View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19697_low_1 (Length: 683)

Name: NF19697_low_1
Description: NF19697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19697_low_1
NF19697_low_1
[»] chr3 (67 HSPs)
chr3 (404-665)||(36750050-36750311)
chr3 (396-665)||(52492061-52492330)
chr3 (15-259)||(48705313-48705554)
chr3 (11-267)||(48715295-48715551)
chr3 (398-547)||(36750337-36750486)
chr3 (400-555)||(38922744-38922900)
chr3 (397-547)||(32490094-32490245)
chr3 (398-547)||(41755498-41755648)
chr3 (399-547)||(19132711-19132860)
chr3 (399-547)||(38923564-38923713)
chr3 (400-547)||(45242067-45242215)
chr3 (398-547)||(41756331-41756481)
chr3 (398-547)||(44687062-44687212)
chr3 (401-547)||(3970994-3971141)
chr3 (399-517)||(19132563-19132681)
chr3 (398-547)||(44686254-44686403)
chr3 (399-547)||(45242886-45243035)
chr3 (401-547)||(3998740-3998887)
chr3 (398-547)||(3971801-3971951)
chr3 (398-547)||(3997927-3998077)
chr3 (399-547)||(52491891-52492035)
chr3 (399-517)||(32489946-32490064)
chr3 (575-665)||(45242770-45242860)
chr3 (423-547)||(45500497-45500620)
chr3 (575-665)||(38922918-38923008)
chr3 (595-665)||(3971167-3971237)
chr3 (595-665)||(3998644-3998714)
chr3 (595-665)||(45242241-45242311)
chr3 (602-665)||(44686429-44686492)
chr3 (595-665)||(38923468-38923538)
chr3 (329-382)||(48715120-48715173)
chr3 (426-538)||(8436574-8436685)
chr3 (423-538)||(8440119-8440233)
chr3 (575-638)||(41756194-41756257)
chr3 (614-665)||(41756254-41756305)
chr3 (399-446)||(31556217-31556264)
chr3 (397-448)||(37105076-37105127)
chr3 (398-448)||(14667296-14667345)
chr3 (458-547)||(8653622-8653709)
chr3 (399-448)||(49757181-49757230)
chr3 (575-665)||(3971699-3971778)
chr3 (400-448)||(42145277-42145325)
chr3 (459-530)||(8427276-8427346)
chr3 (399-445)||(17226968-17227014)
chr3 (398-448)||(49756274-49756324)
chr3 (632-665)||(3998100-3998133)
chr3 (586-627)||(3998127-3998168)
chr3 (482-547)||(11267588-11267651)
chr3 (632-665)||(41755674-41755707)
chr3 (632-665)||(44687003-44687036)
chr3 (399-446)||(21811879-21811926)
chr3 (459-530)||(25025234-25025304)
chr3 (399-446)||(31556188-31556235)
chr3 (401-448)||(32994927-32994974)
chr3 (397-448)||(46719659-46719710)
chr3 (459-530)||(47737629-47737699)
chr3 (410-448)||(37104363-37104401)
chr3 (399-433)||(38923438-38923472)
chr3 (399-433)||(45242307-45242341)
chr3 (612-649)||(8436530-8436567)
chr3 (612-649)||(8440075-8440112)
chr3 (399-440)||(17227955-17227996)
chr3 (398-447)||(43638078-43638127)
chr3 (398-447)||(49749124-49749173)
chr3 (502-547)||(50305167-50305212)
chr3 (406-446)||(38337478-38337518)
chr3 (399-447)||(39901846-39901894)
[»] chr7 (46 HSPs)
chr7 (399-665)||(38072073-38072339)
chr7 (401-665)||(7677592-7677855)
chr7 (403-665)||(4261209-4261471)
chr7 (399-547)||(17145622-17145772)
chr7 (398-547)||(38071897-38072047)
chr7 (399-547)||(668179-668328)
chr7 (398-547)||(37864206-37864356)
chr7 (399-547)||(669002-669151)
chr7 (398-547)||(4261495-4261645)
chr7 (398-516)||(38778853-38778971)
chr7 (399-513)||(38779498-38779611)
chr7 (403-547)||(7677421-7677566)
chr7 (398-547)||(41194512-41194659)
chr7 (575-665)||(668886-668976)
chr7 (399-517)||(17145802-17145920)
chr7 (399-480)||(37468972-37469053)
chr7 (595-665)||(668354-668424)
chr7 (423-547)||(32859257-32859380)
chr7 (398-456)||(37468909-37468967)
chr7 (399-499)||(24322299-24322399)
chr7 (397-497)||(44909309-44909409)
chr7 (398-448)||(29006346-29006396)
chr7 (406-447)||(20890206-20890247)
chr7 (612-664)||(32859396-32859448)
chr7 (413-517)||(42607095-42607198)
chr7 (398-446)||(45887981-45888029)
chr7 (398-446)||(47331954-47332002)
chr7 (398-448)||(29007198-29007248)
chr7 (398-448)||(41224842-41224892)
chr7 (413-490)||(40257759-40257836)
chr7 (398-446)||(4985395-4985443)
chr7 (398-446)||(4989493-4989541)
chr7 (399-491)||(27599211-27599303)
chr7 (396-448)||(29314578-29314630)
chr7 (406-446)||(45887286-45887326)
chr7 (459-530)||(27855625-27855695)
chr7 (398-501)||(29315257-29315360)
chr7 (484-539)||(41195275-41195329)
chr7 (399-446)||(41533896-41533943)
chr7 (399-501)||(27600041-27600143)
chr7 (400-433)||(668420-668453)
chr7 (399-448)||(44896046-44896095)
chr7 (404-445)||(48259820-48259861)
chr7 (398-446)||(24321424-24321472)
chr7 (406-446)||(24322429-24322469)
chr7 (413-517)||(40257594-40257697)
[»] scaffold0041 (2 HSPs)
scaffold0041 (399-665)||(27221-27486)
scaffold0041 (399-476)||(27546-27623)
[»] chr8 (43 HSPs)
chr8 (399-665)||(5035059-5035324)
chr8 (397-547)||(34992163-34992314)
chr8 (398-545)||(41859309-41859457)
chr8 (406-547)||(37639718-37639860)
chr8 (399-547)||(32536708-32536857)
chr8 (398-517)||(5034897-5035016)
chr8 (399-547)||(38023624-38023773)
chr8 (399-517)||(34992015-34992133)
chr8 (398-547)||(41859995-41860145)
chr8 (575-665)||(32537271-32537361)
chr8 (575-665)||(37639886-37639976)
chr8 (575-665)||(38024314-38024404)
chr8 (398-547)||(32537387-32537534)
chr8 (595-665)||(32536880-32536950)
chr8 (595-665)||(37640400-37640470)
chr8 (485-547)||(38024430-38024492)
chr8 (575-665)||(41859485-41859585)
chr8 (614-665)||(38023799-38023850)
chr8 (398-447)||(25876520-25876569)
chr8 (407-471)||(37640538-37640601)
chr8 (398-447)||(61453-61502)
chr8 (399-448)||(27918046-27918095)
chr8 (399-447)||(1365829-1365877)
chr8 (398-436)||(44098432-44098470)
chr8 (482-539)||(10501822-10501877)
chr8 (399-448)||(41092172-41092221)
chr8 (632-665)||(41859936-41859969)
chr8 (399-447)||(39254787-39254835)
chr8 (459-530)||(7818534-7818604)
chr8 (459-530)||(10806008-10806078)
chr8 (459-530)||(39852759-39852829)
chr8 (401-448)||(41348146-41348193)
chr8 (399-446)||(43924490-43924537)
chr8 (398-500)||(30272903-30273005)
chr8 (459-529)||(38778752-38778821)
chr8 (406-447)||(4364046-4364087)
chr8 (398-447)||(7424562-7424611)
chr8 (399-500)||(36936644-36936745)
chr8 (398-447)||(39255752-39255801)
chr8 (398-447)||(44751607-44751656)
chr8 (399-447)||(62240-62288)
chr8 (399-447)||(36936418-36936466)
chr8 (399-447)||(42345166-42345214)
[»] chr5 (38 HSPs)
chr5 (398-555)||(33001931-33002087)
chr5 (398-547)||(33002715-33002865)
chr5 (399-547)||(686417-686565)
chr5 (399-547)||(15183916-15184065)
chr5 (398-545)||(8204119-8204267)
chr5 (398-547)||(8040194-8040344)
chr5 (399-547)||(15183088-15183238)
chr5 (398-527)||(12190078-12190207)
chr5 (560-665)||(33002584-33002689)
chr5 (398-517)||(36626560-36626679)
chr5 (400-547)||(687247-687395)
chr5 (398-517)||(8040374-8040493)
chr5 (575-665)||(15183264-15183354)
chr5 (398-499)||(33283971-33284072)
chr5 (399-446)||(39950404-39950451)
chr5 (403-499)||(33283169-33283265)
chr5 (575-665)||(687121-687221)
chr5 (399-446)||(2319266-2319313)
chr5 (405-448)||(4607470-4607513)
chr5 (399-501)||(16970979-16971081)
chr5 (595-665)||(686591-686671)
chr5 (399-448)||(4608589-4608638)
chr5 (398-447)||(13654932-13654981)
chr5 (632-665)||(15183857-15183890)
chr5 (398-446)||(2319968-2320016)
chr5 (398-446)||(26268343-26268391)
chr5 (426-478)||(33685772-33685824)
chr5 (399-435)||(39950444-39950480)
chr5 (398-449)||(13404701-13404752)
chr5 (399-446)||(26269022-26269069)
chr5 (399-433)||(686667-686701)
chr5 (398-448)||(2458353-2458403)
chr5 (398-447)||(8226641-8226690)
chr5 (399-448)||(31148444-31148493)
chr5 (404-445)||(39167442-39167483)
chr5 (458-538)||(42518811-42518891)
chr5 (399-447)||(26688166-26688214)
chr5 (399-447)||(26957897-26957945)
[»] chr4 (87 HSPs)
chr4 (399-555)||(39523164-39523319)
chr4 (398-547)||(11417686-11417836)
chr4 (398-547)||(26611182-26611332)
chr4 (398-547)||(10424958-10425108)
chr4 (398-547)||(21166274-21166424)
chr4 (398-547)||(29651231-29651381)
chr4 (399-547)||(10424123-10424272)
chr4 (403-555)||(38143628-38143781)
chr4 (399-547)||(45230365-45230514)
chr4 (399-547)||(36865616-36865765)
chr4 (399-517)||(11417867-11417985)
chr4 (404-547)||(26610350-26610495)
chr4 (399-547)||(38694850-38695002)
chr4 (399-547)||(45235859-45236008)
chr4 (397-517)||(31836390-31836510)
chr4 (400-547)||(29650416-29650564)
chr4 (399-517)||(38694702-38694820)
chr4 (399-547)||(21165447-21165596)
chr4 (398-517)||(9939301-9939420)
chr4 (398-547)||(39522374-39522524)
chr4 (399-547)||(31835148-31835297)
chr4 (400-517)||(36864818-36864935)
chr4 (560-665)||(39522550-39522655)
chr4 (398-545)||(9939124-9939269)
chr4 (575-665)||(29651115-29651205)
chr4 (417-517)||(38143506-38143606)
chr4 (575-665)||(21165622-21165712)
chr4 (575-665)||(36865501-36865591)
chr4 (575-665)||(10424842-10424932)
chr4 (413-547)||(25970120-25970250)
chr4 (413-547)||(36451327-36451461)
chr4 (437-555)||(11806129-11806244)
chr4 (416-547)||(23383327-23383457)
chr4 (426-547)||(17648044-17648165)
chr4 (595-665)||(26611086-26611156)
chr4 (595-665)||(45235763-45235833)
chr4 (413-541)||(36450742-36450871)
chr4 (398-548)||(25970701-25970852)
chr4 (595-665)||(29650589-29650659)
chr4 (614-665)||(26610521-26610572)
chr4 (614-665)||(10424298-10424349)
chr4 (575-638)||(26610569-26610632)
chr4 (397-448)||(47377597-47377648)
chr4 (620-665)||(31836287-31836332)
chr4 (399-491)||(30808621-30808713)
chr4 (404-447)||(3847891-3847934)
chr4 (614-665)||(21166197-21166248)
chr4 (579-645)||(11806244-11806310)
chr4 (397-447)||(47198603-47198653)
chr4 (398-447)||(42544487-42544536)
chr4 (399-452)||(47376852-47376905)
chr4 (399-499)||(38014870-38014970)
chr4 (625-665)||(45230540-45230580)
chr4 (404-447)||(3848578-3848621)
chr4 (406-448)||(11680283-11680325)
chr4 (406-448)||(11688562-11688604)
chr4 (404-446)||(25370511-25370553)
chr4 (398-448)||(28684231-28684281)
chr4 (632-665)||(31835323-31835356)
chr4 (399-448)||(37275088-37275137)
chr4 (397-446)||(46765169-46765218)
chr4 (398-447)||(52757812-52757861)
chr4 (458-528)||(5825393-5825459)
chr4 (399-447)||(25371545-25371593)
chr4 (595-638)||(10424346-10424389)
chr4 (398-500)||(12589286-12589388)
chr4 (396-447)||(55159177-55159228)
chr4 (399-433)||(10424385-10424419)
chr4 (406-448)||(12590202-12590244)
chr4 (399-433)||(21166137-21166171)
chr4 (398-448)||(23425206-23425256)
chr4 (406-448)||(25655638-25655680)
chr4 (399-433)||(29650655-29650689)
chr4 (399-433)||(31836221-31836255)
chr4 (398-448)||(31910553-31910603)
chr4 (631-665)||(36864990-36865024)
chr4 (399-433)||(45235733-45235767)
chr4 (398-447)||(30478308-30478357)
chr4 (399-448)||(42545562-42545611)
chr4 (398-447)||(47199395-47199444)
chr4 (398-447)||(48013316-48013365)
chr4 (398-447)||(55160067-55160115)
chr4 (398-446)||(11681275-11681323)
chr4 (398-446)||(11689554-11689602)
chr4 (482-530)||(20822706-20822754)
chr4 (399-443)||(23865321-23865365)
chr4 (400-448)||(52758709-52758757)
[»] chr6 (36 HSPs)
chr6 (401-547)||(3542816-3542963)
chr6 (399-555)||(33480519-33480676)
chr6 (399-517)||(3542993-3543111)
chr6 (399-547)||(15083217-15083366)
chr6 (399-547)||(22579935-22580084)
chr6 (399-547)||(33018167-33018316)
chr6 (401-547)||(33479698-33479846)
chr6 (404-547)||(15082402-15082546)
chr6 (397-517)||(33018346-33018466)
chr6 (398-537)||(7193337-7193474)
chr6 (403-543)||(22587213-22587354)
chr6 (398-517)||(7193508-7193627)
chr6 (575-665)||(15083101-15083191)
chr6 (575-665)||(22580110-22580200)
chr6 (403-506)||(22582420-22582523)
chr6 (595-665)||(33479872-33479942)
chr6 (595-665)||(22580627-22580697)
chr6 (595-665)||(22587113-22587183)
chr6 (595-665)||(15082572-15082642)
chr6 (399-448)||(24125972-24126021)
chr6 (399-452)||(24126713-24126766)
chr6 (398-447)||(7159341-7159390)
chr6 (632-665)||(33480468-33480501)
chr6 (399-447)||(7531829-7531877)
chr6 (404-446)||(10607406-10607448)
chr6 (406-448)||(10608319-10608361)
chr6 (397-447)||(14337557-14337607)
chr6 (399-433)||(15082638-15082672)
chr6 (399-433)||(22580597-22580631)
chr6 (399-433)||(22587083-22587117)
chr6 (399-433)||(33479938-33479972)
chr6 (398-499)||(1035351-1035452)
chr6 (398-447)||(7532440-7532489)
chr6 (424-472)||(4311163-4311211)
chr6 (399-447)||(9574571-9574619)
chr6 (413-501)||(25067796-25067884)
[»] scaffold0311 (2 HSPs)
scaffold0311 (397-547)||(58-210)
scaffold0311 (634-665)||(1-32)
[»] chr2 (29 HSPs)
chr2 (399-547)||(21471853-21472002)
chr2 (398-547)||(21471016-21471166)
chr2 (397-547)||(38834385-38834536)
chr2 (398-517)||(37547997-37548116)
chr2 (399-513)||(14573261-14573374)
chr2 (399-547)||(4479603-4479750)
chr2 (398-517)||(38834566-38834685)
chr2 (399-517)||(13134318-13134436)
chr2 (398-516)||(14573930-14574048)
chr2 (575-664)||(21471737-21471826)
chr2 (614-665)||(21471192-21471243)
chr2 (399-447)||(33433160-33433208)
chr2 (621-665)||(37548175-37548219)
chr2 (424-479)||(30486909-30486964)
chr2 (397-447)||(5276463-5276513)
chr2 (398-435)||(1164788-1164825)
chr2 (399-448)||(16426553-16426602)
chr2 (399-448)||(40992222-40992271)
chr2 (398-446)||(41984726-41984774)
chr2 (397-448)||(2650227-2650278)
chr2 (484-539)||(4478936-4478990)
chr2 (459-530)||(11256696-11256766)
chr2 (398-448)||(24727820-24727870)
chr2 (399-441)||(24741811-24741853)
chr2 (398-448)||(30545434-30545484)
chr2 (398-447)||(4478850-4478899)
chr2 (398-447)||(19521917-19521966)
chr2 (397-446)||(41043329-41043378)
chr2 (399-451)||(30544727-30544779)
[»] chr1 (68 HSPs)
chr1 (399-547)||(43737729-43737878)
chr1 (399-547)||(16270207-16270357)
chr1 (399-517)||(23440795-23440913)
chr1 (398-545)||(48972346-48972494)
chr1 (399-547)||(9947995-9948144)
chr1 (399-527)||(9948807-9948935)
chr1 (399-547)||(23440617-23440765)
chr1 (398-547)||(51974436-51974586)
chr1 (399-547)||(16271047-16271196)
chr1 (413-555)||(6075988-6076127)
chr1 (398-517)||(43737908-43738027)
chr1 (399-555)||(48971705-48971862)
chr1 (399-547)||(51975126-51975275)
chr1 (399-547)||(193850-193997)
chr1 (399-545)||(50826992-50827138)
chr1 (399-555)||(38930312-38930469)
chr1 (560-665)||(6076636-6076741)
chr1 (423-547)||(12925897-12926020)
chr1 (413-547)||(6076767-6076901)
chr1 (423-547)||(20794313-20794436)
chr1 (417-547)||(47334217-47334347)
chr1 (575-665)||(38931029-38931119)
chr1 (434-547)||(17050488-17050600)
chr1 (575-665)||(16270383-16270473)
chr1 (423-547)||(31390726-31390847)
chr1 (401-547)||(38931145-38931293)
chr1 (614-665)||(38930487-38930538)
chr1 (399-548)||(47334798-47334948)
chr1 (429-493)||(27888701-27888765)
chr1 (614-665)||(16270971-16271022)
chr1 (614-665)||(51975049-51975100)
chr1 (595-665)||(9948706-9948775)
chr1 (614-665)||(48971880-48971931)
chr1 (398-448)||(1012546-1012596)
chr1 (575-635)||(9948188-9948248)
chr1 (434-498)||(40649516-40649580)
chr1 (398-447)||(51987826-51987875)
chr1 (612-664)||(17050616-17050668)
chr1 (426-514)||(46133720-46133807)
chr1 (617-665)||(48972270-48972318)
chr1 (458-547)||(27418222-27418311)
chr1 (398-447)||(35616775-35616824)
chr1 (398-447)||(45064685-45064734)
chr1 (400-445)||(49611562-49611607)
chr1 (632-665)||(51974612-51974645)
chr1 (399-447)||(8560839-8560887)
chr1 (612-664)||(12926036-12926088)
chr1 (399-447)||(49610706-49610754)
chr1 (81-137)||(51164776-51164832)
chr1 (575-627)||(51974639-51974691)
chr1 (399-447)||(51988464-51988512)
chr1 (459-530)||(7219068-7219138)
chr1 (595-638)||(38930535-38930578)
chr1 (459-530)||(51247888-51247958)
