16033078)
chr3 (18-94)||(26208047-26208123)
chr3 (27-79)||(29235229-29235281)
chr3 (24-91)||(30189609-30189677)
chr3 (15-91)||(46711676-46711750)
chr3 (24-79)||(36546581-36546636)
chr3 (24-79)||(36561679-36561734)
chr3 (18-92)||(34722622-34722696)
chr3 (25-91)||(47864231-47864297)
chr3 (25-91)||(53270275-53270341)
chr3 (33-90)||(3084199-3084256)
chr3 (18-79)||(6075114-6075175)
chr3 (18-79)||(7866513-7866574)
chr3 (25-94)||(26725006-26725075)
chr3 (26-91)||(37075001-37075066)
chr3 (18-94)||(21214268-21214344)
chr3 (18-74)||(38674903-38674959)
chr3 (158-201)||(12064782-12064825)
chr3 (18-73)||(46557237-46557292)
chr3 (41-91)||(23910531-23910581)
chr3 (25-91)||(31836959-31837025)
chr3 (37-79)||(32619860-32619902)
chr3 (18-76)||(47866946-47867004)
chr3 (25-94)||(23209295-23209364)
chr3 (34-94)||(36150967-36151028)
chr3 (33-90)||(45868525-45868582)
chr3 (18-94)||(10114938-10115014)
chr3 (18-94)||(10252038-10252114)
chr3 (26-94)||(20847283-20847351)
chr3 (18-94)||(22456023-22456099)
chr3 (18-94)||(22479069-22479145)
chr3 (34-94)||(47115898-47115958)
chr3 (55-94)||(31126275-31126314)
chr3 (63-94)||(34105608-34105639)
chr3 (173-203)||(6752936-6752966)
chr3 (17-79)||(8703141-8703201)
chr3 (17-79)||(9055028-9055088)
chr3 (33-90)||(31292653-31292710)
chr3 (18-94)||(10014296-10014372)
chr3 (152-196)||(40575347-40575391)
[»] chr5 (39 HSPs)
chr5 (18-94)||(17351417-17351493)
chr5 (25-79)||(42273683-42273737)
chr5 (18-91)||(6686413-6686486)
chr5 (18-91)||(11261943-11262016)
chr5 (26-91)||(20644051-20644116)
chr5 (18-94)||(4463389-4463465)
chr5 (26-94)||(19413178-19413246)
chr5 (18-91)||(37522648-37522721)
chr5 (18-91)||(38130175-38130248)
chr5 (18-91)||(43590021-43590094)
chr5 (26-94)||(5369087-5369155)
chr5 (18-94)||(12912350-12912426)
chr5 (18-94)||(39505289-39505364)
chr5 (24-91)||(104273-104340)
chr5 (18-93)||(10153985-10154060)
chr5 (24-74)||(12792852-12792902)
chr5 (18-79)||(32111031-32111092)
chr5 (18-91)||(37562821-37562894)
chr5 (18-91)||(38280876-38280949)
chr5 (18-94)||(25840893-25840969)
chr5 (27-94)||(6391907-6391974)
chr5 (18-89)||(20039131-20039202)
chr5 (28-91)||(42104307-42104370)
chr5 (25-79)||(9957490-9957543)
chr5 (24-74)||(12729950-12730000)
chr5 (24-89)||(32017739-32017803)
chr5 (18-91)||(34425360-34425432)
chr5 (152-208)||(1497252-1497308)
chr5 (24-76)||(23233446-23233498)
chr5 (39-94)||(2002189-2002244)
chr5 (18-93)||(43454380-43454455)
chr5 (44-94)||(5984164-5984214)
chr5 (18-88)||(30893312-30893382)
chr5 (18-94)||(8506466-8506536)
chr5 (18-94)||(3463871-3463947)
chr5 (18-94)||(8146752-8146828)
chr5 (25-72)||(8225497-8225544)
chr5 (35-94)||(24439616-24439675)
chr5 (18-94)||(8959669-8959745)
[»] chr6 (15 HSPs)
chr6 (18-94)||(7274931-7275007)
chr6 (18-88)||(12461491-12461561)
chr6 (29-91)||(21542458-21542520)
chr6 (18-91)||(11082304-11082377)
chr6 (18-94)||(30794248-30794324)
chr6 (24-78)||(34177713-34177767)
chr6 (18-91)||(3095778-3095851)
chr6 (25-94)||(21963989-21964058)
chr6 (30-92)||(5881810-5881872)
chr6 (18-91)||(35129113-35129187)
chr6 (18-94)||(4032014-4032090)
chr6 (18-94)||(16013488-16013564)
chr6 (31-94)||(16524419-16524482)
chr6 (25-94)||(31887177-31887246)
chr6 (18-94)||(4987970-4988046)
[»] chr4 (47 HSPs)
chr4 (18-94)||(35310791-35310867)
chr4 (18-91)||(20716207-20716280)
chr4 (18-94)||(1585396-1585472)
chr4 (18-88)||(29203533-29203603)
chr4 (18-91)||(4058742-4058815)
chr4 (18-91)||(47867906-47867979)
chr4 (18-94)||(5483327-5483403)
chr4 (35-94)||(25297271-25297330)
chr4 (29-91)||(2229285-2229347)
chr4 (29-91)||(10069735-10069797)
chr4 (29-91)||(20281629-20281691)
chr4 (29-91)||(26916363-26916425)
chr4 (18-91)||(16604898-16604971)
chr4 (18-79)||(24940392-24940453)
chr4 (18-94)||(42915556-42915633)
chr4 (18-79)||(56318134-56318195)
chr4 (18-94)||(8178288-8178364)
chr4 (25-81)||(35529706-35529762)
chr4 (26-94)||(46070571-46070639)
chr4 (26-94)||(50145771-50145839)
chr4 (27-90)||(12002693-12002756)
chr4 (19-94)||(47516240-47516315)
chr4 (18-91)||(7654644-7654717)
chr4 (25-94)||(8013138-8013207)
chr4 (25-94)||(8683355-8683424)
chr4 (18-91)||(14332787-14332860)
chr4 (33-90)||(17799187-17799244)
chr4 (25-94)||(48793677-48793746)
chr4 (18-94)||(5841828-5841904)
chr4 (18-94)||(17794590-17794666)
chr4 (25-91)||(41414663-41414728)
chr4 (35-76)||(32280070-32280111)
chr4 (18-79)||(39078184-39078245)
chr4 (18-94)||(5815496-5815572)
chr4 (18-94)||(32323311-32323387)
chr4 (29-88)||(17186850-17186909)
chr4 (31-94)||(40553809-40553872)
chr4 (18-94)||(28142671-28142747)
chr4 (18-94)||(37911911-37911987)
chr4 (152-208)||(47467623-47467679)
chr4 (18-74)||(52535654-52535710)
chr4 (24-79)||(55580702-55580758)
chr4 (18-89)||(23978169-23978240)
chr4 (18-89)||(28669055-28669125)
chr4 (35-94)||(30011976-30012035)
chr4 (18-94)||(5064704-5064780)
chr4 (43-94)||(19351899-19351951)
[»] chr1 (59 HSPs)
chr1 (24-91)||(39555645-39555712)
chr1 (25-91)||(16854176-16854242)
chr1 (18-88)||(28120817-28120887)
chr1 (24-94)||(32318616-32318686)
chr1 (18-91)||(2126067-2126140)
chr1 (18-79)||(6785485-6785546)
chr1 (25-94)||(10558812-10558881)
chr1 (18-91)||(15959699-15959772)
chr1 (18-91)||(32624064-32624137)
chr1 (18-94)||(5858427-5858503)
chr1 (24-90)||(6787050-6787116)
chr1 (18-88)||(42965877-42965946)
chr1 (18-91)||(12449026-12449099)
chr1 (25-78)||(33369587-33369640)
chr1 (18-91)||(47014550-47014623)
chr1 (18-94)||(3076324-3076400)
chr1 (30-94)||(3861751-3861815)
chr1 (18-94)||(5950468-5950544)
chr1 (18-78)||(24190498-24190558)
chr1 (18-94)||(24728683-24728759)
chr1 (18-94)||(37735439-37735515)
chr1 (18-94)||(39932628-39932704)
chr1 (35-94)||(30221771-30221830)
chr1 (18-88)||(7876004-7876074)
chr1 (25-79)||(13136624-13136678)
chr1 (25-91)||(33431595-33431661)
chr1 (25-91)||(43667362-43667428)
chr1 (18-87)||(298732-298801)
chr1 (26-79)||(6786875-6786928)
chr1 (29-94)||(16688176-16688241)
chr1 (18-79)||(32983242-32983302)
chr1 (18-91)||(45226167-45226240)
chr1 (18-91)||(47600098-47600171)
chr1 (18-91)||(50369991-50370063)
chr1 (18-94)||(23392222-23392298)
chr1 (18-94)||(35366259-35366335)
chr1 (18-94)||(37538838-37538914)
chr1 (35-94)||(44148892-44148951)
chr1 (18-91)||(35691421-35691495)
chr1 (25-79)||(46543018-46543072)
chr1 (18-91)||(3875076-3875153)
chr1 (35-91)||(11241073-11241129)
chr1 (25-89)||(28016807-28016871)
chr1 (18-74)||(34102049-34102105)
chr1 (18-94)||(43765323-43765399)
chr1 (31-91)||(46818561-46818621)
chr1 (25-88)||(41063777-41063840)
chr1 (24-94)||(52984968-52985038)
chr1 (18-94)||(2246070-2246146)
chr1 (27-94)||(51338953-51339021)
chr1 (30-94)||(52841501-52841565)
chr1 (18-94)||(8889753-8889822)
chr1 (25-94)||(23873886-23873955)
chr1 (18-75)||(40718707-40718764)
chr1 (18-79)||(42724123-42724184)
chr1 (18-94)||(7397735-7397811)
chr1 (31-91)||(13351722-13351782)
chr1 (18-94)||(15912227-15912303)
chr1 (18-94)||(30701441-30701517)
[»] chr7 (39 HSPs)
chr7 (25-91)||(6191081-6191147)
chr7 (18-91)||(35923281-35923354)
chr7 (18-91)||(14805899-14805972)
chr7 (18-91)||(15252893-15252966)
chr7 (18-91)||(25737685-25737758)
chr7 (18-94)||(22632118-22632194)
chr7 (24-91)||(46760315-46760382)
chr7 (26-91)||(18102567-18102632)
chr7 (18-91)||(20123738-20123811)
chr7 (18-91)||(25944605-25944678)
chr7 (18-91)||(45485984-45486057)
chr7 (27-91)||(4069041-4069105)
chr7 (25-91)||(4910691-4910757)
chr7 (18-91)||(19912827-19912900)
chr7 (25-94)||(48413754-48413823)
chr7 (27-87)||(2610630-2610690)
chr7 (26-94)||(15995756-15995824)
chr7 (18-94)||(38260345-38260421)
chr7 (18-94)||(47779633-47779709)
chr7 (36-91)||(35068907-35068962)
chr7 (37-94)||(44682925-44682982)
chr7 (18-79)||(47557671-47557732)
chr7 (26-94)||(14574601-14574669)
chr7 (24-79)||(12632414-12632469)
chr7 (18-93)||(24151638-24151712)
chr7 (35-94)||(33153080-33153139)
chr7 (27-79)||(4237785-4237837)
chr7 (27-91)||(9158128-9158191)
chr7 (26-94)||(29713226-29713294)
chr7 (18-94)||(39170563-39170639)
chr7 (55-94)||(10248594-10248633)
chr7 (43-94)||(16917525-16917576)
chr7 (31-94)||(35084115-35084178)
chr7 (25-79)||(8015743-8015797)
chr7 (152-206)||(14717995-14718049)
chr7 (35-76)||(28941226-28941267)
chr7 (24-76)||(22369261-22369313)
chr7 (27-79)||(27810805-27810857)
chr7 (152-208)||(46243944-46244000)
[»] chr2 (38 HSPs)
chr2 (25-91)||(45660401-45660467)
chr2 (18-91)||(33198689-33198762)
chr2 (18-94)||(8701631-8701707)
chr2 (24-91)||(6110257-6110324)
chr2 (29-91)||(3201366-3201428)
chr2 (25-91)||(14873999-14874065)
chr2 (18-91)||(19264129-19264202)
chr2 (18-94)||(29524096-29524172)
chr2 (26-94)||(35115859-35115927)
chr2 (18-94)||(40584453-40584529)
chr2 (18-88)||(41528285-41528355)
chr2 (18-91)||(28858338-28858411)
chr2 (18-91)||(45085286-45085359)
chr2 (18-94)||(5963230-5963305)
chr2 (18-94)||(24204584-24204660)
chr2 (18-94)||(25572075-25572150)
chr2 (25-94)||(12938278-12938347)
chr2 (18-92)||(33677512-33677586)
chr2 (18-91)||(11617053-11617126)
chr2 (18-79)||(28599218-28599279)
chr2 (18-91)||(35517152-35517225)
chr2 (27-94)||(9864774-9864841)
chr2 (18-94)||(6765988-6766065)
chr2 (18-94)||(26998346-26998422)
chr2 (18-64)||(5280592-5280638)
chr2 (25-91)||(9709549-9709615)
chr2 (18-94)||(11030985-11031054)
chr2 (25-94)||(40808775-40808843)
chr2 (34-94)||(7645282-7645342)
chr2 (24-94)||(16179642-16179705)
chr2 (18-94)||(32010131-32010207)
chr2 (18-94)||(32273700-32273776)
chr2 (18-92)||(8032725-8032800)
chr2 (35-94)||(18833965-18834024)
chr2 (24-94)||(4891694-4891764)
chr2 (61-94)||(44545944-44545977)
chr2 (30-94)||(28678703-28678766)
chr2 (18-94)||(30830651-30830727)
[»] chr8 (44 HSPs)
chr8 (18-91)||(34890234-34890307)
chr8 (18-91)||(36190799-36190872)
chr8 (18-76)||(30575910-30575968)
chr8 (25-91)||(43216407-43216473)
chr8 (18-79)||(3642042-3642102)
chr8 (18-91)||(8711904-8711977)
chr8 (18-91)||(31734142-31734215)
chr8 (18-94)||(2628221-2628297)
chr8 (18-94)||(4046951-4047027)
chr8 (27-94)||(5217428-5217495)
chr8 (27-94)||(26954449-26954516)
chr8 (24-91)||(35456084-35456151)
chr8 (25-91)||(2052868-2052934)
chr8 (18-79)||(7499753-7499815)
chr8 (17-79)||(35525613-35525675)
chr8 (18-91)||(7022463-7022536)
chr8 (18-91)||(7858555-7858628)
chr8 (18-91)||(26483559-26483632)
chr8 (18-91)||(28348638-28348710)
chr8 (18-91)||(41086446-41086519)
chr8 (18-94)||(16879449-16879525)
chr8 (26-94)||(29920325-29920393)
chr8 (18-77)||(8107692-8107750)
chr8 (24-91)||(13144006-13144072)
chr8 (24-91)||(15957971-15958038)
chr8 (18-73)||(24892865-24892920)
chr8 (31-94)||(44663846-44663909)
chr8 (24-94)||(17713256-17713326)
chr8 (18-91)||(34158351-34158424)
chr8 (30-94)||(8712563-8712627)
chr8 (18-94)||(27819686-27819762)
chr8 (25-79)||(13143798-13143852)
chr8 (41-94)||(24510752-24510805)
chr8 (18-94)||(8673408-8673484)
chr8 (18-94)||(8745610-8745686)
chr8 (18-94)||(41362364-41362440)
chr8 (24-79)||(16358183-16358238)
chr8 (34-94)||(33563568-33563630)
chr8 (55-94)||(39187298-39187337)
chr8 (18-88)||(25195109-25195179)
chr8 (44-94)||(28497195-28497245)
chr8 (61-94)||(25321643-25321676)
chr8 (152-208)||(3073401-3073457)
chr8 (18-94)||(4038938-4039014)
[»] scaffold0018 (1 HSPs)
scaffold0018 (17-91)||(154889-154963)
[»] scaffold0774 (1 HSPs)
scaffold0774 (18-91)||(3487-3560)
[»] scaffold0442 (1 HSPs)
scaffold0442 (18-91)||(10074-10147)
[»] scaffold0009 (2 HSPs)
scaffold0009 (18-94)||(52658-52734)
scaffold0009 (18-94)||(157823-157899)
[»] scaffold0300 (1 HSPs)
scaffold0300 (29-91)||(632-694)
[»] scaffold0132 (2 HSPs)
scaffold0132 (18-91)||(1041-1114)
scaffold0132 (18-91)||(9001-9074)
[»] scaffold0010 (1 HSPs)
scaffold0010 (18-94)||(160975-161051)
[»] scaffold1786 (1 HSPs)
scaffold1786 (35-94)||(893-952)
[»] scaffold0111 (1 HSPs)
scaffold0111 (24-94)||(40214-40284)
[»] scaffold0062 (1 HSPs)
scaffold0062 (26-72)||(44849-44895)
[»] scaffold0045 (1 HSPs)
scaffold0045 (29-79)||(77997-78047)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-84)||(160279-160345)


Alignment Details
Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 6752705 - 6752779
Alignment:
Q  20 tttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6752705 tttcctctctcttccattttctccataaccaatagccaattaaaattgtttttacatctttccatgaaacttatt 6752779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 30454815 - 30454740
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||||||||||    
T  30454815 aatttgctctctctttcattttctcaataaccaataaccaat-aaaattgtttttacatctttctataaaacttatt 30454740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 6438123 - 6438177
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6438123 tctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 6438177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 34194921 - 34194991
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||| | ||||||||||||    
T  34194921 ctctctctttcattttctcaataaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 34194991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 579229 - 579156
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| | |||||||||    
T  579229 aattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttatatcttcctataaaactt 579156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 23311684 - 23311611
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  23311684 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 23311611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35963185 - 35963258
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||||||||||||||||| ||||| |||||||||||| |||||| | |||||||||    
T  35963185 aattttctctctctttcattttctccataaccaataaccaataaaaattgtttttccatcttcctataaaactt 35963258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 50651128 - 50651055
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| |||||||||||||||||||| |||| ||||||||||||||||||| | |||||||||    
