View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19697_high_8 (Length: 307)
Name: NF19697_high_8
Description: NF19697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19697_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 24 - 293
Target Start/End: Complemental strand, 46305931 - 46305664
Alignment:
| Q |
24 |
tatgcatgccaaaattaaaactaaattccccagcacagttggctagtgctctgaaatcttacaactgatttaaggctgtgcaggagctgatgttatgtgg |
123 |
Q |
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| T |
46305931 |
tatgcatgccaaaattaaaactaaattccccagcacagttggctag--ctctgaaatcttacaactgatttaaggctgtgcaggagctgatgttatgtgg |
46305834 |
T |
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| Q |
124 |
aatagatccctcaaggtgattattggcaagatttctgaatagattataaaaagcaaattagaatcagacactcacaccttatactccttattgaaggtat |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46305833 |
aatagatccctcaaggtgattattggcaagatttctgaatagattataaaaagcaaattagaatcagacactcacaccttatactccttattgaaggtat |
46305734 |
T |
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| Q |
224 |
aacttatatttttataactcacaattcaaacagattttcaagcttcccaaactccttcggaatttcaccc |
293 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46305733 |
aactgatatttttataactcacaattcaaacagattttcaagcttcccaaactccttcggaatttcaccc |
46305664 |
T |
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