chr1 (459-530)||(51248439-51248509)
chr1 (398-448)||(1013471-1013521)
chr1 (399-433)||(16270901-16270935)
chr1 (399-433)||(38930574-38930608)
chr1 (398-448)||(45065385-45065435)
chr1 (405-447)||(48870753-48870795)
chr1 (457-530)||(37725437-37725509)
chr1 (399-447)||(194701-194749)
chr1 (398-446)||(8561737-8561785)
chr1 (398-490)||(11032176-11032268)
chr1 (406-446)||(14924681-14924721)
chr1 (406-446)||(14925343-14925383)
chr1 (399-447)||(37874064-37874112)
chr1 (397-445)||(48869767-48869815)
[»] scaffold0332 (1 HSPs)
scaffold0332 (399-542)||(9162-9306)
[»] scaffold0700 (1 HSPs)
scaffold0700 (424-538)||(5344-5457)
[»] scaffold0155 (1 HSPs)
scaffold0155 (399-448)||(17339-17388)
[»] scaffold0042 (1 HSPs)
scaffold0042 (591-627)||(94464-94500)


Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 404 - 665
Target Start/End: Original strand, 36750050 - 36750311
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 503  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36750050 catttaatttgggaaaggagagttcttttccaccatggaaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 36750149  T
Q  504 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccgaca 603  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  36750150 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccggca 36750249  T
Q  604 gcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36750250 gcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 36750311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 396 - 665
Target Start/End: Complemental strand, 52492330 - 52492061
Alignment:
Q  396 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactct 495  Q
    ||||||| |||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  52492330 ggaggtgtcatttaatttgggaaatgagagttcttttccaccatggaaaagttgttcatgtccattagattaaatgaggaatacattcttatcatactct 52492231  T
Q  496 ctcaaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagtt 595  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52492230 ctcaaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagtt 52492131  T
Q  596 ttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  52492130 ttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 52492061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 48705554 - 48705313
Alignment:
Q  15 tcttttgggtggaatattggcacaaattactaaaaatgaaagtaatattgtagtgaaagtgggagctgtaattgatattagcagtaatgaaacggttggg 114  Q
    |||||||||||||||||||||||||| ||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705554 tcttttgggtggaatattggcacaaagta---agaatgaaagtaatattgtagtgaaagtgggagctgtaattgatattagcagtaatgaaacggttggg 48705458  T
Q  115 aagataggattgagctgcataaacatgtcactctcagatttctatctctctcattctcattacaaaaccagaattcaactcatcgtaagggattctcata 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48705457 aagataggattgagctgcataaacatgtcactctcagatttctatctctctcattctcattacaaaaccagaattcaactcatcgtaagggattctcata 48705358  T
Q  215 gggacgtcgtcgctgcagctgcacacggtaattcttactaattgc 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  48705357 gggacgtcgtcgctgcagctgcacacggtaattcttactaattgc 48705313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 48715551 - 48715295
Alignment:
Q  11 ttattcttttgggtggaatattggcacaaattactaaaaatgaaagtaatattgtagtgaaagtgggagctgtaattgatattagcagtaatgaaacggt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  48715551 ttattcttttgggtggaatattggcacaaattactaaaaatgagagtaatattgtagtgaaagtgggagctgtaattgatgttagcagtaatggaacggt 48715452  T
Q  111 tgggaagataggattgagctgcataaacatgtcactctcagatttctatctctctcattctcattacaaaaccagaattcaactcatcgtaagggattct 210  Q
    |||||| |||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||     
T  48715451 tgggaaaataggattgagctgcataaacatgtctctttcagatttctatctttctcattctcattacaaaaccagaattcaactcatccttagggattcc 48715352  T
Q  211 catagggacgtcgtcgctgcagctgcacacggtaattcttactaattgcatctctct 267  Q
    |||| |||||||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  48715351 cataaggacgtcgtctctgccgctgcacacggtaattattactaattgcacctctct 48715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 36750486 - 36750337
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  36750486 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctct 36750387  T
Q  498 caaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  36750386 caaccactagattattttttatactatctttcacactctctctttcatgt 36750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 400 - 555
Target Start/End: Original strand, 38922744 - 38922900
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 499  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||| || | |||| |||||||||||||||    
T  38922744 gtgccatttaatttgggaaaggagagttatttcctaccatgggaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctca 38922843  T
Q  500 accactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    |||||||||||| ||||||| |||||||| ||| ||||||||||||||| |||||||    
T  38922844 accactagattatttttttatactatctttcacactctctctttcatgtcctcacac 38922900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 397 - 547
Target Start/End: Complemental strand, 32490245 - 32490094
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  32490245 gaggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 32490146  T
Q  497 tcaaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||||| ||||| |||||||| ||| ||| |||||||||||    
T  32490145 tcaaccactagattatttttttatactatctttcacactccctctttcatgt 32490094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 41755498 - 41755648
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  41755498 aggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaaattgatcatgttcattagattaaatgaggaacatatttctatcatactctct 41755597  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41755598 caaccactatattatttttttatactatctttcacactctctctttcatgt 41755648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 19132860 - 19132711
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  19132860 ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcttatcatactctctc 19132761  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||| ||||||| ||||| | |||||| |||  ||||||||||||||    
T  19132760 aaccactggattatttttttatattatctttcacattctctctttcatgt 19132711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 38923713 - 38923564
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| | |||  ||||||||||||||    
T  38923713 ggtgccatttaatttgggaaatgagagttctttcccaccatggaaaagttgataatgttcattagattaaatgaggaacatatttctatcatactctctc 38923614  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  38923613 aaccactagattatttttttatactatctttcacactctctctttcatgt 38923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 400 - 547
Target Start/End: Original strand, 45242067 - 45242215
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 499  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||    
T  45242067 gtgccatttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 45242166  T
Q  500 accactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  45242167 accactagattatttttttatactatctttcacactctctctttcatgt 45242215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 41756481 - 41756331
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| ||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  41756481 aggtgtcatttaagttaggaaaggagagttctttcccatcatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctct 41756382  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  41756381 caaccattagattatttttttatactatctttcacactctctctttcatgt 41756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 44687212 - 44687062
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||||||||| | |||| |||||||||||||    
T  44687212 aggtgccatttaatttgggaaaggagaattcttttccaccatggaaaagttgatcatattcattagattaaatgaggaaaatattcctatcatactctct 44687113  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  44687112 caaccattagattatttttttatactatctttcacactctctctttcatgt 44687062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 401 - 547
Target Start/End: Original strand, 3970994 - 3971141
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 500  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3970994 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3971093  T
Q  501 ccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||| ||||| ||||||| |||||||| ||| |||||||||||||||    
T  3971094 ccacttgattatttttttatactatctttcacactctctctttcatgt 3971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 399 - 517
Target Start/End: Original strand, 19132563 - 19132681
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  19132563 ggtgccatttaatttgggaaaggagagttctttcctactatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 19132662  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  19132663 aaccactagattatttttt 19132681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 44686254 - 44686403
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  44686254 aggtgccatttaatttggaaaaggagagtttttttc-accatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 44686352  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  44686353 caaccactagattatttttttatactatctttcacactctctctttcatgt 44686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 45243035 - 45242886
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  45243035 ggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 45242936  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  45242935 aaccactagattatttttttatattatctttcacactctctctttcatgt 45242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 401 - 547
Target Start/End: Complemental strand, 3998887 - 3998740
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 500  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3998887 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3998788  T
Q  501 ccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||| ||||||| ||||| ||||||||  || |||||||||||||||    
T  3998787 ccacttgattatttttttatactatcttttacactctctctttcatgt 3998740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 3971951 - 3971801
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||| ||||| || |||| |||||||  ||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  3971951 aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctct 3971852  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  3971851 caaccactagattatttttttatactatctttcacactctctctttcatgt 3971801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 3997927 - 3998077
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||| ||||| || |||| |||||||  ||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  3997927 aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctct 3998026  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  3998027 caaccactagattatttttttatactatctttcacactctctctttcatgt 3998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 52491891 - 52492035
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||     ||| |||||||||||||| ||||||||||||| ||||| | |||  ||||||||||||||    
T  52491891 ggtgccatttaatttgggaaaggagagttctttcc-----tggaaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 52491985  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  52491986 aaccactagattatttttttatactatctttcacactctctctttcatgt 52492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 399 - 517
Target Start/End: Original strand, 32489946 - 32490064
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||| ||||| | |||  ||||||||||||||    
T  32489946 ggtgccatttaatttgggaaaggagaattcttttccaccatgggaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 32490045  T
Q  499 aaccactagattatttttt 517  Q
    |||||||  ||||||||||    
T  32490046 aaccactgaattatttttt 32490064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 45242770 - 45242860
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45242770 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 45242860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 423 - 547
Target Start/End: Original strand, 45500497 - 45500620
Alignment:
Q  423 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 522  Q
    |||||| || |||| |||||||||||||| |||| ||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||| |||   ||    
T  45500497 gagtttgtttccacaatgggaaagttgattatgtccattagattaaatgaggaacacattcttattctactctctcaa-cactagattattgttttatct 45500595  T
Q  523 atcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||||||||||    
T  45500596 atcttccaccctctctctttcatgt 45500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 38923008 - 38922918
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| |||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38923008 aaaatcgtacgctaacaagtttttcggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 38922918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 3971237 - 3971167
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3971237 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 3971167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 3998644 - 3998714
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3998644 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 3998714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 45242311 - 45242241
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45242311 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 45242241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 602 - 665
Target Start/End: Complemental strand, 44686492 - 44686429
Alignment:
Q  602 cagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44686492 cagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 44686429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 38923468 - 38923538
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  38923468 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgctgaatttgtgattta 38923538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 48715173 - 48715120
Alignment:
Q  329 ttttccttaataattgtgataaatatgaatgagtttcagttcacggataaatga 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48715173 ttttccttaataattgtgataaatatgaatgagtttcagttcacggatgaatga 48715120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 426 - 538
Target Start/End: Complemental strand, 8436685 - 8436574
Alignment:
Q  426 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatc 525  Q
    |||||| ||||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  |||| ||||||| | |||||||||||||||||||||    
T  8436685 tttttttccaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacatttttatactactttctcaac-attagattattttttacactatc 8436587  T
Q  526 ttccaccctctct 538  Q
    |||||| ||||||    
T  8436586 ttccactctctct 8436574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 538
Target Start/End: Complemental strand, 8440233 - 8440119
Alignment:
Q  423 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 522  Q
    |||||||||  |||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  ||||||||||| || ||||||||||||||||||    