T  50651128 aattttctctctcttttattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactt 50651055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7886708 - 7886632
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| |||||| |||||    
T  7886708 aatttgctctctctttcattttctcaataactaataaccaatgaaaattgtttttacatctttctataaaatttatt 7886632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 28875450 - 28875500
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28875450 tctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 28875500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 3972315 - 3972384
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||| |||||||| | ||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  3972315 tctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccataaaacttatt 3972384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 3997563 - 3997494
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||| |||||||| | ||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  3997563 tctctcttccattttcttcctaaccaatagctaatgaaaattgtttttacatcttcccataaaacttatt 3997494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 14752299 - 14752238
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||    
T  14752299 aattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatctt 14752238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 37042508 - 37042435
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||| | |||||||||    
T  37042508 aattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactt 37042435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 2927322 - 2927398
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||  ||||| | ||||||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  2927322 aattttctctctcttctatttttttcataaccaatagccaatgaaaattatttttacatcttcccataaaacttatt 2927398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8097109 - 8097033
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| |||| ||||| ||||| |||||| |||||||||||| | ||||||||||||    
T  8097109 aatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 8097033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 11054394 - 11054330
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||| ||||| | |||||||||    
T  11054394 tctctttcattttttccataaccaatagccaatgaaaattgtttttaaatcttcctataaaactt 11054330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 46918296 - 46918228
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||||||| ||||| | ||||||||||||    
T  46918296 ctctctttcattttctcaataaccaataaccaatgaaaattgtttttagatcttcctataaaacttatt 46918228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 54464986 - 54464925
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||| ||| ||||||||||||||||||  |||||||||||||||||||    
T  54464986 aattttctctctctttcactttttccataaccaatagccaacgaaaattgtttttacatctt 54464925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 6752870 - 6752922
Alignment:
Q  142 attaataagctttgatattttcccacatattaaagaatgtagttaattttgta 194  Q
    ||||||||||||||| |||| | ||||||||||||||||||||||||||||||    
T  6752870 attaataagctttgacatttgcacacatattaaagaatgtagttaattttgta 6752922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16033078 - 16033002
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| || ||||||||||||| || ||||| |||| ||||| ||||||||||||||||||| | ||||||||||||    
T  16033078 aatttgctttctctttcattttttcaataactaataaccaatgaaaattgtttttacatcttcctataaaacttatt 16033002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 26208047 - 26208123
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| |||| ||||||||||| ||  |||||||||| ||||||||||||||||||| |||| |||||||||    
T  26208047 aattttctctttcttccattttctccacaataaatagccaatgaaaattgtttttacatcttaccatgaaacttatt 26208123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 29235229 - 29235281
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  29235229 tctctttcattttttccataaccaatagccaatgaaaattatttttacatctt 29235281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 30189609 - 30189677
Alignment:
Q  24 ctctctctttcattttct-ccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  30189609 ctctttctttcatttttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 30189677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 46711750 - 46711676
Alignment:
Q  15 tcaaatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||| ||||||||||||||| || |||||||||||||||| || |||||||||||||||| | |||||||||    
T  46711750 tcaaatttc-tctctctttcattttttc-ataaccaatagccaatgaatattgtttttacatcttcctataaaactt 46711676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 36546581 - 36546636
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||||||||| || |||||||||||||||| ||||||| |||||||||||    
T  36546581 ctctctctttcattttttctataaccaatagccaatgaaaattggttttacatctt 36546636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 36561734 - 36561679
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||||||||| || |||||||||||||||| ||||||| |||||||||||    
T  36561734 ctctctctttcattttttctataaccaatagccaatgaaaattggttttacatctt 36561679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 34722696 - 34722622
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactta 92  Q
    ||||| |||||  ||||||||| | ||||||||||||||||| |||||||||||||||||||   ||||||||||    
T  34722696 aattttctctccttttcattttttgcataaccaatagccaatgaaaattgtttttacatcttcttataaaactta 34722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 47864231 - 47864297
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||| | ||||| |||||| |||| ||||||||||||||||||| | |||||||||    
T  47864231 tctctctttcatttttttcataatcaatagtcaatgaaaattgtttttacatcttcctataaaactt 47864297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 53270275 - 53270341
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||| |||||||||||||| |||| |||||| ||||| |||||||| || ||||||    
T  53270275 tctctctttcattttttccataaccaataggcaatgaaaattattttttcatctttctatgaaactt 53270341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 3084256 - 3084199
Alignment:
Q  33 tcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaact 90  Q
    |||||||||||||||| |||| ||||| || |||||||||||||||| ||||||||||    
T  3084256 tcattttctccataacaaataaccaatgaatattgtttttacatcttcccataaaact 3084199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 6075114 - 6075175
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| | |||||||||| |||||| |||||||||||||| ||||    
T  6075114 aattttctctctctttcattttttgcataaccaatggccaatgaaaattgtttttacttctt 6075175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 7866574 - 7866513
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| || ||||||| ||||| |||||||||||||| |||| |||||||||||||||||||    
T  7866574 aattttctatctcttttattttttccataaccaatagtcaatgaaaattgtttttacatctt 7866513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 26725075 - 26725006
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||  ||||||||||||| ||||| ||||| |||||||||||||||||||  || ||||||||||    
T  26725075 tctctcttctattttctccataatcaataaccaatgaaaattgtttttacatcttctcagaaaacttatt 26725006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 37075001 - 37075066
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||| ||||||||| || |||||||||||||||| |||||||| |||||||||| | |||||||||    
T  37075001 ctctttttcattttttctataaccaatagccaatgaaaattgtgtttacatcttcctataaaactt 37075066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 21214268 - 21214344
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| ||| |||||||| |||| |||   ||||| ||||||||||||||||||||| ||||||||||||    
T  21214268 aatttgctctcttttttattttctcaataatcaactaccaatgaaaattgtttttacatctttctataaaacttatt 21214344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 38674903 - 38674959
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttac 74  Q
    ||||| |||||||||||||||||| ||||| |||||| |||| ||||||||||||||    
T  38674903 aattttctctctctttcattttcttcataatcaatagtcaatgaaaattgtttttac 38674959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 201
Target Start/End: Original strand, 12064782 - 12064825
Alignment:
Q  158 attttcccacatattaaagaatgtagttaattttgtattgaaaa 201  Q
    |||||| ||||||||||| |||||||||||||||||||||||||    
T  12064782 attttcacacatattaaaaaatgtagttaattttgtattgaaaa 12064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 46557292 - 46557237
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgttttta 73  Q
    ||||| |||||||||||||||| |||||||| |||||||||| |||||| ||||||    
T  46557292 aattttctctctctttcattttttccataactaatagccaatgaaaattattttta 46557237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 23910581 - 23910531
Alignment:
Q  41 tccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||||||| |||||| |||||||||||| | |||||||||    
T  23910581 tccataaccaatagccaatgaaaattatttttacatcttcctataaaactt 23910531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 31836959 - 31837025
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||| ||||||||||||| ||||||||| |||| |||||||||||| ||| || | |||||||||    
T  31836959 tctctcattcattttctccacaaccaatagtcaatgaaaattgtttttgcatattcctataaaactt 31837025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 32619902 - 32619860
Alignment:
Q  37 tttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||||||||||||| |||||| ||||||||||||    
T  32619902 tttctccataaccaatagccaatgaaaattatttttacatctt 32619860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 47867004 - 47866946
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacat 76  Q
    ||||| ||||||||| || ||||||||||| ||||||||||| ||||| ||||||||||    
T  47867004 aattttctctctcttccactttctccataatcaatagccaatgaaaatggtttttacat 47866946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 23209364 - 23209295
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||| |||||||||||||  |||| |||| ||||| |||||| ||||| |||||||| ||||||||||||    
T  23209364 tctccctttcattttctctctaactaataaccaataaaaattattttttcatctttctataaaacttatt 23209295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 36150967 - 36151028
Alignment:
Q  34 cattttctccataaccaatagccaattaaaattgt-ttttacatctttccataaaacttatt 94  Q
    |||||||||||||| ||||| ||||| |||||| | ||||||||||| ||||||||||||||    
T  36150967 cattttctccataatcaataaccaataaaaattatgttttacatcttcccataaaacttatt 36151028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 45868582 - 45868525
Alignment:
Q  33 tcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaact 90  Q
    ||||||||||| |||| |||| ||||| |||||||||||||||||||| ||| |||||    
T  45868582 tcattttctccgtaacaaataaccaatgaaaattgtttttacatctttgcatgaaact 45868525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 10114938 - 10115014
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| | |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  10114938 aatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10115014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 10252038 - 10252114
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| | |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  10252038 aatttgctctatttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10252114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 20847351 - 20847283
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||||||||| ||||  ||||| ||||||||||  ||||||| | || |||||||||    
T  20847351 ctctctttcattttctccataatcaattaccaatgaaaattgtttgcacatcttcctatgaaacttatt 20847283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22456099 - 22456023
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||| ||||| | ||||||||||||    
T  22456099 aatttgctctctttttcattttctctataatcaactaccaatcaaaattgtttttatatcttcctataaaacttatt 22456023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 22479145 - 22479069
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| |||| |||||||||||||| | ||||||||||||    
T  22479145 aatttgctctctttttcattttctctataatcaactaccaatgaaaagtgtttttacatcttcctataaaacttatt 22479069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Original strand, 47115898 - 47115958
Alignment:
Q  34 cattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||| ||||||| ||||| ||||  ||||||| |||||||||||||||||||| |||||    
T  47115898 cattttatccataatcaataaccaaagaaaattgcttttacatctttccataaaatttatt 47115958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 31126275 - 31126314
Alignment:
Q  55 ccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  31126275 ccaatgaaaattatttttacatctttccataaaacttatt 31126314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 94
Target Start/End: Original strand, 34105608 - 34105639
Alignment:
Q  63 aattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||||||||||||||||||    
T  34105608 aattgtttttacatctttccataaaacttatt 34105639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Original strand, 6752936 - 6752966
Alignment:
Q  173 aaagaatgtagttaattttgtattgaaaaaa 203  Q
    |||||||||||||||||||||||||||||||    
T  6752936 aaagaatgtagttaattttgtattgaaaaaa 6752966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 8703141 - 8703201
Alignment:
Q  17 aaatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||| || ||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||    
T  8703141 aaattttctttctctttcatttt-tccataatcaatagccaatgaaa-ttgtttttacatctt 8703201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 9055028 - 9055088
Alignment:
Q  17 aaatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||| || ||||||||||||| ||||||| ||||||||||| ||| |||||||||||||||    
T  9055028 aaattttctttctctttcatttt-tccataatcaatagccaatgaaa-ttgtttttacatctt 9055088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 31292653 - 31292710
Alignment:
Q  33 tcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaact 90  Q
    |||||||||  ||||| |||| ||||| ||||||||||||||||||| ||||| ||||    
T  31292653 tcattttctttataacaaataaccaatgaaaattgtttttacatcttcccatagaact 31292710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 10014296 - 10014372
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| | ||| |||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  10014296 aatttactctattttttattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 10014372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 40575391 - 40575347
Alignment:
Q  152 tttgatattttcccacatattaaagaatgtagttaattttgtatt 196  Q
    |||||||||||| |||||||||||  || ||||||||||||||||    
T  40575391 tttgatattttcacacatattaaaatatatagttaattttgtatt 40575347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 17351417 - 17351493
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17351417 aattttctctctatgtcattttctccataatcaatagccaattaaaattgtttttacatctttccataaaacttatt 17351493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 42273683 - 42273737
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  42273683 tctctctttcattttctccataaccaatagccaatgaaaattgtttttacatctt 42273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 6686413 - 6686486
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  6686413 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 6686486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 11262016 - 11261943
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  11262016 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 11261943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 20644051 - 20644116
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  20644051 ctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 20644116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 4463389 - 4463465
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||||||| ||||||||||||||||| | ||||||||||||||||||| |||| || ||||||    
T  4463389 aattttctctctctttcattttttccataaccaatagccagtgaaaattgtttttacatcttcccatgaagcttatt 4463465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 19413178 - 19413246
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| ||||||||||||||    
T  19413178 ctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccataaaacttatt 19413246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 37522721 - 37522648
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||| | |||||||||    
T  37522721 aattttctctgtctttcattttttccataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 37522648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 38130248 - 38130175
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||| ||||||||| || | |||||||||    
T  38130248 aattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatattcctataaaactt 38130175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 43590094 - 43590021
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||  | |||||||||    
T  43590094 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactt 43590021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 5369155 - 5369087
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||| | ||||||||||||    
T  5369155 ctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 5369087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 12912426 - 12912350
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||||||| || | |||||||| ||||| ||||||||||||||||||| | ||||||||||||    
T  12912426 aatttgctctctctttcattttttcaacaaccaataaccaatgaaaattgtttttacatcttcctataaaacttatt 12912350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 39505364 - 39505289
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| |||||||| ||| |||||| ||||||||||||||||||| ||||||||||||||    
T  39505364 aattttctctctcttttatttt-tccataacgaattgccaatgaaaattgtttttacatcttaccataaaacttatt 39505289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 104340 - 104273
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||| | |||||| |||||| ||| ||||||||||||||||||||| |||||||||    
T  104340 ctctctctttcatttttttcataactaatagctaatgaaaattgtttttacatctttctataaaactt 104273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 10154060 - 10153985
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttat 93  Q
    ||||| || |||||||||||||||| || ||||||| ||||| ||||||||||||||||||| | |||||||||||    
T  10154060 aatttgctatctctttcattttctcaatgaccaataaccaatgaaaattgtttttacatcttcctataaaacttat 10153985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 12792902 - 12792852
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttac 74  Q
    |||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  12792902 ctctctctttcattttctccataaccaatagccaatgaaaattgtctttac 12792852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 32111031 - 32111092
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| ||||||||||||| || |||||||||||||| |||| |||||||||||||||||||    
T  32111031 aattttctctctctttcatattttccataaccaatagtcaatgaaaattgtttttacatctt 32111092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 37562894 - 37562821
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||| ||||||| ||| ||||||||||||||||||| | |||||||||    
T  37562894 aattttctctgtctttcattttttccataaacaatagctaatgaaaattgtttttacatcttcctataaaactt 37562821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 38280876 - 38280949
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||| ||||| ||||| |||||||||||||||| || | |||||||||    
T  38280876 aattttctctctctttcattttttccataatcaataaccaatgaaaattgtttttacattttcctataaaactt 38280949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 25840893 - 25840969
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| ||||||| |||| | |||| ||||||||||||||||||| |||| |||||||||    
T  25840893 aattttctctctcttttattttttccataaacaattgtcaatgaaaattgtttttacatcttcccatgaaacttatt 25840969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 6391907 - 6391974
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||| ||||| |||| ||||| ||| ||||||||||||||||| || |||||||||    
T  6391907 tctctttcattttctctataactaataaccaataaaagttgtttttacatctttctatgaaacttatt 6391974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 20039131 - 20039202
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaac 89  Q
    ||||| || ||||||||||||| | ||||||||||||||||| ||||||| ||||||||||| | |||||||    
T  20039131 aattttctatctctttcatttttttcataaccaatagccaataaaaattggttttacatcttcctataaaac 20039202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 42104370 - 42104307
Alignment:
Q  28 ctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||||||||||||||  |||||||||| ||||||||||||||||||| |||| ||||||    
T  42104370 ctcttccattttctccataattaatagccaatgaaaattgtttttacatcttcccatgaaactt 42104307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 9957543 - 9957490
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||||||||||    
T  9957543 tctctctttcattttttc-ataaccaatagccaatgaaaattgtttttacatctt 9957490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 12730000 - 12729950
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttac 74  Q
    |||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  12730000 ctctctctctcattttctccataaccaatagccaatgaaaattgtctttac 12729950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 32017739 - 32017803
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaac 89  Q
    ||||||||||| |||| |||||||||||||| |||| ||||||||||||||||||| | |||||||    
T  32017739 ctctctctttcgtttt-tccataaccaatagacaatgaaaattgtttttacatcttcctataaaac 32017803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 34425360 - 34425432
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| ||||||| ||||||||||| |||||||||||||||| || | |||||||||    
T  34425360 aattttctctctcttttatttt-tccataatcaatagccaatgaaaattgtttttacatattcctataaaactt 34425432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 1497252 - 1497308
Alignment:
Q  152 tttgatattttcccacatattaaagaatgtagttaattttgtattgaaaaaagaaat 208  Q
    |||||||||||| ||||||||||| ||| ||||||||||||||||| ||| ||||||    
T  1497252 tttgatattttcacacatattaaaaaatatagttaattttgtattggaaagagaaat 1497308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 23233446 - 23233498
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacat 76  Q
    |||||||||||||||||||||||||||||||  ||| |||| |||||||||||    
T  23233446 ctctctctttcattttctccataaccaatagttaataaaaactgtttttacat 23233498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 2002244 - 2002189
Alignment:
Q  39 tctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| || || ||||| | ||||||||||||||||||||||||||||||||    
T  2002244 tctccataatcattaaccaataagaattgtttttacatctttccataaaacttatt 2002189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 43454455 - 43454380
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttat 93  Q
    ||||| |||||||||| ||||||| | ||||||||||  ||| |||||||||||||||| || | |||||||||||    
T  43454455 aattttctctctcttttattttcttcttaaccaatagtaaatgaaaattgtttttacatattcctataaaacttat 43454380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 5984214 - 5984164
Alignment:
Q  44 ataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||| |||| |||||||||||||||| |||| ||||||||||||    
T  5984214 ataaccaatagtcaatgaaaattgtttttacatatttctataaaacttatt 5984164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 30893382 - 30893312
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||||||||| || | ||||| || ||||| |||| ||||| |||||| |||||||||||||||||||||    
T  30893382 aatttcctctccctctgattttatctataacaaataaccaataaaaattatttttacatctttccataaaa 30893312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8506466 - 8506536
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| |||||||||||||| ||||||      |||| ||||||||||||||||||||| ||||||||||||    
T  8506466 aatttgctctatctttcattttctcaataacc------caatgaaaattgtttttacatctttctataaaacttatt 8506536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 3463947 - 3463871
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||| ||||| | ||||||||||||    
T  3463947 aatttgctctctttttcattttctctataatcaactaccaataaaaattgtttttatatcttcctataaaacttatt 3463871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8146752 - 8146828
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||| || ||||||||||||||||  ||| ||||| ||||||  ||||| || |||||||||||||||||    
T  8146752 aatttgctctccctctcattttctccataacagataaccaatgaaaatttattttaaatttttccataaaacttatt 8146828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Original strand, 8225497 - 8225544
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgttttt 72  Q
    ||||||||||||||| ||||||||||||||||||| ||| || |||||    
T  8225497 tctctctttcattttttccataaccaatagccaatgaaattttttttt 8225544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 24439616 - 24439675
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||  | |||||||| | |||||||||||||||||||||| |||||||||    
T  24439616 attttttccataataattagccaatgataattgtttttacatctttccatgaaacttatt 24439675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8959669 - 8959745
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| || ||||||||| |||| |||    |||| ||||||||||||||||||| | ||||||||||||    
T  8959669 aatttgctctcttttccattttctctataatcaactatcaatgaaaattgtttttacatcttcctataaaacttatt 8959745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 7275007 - 7274931
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  7275007 aattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttatt 7274931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 12461561 - 12461491
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| || ||||||  ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  12461561 aattttctgtctcttctattttctccataaccaatagccaatgaaaattgtttttacatctttctataaaa 12461491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 21542458 - 21542520
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  21542458 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactt 21542520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 11082377 - 11082304
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||  | |||||||||    
T  11082377 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactt 11082304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 30794324 - 30794248
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||  ||||||||||| ||||||||||||| |||| |||||||||||||| | ||||||||||||    
T  30794324 aattttctctctcttctattttctccatcaccaatagccaatgaaaaatgtttttacatcttcctataaaacttatt 30794248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 34177767 - 34177713
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatct 78  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  34177767 ctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 34177713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3095851 - 3095778
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| | ||||||||| ||||||| ||||||||||| ||||||||||||||||||| | |||||||||    
T  3095851 aattttctctttatttcattttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaactt 3095778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 21963989 - 21964058
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||| ||||||||||| | ||||| ||||| |||||| |||||||||||||||||||||||||||    
T  21963989 tctcttttttattttctccatgatcaataaccaataaaaattatttttacatctttccataaaacttatt 21964058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 92
Target Start/End: Complemental strand, 5881872 - 5881810
Alignment:
Q  30 ctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactta 92  Q
    ||||||||||||| ||||  |||| ||||||||||||||||||||||||||| || |||||||    
