View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19696_low_9 (Length: 330)
Name: NF19696_low_9
Description: NF19696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19696_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 14 - 312
Target Start/End: Complemental strand, 1914297 - 1914000
Alignment:
| Q |
14 |
atatacattcataacaacacctctatgttttcaacttaaaactaaaccagaaaccaaagaatataaaatctggatccaacactaaaaacctaagaagcgc |
113 |
Q |
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| T |
1914297 |
atatacattcataacaacgcctctatgttttcaacttaaaactaaaccagaaaccaaagaatataaaatctggatccaacactaaaaacctaagaagcgc |
1914198 |
T |
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| Q |
114 |
tgacacagacactcacggacaccacgacattgacaccggacacatcagtaataatttgaagaatnnnnnnnnntgaattagttgaacttaatcacatgtg |
213 |
Q |
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| T |
1914197 |
tgacacagacactcacggacaccacaacattgacaccggacacatcagtaataatttgaagaat-aaaaaaaatgaattagttgaacttaatcacatgtg |
1914099 |
T |
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| Q |
214 |
ttgttgcatactgacacatgtgagatacccgacacatctttgatcagatgtgttagtgcttcaaagctaaaaaagttacgaagcactaaagctggtcac |
312 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
1914098 |
ttgttgcatactgacacatgtgagataccgaacacatctttgatcagatgtgttagtgcttcaaagctaaaaaagctacgaagcactaaagctggtcac |
1914000 |
T |
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