T  8440233 gagttttttttcaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacattattatactactctctcaa-cattagattattttttacact 8440135  T
Q  523 atcttccaccctctct 538  Q
    ||||| ||| ||||||    
T  8440134 atctttcactctctct 8440119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 575 - 638
Target Start/End: Original strand, 41756194 - 41756257
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggt 638  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  41756194 aaaatcgtacgctaacaagttttccggcagcaaccatgatggtgtgtggtggtgcagtggtggt 41756257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 614 - 665
Target Start/End: Original strand, 41756254 - 41756305
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41756254 tggtgtgtggtagtgcaatggtggtcaaagtggttgttgaatttgtgattta 41756305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 446
Target Start/End: Complemental strand, 31556264 - 31556217
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  31556264 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaag 31556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 37105127 - 37105076
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  37105127 gaggtgccgtttaatttgggaaacgagacttttttcccaccatgggaaagtt 37105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 14667296 - 14667345
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  14667296 aggtgccgtttaatttgggaaaggaga-ttttttcccaccatgggaaagtt 14667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 547
Target Start/End: Complemental strand, 8653709 - 8653622
Alignment:
Q  458 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    |||| ||| ||||||| || ||| |||||||||| || |||||| ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  8653709 catttgatcaaatgagaaacacactcttatcatattccctcaac-actagatcattttctacactatcttcc-ccctctctctttcatgt 8653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 49757230 - 49757181
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  49757230 ggtgccgtttaatttgggaaaggagacttttttcctaccatgggaaagtt 49757181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 3971699 - 3971778
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| |||||||||||           ||||||||||||||||||||||||||||||    
T  3971699 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggt-----------ggtcaaagtggttgttgaatttgtgattta 3971778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 42145325 - 42145277
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  42145325 gtgccatttaatttgggaaaggagactttttttccaccataggaaagtt 42145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 8427276 - 8427346
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||||||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  8427276 attagattaaatgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 8427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 445
Target Start/End: Original strand, 17226968 - 17227014
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 445  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||    
T  17226968 ggtggcatttaatttgggaaaggagatttctttcccaccatgggaaa 17227014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 49756274 - 49756324
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  49756274 aggtgccatttaatttggaaaaggaatgttatttcccaccatgggaaagtt 49756324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Complemental strand, 3998133 - 3998100
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  3998133 tggtggtcaaagtggttgttgaatttgtgattta 3998100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 586 - 627
Target Start/End: Complemental strand, 3998168 - 3998127
Alignment:
Q  586 ctaacaagttttccgacagcaaccatgatggtgtgtggtggt 627  Q
    ||||||||||||||| ||||||||||| ||||||||||||||    
T  3998168 ctaacaagttttccggcagcaaccatggtggtgtgtggtggt 3998127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 547
Target Start/End: Complemental strand, 11267651 - 11267588
Alignment:
Q  482 tcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||  ||| |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  11267651 tcttatcatactccatca-ccactatattattttttacactatcttcc-ccctctctcttccatgt 11267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Complemental strand, 41755707 - 41755674
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  41755707 tggtggtcaaagtggttgttgaatttgtgattta 41755674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Original strand, 44687003 - 44687036
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  44687003 tggtggtcaaagtggttgttgaatttgtgattta 44687036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 21811879 - 21811926
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||||    
T  21811879 ggtgccgtttaatttgggaaatgagacttttttcctaccatgggaaag 21811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 25025234 - 25025304
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||| |||||||| ||||| |||||||||||||    
T  25025234 attagattaagtgaagaacatattcttaacatgctctctcaac-actagattttttttcacactatcttcca 25025304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 31556188 - 31556235
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||| ||||||||||| |||||||  |||||||||    
T  31556188 ggtgccatttaatttggaaaaggagagttctttcccatgatgggaaag 31556235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 32994927 - 32994974
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||||| | | |||||||||| ||||||||||||    
T  32994927 tgccatttaatttgggaaagcacatttttttcccatcatgggaaagtt 32994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 46719659 - 46719710
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||| |  ||||||||| || ||||||||||||    
T  46719659 gaggtgccatttaatttgggaaatgctagttttttctcatcatgggaaagtt 46719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 47737699 - 47737629
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  47737699 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 47737629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 448
Target Start/End: Original strand, 37104363 - 37104401
Alignment:
Q  410 atttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  37104363 atttgggaaaggagactttttttccaccatgggaaagtt 37104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 38923438 - 38923472
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  38923438 ggtgccatttaatttgggaaaggagagttctttcc 38923472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 45242341 - 45242307
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  45242341 ggtgccatttaatttgggaaaggagagttctttcc 45242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 8436530 - 8436567
Alignment:
Q  612 gatggtgtgtggtggtgcaatggtggtcaaagtggttg 649  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  8436530 gatggtgtatggtggtgctatggtggtcaaagtggttg 8436567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 612 - 649
Target Start/End: Original strand, 8440075 - 8440112
Alignment:
Q  612 gatggtgtgtggtggtgcaatggtggtcaaagtggttg 649  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  8440075 gatggtgtatggtggtgctatggtggtcaaagtggttg 8440112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 440
Target Start/End: Complemental strand, 17227996 - 17227955
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatg 440  Q
    |||| ||||||||||||||||||||| || ||||||||||||    
T  17227996 ggtggcatttaatttgggaaaggagacttctttcccaccatg 17227955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 43638127 - 43638078
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  43638127 aggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 43638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 49749124 - 49749173
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||| ||||||||||| | |||||||||| ||| |||||||    
T  49749124 aggtgccatttaacttgggaaaggaaatttttttcccatcataggaaagt 49749173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 547
Target Start/End: Complemental strand, 50305212 - 50305167
Alignment:
Q  502 cactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    ||||| |||||| ||||| ||||||||||||||||||||| |||||    
T  50305212 cactatattattctttacgctatcttccaccctctctcttccatgt 50305167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 38337518 - 38337478
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  38337518 tttaatttgggaaagggaagttgtttcccaccatgggaaag 38337478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 39901846 - 39901894
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| |||||  ||||||| ||||||| |||||||||||||||||||    
T  39901846 ggtgccgtttaacctgggaaatgagagttctttcccaccatgggaaagt 39901894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 399 - 665
Target Start/End: Complemental strand, 38072339 - 38072073
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  38072339 ggtgccatttaatttgggaaatgagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgatgaatacattcttatcatactctctc 38072240  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 598  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38072239 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 38072140  T
Q  599 cgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38072139 cggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 38072073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 401 - 665
Target Start/End: Complemental strand, 7677855 - 7677592
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 500  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7677855 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacacattcttatcatattctctcaa 7677756  T
Q  501 ccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccg 600  Q
    | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7677755 c-actaaattattttttacaatatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccg 7677657  T
Q  601 acagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  7677656 acagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtgattgttgaatttgtgattta 7677592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 403 - 665
Target Start/End: Original strand, 4261209 - 4261471
Alignment:
Q  403 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 502  Q
    ||||||||||| ||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4261209 ccatttaatttaggaaaggagagttcttttctaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacc 4261308  T
Q  503 actagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccgac 602  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| |    
T  4261309 actagattattttttacactatcttccaacctctctctttcatgttctcacactatatttgtttgatccttgaaaatggtatgctaacaagttttccggc 4261408  T
Q  603 agcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||||    
T  4261409 agcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtgattcttgaatttgtgattta 4261471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 17145622 - 17145772
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 17145721  T
Q  499 aaccactagatta--ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  17145722 aaccactagattattttttttatactatctttcacactctctctttcatgt 17145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 38071897 - 38072047
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  38071897 aggtgccatttaatttaggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 38071996  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38071997 caaccactagattatttttttatactatctttcacactctctctttcatgt 38072047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 668179 - 668328
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| ||||||||||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctc 668278  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| |||||| ||||||| |||||||| ||| |||||||||||||||    
T  668279 aaccaccagattatttttttatactatctttcacactctctctttcatgt 668328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 37864356 - 37864206
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  37864356 aggtgccatttaatttgggaaataagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 37864257  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  37864256 caaccactagattatttttttatactatctttcacactctctctttcatgt 37864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 669151 - 669002
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||| | |||| ||||||||||||||    
T  669151 ggtgccatttaatttgggaaatgagagttttttcccaccataggaaagttgatcatatccattagatcaaatgaggaacatattcctatcatactctctc 669052  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  669051 aaccactagattatttttttatactatctttcacactctctctttcatgt 669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 4261645 - 4261495
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  4261645 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatatttctatcatactctct 4261546  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  4261545 caaccattagattatttttttatactatctttcacactctctctttcatgt 4261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 398 - 516
Target Start/End: Original strand, 38778853 - 38778971
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||  | |||| |||||||||||||    
T  38778853 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggagcatattcctatcatactctct 38778952  T
Q  498 caaccactagattattttt 516  Q
    |||||||||||||||||||    
T  38778953 caaccactagattattttt 38778971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 399 - 513
Target Start/End: Complemental strand, 38779611 - 38779498
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcttataatactctctc 38779512  T
Q  499 aaccactagattatt 513  Q
    || ||||||||||||    
T  38779511 aa-cactagattatt 38779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 403 - 547
Target Start/End: Original strand, 7677421 - 7677566
Alignment:
Q  403 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 502  Q
    |||||||||||||||||||||| || ||||||||||||  |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  7677421 ccatttaatttgggaaaggagaattctttcccaccatgaaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaacc 7677520  T
Q  503 actagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||| |||| ||||||| ||||||||  || |||||||||||||||    
T  7677521 actaaattatttttttatactatcttttacactctctctttcatgt 7677566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 41194512 - 41194659
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||| | |||||||||||||||| |    
T  41194512 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttaatcatgtccattaaatt-aatgaggaacatattcttatcatactcttt 41194610  T
Q  498 caaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    | | ||||| ||||||||||| | |||||| || | ||||||||||||||    
T  41194611 cca-cactaaattattttttatattatctttcatcatctctctttcatgt 41194659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 668886 - 668976
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  668886 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 668976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 399 - 517
Target Start/End: Complemental strand, 17145920 - 17145802