T  5881872 ctttcattttctctataattaataaccaattaaaattgtttttacatctttctatgaaactta 5881810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 35129187 - 35129113
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgttt-ttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||| |||||||||| ||||||||| | |||||||||    
T  35129187 aattttctctttctttcattttttccataaccaataaccaatgaaaattgtttattacatcttcctataaaactt 35129113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 4032014 - 4032090
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  4032014 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttccgataaaacttatt 4032090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16013564 - 16013488
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  16013564 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16013488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 16524419 - 16524482
Alignment:
Q  31 tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  16524419 tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 16524482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 31887246 - 31887177
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||| |||||||||||||    || ||||| |||||| ||||||||||||||||| |||||||||    
T  31887246 tctcttttttattttctccataatttttaaccaataaaaattatttttacatctttccatgaaacttatt 31887177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 4987970 - 4988046
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||  |||||||||||| |||| |||   ||||| |||||| |||||||||||| | ||||||||||||    
T  4987970 aatttgctctcattttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 4988046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 57; Significance: 6e-24; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 35310867 - 35310791
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  35310867 aattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatctttccatgaaacttatt 35310791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 20716207 - 20716280
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  20716207 aattttctcactctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactt 20716280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 1585472 - 1585396
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||||||||||| ||||||||||| ||||||||||| |||||||||||| |||||||||    
T  1585472 aattttctctctcttccattttctccataatcaatagccaataaaaattgttttaacatctttccatgaaacttatt 1585396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 29203533 - 29203603
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  29203533 aattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 29203603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 4058742 - 4058815
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||| | |||||||||    
T  4058742 aattttctctctctttcattttttccataaccaataaccaatgaaaattgtttttacatcttcctataaaactt 4058815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 47867906 - 47867979
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  47867906 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 47867979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 5483403 - 5483327
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||| | || |||||||||    
T  5483403 aattttctctctcttccattttctccataaccagtagccaatgaaaattgtttttacatcttcctattaaacttatt 5483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 25297330 - 25297271
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||    
T  25297330 attttctccataatcaatagccaatgaaaattgtttttacatctttccatgaaacttatt 25297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 2229285 - 2229347
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  2229285 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactt 2229347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 10069735 - 10069797
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  10069735 tctttcactttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactt 10069797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 20281629 - 20281691
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  20281629 tctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 20281691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 26916363 - 26916425
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  26916363 tctttcattttttccataaccaatagccaataaaaattgtttttacatcttcctataaaactt 26916425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 16604971 - 16604898
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||||| |||||||||| ||||||||||| ||||||| | |||||||||    
T  16604971 aattttctctctctttcattttttccataactaatagccaatgaaaattgttttaacatcttcctataaaactt 16604898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 24940392 - 24940453
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  24940392 aattttctctctctttcattttctccataaccaataaccaacgaaaattgtttttacatctt 24940453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 42915556 - 42915633
Alignment:
Q  18 aatttcctctctctttcattttct-ccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| | ||||||||||| |||||| |||||||||||||||||||||||| |||||||||    
T  42915556 aattttctctctcttttatttttttccataaccaattgccaatgaaaattgtttttacatctttccatgaaacttatt 42915633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 56318195 - 56318134
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||    
T  56318195 aattttctctctctttcattttttccataaccaatagctaatgaaaattgtttttacatctt 56318134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8178364 - 8178288
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| |||||||||| |||||  ||||||||||||||||||   ||||||||||||    
T  8178364 aatttgctctctctttcattttctcaataaccaataaccaatacaaattgtttttacatcttcttataaaacttatt 8178288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 35529706 - 35529762
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttc 81  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||    
T  35529706 tctctctttcattttttccataaccaatacccaatgaaaattgtttttacatctttc 35529762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 46070639 - 46070571
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||| |||||||| | ||||| ||||||||||||||||||| | ||||||||||||    
T  46070639 ctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 46070571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 50145771 - 50145839
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||| |||||||||||| | ||||||||||| |||||||| |||||||||| ||||||||||||||    
T  50145771 ctctcttccattttctccattatcaatagccaatgaaaattgtgtttacatcttcccataaaacttatt 50145839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 12002756 - 12002693
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaact 90  Q
    |||||| || |||||||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  12002756 tctcttccagtttctccataaccaatggccaataaaaattgtttttacatctttccatgaaact 12002693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Complemental strand, 47516315 - 47516240
Alignment:
Q  19 atttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||| ||||||||||||||||||| |||||||| | ||||| |||||||||||||| |||| | ||||||||||||    
T  47516315 atttgctctctctttcattttctcaataaccaacaaccaatgaaaattgtttttacttcttcctataaaacttatt 47516240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7654644 - 7654717
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||| | |||||||||    
T  7654644 aattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttatatcttcctataaaactt 7654717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 8013207 - 8013138
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||||| || || |||| ||||| ||||||||||||||||||||| || |||||||||    
T  8013207 tctctctttcattttctctatgactaataaccaataaaaattgtttttacatctttctatgaaacttatt 8013138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 8683424 - 8683355
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| ||||| |||||||||||| |||||| |||||| ||||||||| ||||||| |||||||||    
T  8683424 tctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatgaaacttatt 8683355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14332787 - 14332860
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| | |||||||||| |||||| ||||||||||||||||||| | |||||||||    
T  14332787 aattttctctttctttcatttttttcataaccaatggccaataaaaattgtttttacatcttcctataaaactt 14332860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 17799244 - 17799187
Alignment:
Q  33 tcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaact 90  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||    
T  17799244 tcattttctccataacaaataaccaatgaaaattgtttttacatcttcccataaaact 17799187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 48793746 - 48793677
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| ||||| | |||||||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  48793746 tctctcttttatttttttcataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttatt 48793677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 5841904 - 5841828
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||||||| || |||||||||| ||||| |||||| |||||||||||| | |||||| |||||    
T  5841904 aatttgctctctctttcattttttcaataaccaataaccaatgaaaattatttttacatcttcctataaaatttatt 5841828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 17794666 - 17794590
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| || ||| ||||||| ||||||||||| ||||||||||||||||||| | |||||| |||||    
T  17794666 aattttctctctcttccaatttttccataatcaatagccaatgaaaattgtttttacatcttcctataaaatttatt 17794590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 41414728 - 41414663
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||||||||||||| | |||||||||    
T  41414728 tctctctttcattttttc-ataatcaatagccaataaaaattgtttttacatcttcctataaaactt 41414663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 32280111 - 32280070
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacat 76  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  32280111 attttctccataatcaatagccaattaaaattgtttttacat 32280070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 39078184 - 39078245
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| || ||||||||||||| || ||||| |||||||||| |||||||||||||||||||    
T  39078184 aattttctttctctttcattttttcaataactaatagccaatgaaaattgtttttacatctt 39078245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 5815496 - 5815572
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| | |||| ||||||| |||||| |||| |||||| ||||||||||||  |||||||||||||    
T  5815496 aattttctctctcttcctttttttccataatcaatagtcaataaaaattatttttacatcttctcataaaacttatt 5815572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 32323387 - 32323311
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| ||||||||| |||| |||  | |||| ||||||||||||||||||| ||||||| ||||||    
T  32323387 aattttctctctcttccattttctcaataatcaagcgtcaatgaaaattgtttttacatcttcccataaatcttatt 32323311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 88
Target Start/End: Complemental strand, 17186909 - 17186850
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||||||||| ||||||||||||||||||| ||| || |||||||||||| | ||||||    
T  17186909 tctttcattttttccataaccaatagccaatgaaacttatttttacatcttcctataaaa 17186850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 94
Target Start/End: Original strand, 40553809 - 40553872
Alignment:
Q  31 tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||| |||| ||||| ||| ||||||||||||||||| || |||||||||    
T  40553809 tttcactttctccataactaataaccaatgaaacttgtttttacatctttctatgaaacttatt 40553872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 28142747 - 28142671
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||||||| | | ||||||||||||    
T  28142747 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcctcctataaaacttatt 28142671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 37911911 - 37911987
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| ||| |||||||| |||| |||   ||||| |||||||||||||||| |||| ||||||||||||    
T  37911911 aatttgctctcttttttattttctctataatcaactaccaatgaaaattgtttttacatatttctataaaacttatt 37911987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 47467679 - 47467623
Alignment:
Q  152 tttgatattttcccacatattaaagaatgtagttaattttgtattgaaaaaagaaat 208  Q
    ||||| |||||| || |||| ||  ||||||||||||||||||||||||||||||||    
T  47467679 tttgacattttcacaaatatcaagaaatgtagttaattttgtattgaaaaaagaaat 47467623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 52535710 - 52535654
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttac 74  Q
    ||||| |||||||||||| ||| || |||||||||||||||| |||||| |||||||    
T  52535710 aattttctctctctttcactttttctataaccaatagccaatgaaaattatttttac 52535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 55580702 - 55580758
Alignment:
Q  24 ctctctctttcattttct-ccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||| ||||||||||| | ||||||| |||||||||| |||||||||||||||||||    
T  55580702 ctctttctttcatttttttccataactaatagccaatgaaaattgtttttacatctt 55580758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 23978240 - 23978169
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaac 89  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||||||||| | |||||||    
T  23978240 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaac 23978169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 28669125 - 28669055
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaac 89  Q
    ||||| |||||||||||||||| || ||||| |||| ||||| |||||||||||||||| || | |||||||    
T  28669125 aattttctctctctttcattttttc-ataactaataaccaatgaaaattgtttttacattttcctataaaac 28669055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 30012035 - 30011976
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||  | || ||||| | |||||||||||||||||||||| |||||||||    
