View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19696_low_6 (Length: 386)
Name: NF19696_low_6
Description: NF19696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19696_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 70 - 379
Target Start/End: Complemental strand, 45598129 - 45597820
Alignment:
| Q |
70 |
aataagtaggacaatatactttatggaagnnnnnnnnntggttcacaatgtagcaaagtaaggggaaagtccatgaaaatcacatgaagatgttacatga |
169 |
Q |
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| T |
45598129 |
aataagtaggacaatatactttatggaagagaaaaaaatggttcacagtgtagcaaagtaaggggaaagtccatgaaaatcacatgaagatgttacatga |
45598030 |
T |
|
| Q |
170 |
atctcatgatgctgcttttacggaggttgcagaaagagcaaccaatttagagaaaaacaagtttgattttgagaggtatattcaagagttacaggctaat |
269 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
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| T |
45598029 |
atctcatgatgctgcttttacggaggttgcagaaagagcaaccaatttagagaaaaacaagtttgattttgagaggtgtattcaacagttacaggctaat |
45597930 |
T |
|
| Q |
270 |
caaacaaagtgtgcagcaaaatgtaaacaagcatcttagagaatgagcaatgtagatgaagaacttcagtctttaaaattgtttcatgctaaagttgaga |
369 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45597929 |
caaacaaagtgtgcagcaaaatgtaaacaagcatctgagagaatgagcaatgtagatgaagaacttcagtctttaaaattgtttcatgctaaagttgaga |
45597830 |
T |
|
| Q |
370 |
agaataatct |
379 |
Q |
| |
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|||||||||| |
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| T |
45597829 |
agaataatct |
45597820 |
T |
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