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||   || ||||||||||||||||||| |||||||||||||||  || | |||| ||||||||||||||    
T  17145920 ggtgccatttaatttgggaaaggagagttcttttttactatgggaaagttgatcatgtccattagattaaatgaataacatattcctatcatactctctc 17145821  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  17145820 aaccactagattatttttt 17145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 399 - 480
Target Start/End: Complemental strand, 37469053 - 37468972
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaataca 480  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaataca 37468972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 668424 - 668354
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  668424 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 668354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 423 - 547
Target Start/End: Original strand, 32859257 - 32859380
Alignment:
Q  423 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 522  Q
    |||||||||  || || ||||||||||||  | | |||||||||||||| |||| ||||||||||  |||||||||||| | || |||||||||||||||    
T  32859257 gagttttttttcatcacgggaaagttgatagtatgcattagattaaatgtggaacacattcttatactactctctcaac-attaaattattttttacact 32859355  T
Q  523 atcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| |||||||||    
T  32859356 atcttccaccctctcactttcatgt 32859380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 398 - 456
Target Start/End: Original strand, 37468909 - 37468967
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgt 456  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37468909 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgt 37468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 399 - 499
Target Start/End: Complemental strand, 24322399 - 24322299
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| |||||||||||||||    
T  24322399 ggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctctc 24322300  T
Q  499 a 499  Q
    |    
T  24322299 a 24322299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 397 - 497
Target Start/End: Complemental strand, 44909409 - 44909309
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||| |  |  ||  | || ||| |||||||||||||||| | |||||||||||    
T  44909409 gaggtgccgtttaatttgggaaaggtaagttttttcccaccatgggaaaggtttttttggccgttggatcaaatgaggaatacattttaatcatactctc 44909310  T
Q  497 t 497  Q
    |    
T  44909309 t 44909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 29006346 - 29006396
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006346 aggtgccatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29006396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 20890206 - 20890247
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  20890206 tttaatttgggaaaggacagttttttcccaccatgggaaagt 20890247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 664
Target Start/End: Complemental strand, 32859448 - 32859396
Alignment:
Q  612 gatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattt 664  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||    
T  32859448 gatggtgtatggtggtgcgatggtggtcaaagtggttgctgaatatgtgattt 32859396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 42607095 - 42607198
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||||| || || ||||||||||||||||||||| |  ||| |||||||| ||||||| || ||| |||||||||  ||| |||| |||| ||||||    
T  42607095 tgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagatcaaatgagaaacacaatcttatcatgatctatcaa-cacttgattat 42607193  T
Q  513 ttttt 517  Q
    |||||    
T  42607194 ttttt 42607198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 45888029 - 45887981
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  45888029 aggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 45887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 47332002 - 47331954
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  47332002 aggtgacatttaatttgggaaaggctagttttttcccaccatgggaaag 47331954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 29007248 - 29007198
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||||||||    
T  29007248 aggtgtcatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29007198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 41224892 - 41224842
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||    
T  41224892 aggtgccatttaatttgggaaaggcttattttttcccaccatgggaaagtt 41224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 413 - 490
Target Start/End: Complemental strand, 40257836 - 40257759
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcat 490  Q
    ||||||| | ||||| |||||||||||| |||||||| |  ||| |||||||| ||||||| || |||||||||||||    
T  40257836 tgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagatcaaatgagaaacacattcttatcat 40257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 4985443 - 4985395
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  4985443 aggtgacatttaatttgggaaatgctagttttttcccaccatgggaaag 4985395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 4989541 - 4989493
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  4989541 aggtgacatttaatttgggaaatgctagttttttcccaccatgggaaag 4989493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 27599211 - 27599303
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcata 491  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   ||  ||||||||||| | | ||| ||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 27599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 448
Target Start/End: Original strand, 29314578 - 29314630
Alignment:
Q  396 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||| ||||||   ||||||| ||||||||||||||||    
T  29314578 ggaggtgccatttaatttgagaaaggcttgtttttttccaccatgggaaagtt 29314630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 446
Target Start/End: Original strand, 45887286 - 45887326
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  45887286 tttaatttgggaaaggctagttttttcccaccatgggaaag 45887326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 27855625 - 27855695
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  27855625 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 27855695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 501
Target Start/End: Complemental strand, 29315360 - 29315257
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||| ||||||||||||||||   |||||||||||| |||||||||||   |  |   ||||||||  ||||| ||||||| ||||||||||||| ||    
T  29315360 aggtgcaatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccct 29315261  T
Q  498 caac 501  Q
    ||||    
T  29315260 caac 29315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 41195329 - 41195275
Alignment:
Q  484 ttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 539  Q
    ||||||||||||||| || |||||||||||||||| |||||||| || ||||||||    
T  41195329 ttatcatactctctccac-actagattattttttatactatctttcatcctctctc 41195275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 41533896 - 41533943
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||||| ||||||||||||||||  |||||||| ||||||||||||||    
T  41533896 ggtgccgtttaatttgggaaaggtaagtttttttccaccatgggaaag 41533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 27600143 - 27600041
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   ||  || |||||||| | | ||| ||||||||||||||  |||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctc 27600044  T
Q  499 aac 501  Q
    |||    
T  27600043 aac 27600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 433
Target Start/End: Complemental strand, 668453 - 668420
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcc 433  Q
    |||||||||||||||||||||||||||| |||||    
T  668453 gtgccatttaatttgggaaaggagagttctttcc 668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 44896046 - 44896095
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||| |||||||||||||||   ||||||| |||||||||||||||||    
T  44896046 ggtgccgtttaatttgggaaagactagtttttccccaccatgggaaagtt 44896095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 445
Target Start/End: Complemental strand, 48259861 - 48259820
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaa 445  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  48259861 catttaatttgggaaatgttagttttttcccaccatgggaaa 48259820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 24321424 - 24321472
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||||||||||  |||||| ||||| ||| ||||||    
T  24321424 aggtgccatttaatttgggaaaggttagttttatcccatcataggaaag 24321472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 446
Target Start/End: Original strand, 24322429 - 24322469
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  24322429 tttaatttgggaaaggaaacttttttcccatcatgggaaag 24322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 40257594 - 40257697
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||| ||||||| ||| | ||||||| ||||||  |  ||| |||||||| ||||||| || |||||||||||||  ||| |||| |||| ||||||    
T  40257594 tgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagatcaaatgagaaacacattcttatcatgatctatcaa-cacttgattat 40257692  T
Q  513 ttttt 517  Q
    |||||    
T  40257693 ttttt 40257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 215; Significance: 1e-117; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 399 - 665
Target Start/End: Original strand, 27221 - 27486
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  27221 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacacattcttatcatactctctc 27320  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 598  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  27321 aac-actaaattattttttacactatcttccaccctctctctttcatgttctcatactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 27419  T
Q  599 cgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    || ||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27420 cggcagcaaccatggtagtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 27486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 399 - 476
Target Start/End: Complemental strand, 27623 - 27546
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaa 476  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  27623 ggtgccatttaatttggaaaaggagagttttttcccaccatgggaaagttgatcatatccattagattaaatgaggaa 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 211; Significance: 1e-115; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 399 - 665
Target Start/End: Complemental strand, 5035324 - 5035059
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5035324 ggtgccatttaatttgggaaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 5035225  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 598  Q
    ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035224 aac-actaaattatgttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 5035126  T
Q  599 cgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    || ||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||    
T  5035125 cggcagcaaccatggtggtgtgtggtggtgcagtggtggtaaaagtagttgttgaatttgtgtttta 5035059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 397 - 547
Target Start/End: Complemental strand, 34992314 - 34992163
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  34992314 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 34992215  T
Q  497 tcaaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  34992214 tcaaccactaaattatttttttatactatctttcacactctctctttcatgt 34992163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 398 - 545
Target Start/End: Original strand, 41859309 - 41859457
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| ||| | |||| |||||||||||||    
T  41859309 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacatattcatatcatactctct 41859408  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcat 545  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  41859409 caaccactagattatttttttatactatctttcacactctctctttcat 41859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 406 - 547
Target Start/End: Original strand, 37639718 - 37639860
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccact 505  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||| |||||||||||||||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatgatactctctcaaccact 37639817  T
Q  506 agatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| ||||||| |||||||| ||| |||||||||||||||    
T  37639818 agattatttttttatactatctttcacactctctctttcatgt 37639860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 32536708 - 32536857
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||    
T  32536708 ggtgccatttaatttaggaaatgagagttctttcccaccatgggaaagttgatcatgtccattagattaaatggggaacatattcctatcatactctctc 32536807  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  32536808 aaccactagattatttttttatactatctttcacactctctctttcatgt 32536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 398 - 517
Target Start/End: Original strand, 5034897 - 5035016
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||| | |||| |||||||||||||    
T  5034897 aggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattgaatgaggaacatattcatatcatactctct 5034996  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||||||||    
T  5034997 caaccactagattatttttt 5035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 38023624 - 38023773
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| ||||||||||||||||||||| || ||| ||| ||||| |||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  38023624 ggtgtcatttaatttgggaaaggagaattcttttccatcatggaaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 38023723  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38023724 aaccactagattatttttttatactatctttcacactctctctttcatgt 38023773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 399 - 517
Target Start/End: Original strand, 34992015 - 34992133
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  34992015 ggtgccatttaatttgggaaacgagagttattttccaccatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 34992114  T
Q  499 aaccactagattatttttt 517  Q
    |||||||| ||||||||||    
T  34992115 aaccactaaattatttttt 34992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 41860145 - 41859995
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||||||||| |||||| |||   || |||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||| |||    
T  41860145 aggtgccatttaatttgggaaagaagagttattttttactatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactttct 41860046  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41860045 caaccactatattatttttttatactatctttcacactctctctttcatgt 41859995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 32537271 - 32537361
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32537271 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 32537361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 37639976 - 37639886