T  30012035 attttctccataataattaaccaatgataattgtttttacatctttccatgaaacttatt 30011976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 5064780 - 5064704
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   | ||| ||||||||||||||||||| |  |||||||||||    
T  5064780 aatttactctctttttcattttctctataatcaactactaatgaaaattgtttttacatcttcctttaaaacttatt 5064704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 19351899 - 19351951
Alignment:
Q  43 cataaccaatagccaattaaaattgttttt-acatctttccataaaacttatt 94  Q
    |||||| |||||||||| |||||||||||| ||||||| |||| |||||||||    
T  19351899 cataactaatagccaatgaaaattgtttttaacatcttcccatgaaacttatt 19351951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 2e-23; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 39555712 - 39555645
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  39555712 ctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactt 39555645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 16854176 - 16854242
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| | |||||||||    
T  16854176 tctctctttcattttctccataaccaatagccaataaaaattgtttttacaccttccaataaaactt 16854242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 28120887 - 28120817
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  28120887 aattttctctctctttcattttttccataatcaatagccaatgaaaattgtttttacatcttcccataaaa 28120817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 32318686 - 32318616
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| | ||||||||||||    
T  32318686 ctctctctctcattttctccataaccaataaccaatgaaaattgtttttacatcttccaataaaacttatt 32318616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 2126067 - 2126140
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  2126067 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 2126140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 6785485 - 6785546
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  6785485 aattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatctt 6785546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 10558881 - 10558812
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||||||||| |||||||| |||||    
T  10558881 tctctcttccattttctccataatcaatagccaatgaaaattgtttttacatcttcccataaaaattatt 10558812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 15959772 - 15959699
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  15959772 aattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 15959699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 32624137 - 32624064
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| | |||||||||    
T  32624137 aattttctctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactt 32624064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 5858503 - 5858427
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||||| | ||||||||||||    
T  5858503 aatttgctctctgtttcattttctcaataaccaatagccaatgaaaattgtttttatatcttcctataaaacttatt 5858427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 90
Target Start/End: Complemental strand, 6787116 - 6787050
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaact 90  Q
    |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| | ||||||||    
T  6787116 ctctctctttcattttttccataaccaatagccaataaaaattatttttacatcttcctataaaact 6787050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 42965946 - 42965877
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  42965946 aattttctctctctttcatttt-tccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 42965877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 12449099 - 12449026
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| | |||||||||    
T  12449099 aattttctctctctttgattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactt 12449026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 33369587 - 33369640
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatct 78  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  33369587 tctctctttcattttttccataaccaatagccaatgaaaattgtttttacatct 33369640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 47014623 - 47014550
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||||| || | |||||||||    
T  47014623 aattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacattttcctataaaactt 47014550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 3076324 - 3076400
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||| |||| ||||| |||||||||||| |||||| |||||| |||||||||||| ||||||||||||||    
T  3076324 aattttctctcacttttattttttccataaccaattgccaatgaaaattatttttacatcttcccataaaacttatt 3076400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 3861815 - 3861751
Alignment:
Q  30 ctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||| | ||||| ||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3861815 ctttcatttttttcataatcaatagccaatgaaaattgtttttacatctttcaataaaacttatt 3861751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 5950468 - 5950544
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||||||| || |||||||||  ||||| ||||||||||||||||||| | ||||||||||||    
T  5950468 aatttgctctctctttcattttttcaataaccaatgaccaatgaaaattgtttttacatcttcctataaaacttatt 5950544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 24190498 - 24190558
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatct 78  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  24190498 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatct 24190558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24728759 - 24728683
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| ||||||| |||| |||||| ||||||||||||||||||| |||| |||||||||    
T  24728759 aattttctctctcttttattttttccataatcaattgccaatgaaaattgtttttacatcttcccatgaaacttatt 24728683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 37735515 - 37735439
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| || |||||||||||||| ||||||||||| |||||||||||||| |||| |||| |||||||||    
T  37735515 aattttctctcttttccattttctccataatcaatagccaataaaaattgtttttacttcttcccatgaaacttatt 37735439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 39932704 - 39932628
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||||||||| ||||||||||||| ||||||||||||| |||||   ||||||||||||    
T  39932704 aattttctctctcttttattttctccatgaccaatagccaataaaaattgtttttatatcttcttataaaacttatt 39932628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 30221771 - 30221830
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||    
T  30221771 attttctccataaccaatatccaataaaaaatgtttttacatcttcccataaaacttatt 30221830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 7876074 - 7876004
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| |||||||||| ||||| |||||||||||||| |||| |||||| |||||||||||||| ||||||    
T  7876074 aattttctctctcttttattttttccataaccaatagtcaataaaaattatttttacatctttctataaaa 7876004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 13136678 - 13136624
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  13136678 tctctctttcattttttccataaccaatagccaatggaaattgtttttacatctt 13136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 33431595 - 33431661
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| |||| | | |||||||||    
T  33431595 tctctctttcattttctctataaccaatagccaatgaaaattgtttttccatcctcctataaaactt 33431661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 43667428 - 43667362
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||||| |||| | |||||||||    
T  43667428 tctctctttcattttttccataaccaatggccaatgaaaattgtttttacgtcttcctataaaactt 43667362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 298801 - 298732
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaa 87  Q
    ||||| |||| |||| |||||||||||||| |||||||||||||||||  |||||||||||| |||||||    
T  298801 aattttctctttcttccattttctccataatcaatagccaattaaaataatttttacatcttcccataaa 298732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 6786875 - 6786928
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||    
T  6786875 ctctctttcattttttccataaccaatagccaatgaaaattgtgtttacatctt 6786928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 94
Target Start/End: Original strand, 16688176 - 16688241
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||| |||||||| | ||||| ||||||||||||||||||| | ||||||||||||    
T  16688176 tctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 16688241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 32983302 - 32983242
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  32983302 aattttctctctctttcattttttccataaccaat-gccaatgaaaattgtttttacatctt 32983242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 45226167 - 45226240
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| || ||||||||||||| |||||||||||||| |||| |||||||||||||| |||| | |||||||||    
T  45226167 aattttctatctctttcattttttccataaccaatagtcaatgaaaattgtttttacgtcttcctataaaactt 45226240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 47600171 - 47600098
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| || ||||||||||||| | ||||| ||||||||||| ||||||||||||||||||| | |||||||||    
T  47600171 aattttctttctctttcatttttttcataaacaatagccaatgaaaattgtttttacatcttcctataaaactt 47600098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 50369991 - 50370063
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| || ||||||||||||||||  |||||||||||||||||| | |||||||||    
T  50369991 aattttctctctctttcattttttc-ataaccaatagccaatagaaattgtttttacatcttcctataaaactt 50370063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 23392298 - 23392222
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| |||| ||||||||||||||||||||| |||| |||||| |||||| || |||| ||||||||||||    
T  23392298 aattttctctttcttccattttctccataaccaatagtcaatgaaaattatttttatatttttctataaaacttatt 23392222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 35366335 - 35366259
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| || ||||| ||||||  || |||||||||| ||||||||||||||||||||||||||| |||||| |||||    
T  35366335 aatttgctatctctatcatttgatcaataaccaataaccaattaaaattgtttttacatctttctataaaatttatt 35366259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 37538838 - 37538914
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||| ||||||||||||||| |||||||| | ||||| |||||||| |||||||||| | ||||||||||||    
T  37538838 aatttgctccctctttcattttctcgataaccaacaaccaatgaaaattgtctttacatcttcctataaaacttatt 37538914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 44148951 - 44148892
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  44148951 attttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttatt 44148892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35691421 - 35691495
Alignment:
Q  18 aatttcctctctctttcattttct-ccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||  | |||||||||    
T  35691421 aattttctctttctttcatttttttccataaccaatagccaataaaaattgtttttacatctccctataaaactt 35691495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 46543018 - 46543072
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||    
T  46543018 tctctctttcattttctccacaaccaatagccaatggaaattgttttttcatctt 46543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3875153 - 3875076
Alignment:
Q  18 aatttcctctctctttcattttctccataacca----atagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||||||    ||||||||| |||||||||||||||| || | |||||||||    
T  3875153 aattttctctctctttcattttttccataaccaatatatagccaataaaaattgtttttacatattcctataaaactt 3875076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 91
Target Start/End: Original strand, 11241073 - 11241129
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||||||||||||||||||| ||||||| ||||||||||| | |||||||||    
T  11241073 attttttccataaccaatagccaatgaaaattggttttacatcttcctataaaactt 11241129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 28016871 - 28016807
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaac 89  Q
    ||||||||| ||||| |  |||||||||||||||| ||||||||||||||||||| | |||||||    
T  28016871 tctctcttttattttttttataaccaatagccaatgaaaattgtttttacatcttcctataaaac 28016807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 34102105 - 34102049
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttac 74  Q
    ||||| |||||||||||| |||||| |||||||||| ||||| ||||||||||||||    
T  34102105 aatttgctctctctttcactttctcaataaccaataaccaatgaaaattgtttttac 34102049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 43765323 - 43765399
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| || |||||| |||||||| |||||| |||| ||||| |||| |||||||||||||| | ||||||||||||    
T  43765323 aattttctttctcttccattttctgcataacaaataaccaatgaaaaatgtttttacatcttcctataaaacttatt 43765399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 46818621 - 46818561
Alignment:
Q  31 tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||||| | |||||||| ||||||||||||| ||||| | |||||||||    
T  46818621 tttcattttctccataactattagccaatgaaaattgtttttatatcttcctataaaactt 46818561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 88
Target Start/End: Original strand, 41063777 - 41063840
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||||||| |||||||| ||||| |||| ||||| |||||| |||||||||||||| ||||||    
T  41063777 tctctctttgattttctcaataacaaataaccaatgaaaattatttttacatctttctataaaa 41063840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 52984968 - 52985038
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||  ||||| ||| ||| ||||||||||| ||||||||||||||||||| || | |||||||||    
T  52984968 ctctctcttctattttatccctaatcaatagccaatgaaaattgtttttacatcttcccgtgaaacttatt 52985038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 2246146 - 2246070
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| || |||| ||| ||| |||||||||| |||||| ||||||||| || | ||||||||||||    