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  37639976 aaaatcgtacgctaacaagttttccgacagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgcgattta 37639886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 38024314 - 38024404
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38024314 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 38024404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 32537534 - 32537387
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||| ||||||||||||||||| ||||||| ||| |||   || ||||||| ||||||| ||||| ||||||| ||||| | ||||||||||||||||||    
T  32537534 aggtaccatttaatttgggaaatgagagttcttttcca---tgagaaagttaatcatgtccattatattaaataaggaacatattcttatcatactctct 32537438  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| |||||||| | | |||||||||||||||    
T  32537437 caaccactagattatttttttatactatctttcgcactctctctttcatgt 32537387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 32536950 - 32536880
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32536950 tttccggcagcaaccaaggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 32536880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 37640400 - 37640470
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  37640400 tttccggcagcaaccatggtggtgtgcggtggtgcagtggtggtcaaggtggttgttgaatttgtgattta 37640470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 485 - 547
Target Start/End: Complemental strand, 38024492 - 38024430
Alignment:
Q  485 tatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  38024492 tatcatactctctcaaccactagattattttttatactatctttcacactctctctttcatgt 38024430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 41859585 - 41859485
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgca----------atggtggtcaaagtggttgttgaatttgtgattt 664  Q
    ||||| |||| ||||||||||||||| ||||||||||| |||||||||||||||||           |||||||||||||||||||||||||||||||||    
T  41859585 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtctgtggtggtcaaagtggttgttgaatttgtgattt 41859486  T
Q  665 a 665  Q
    |    
T  41859485 a 41859485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 38023850 - 38023799
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  38023850 tggtgtgttgtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 38023799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 25876520 - 25876569
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  25876520 aggtgccatttaatttgggaaagaagatttttttcccaccatgggaaagt 25876569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 407 - 471
Target Start/End: Complemental strand, 37640601 - 37640538
Alignment:
Q  407 ttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatg 471  Q
    |||||||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||||||    
T  37640601 ttaatttgggaaaggagagtttttttacactatggg-aagttgatcatgtttattagattaaatg 37640538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 61453 - 61502
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  61453 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 61502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 27918095 - 27918046
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  27918095 ggtgccgtttaatttgggaaatgagacttttttcccaccatgggaaagtt 27918046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 1365829 - 1365877
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||||    
T  1365829 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 1365877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 44098470 - 44098432
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccac 436  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  44098470 aggtgccatttaatttgggaaaggagagttctttcccac 44098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 482 - 539
Target Start/End: Complemental strand, 10501877 - 10501822
Alignment:
Q  482 tcttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 539  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  10501877 tcttatcatactc-ctcaac-actagattattttttacactatcatcaaccctctctc 10501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 41092172 - 41092221
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  41092172 ggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 41092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Original strand, 41859936 - 41859969
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  41859936 tggtggtcaaagtggttgttgaatttgtgattta 41859969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 39254787 - 39254835
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  39254787 ggtggcatttaatttgggaaaggagacttctttcccaccataggaaagt 39254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 7818534 - 7818604
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  7818534 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 7818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 10806008 - 10806078
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||||||| ||| | ||||||| ||| ||||||||| ||||||||| || || |||||||||||||    
T  10806008 attagattaaatgaagaacatattcttaacatgctctctcaa-cactagatttttcttcacactatcttcca 10806078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 39852829 - 39852759
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  39852829 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 39852759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 41348146 - 41348193
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||||    
T  41348146 tgccgtttaatttgggaaaggttagtttttccccaccatgggaaagtt 41348193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 43924490 - 43924537
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaag 43924537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 500
Target Start/End: Complemental strand, 30273005 - 30272903
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||| ||||||||||||||| | | |||||||||| |||||||||||   |  |   ||||||||| ||||| ||||||| | ||||||||||| ||    
T  30273005 aggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaagttttaaccattagattcaatgaagaatacacttttatcatactccct 30272906  T
Q  498 caa 500  Q
    |||    
T  30272905 caa 30272903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 459 - 529
Target Start/End: Complemental strand, 38778821 - 38778752
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcc 529  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||| ||||||||| || || ||||||||||||    
T  38778821 attagattaagtgaagaatatatttttaacatactctctcaa-cactagatttttcttcacactatcttcc 38778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 447
Target Start/End: Original strand, 4364046 - 4364087
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||| | |||||||||| |||||||||||    
T  4364046 tttaatttgggaaaggaaacttttttcccatcatgggaaagt 4364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 7424611 - 7424562
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| |||||||||| ||||| ||| |||||| |||||||||||||||    
T  7424611 aggtgcaatttaatttgagaaagaagactttttttccaccatgggaaagt 7424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 36936745 - 36936644
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||||  ||  |   ||||||||| ||| | ||||||| | ||||||||||| |||    
T  36936745 ggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaaattttaaccattagattcaataaagaatacacttttatcatactccctc 36936646  T
Q  499 aa 500  Q
    ||    
T  36936645 aa 36936644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 39255801 - 39255752
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||| |||||||| |||| || |||||||||||||||||||    
T  39255801 aggtggcatttaacttgggaaatgagacttctttcccaccatgggaaagt 39255752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 44751607 - 44751656
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||| ||||||||||||| || ||||||| |||||||||||    
T  44751607 aggtggcatttaacttgggaaaggagacttctttcccatcatgggaaagt 44751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 62288 - 62240
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||| ||||||||| || ||||||||||| |||||||    
T  62288 ggtgacatttaatttgagaaaggagacttctttcccaccataggaaagt 62240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 36936466 - 36936418
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||||    
T  36936466 ggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagt 36936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 42345166 - 42345214
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  42345166 ggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 42345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 1e-64; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 398 - 555
Target Start/End: Original strand, 33001931 - 33002087
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33001931 aggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaatacattcttatcatattctct 33002030  T
Q  498 caaccactagattattttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33002031 caa-cactaaattattttttacactatcttccaccctctctctttcatgttctcacac 33002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 33002865 - 33002715
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  33002865 aggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 33002766  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  33002765 caaccactagattatttttttatactatctttcacactctctctttcatgt 33002715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 686417 - 686565
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  686417 ggtgccatttaatttgggaaaggagagtttt-tcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatattctctc 686515  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  686516 aaccactagattatttttttatactatctttcacactctctctttcatgt 686565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 15184065 - 15183916
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 15183966  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| |||||  ||||||| ||| |||||||||||||||    
T  15183965 aaccactagattatttttttatgctatctttcacactctctctttcatgt 15183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 398 - 545
Target Start/End: Original strand, 8204119 - 8204267
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| |||    
T  8204119 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactatct 8204218  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcat 545  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  8204219 caaccactagattatttttttatactatctttcacactctctctttcat 8204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 8040194 - 8040344
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  8040194 aggtgccatttaatttgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccattagattaaatgaggaatatattcttatcatactctct 8040293  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  8040294 caaccactacattatttttttatactatctttcacactctctctttcatgt 8040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 15183088 - 15183238
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttt-tttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| | |||  |||||||||||||    
T  15183088 ggtgccatttaatttgggaaaggagagtttatttcccatcatgagaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 15183187  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||| ||||||| |||||||| ||| ||||| |||||||||    
T  15183188 caaccactagattatttttttatactatctttcacactctcactttcatgt 15183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 398 - 527
Target Start/End: Complemental strand, 12190207 - 12190078
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  |||||||||||||    
T  12190207 aggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 12190108  T
Q  498 caaccactagattattttttacactatctt 527  Q
    ||| || |||||||||||||| | ||||||    
T  12190107 caatcattagattattttttatattatctt 12190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 560 - 665
Target Start/End: Original strand, 33002584 - 33002689
Alignment:
Q  560 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgt 659  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  33002584 tttgtttgatccttgaaaatggtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgt 33002683  T
Q  660 gattta 665  Q
    ||||||    
T  33002684 gattta 33002689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 398 - 517
Target Start/End: Complemental strand, 36626679 - 36626560
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | ||| ||||||| ||||||| ||||||||||||||||||    
T  36626679 aggtgccatttaatttgggaaatgagagttctttcccaccatgggaaagttgatcatgtccgttatattaaataaggaatatattcttatcatactctct 36626580  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||| ||||    
T  36626579 caaccactagattatatttt 36626560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 400 - 547
Target Start/End: Complemental strand, 687395 - 687247
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 499  Q
    |||||||||||||||||||||||||||| ||| |||| |||| ||||||||| |||| ||||||||||||||||||| | |||| |||||||||||||||    
T  687395 gtgccatttaatttgggaaaggagagttcttttccactatggaaaagttgattatgtccattagattaaatgaggaacatattcctatcatactctctca 687296  T
Q  500 accactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    | ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  687295 atcactaaattatttttttatactatctttcacactctctctttcatgt 687247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 398 - 517
Target Start/End: Complemental strand, 8040493 - 8040374
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||||||||||| | || ||||||||| |||||||||| ||||||| |||||||||||||  |||| | |||  |||||||||||||    
T  8040493 aggtgccatttaatttgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccattagattaaatagggaacatatttctatcatactctct 8040394  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||||||||    
T  8040393 caaccactagattatttttt 8040374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 15183354 - 15183264
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  15183354 aaaatcgtacgctaacaagttttccggcaacaaccatggtggtgtgtggtggtgcagtggtggtcaaaatggttgttgaatttgtgattta 15183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 33284072 - 33283971
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| ||||||||||||||    
T  33284072 aggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctct 33283973  T
Q  498 ca 499  Q
    ||    
T  33283972 ca 33283971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 39950404 - 39950451
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39950404 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 403 - 499
Target Start/End: Original strand, 33283169 - 33283265
Alignment:
Q  403 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 499  Q
    |||||||||||||||||||  |||||| ||||| |||||||||| |  |  ||  |||||||| |||||||||| ||||| ||||||||||||||||    
T  33283169 ccatttaatttgggaaaggttagttttatcccatcatgggaaaggtttttttgaccattagatcaaatgaggaacacatttttatcatactctctca 33283265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 687121 - 687221
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatg----------gtggtcaaagtggttgttgaatttgtgattt 664  Q