T  2246146 aattttctctctcttccactttccccacaacgaatagccaatgaaaattctttttacatattcctataaaacttatt 2246070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 51339021 - 51338953
Alignment:
Q  27 tctctttca-ttttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| ||||||| ||||| |||| ||||| ||||||| ||||||||||||| || |||||||||    
T  51339021 tctctttcaattttctctataactaataaccaatgaaaattgattttacatctttctatgaaacttatt 51338953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 52841565 - 52841501
Alignment:
Q  30 ctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||| | ||||| |||| ||||| ||||||||||| ||||||||| || |||||||||    
T  52841565 ctttcattttccctataactaataaccaatgaaaattgttttaacatctttctatgaaacttatt 52841501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 8889822 - 8889753
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| |||||||||        ||||||||||||||||||| | ||||||||||||    
T  8889822 aattttctctctctttcattttctcaataaccaatg-------aaaattgtttttacatcttcctataaaacttatt 8889753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 23873955 - 23873886
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||| |||||||||||||    || ||||| |||||| ||||||||||||||||| |||||||||    
T  23873955 tctcttttttattttctccataatttttaaccaatgaaaattatttttacatctttccatgaaacttatt 23873886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 40718707 - 40718764
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttaca 75  Q
    ||||| |||| ||||||||||| || || ||||||||||||| |||||||||| ||||    
T  40718707 aattttctctttctttcattttttctattaccaatagccaatgaaaattgtttctaca 40718764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 42724123 - 42724184
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| ||||| || ||||||||| |||||| |||| | ||| |||||||||||||||||||    
T  42724123 aatttgctctccctatcattttcttcataacaaataactaataaaaattgtttttacatctt 42724184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 7397735 - 7397811
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| | |||||||||||| |||| |||   ||||| ||||||||||||||||||| | |||||| |||||    
T  7397735 aatttgctctttttttcattttctctataatcaaataccaatgaaaattgtttttacatcttcctataaaatttatt 7397811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 13351722 - 13351782
Alignment:
Q  31 tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||| |||| |||   ||||| ||||||||||||||||||| | |||||||||    
T  13351722 tttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaactt 13351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 15912227 - 15912303
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||  ||||||||||||  ||| ||| |  |||| ||||||||||||||||||| | ||||||||||||    
T  15912227 aatttgctctccttttcattttctctgtaatcaacaatcaatgaaaattgtttttacatcttcctataaaacttatt 15912303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 30701517 - 30701441
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| |||||| |||| ||||||| | ||||||||||||    
T  30701517 aatttgctctctttttcattttctctataatcaactaccaatgaaaattattttcacatcttcctataaaacttatt 30701441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 6191081 - 6191147
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  6191081 tctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 6191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35923281 - 35923354
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  35923281 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactt 35923354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14805899 - 14805972
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  14805899 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 14805972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 15252893 - 15252966
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  15252893 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 15252966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 25737758 - 25737685
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  25737758 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 25737685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 22632118 - 22632194
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||    
T  22632118 aattttctctctcttccattttttccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttatt 22632194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 46760382 - 46760315
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  46760382 ctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 46760315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 18102567 - 18102632
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||||||||||| | |||||||||    
T  18102567 ctctctttcattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactt 18102632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 20123811 - 20123738
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| || ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| | |||||||||    
T  20123811 aattttctttctctttcattttttccataagcaatagccaatgaaaattgtttttacatcttgctataaaactt 20123738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 25944605 - 25944678
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| | |||||||||    
T  25944605 aattttctctctcttttattttttccataaccaatggccaatgaaaattgtttttacatcttcctataaaactt 25944678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 45485984 - 45486057
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| |||||| |||||||||||| | |||||||||    
T  45485984 aattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactt 45486057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 4069041 - 4069105
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||| |||||||||||||||||||| ||||| |||||| |||||||||||||| |||||||||    
T  4069041 tctcttccattttctccataaccaataaccaatgaaaattctttttacatctttctataaaactt 4069105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 4910757 - 4910691
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||| ||||||| ||||||||||| |||||| |||||||||||| | |||||||||    
T  4910757 tctctctttcattttttccataatcaatagccaatgaaaattatttttacatcttcctataaaactt 4910691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 19912900 - 19912827
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||| ||||| |||||||||||||||| || | |||||||||    
T  19912900 aattttctctttctttcattttttccataaccaataaccaatgaaaattgtttttacattttactataaaactt 19912827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 48413754 - 48413823
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||  |||||||||||||||||||| |||| |||||||||||| ||||||  |||||||||||||    
T  48413754 tctctcttctattttctccataaccaatagtcaatgaaaattgtttttgcatcttctcataaaacttatt 48413823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 2610690 - 2610630
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaa 87  Q
    |||||| |||||||||||||||||||||||||  |||| |||||||||||||||| |||||    
T  2610690 tctcttccattttctccataaccaatagccaaagaaaaatgtttttacatctttctataaa 2610630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 15995756 - 15995824
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||| |||||||| ||||||||||| |||||  ||||| ||||||||||||||||| |||||||||    
T  15995756 ctctcttccattttcttcataaccaataaccaatggaaattatttttacatctttccatgaaacttatt 15995824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 38260345 - 38260421
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| ||||  |||| ||||| |||||| |||||||| ||||| ||||||||||||    
T  38260345 aatttgctctctctttcattttctcaataataaataaccaatgaaaattatttttacaactttctataaaacttatt 38260421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 47779633 - 47779709
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| ||||| ||||| |||||||||| | |||||| ||||||||||||||||||| |||| |||||||||    
T  47779633 aattttctctttcttttattttttccataaccagttgccaatgaaaattgtttttacatcttcccatgaaacttatt 47779709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 35068962 - 35068907
Alignment:
Q  36 ttttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| | |||||||||    
T  35068962 ttttctctataaccaatagctaattaaaattgtttttacatcttcctataaaactt 35068907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 44682925 - 44682982
Alignment:
Q  37 tttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||||| |||| |||||||||||||||||||  ||| |||||||||    
T  44682925 tttctccataaccaatagtcaatgaaaattgtttttacatcttcgcatcaaacttatt 44682982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 47557732 - 47557671
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| || ||||||||||||| |||||||  |||||||||| |||||||||||||||||||    
T  47557732 aattttctttctctttcattttttccataattaatagccaatgaaaattgtttttacatctt 47557671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 14574601 - 14574669
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||| |||||||| |||||||||||| ||||  ||||| |||||||||||| |||| |||||||||    
T  14574601 ctctcttccattttcttcataaccaatagacaatggaaattatttttacatcttcccatgaaacttatt 14574669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 12632469 - 12632414
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||| ||||| |||| | |||||||||||| |||||||||||||||||||    
T  12632469 ctctctcttttattttttccacagccaatagccaatgaaaattgtttttacatctt 12632414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Complemental strand, 24151712 - 24151638
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttat 93  Q
    ||||| ||||||||||| ||||||| ||||||||||  || | ||||||||||||||||||| | |||||||||||    
T  24151712 aatttgctctctctttc-ttttctcaataaccaataatcagtgaaaattgtttttacatcttcctataaaacttat 24151638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 33153080 - 33153139
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||| || || ||||| | |||||||||||||||||||||||||| |||||    
T  33153080 attttctccataatcattaaccaataagaattgtttttacatctttccataaaatttatt 33153139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 4237837 - 4237785
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||| |||||||| | ||| |||||||||||||||||| ||||||||||||    
T  4237837 tctcttccattttcttcctaatcaatagccaattaaaattatttttacatctt 4237785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 9158128 - 9158191
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||| || ||||||||| |||||  ||||||||||||||||||| | |||||||||    
T  9158128 tctctttcattttttc-ataaccaatggccaaagaaaattgtttttacatcttcctataaaactt 9158191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 94
Target Start/End: Original strand, 29713226 - 29713294
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||| ||||  |||| ||||| ||||||||||||||| ||||| || ||| |||||    
T  29713226 ctctctttcattttctctataattaatatccaatgaaaattgtttttacaactttctatgaaagttatt 29713294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 39170563 - 39170639
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| || |||||||||||||||| |||| ||||  | ||| |||||||||||||||||||   ||||||||||||    
T  39170563 aatttgctatctctttcattttctcaataatcaatgacaaatgaaaattgtttttacatcttcgtataaaacttatt 39170639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 10248594 - 10248633
Alignment:
Q  55 ccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  10248594 ccaatgaaaattgtttttacatctttctataaaacttatt 10248633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 16917525 - 16917576
Alignment:
Q  43 cataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||  ||| ||||||||||||||||||| |||| |||||||||    
T  16917525 cataaccaatagttaatgaaaattgtttttacatcttcccatgaaacttatt 16917576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 35084178 - 35084115
Alignment:
Q  31 tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||| || || ||||| | ||||||||||||||||||  || |||||||||    
T  35084178 tttcattttctccataatcattatccaataagaattgtttttacatctttttatgaaacttatt 35084115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 8015797 - 8015743
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||| |||||| || |||| ||||| ||||| |||||||||||||||||||    
T  8015797 tctctcttgcattttttctataatcaataaccaataaaaattgtttttacatctt 8015743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 14718049 - 14717995
Alignment:
Q  152 tttgatattttcccacatattaaagaatgtagttaattttgtattgaaaaaagaa 206  Q
    |||||||||||  ||||| ||||  ||||||||||||||||||||| ||||||||    
T  14718049 tttgatatttttacacatcttaagaaatgtagttaattttgtattgtaaaaagaa 14717995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 76
Target Start/End: Complemental strand, 28941267 - 28941226
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacat 76  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  28941267 attttctccaaaaccaagaaccaattaaaattgtttttacat 28941226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 76
Target Start/End: Original strand, 22369261 - 22369313
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacat 76  Q
    |||||||||||||||| || ||||| |||| ||||| |||||| |||||||||    
T  22369261 ctctctctttcattttgtctataactaataaccaataaaaattatttttacat 22369313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 27810857 - 27810805
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||| ||||||||  |||| ||||| ||||| |||||||||||||||||||    
T  27810857 tctcttccattttctatataatcaataaccaataaaaattgtttttacatctt 27810805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 46244000 - 46243944
Alignment:
Q  152 tttgatattttcccacatattaaagaatgtagttaattttgtattgaaaaaagaaat 208  Q
    ||||| ||||||  |||||||||  ||||||  ||||||||||||||||||||||||    
T  46244000 tttgacattttcatacatattaagaaatgtaaataattttgtattgaaaaaagaaat 46243944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 45660401 - 45660467
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  45660401 tctctctttcattttctccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 45660467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 33198762 - 33198689