    ||||| |||| |||||||||||| |  ||||||||||| ||||||||||||||||| ||          |||||||||||||||||||||||||||||||    
T  687121 aaaattgtacgctaacaagtttttcagcagcaaccatggtggtgtgtggtggtgcagtgatggtgtgtggtggtcaaagtggttgttgaatttgtgattt 687220  T
Q  665 a 665  Q
    |    
T  687221 a 687221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 2319266 - 2319313
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  2319266 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 2319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 4607470 - 4607513
Alignment:
Q  405 atttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  4607470 atttaatttgggaaagtagacttttttcccaccatgggaaagtt 4607513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 399 - 501
Target Start/End: Complemental strand, 16971081 - 16970979
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||   |||||||||||| |||||||||||   |  |   ||||||||  ||||| ||||||| ||||||||||||| |||    
T  16971081 ggtgccatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccctc 16970982  T
Q  499 aac 501  Q
    |||    
T  16970981 aac 16970979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 686671 - 686591
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgca----------atggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| |||||||||||||||||           ||||||||||||||||||||||||||||||||||    
T  686671 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtgtgtggtggtcaaagtggttgttgaatttgtgattta 686591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 4608638 - 4608589
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  4608638 ggtgccatttaatctgggaaaggaatgttatttcccaccatgggaaagtt 4608589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 13654932 - 13654981
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  13654932 aggtgacatttaatttgggaaaggagacttctttcccaccataggaaagt 13654981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Original strand, 15183857 - 15183890
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  15183857 tggtggtcaaagtggttgttgaatttgtgattta 15183890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 2320016 - 2319968
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| ||||||||||||||||||  |||||||||||||||| ||||||    
T  2320016 aggtggcatttaatttgggaaaggctagttttttcccaccataggaaag 2319968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 26268343 - 26268391
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  26268343 aggtggcatttaatttgggaaatgttagttttttcccaccatgggaaag 26268391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 426 - 478
Target Start/End: Original strand, 33685772 - 33685824
Alignment:
Q  426 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaata 478  Q
    |||||||||||||||  ||||||||| |||| ||||||||||||||| |||||    
T  33685772 ttttttcccaccatgtaaaagttgattatgtccattagattaaatgaagaata 33685824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 39950480 - 39950444
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttccca 435  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39950480 ggtgccatttaatttgggaaaggagagttctttccca 39950444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 449
Target Start/End: Complemental strand, 13404752 - 13404701
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttg 449  Q
    ||||| ||||||||||||||| |||   ||||||||||||||||||||||||    
T  13404752 aggtggcatttaatttgggaacggactcttttttcccaccatgggaaagttg 13404701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Complemental strand, 26269069 - 26269022
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  26269069 ggtggcatttaatttgggaaaggttagttttttcccatcatgggaaag 26269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 686701 - 686667
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  686701 ggtgccatttaatttgggaaaggagagttctttcc 686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 2458403 - 2458353
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| ||||||    
T  2458403 aggtgccgtttaatttgggaaatgagactttttttccaccatggaaaagtt 2458353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 8226641 - 8226690
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||||| |||||    
T  8226641 aggtgccatttaatttgagaaagaagaattttttccctccatggaaaagt 8226690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 31148493 - 31148444
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||| ||||||||||||||| | | |||||||||| ||||||||||||    
T  31148493 ggtgccgtttaatttgggaaagcacacttttttcccatcatgggaaagtt 31148444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 445
Target Start/End: Complemental strand, 39167483 - 39167442
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaa 445  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  39167483 catttaatttgggaaaggagacttctttcccatcatgggaaa 39167442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 458 - 538
Target Start/End: Original strand, 42518811 - 42518891
Alignment:
Q  458 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-ttttacactatcttccaccctctct 538  Q
    |||||||||||||||| || | ||||||||| |||| |||||| ||||| |||||| ||||| ||||| || ||||||||||    
T  42518811 cattagattaaatgagaaacaaattcttatcgtactatctcaa-cactaaattattgttttatactatttttcaccctctct 42518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 26688166 - 26688214
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  26688166 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26688214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 26957897 - 26957945
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  26957897 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 1e-61; HSPs: 87)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 399 - 555
Target Start/End: Complemental strand, 39523319 - 39523164
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  39523319 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgaggaatacatctttaccatactctctc 39523220  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39523219 aa-cactaaattattttttacactatcttccaccctctctctttcatgttctcacac 39523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 11417686 - 11417836
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  11417686 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 11417785  T
Q  498 caaccactagattat-tttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  11417786 caaccactagattatatttttatactatctttcacactctctctttcatgt 11417836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 26611332 - 26611182
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  26611332 aggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 26611233  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  26611232 caaccactagattatttttttatactatcttttacactctctctttcatgt 26611182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 10425108 - 10424958
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  10425108 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaatatattcctatcatactctct 10425009  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  10425008 caaccactagattatttttttatattatctttcacactctctctttcatgt 10424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 21166424 - 21166274
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  21166424 aggtgccatttaatttgagaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 21166325  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  21166324 caaccactagattatttttttatactatctttcacactctctctttcatgt 21166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 29651381 - 29651231
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||| | |||| |||||||||||||    
T  29651381 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctct 29651282  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  29651281 caaccactagattatttttttatactatctttcacactctctctttcatgt 29651231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 10424123 - 10424272
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  10424123 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 10424222  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  10424223 aaccactagattatttttttatactatctttcacactctctctttcatgt 10424272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 403 - 555
Target Start/End: Complemental strand, 38143781 - 38143628
Alignment:
Q  403 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 502  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| | |||| ||||||||||||||||||    
T  38143781 ccatttaatttgggaaatgagagttctttcccaccatgggaaagttggtcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 38143682  T
Q  503 actagattatt-ttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| |||||||    
T  38143681 actagattatttttttatactatctttcacactctctctttcatgtcctcacac 38143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 45230365 - 45230514
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  45230365 ggtgccatttaattcgggaaaagagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 45230464  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  45230465 aaccactagattatttttttatactatctttcacactctctctttcatgt 45230514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 36865765 - 36865616
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  36865765 ggtgacatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 36865666  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  36865665 aaccactagattatttttttatactatcttttacactctctctttcatgt 36865616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 399 - 517
Target Start/End: Complemental strand, 11417985 - 11417867
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  11417985 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 11417886  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  11417885 aaccactagattatttttt 11417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 404 - 547
Target Start/End: Original strand, 26610350 - 26610495
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 503  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  26610350 catttaatttgggaaatgagagttctttcccaccatgggaaaattgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 26610449  T
Q  504 ctagatta--ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  26610450 ctagattattttttttatactatctttcacactctctctttcatgt 26610495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 38695002 - 38694850
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||| | |||| ||||||||||||||    
T  38695002 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatgtctattagattaaatgaggaaaatattcatatcatactctctc 38694903  T
Q  499 aaccactagattatttttt---ac-actatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||||   || |||||||| ||| |||||||||||||||    
T  38694902 aaccactagattatttttttatactactatctttcacactctctctttcatgt 38694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 45236008 - 45235859
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | |||  ||||||| ||||||    
T  45236008 ggtgccatttaatttggaaaaggagagttctttcccaccatgggaaagttaatcatgtccattagattaaatgaggaacatatttctatcatattctctc 45235909  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  45235908 aaccactagattatttttttatactatctttcacactctctctttcatgt 45235859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 31836510 - 31836390
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  31836510 gaggtgccatttaatttgagaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctc 31836411  T
Q  497 tcaaccactagattatttttt 517  Q
    |||||||||||||||||||||    
T  31836410 tcaaccactagattatttttt 31836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 400 - 547
Target Start/End: Original strand, 29650416 - 29650564
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 499  Q
    |||||||||||||||||||| ||||||| ||| ||| | |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||    
T  29650416 gtgccatttaatttgggaaatgagagttcttttccatcttgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 29650515  T
Q  500 accactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||| ||||||| |||||||| ||| |||||| ||||||||    
T  29650516 accactagattatttttttatactatctttcacactctctttttcatgt 29650564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 399 - 517
Target Start/End: Original strand, 38694702 - 38694820
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  38694702 ggtgccatttaatttggaaaaggagagttctttcccagcatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 38694801  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  38694802 aaccactagattatttttt 38694820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 21165447 - 21165596
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||| |||| |||||||||||||| | |||  ||||||||||||||    
T  21165447 ggtgccatttaatttgggaaagaatagttctttcccaccatgagaaagttgatcatgtccatttgattaaatgaggaacatatttctatcatactctctc 21165546  T
Q  499 aaccactagatt-attttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||| |||||||| |||||||| |||  ||||||||||||||    
T  21165547 aaccactagattaattttttatactatctttcacagtctctctttcatgt 21165596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 398 - 517
Target Start/End: Complemental strand, 9939420 - 9939301
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  9939420 aggtgccatttaatttgagaaaggggagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 9939321  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||| ||||||||||    
T  9939320 caaccactatattatttttt 9939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 39522374 - 39522524
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| ||||||||||||||||||| |||| |||  ||||||||||||||||||||| | ||||||||||||||||||| | |||| |||||||||||||    
T  39522374 aggtgtcatttaatttgggaaaggatagttctttttcaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctct 39522473  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||| ||||||| |||||||| | | ||| |||||||||||    
T  39522474 caaccactagattatttttttatactatctttcgcactccctctttcatgt 39522524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 31835148 - 31835297
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||  |||| | |||| ||||||||||| ||||||||||| |||| |||||||||||| |||||| | |||| ||||||||||||||    
T  31835148 ggtgccatttaatttgaaaaagtatagttctttcccaccataggaaagttgattatgtccattagattaaacgaggaacatattcctatcatactctctc 31835247  T
Q  499 aaccactagattat-tttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  31835248 aaccactagattatctttttatactatctttcacactctctctttcatgt 31835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 400 - 517
Target Start/End: Original strand, 36864818 - 36864935
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 499  Q
    |||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||||    
T  36864818 gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctca 36864917  T
Q  500 accactagattatttttt 517  Q
    ||||||||||||||||||    
T  36864918 accactagattatttttt 36864935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 560 - 665
Target Start/End: Complemental strand, 39522655 - 39522550
Alignment:
Q  560 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgt 659  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||    
T  39522655 tttgtttgatccttgaaaatggtacgctaacaagtttttcggcagcaaccatggtggtgtgtggtggtgcagtggtggtaaaagtggttgttgaatttgt 39522556  T
Q  660 gattta 665  Q
    ||||||    
T  39522555 gattta 39522550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 398 - 545
Target Start/End: Original strand, 9939124 - 9939269
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| ||||||||||||||||| |||||| |||    | ||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||    
T  9939124 aggtgtcatttaatttgggaaagtagagttcttt---tctatgggaaagttgatcatgtccattagattaaatgagaaacatattcttatcatactctct 9939220  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcat 545  Q
    |||||||||||||| ||||||| |||||||| |||  ||||||||||||    
T  9939221 caaccactagattatttttttatactatctttcacattctctctttcat 9939269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 29651115 - 29651205
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29651115 aaaatcgtacgctaacaagttttccgacagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 29651205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 417 - 517
Target Start/End: Original strand, 38143506 - 38143606
Alignment:
Q  417 aaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttt 516  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  38143506 aaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattttt 38143605  T
Q  517 t 517  Q
    |    
T  38143606 t 38143606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 21165712 - 21165622
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21165712 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 21165622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 36865501 - 36865591
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36865501 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 36865591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 10424842 - 10424932
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  10424842 aaaatcgtacgctaacaagttttccggcagcagccatgatggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttatgattta 10424932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 413 - 547
Target Start/End: Original strand, 25970120 - 25970250
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||| || | ||  ||||||||||||||    |||||||||||    
T  25970120 tgggaaaggggagttgtttcccaccatgggaaagttgat-atgtccattagattaaatgagaaacaaatctttatcatactctct----cactagattat 25970214  T
Q  513 t-ttttacactatcttccaccctctctctttcatgt 547  Q
    | ||||||||||||||||||| ||||||||||||||    
T  25970215 tgttttacactatcttccaccatctctctttcatgt 25970250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 413 - 547
Target Start/End: Complemental strand, 36451461 - 36451327
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||||  ||||| |||| |||||||| ||||||||| |||| |||||||||||||||  || | || |||||| ||||||||||| |||||||||||    
T  36451461 tgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagattaaatgaaaaacaaatccttatcctactctctcaa-cactagattat 36451363  T
Q  513 t-ttttacactatcttccaccctctctctttcatgt 547  Q
    | ||||||||||||||||||| ||||||||||||||    
T  36451362 tgttttacactatcttccaccatctctctttcatgt 36451327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 437 - 555
Target Start/End: Original strand, 11806129 - 11806244
Alignment:
Q  437 catgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctct 536  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||| ||||| ||||||||||| |||||| |||||||||||| |||  | ||  ||||    
T  11806129 catgggaaagttaatcatgtccattagattaaatgaggaacacatttttatcctactctctcaa-cactagtttattttttacattattattca--ctct 11806225  T
Q  537 ctctttcatgttctcacac 555  Q
    |||||||||||||||||||    
T  11806226 ctctttcatgttctcacac 11806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 416 - 547
Target Start/End: Original strand, 23383327 - 23383457
Alignment:
Q  416 gaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatttt 515  Q
    |||||||||||| |||||||||||||||||||| ||  | | |||| ||| |||||| ||| ||| |||||||||||||  ||||  ||||||||| |||    
T  23383327 gaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcatactccatcaat-actagattaattt 23383425  T
Q  516 ttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||||||||||| |||||    
T  23383426 ttacactatcttccaccctctctcttccatgt 23383457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 426 - 547
Target Start/End: Complemental strand, 17648165 - 17648044
Alignment:
Q  426 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-ttttacactat 524  Q
    |||||| |||| ||| |||||||||| || | ||||||||||||| || |||| ||||||||| ||||||||||| ||||| |||||| |||||||||||    
T  17648165 tttttttccactatgtgaaagttgattatatccattagattaaataagaaataaattcttatcttactctctcaa-cactatattattgttttacactat 17648067  T
Q  525 cttccaccctctctctttcatgt 547  Q
    |||||| ||||||||||||||||    
T  17648066 cttccatcctctctctttcatgt 17648044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 26611086 - 26611156
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26611086 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 26611156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 45235763 - 45235833
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45235763 tttccggcaacaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttatgattta 45235833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 413 - 541
Target Start/End: Original strand, 36450742 - 36450871
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||| |||| ||||||||||| || | ||  ||||| ||||||||||  ||||||||| |    
T  36450742 tgggaaaggggagttgttttccaccatgggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctcatacactagattgt 36450841  T
Q  513 t-ttttacactatcttccaccctctctctt 541  Q
    | ||||||||||||||||||| ||||||||    
T  36450842 tgttttacactatcttccaccatctctctt 36450871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 398 - 548
Target Start/End: Complemental strand, 25970852 - 25970701
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||| |||||| | ||||||| | ||||| |||||||||||| |||||||||| |||| ||||  |||||||||| || | ||  ||||| ||||||||    
T  25970852 aggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagttgattatgtccattgaattaaatgagtaacaaatctttatcctactctct 25970753  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcatgtt 548  Q
    ||  ||||||||| || ||||||||||||||||||| |||||||||| ||||    
T  25970752 catacactagattgttgttttacactatcttccaccatctctctttcttgtt 25970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 29650659 - 29650589
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  29650659 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggccaaagtggttgttgaatttgtgattta 29650589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 26610572 - 26610521
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26610572 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 26610521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 10424349 - 10424298
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10424349 tggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 10424298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 575 - 638
Target Start/End: Complemental strand, 26610632 - 26610569
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggt 638  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| |||||||    
T  26610632 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggt 26610569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 47377648 - 47377597
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  47377648 gaggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 47377597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 620 - 665
Target Start/End: Original strand, 31836287 - 31836332
Alignment:
Q  620 gtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  31836287 gtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 31836332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 30808621 - 30808713
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcata 491  Q
    |||| |||||||  ||||||||||||||| |||||||||||||||||||| |   ||  ||||||||||| | | ||||||||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcata 30808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 447
Target Start/End: Original strand, 3847891 - 3847934
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  3847891 catttaatttgggaaaggagacttttttcccaccatgggaaagt 3847934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 614 - 665
Target Start/End: Original strand, 21166197 - 21166248
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||||||||    
T  21166197 tggtgtgtggcggtgtagtggtggtcaaagtggttgttgaatttgtgattta 21166248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 579 - 645
Target Start/End: Complemental strand, 11806310 - 11806244
Alignment:
Q  579 tggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtg 645  Q
    ||||||| |||||||||||||| || |||||||| | ||||||||||||||  ||||||||||||||    
T  11806310 tggtacattaacaagttttccggcaacaaccatggttgtgtgtggtggtgcggtggtggtcaaagtg 11806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 47198603 - 47198653
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  47198603 gaggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagt 47198653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 42544487 - 42544536
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  42544487 aggtgccatttaatttgggaaagaagacttttttcccaccatggaaaagt 42544536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 452
Target Start/End: Original strand, 47376852 - 47376905
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatc 452  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 47376905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 499
Target Start/End: Complemental strand, 38014970 - 38014870
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| | |||||||||||||    
T  38014970 ggtgccgtttaatttgggaaaggctagtttttccccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacattttaatcatactctctc 38014871  T
Q  499 a 499  Q
    |    
T  38014870 a 38014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 625 - 665
Target Start/End: Complemental strand, 45230580 - 45230540
Alignment:
Q  625 ggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  45230580 ggtgcagtggtggtcaaagtggttgttgaatttgtgattta 45230540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 404 - 447
Target Start/End: Complemental strand, 3848621 - 3848578
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  3848621 catttaatttgggaaaggagacttctttcccaccatgggaaagt 3848578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 11680283 - 11680325
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11680283 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11680325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 11688562 - 11688604
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11688562 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11688604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 404 - 446
Target Start/End: Original strand, 25370511 - 25370553
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  25370511 catttaatttgggaaaggctagttttttcccaccatgggaaag 25370553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 28684281 - 28684231
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||| ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  28684281 aggtgacatttaatttgggaaaggagacttttttcctaccataggaaagtt 28684231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Complemental strand, 31835356 - 31835323
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  31835356 tggtggtcaaagtggttgttgaatttgtgattta 31835323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 37275088 - 37275137
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  37275088 ggtgccgtttaatttgggaaaggagacttctttcccaccatgagaaagtt 37275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 46765218 - 46765169
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  46765218 gaggtggcatttaatttgggaaagactagttttttcccaccatgggaaag 46765169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 52757812 - 52757861
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| ||| ||||||||| |||| |||||||    
T  52757812 aggtgccatttaatttgggaaagaagacttttttccctccataggaaagt 52757861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 528
Target Start/End: Original strand, 5825393 - 5825459
Alignment:
Q  458 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttc 528  Q
    |||||||| |||||||||| ||||| ||||| ||||||||||| ||||||   ||||||||||||||||||    
T  5825393 cattagatcaaatgaggaacacattattatcctactctctcaa-cactag---attttttacactatcttc 5825459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 25371593 - 25371545
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||||||||||||| || |||||||||||| ||||||    
T  25371593 ggtgacatttaatttgggaaaggagacttctttcccaccatgagaaagt 25371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 638
Target Start/End: Complemental strand, 10424389 - 10424346
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggt 638  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  10424389 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggt 10424346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 398 - 500
Target Start/End: Original strand, 12589286 - 12589388
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtt-----cattagattaaatgaggaatacattcttatcatac 492  Q
    ||||| |||||||||||||||||   ||||||||||||| |||||||||     || |||     ||||||||||||||| |||||||||| ||||||||    
T  12589286 aggtgacatttaatttgggaaagattagttttttcccactatgggaaag-----caagtttcaaccattagattaaatgaagaatacattcatatcatac 12589380  T
Q  493 tctctcaa 500  Q
    || |||||    
T  12589381 tccctcaa 12589388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 447
Target Start/End: Original strand, 55159177 - 55159228
Alignment:
Q  396 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||  |||||||||||||||||||| || ||||| |||||||||||||    
T  55159177 ggaggtggtatttaatttgggaaaggagacttctttcctaccatgggaaagt 55159228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 10424419 - 10424385
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  10424419 ggtgccatttaatttgggaaaggagagttctttcc 10424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 12590244 - 12590202
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||  |||||||| ||||||||||||||||    
T  12590244 tttaatttgggaaaggctagtttttttccaccatgggaaagtt 12590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 21166137 - 21166171
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  21166137 ggtgccatttaatttgggaaaggagagttctttcc 21166171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 23425256 - 23425206
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||| |||||| | |||||| |||||||| ||||||||||||||||||||    
T  23425256 aggtggcatttagtatgggaatggagagttgtttcccaccatgggaaagtt 23425206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 25655680 - 25655638