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||||    
T  33198762 aattttctctctctttcattttctccataaccaataaccaatcaaaattgtttttacatcttcctataaaactt 33198689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8701631 - 8701707
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||| |||||||||    
T  8701631 aattttctctctcttccattttttccataaccaatagccaatgaaaattgtttttacatcttcccatgaaacttatt 8701707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 6110324 - 6110257
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  6110324 ctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 6110257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 3201366 - 3201428
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  3201366 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctttctataaaactt 3201428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 14873999 - 14874065
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||| | |||||||||    
T  14873999 tctctctttcattttctccataaccaatagccaatgaaaattatttttacatcttcctataaaactt 14874065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 19264129 - 19264202
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  19264129 aattttctctctctttaattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 19264202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 29524172 - 29524096
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  29524172 aattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatcttcccatgaaacttatt 29524096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 35115927 - 35115859
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||| |||||||||||||||||||| | ||| ||||||||||||||||||||| ||||||||||||    
T  35115927 ctctcttccattttctccataaccaataacaaatgaaaattgtttttacatctttctataaaacttatt 35115859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 40584529 - 40584453
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||  |||||||||| | ||||| ||||||||||||||||||| ||||||||||||||    
T  40584529 aattttctctctctttcatttttcccataaccaacaaccaatgaaaattgtttttacatcttcccataaaacttatt 40584453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 41528285 - 41528355
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  41528285 aattttctctttctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaa 41528355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 28858338 - 28858411
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||||||||||||||||  | |||||||||||||||| |||||| |||||||||||||| |||||||||    
T  28858338 aattttctctctctttcatttttacaataaccaatagccaatgaaaattatttttacatctttctataaaactt 28858411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 45085286 - 45085359
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||||||||| || ||| ||||||||||||||||||| | |||||||||    
T  45085286 aattttctctctctttcattttttccataaccaatggctaatgaaaattgtttttacatcttcctataaaactt 45085359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 5963230 - 5963305
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| |||||| |||||||||| | ||||||||||||||    
T  5963230 aattttctctctcttccattttcttcataaccaatagccaataaaaattatttttacatc-tcccataaaacttatt 5963305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 24204660 - 24204584
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||||| ||||||||||||||||| ||||||| |||||||| || | ||||||||||||    
T  24204660 aattttctctctcttccattttcttcataaccaatagccaatgaaaattgattttacatattcctataaaacttatt 24204584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 25572075 - 25572150
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||| ||||||||||||| ||||| ||||||||||||||||||| |||| |||||||||    
T  25572075 aattttctctctcttccatttt-tccataaccaatatccaatgaaaattgtttttacatcttcccatgaaacttatt 25572150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 94
Target Start/End: Original strand, 12938278 - 12938347
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttcc-ataaaacttatt 94  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  12938278 tctctcttttattttctccataatcaatagccaatgaaaattgtttttaca-ctttcctataaaacttatt 12938347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 92
Target Start/End: Original strand, 33677512 - 33677586
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactta 92  Q
    ||||| || ||||||  |||||||||||||||||||| |||| ||||||||||||||||||| | ||||||||||    
T  33677512 aattttctttctcttcaattttctccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactta 33677586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 11617053 - 11617126
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| |||||  | |||||||||||||||| ||||||||||||||||||| | |||||||||    
T  11617053 aattttctctctcttttatttttactataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 11617126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 28599279 - 28599218
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| |||||| ||||||||||||    
T  28599279 aattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctt 28599218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 35517152 - 35517225
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| |||||| |||||||||||  | |||||||||    
T  35517152 aattttctctttctttcattttttccataaccaatagccaatgaaaattatttttacatctcactataaaactt 35517225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 9864841 - 9864774
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||| |||||||||||||| |||| |||||| |||||||||||||| |||| |||| |||||||||    
T  9864841 tctcttccattttctccataatcaattgccaatgaaaattgtttttacctcttcccatgaaacttatt 9864774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 6766065 - 6765988
Alignment:
Q  18 aatttcctctctctttcattttct-ccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||| |||||| | ||||||||||||| |||| ||||||||||||||||||| | |||||| |||||    
T  6766065 aattttctctctcttccatttttttccataaccaatagtcaataaaaattgtttttacatcttcctataaaatttatt 6765988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 26998346 - 26998422
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  26998346 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 26998422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 5280638 - 5280592
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaa 64  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  5280638 aattttctctctctttcattttttccataaccaatagccaatgaaaa 5280592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 9709549 - 9709615
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||||| |||| ||||| | ||| ||||||||||| ||||||| | |||||||||    
T  9709549 tctctctttcattttctcaataatcaataacaaatgaaaattgttttcacatcttcctataaaactt 9709615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 11031054 - 11030985
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| ||||||||||       ||||||||||||| ||||||| ||||||||||||    
T  11031054 aatttgctctctctttcattttctcaataaccaata-------aaaattgtttttatatctttctataaaacttatt 11030985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 40808843 - 40808775
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| ||||| ||| |||||||| || ||| ||||||||||||||||| |||||| |||||||||    
T  40808843 tctctcttttattttttccctaaccaattgctaatgaaaattgtttttacatc-ttccatgaaacttatt 40808775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 7645342 - 7645282
Alignment:
Q  34 cattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||  |||||||||| |||||||||||||||| || |||| ||| |||||    
T  7645342 cattttctccataattaatagccaatgaaaattgtttttacatgttcccatgaaatttatt 7645282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 16179705 - 16179642
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||||||||| ||||||||||       ||| ||||||||||||||||| ||||||||||||    
T  16179705 ctctctctttcattttctcaataaccaata-------aaatttgtttttacatctttctataaaacttatt 16179642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 32010131 - 32010207
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| |||||| |||||||||||| | ||||||||||||    
T  32010131 aatttgctctctttttcattttctctataatcaactaccaatgaaaattatttttacatcttcctataaaacttatt 32010207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 32273700 - 32273776
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||| ||||| | ||||||||||||    
T  32273700 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttatatcttcctataaaacttatt 32273776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 8032800 - 8032725
Alignment:
Q  18 aatttcctctctc-tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactta 92  Q
    ||||| ||||||| |||||||||||| ||||| |  | ||||| ||||||||||||||||||| | ||||||||||    
T  8032800 aatttgctctctcctttcattttctcaataactagcaaccaataaaaattgtttttacatcttcctataaaactta 8032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 18834024 - 18833965
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||  | || ||||| | |||||||||||||||||||||| |||||||||    
T  18834024 attttctccataataattaaccaatgataattgtttttacatctttccatgaaacttatt 18833965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 4891764 - 4891694
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||| |||||||||||  |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  4891764 ctctctttttcattttctttataatcaactaccaataaaaattgtttttacatcttcctataaaacttatt 4891694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 94
Target Start/End: Original strand, 44545944 - 44545977
Alignment:
Q  61 aaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||||||| |||||||||||||    
T  44545944 aaaattgtttttacatcttttcataaaacttatt 44545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 28678766 - 28678703
Alignment:
Q  30 ctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||||| |||| ||||| |||| ||||| ||||||||||| |||| |||| |||||||    
T  28678766 ctttcattttctctataatcaataaccaa-taaaaatgtttttacatttttctataacacttatt 28678703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 30830727 - 30830651
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| ||||| ||||| ||| || |||||| |||||  ||| |||||||||    
T  30830727 aattttctctctttttcattttctcaataatcaataaccaatgaaatttttttttaaatcttctcatgaaacttatt 30830651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 4e-22; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 34890307 - 34890234
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  34890307 aattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 34890234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 36190799 - 36190872
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| ||||||||||||||||||| | |||||||||    
T  36190799 aattttctctctcttttattttttccataaccaatagccaatgaaaattgtttttacatcttcctataaaactt 36190872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 30575968 - 30575910
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacat 76  Q
    ||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  30575968 aattttctctctctttcattttttccataaccaatagccaatgaaaattgtttttacat 30575910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 43216473 - 43216407
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||||||||||||||||||||||  ||| ||||||||||||||||||| | |||||||||    
T  43216473 tctctctttcattttctccataaccaatagtgaatgaaaattgtttttacatcttcctataaaactt 43216407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 3642102 - 3642042
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  3642102 aattttctctctctttcattttttccataaccaatagccaa-taaaattgtttttacatctt 3642042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8711904 - 8711977
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||| ||||| ||||||||||||||||||| |||||| |||||||||||| | |||||||||    
T  8711904 aattttctctctctttaattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactt 8711977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 31734142 - 31734215
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||| |||||||||||| ||||||||||||| ||||| | |||||||||    
T  31734142 aattttctctctctttcattttttccatatccaatagccaatgaaaattgtttttatatcttcctataaaactt 31734215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 2628297 - 2628221
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||||| |||| ||||| ||||| |||||| |||||||||||| | ||||||||||||    
T  2628297 aatttgctctctctttcattttctcaataagcaataaccaatgaaaattatttttacatcttcctataaaacttatt 2628221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 4047027 - 4046951
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| |||||||||||| |||||| |||||| ||||||||| ||||||| |||||||||    
T  4047027 aattttctctctcttttattttttccataaccaattgccaatgaaaattatttttacatatttccatgaaacttatt 4046951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 5217428 - 5217495
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| || |||||||||    
T  5217428 tctctttcattttctctataactaataaccaataaaaattgtttttacatctttctatgaaacttatt 5217495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 26954516 - 26954449
Alignment:
Q  27 tctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||| |||||||| | ||||| ||||||||||||||||||| | ||||||||||||    
T  26954516 tctctttcattttctcaataaccaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 26954449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 35456151 - 35456084
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||| ||||| |||||||  |||||||||| ||||||||||||||||||||| |||||||||    
T  35456151 ctctctcttttattttttccataattaatagccaatgaaaattgtttttacatctttctataaaactt 35456084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 2052868 - 2052934
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||  ||||||||| || |||||||||||| ||||||||||||||||||| |||||||||||    
T  2052868 tctctcttctattttctccctagccaatagccaatgaaaattgtttttacatcttcccataaaactt 2052934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 7499753 - 7499815
Alignment:
Q  18 aatttcctctctctttcattttct-ccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||| |||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  7499753 aattttctctctctttcatttttttccataaccaatagccaatgaaaattgtttttacatctt 7499815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 35525613 - 35525675
Alignment:
Q  17 aaatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||| |||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||    
T  35525613 aaattttctctctcttttattttttccataaccaatagtcaatgaaaattgtttttacatctt 35525675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7022536 - 7022463
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||||||||||||||| |||||| |||||| ||||| | |||||||||    
T  7022536 aattttctctttctttcattttttccataaccaatagccaatgaaaattatttttatatcttcctataaaactt 7022463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7858555 - 7858628
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||| |||| | |||| ||||||||||||||||||| | |||||||||    
T  7858555 aattttctctctctttcattttttccataatcaatggtcaatgaaaattgtttttacatcttcctataaaactt 7858628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 26483559 - 26483632
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||  | |||||||||    
T  26483559 aattttctctttctttcattttttccataatcaatagccaatgaaaattgtttttacatctccctataaaactt 26483632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 28348638 - 28348710
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||| || | |||||||||    
T  28348638 aattttctctctctttcatttt-tccataaccaatagccaatggaaattgtttttacatattcctataaaactt 28348710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 41086519 - 41086446
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||| ||| ||||| ||||| ||||||||||||| ||||||||||||||||||||  |||||||||    
T  41086519 aattttctctctgttttattttttccattaccaatagccaatgaaaattgtttttacatctttatataaaactt 41086446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 16879525 - 16879449
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||||||||||||||| |||||| |||||| |||| |||||||||||||||| || |||| ||| |||||    
T  16879525 aattttctctctctttcattttcaccataatcaatagtcaataaaaattgtttttacatattcccatgaaatttatt 16879449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 29920393 - 29920325
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||  ||||| ||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||    
T  29920393 ctctcttctattttgtccataatcaatagccaatgaaaattgtttttacatcttcccatgaaacttatt 29920325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 8107750 - 8107692
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatc 77  Q
    ||||| |||||||||||||||  ||||||||||||||||||| |||||||||||||||||    
T  8107750 aattttctctctctttcattta-tccataaccaatagccaatgaaaattgtttttacatc 8107692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 13144072 - 13144006
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||| ||||||||||||| | ||| ||||||||||||||||||| | |||||||||    
T  13144072 ctctctctttcatttt-tccataaccaataactaatgaaaattgtttttacatcttcctataaaactt 13144006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 15958038 - 15957971
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||||||||| | || | |||||||||    
T  15958038 ctctctctttcattttttccataaccaatagcaaatgaaaattgtttttacttattcctataaaactt 15957971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 24892865 - 24892920
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgttttta 73  Q
    ||||| || ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  24892865 aattttctatctctttcattttttccataaccaatagccaatgaaaattgttttta 24892920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 44663909 - 44663846
Alignment:
Q  31 tttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| ||| ||| ||||||||||| |||||| ||||||||||||||||||||| |||||    
T  44663909 tttcattttgtccctaatcaatagccaataaaaattatttttacatctttccataaaatttatt 44663846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 17713256 - 17713326
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||| |||||| || |||||||||| ||||| ||||||||||||| ||||| | ||||||||||||    
T  17713256 ctctctcttccattttttcaataaccaataaccaatgaaaattgtttttaaatcttcctataaaacttatt 17713326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 34158424 - 34158351
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||||||||||  |||| | |||||||||||| |||| ||||||||||||||||||| | |||||||||    
T  34158424 aattttctctctcttttgtttttttcataaccaatagtcaatgaaaattgtttttacatcttcctataaaactt 34158351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 8712563 - 8712627
Alignment:
Q  30 ctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||| |||| ||| ||||| |||| ||||| ||||||||||||||||||||| ||||||||||||    
T  8712563 cttttatttgctctataactaataaccaataaaaattgtttttacatctttctataaaacttatt 8712627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 27819686 - 27819762
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||| |||| |||||||| ||||||||||  |||| |||| |||||||||||||||  ||||||||||||    
T  27819686 aatttgctctcccttttattttctctataaccaataatcaataaaaaatgtttttacatctttatataaaacttatt 27819762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13143798 - 13143852
Alignment:
Q  25 tctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||||||||  ||| |||||| ||||||| |||||||||||||||||||    
T  13143798 tctctctttcatttttcccacaaccaacagccaatgaaaattgtttttacatctt 13143852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 94
Target Start/End: Complemental strand, 24510805 - 24510752
Alignment:
Q  41 tccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||| || || ||||| |||||||||||||||||||||||| |||||||||    
T  24510805 tccataatcattaaccaataaaaattgtttttacatctttccatgaaacttatt 24510752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8673408 - 8673484
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| |||||||||||||||||||   ||||||||||||    
T  8673408 aatttgctctctttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcttataaaacttatt 8673484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 8745610 - 8745686
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||||| |||| ||||| || |||| ||| | ||||| ||||||||||||||||||| | ||||||||||||    
T  8745610 aatttgctctcccttttattttttctataatcaacaaccaatgaaaattgtttttacatcttcctataaaacttatt 8745686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 41362440 - 41362364
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| ||| || |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||||||||    
T  41362440 aatttgctcactttttcattttctctataatcaactaccaatgaaaattgtttttacatcttcctataaaacttatt 41362364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 16358238 - 16358183
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    |||||||||||||||| | ||||| |||||| |||| ||||||| |||||||||||    
T  16358238 ctctctctttcatttttttcataatcaatagtcaatgaaaattgattttacatctt 16358183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 33563630 - 33563568
Alignment:
Q  34 cattttctccataaccaata--gccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||| ||||||||| |  | |||| ||||||||||||||||||| ||||||||||||||    
T  33563630 cattttctgcataaccaaaatggtcaatgaaaattgtttttacatcttcccataaaacttatt 33563568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 94
Target Start/End: Original strand, 39187298 - 39187337
Alignment:
Q  55 ccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  39187298 ccaatgaaaattatttttacatctttccataaaacttatt 39187337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Complemental strand, 25195179 - 25195109
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaa 88  Q
    ||||| |||||| |||||||||||| |||| |||   ||||| ||||||||||||||||||| | ||||||    
T  25195179 aatttgctctctttttcattttctctataatcaaccaccaatgaaaattgtttttacatcttcctataaaa 25195109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 94
Target Start/End: Complemental strand, 28497245 - 28497195
Alignment:
Q  44 ataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||||||   ||| ||||||||||||||||||| ||||||||||||||    
T  28497245 ataaccaataagtaatgaaaattgtttttacatcttcccataaaacttatt 28497195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 25321676 - 25321643
Alignment:
Q  61 aaaattgtttttacatctttccataaaacttatt 94  Q
    |||||| |||||||||||||||||||||||||||    
T  25321676 aaaattatttttacatctttccataaaacttatt 25321643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 3073401 - 3073457
Alignment:
Q  152 tttgatattttcccacatattaaagaatgtagttaattttgtattgaaaaaagaaat 208  Q
    |||||||||||| |||||||||   ||| ||||||||||||||||| ||| ||||||    
T  3073401 tttgatattttcacacatattatgaaatatagttaattttgtattgcaaagagaaat 3073457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 4039014 - 4038938
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||| |||||||||||| |||| |||   | ||| |||||||||||||||||||   ||||||||||||    
T  4039014 aatttgctctctttttcattttctctataatcaactacaaatgaaaattgtttttacatcttcatataaaacttatt 4038938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 91
Target Start/End: Original strand, 154889 - 154963
Alignment:
Q  17 aaatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    |||||| |||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||||||||    
T  154889 aaattttctctatctttcattttttccataaccaatagccaatgtaaattgtttttacatctttctataaaactt 154963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0774 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0774
Description:

Target: scaffold0774; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 3560 - 3487
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| | |||||||||    
T  3560 aattttctctctctttcattttttccataaccaatagccaatgaaaattatttttacatcttcctataaaactt 3487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 10074 - 10147
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| |||||||||||||||| |||||||||||||| |||| ||||||||||||||||||| | |||||||||    
T  10074 aattttctctctctttcattttttccataaccaatagtcaatgaaaattgtttttacatcttcctataaaactt 10147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 52734 - 52658
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||  ||||||||||||| |||||| |||| |||||||||||||||| ||||||| |||||||||    
T  52734 aattttctctctcttctattttctccataatcaatagtcaatgaaaattgtttttacatatttccatcaaacttatt 52658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 157823 - 157899
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||  |||| |||||||||    
T  157823 aattttctctctcttttattttttccataaccaattgccaatgaaaattgtttttacatctccccatgaaacttatt 157899  T

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Target: scaffold0300 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 29 - 91
Target Start/End: Complemental strand, 694 - 632
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||  | |||||||||    
T  694 tctttcattttttccataaccaatagccaatgaaaattgtttttacatctccctataaaactt 632  T

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Target: scaffold0132 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 1041 - 1114
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||| |||||||||||| |||||||||||||  |||| |||| |||||||||||||||| |||||||||    
T  1041 aattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctataaaactt 1114  T

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Target: scaffold0132; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 9001 - 9074
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaactt 91  Q
    ||||| ||| |||||||||||| |||||||||||||  |||| |||| |||||||||||||||| |||||||||    
T  9001 aattttctccctctttcattttttccataaccaatactcaatgaaaactgtttttacatctttctataaaactt 9074  T

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Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Complemental strand, 161051 - 160975
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||| |||| |||||||||||||| ||||| |||| ||||| ||||||||||||||| ||||| || |||||||||    
T  161051 aatttgctctttctttcattttctcaataacaaataaccaatgaaaattgtttttacaactttctatcaaacttatt 160975  T

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Target: scaffold1786 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 893 - 952
Alignment:
Q  35 attttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    |||||||||||||||||||| |||| |||||| |||||| ||||||| ||||||||||||    
T  893 attttctccataaccaatagtcaatgaaaattatttttatatctttctataaaacttatt 952  T

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Target: scaffold0111 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 40214 - 40284
Alignment:
Q  24 ctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccataaaacttatt 94  Q
    ||||||| | |||||| || |||||||||||||||| ||||||||||||||| ||||| |||||| |||||    
T  40214 ctctctcatccattttttctataaccaatagccaatgaaaattgtttttacaactttctataaaatttatt 40284  T

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Target: scaffold0062 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 44895 - 44849
Alignment:
Q  26 ctctctttcattttctccataaccaatagccaattaaaattgttttt 72  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  44895 ctctctttcattttttccataaccaatagccaatgaaaattgttttt 44849  T

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Target: scaffold0045 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 77997 - 78047
Alignment:
Q  29 tctttcattttctccataaccaatagccaattaaaattgtttttacatctt 79  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  77997 tctttcattttttccataaccaatggccaatgaaaattgtttttacatctt 78047  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 160279 - 160345
Alignment:
Q  18 aatttcctctctctttcattttctccataaccaatagccaattaaaattgtttttacatctttccat 84  Q
    ||||| |||| |||| ||||||  |||||||||||||||||| |||| || ||||||||||| ||||    
T  160279 aattttctctttcttccatttttcccataaccaatagccaatgaaaactggttttacatcttcccat 160345  T

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