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||   |||||||||||||||||||||||||    
T  25655680 tttaatttgggaaagactagttttttcccaccatgggaaagtt 25655638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 29650689 - 29650655
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  29650689 ggtgccatttaatttgggaaaggagagttctttcc 29650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 31836221 - 31836255
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  31836221 ggtgccatttaatttgggaaaggagagttctttcc 31836255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 31910553 - 31910603
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||| |||||||||| |||||||   ||||||||||||||||||||||||    
T  31910553 aggtgtcatttaatttaggaaaggcttgttttttcccaccatgggaaagtt 31910603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 631 - 665
Target Start/End: Complemental strand, 36865024 - 36864990
Alignment:
Q  631 atggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||| |||||||    
T  36865024 atggtggtcaaagtggttgttgaatttatgattta 36864990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 45235733 - 45235767
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  45235733 ggtgccatttaatttgggaaaggagagttctttcc 45235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 30478308 - 30478357
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  30478308 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 30478357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 42545611 - 42545562
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||||||| | | |||||||||| ||| ||||||||    
T  42545611 ggtgccatttaatttgggaaagtacacttttttcccatcataggaaagtt 42545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 47199444 - 47199395
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| |||||||||||||||| |||| || ||||||||||| |||||||    
T  47199444 aggtggcatttaatttgggaaaagagacttctttcccaccataggaaagt 47199395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 48013316 - 48013365
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  48013316 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 48013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 55160115 - 55160067
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| |||||||||||||||||||||  |||||| ||||||||||||||    
T  55160115 aggtggcatttaatttgggaaaggaga-ctttttctcaccatgggaaagt 55160067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 11681323 - 11681275
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  11681323 aggtggcatttaatttggaaaagactagttttttcccaccatgggaaag 11681275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 11689602 - 11689554
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  11689602 aggtggcatttaatttggaaaagactagttttttcccaccatgggaaag 11689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 482 - 530
Target Start/End: Complemental strand, 20822754 - 20822706
Alignment:
Q  482 tcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    ||||||| ||||||||  | ||||| |||||||||||||||||||||||    
T  20822754 tcttatcgtactctctttaacactatattattttttacactatcttcca 20822706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 443
Target Start/End: Complemental strand, 23865365 - 23865321
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatggga 443  Q
    |||||| ||||||||| ||||||||| || |||||||||||||||    
T  23865365 ggtgccgtttaatttgtgaaaggagacttgtttcccaccatggga 23865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 52758757 - 52758709
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||||| |  ||||||||| || ||||||||||||    
T  52758757 gtgccatttaatttgggaaatgctagttttttctcatcatgggaaagtt 52758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 1e-58; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 401 - 547
Target Start/End: Original strand, 3542816 - 3542963
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 500  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  3542816 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaa 3542915  T
Q  501 ccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  3542916 ccactagattatttttttaaactatctttcacactctctctttcatgt 3542963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 399 - 555
Target Start/End: Complemental strand, 33480676 - 33480519
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  33480676 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 33480577  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||||||||| |||||    
T  33480576 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 33480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 399 - 517
Target Start/End: Complemental strand, 3543111 - 3542993
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 3543012  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  3543011 aaccactagattatttttt 3542993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 15083366 - 15083217
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  15083366 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 15083267  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  15083266 aaccactagattatttttttatactatctttcacactctctctttcatgt 15083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 22579935 - 22580084
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  22579935 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 22580034  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    || |||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  22580035 aatcactagattatttttttatactatctttcacactctctctttcatgt 22580084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 33018167 - 33018316
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||    
T  33018167 ggtgccatttaatttgggaaaggagagttctttcccatcattggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctc 33018266  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||| ||||||| ||||||| |||||||| ||| |||||||||||||||    
T  33018267 aaccattagattatttttttatactatctttcacactctctctttcatgt 33018316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 401 - 547
Target Start/End: Original strand, 33479698 - 33479846
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 500  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||    
T  33479698 tgccatttaatttgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaa 33479797  T
Q  501 ccactagatta--ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||  ||||||| |||||||| ||| |||||| ||||||||    
T  33479798 ccactagattattttttttatactatctttcacactctctatttcatgt 33479846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 404 - 547
Target Start/End: Original strand, 15082402 - 15082546
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 503  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  15082402 catttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 15082501  T
Q  504 ctagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||| ||||||| |||||||| ||| |||||||||||||||    
T  15082502 ctagattatttttttatactatctttcacactctctctttcatgt 15082546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 517
Target Start/End: Complemental strand, 33018466 - 33018346
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  33018466 gaggtgtcgtttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctc 33018367  T
Q  497 tcaaccactagattatttttt 517  Q
    |||||||||||||||||||||    
T  33018366 tcaaccactagattatttttt 33018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 398 - 537
Target Start/End: Original strand, 7193337 - 7193474
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||    
T  7193337 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatattcttatcatactctct 7193436  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctc 537  Q
    |||||   |||||| ||||||| |||||||| ||| |||||    
T  7193437 caacc---agattatttttttatactatctttcacactctc 7193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 403 - 543
Target Start/End: Complemental strand, 22587354 - 22587213
Alignment:
Q  403 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 502  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22587354 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22587255  T
Q  503 actagattatt-ttttacactatcttccaccctctctctttc 543  Q
    ||||||||||| ||||| |||||||| ||| |||||||||||    
T  22587254 actagattatttttttatactatctttcacactctctctttc 22587213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 398 - 517
Target Start/End: Complemental strand, 7193627 - 7193508
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    ||||||||||||||||| ||||| |||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||| |||  |||||||||||||    
T  7193627 aggtgccatttaatttgagaaagtagagttcttttccatcatgggaaagttgatcatatccattagattaaatgaggaatatatttctatcatactctct 7193528  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||||||||    
T  7193527 caaccactagattatttttt 7193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 15083101 - 15083191
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15083101 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 15083191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 22580200 - 22580110
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  22580200 aaaatcgtacgctaacaagttttccggcagcaaccatgatggtgtgtggtggtgcagtggtggtcaaagtagttgttgaatttgtgattta 22580110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 403 - 506
Target Start/End: Complemental strand, 22582523 - 22582420
Alignment:
Q  403 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 502  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22582523 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22582424  T
Q  503 acta 506  Q
    ||||    
T  22582423 acta 22582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 33479942 - 33479872
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33479942 tttccgacagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 33479872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 22580627 - 22580697
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22580627 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 22580697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 22587113 - 22587183
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22587113 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 22587183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 595 - 665
Target Start/End: Complemental strand, 15082642 - 15082572
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  15082642 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtagttgttgaatttgtgattta 15082572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 24125972 - 24126021
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 24126021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 452
Target Start/End: Complemental strand, 24126766 - 24126713
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatc 452  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  24126766 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 24126713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 7159390 - 7159341
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| | | |||||||||| |||||||||||    
T  7159390 aggtgccatttaatttgggaaagcaaacttttttcccatcatgggaaagt 7159341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Original strand, 33480468 - 33480501
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  33480468 tggtggtcaaagtggttgttgaatttgtgattta 33480501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 7531829 - 7531877
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||||||||||||| || ||||| |||||||||||||    
T  7531829 ggtggcatttaatttgggaaaggagacttctttcctaccatgggaaagt 7531877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 404 - 446
Target Start/End: Original strand, 10607406 - 10607448
Alignment:
Q  404 catttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||||||||||||||||   |||||||||||||||||||||||    
T  10607406 catttaatttgggaaagactagttttttcccaccatgggaaag 10607448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 10608361 - 10608319
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  10608361 tttaatttgggaaaggctggttttttcccaccatgggaaagtt 10608319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 447
Target Start/End: Complemental strand, 14337607 - 14337557
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  14337607 gaggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 14337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 15082672 - 15082638
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  15082672 ggtgccatttaatttgggaaaggagagttctttcc 15082638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 22580597 - 22580631
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  22580597 ggtgccatttaatttgggaaaggagagttctttcc 22580631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 22587083 - 22587117
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  22587083 ggtgccatttaatttgggaaaggagagttctttcc 22587117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 33479972 - 33479938
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  33479972 ggtgccatttaatttgggaaaggagagttctttcc 33479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 499
Target Start/End: Complemental strand, 1035452 - 1035351
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||| |||||  | |||||||||| |||||||||| |  |  ||  | |||||| ||||||| || ||||| | ||||||||||||    
T  1035452 aggtgccatttaatttggaaaaggttaattttttcccatcatgggaaagatttttttgaccgttagatcaaatgagaaacacattttaatcatactctct 1035353  T
Q  498 ca 499  Q
    ||    
T  1035352 ca 1035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 7532489 - 7532440
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||||||||||||||||| || |||  ||||||||||||||    
T  7532489 aggtggcatttaatttgggaaaggagacttctttttcaccatgggaaagt 7532440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 424 - 472
Target Start/End: Complemental strand, 4311211 - 4311163
Alignment:
Q  424 agttttttcccaccatgggaaagttgatcatgttcattagattaaatga 472  Q
    |||||||||||||||||||| ||||||| |||| |||| ||| ||||||    
T  4311211 agttttttcccaccatgggagagttgattatgtgcattggatcaaatga 4311163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 9574619 - 9574571
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||| ||||||||||||| || ||||||||||| |||||||    
T  9574619 ggtggcatttaacttgggaaaggagacttctttcccaccataggaaagt 9574571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 25067884 - 25067796
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaac 501  Q
    |||||||||| | || ||||||||||| ||||||||| |  ||| |||| ||| |||| || |||||| |||||| ||| |||||||||    
T  25067884 tgggaaaggatatttgtttcccaccataggaaagttgtttttgtccattggatcaaataagaaatacaatcttattatagtctctcaac 25067796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 397 - 547
Target Start/End: Complemental strand, 210 - 58
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||||||||||||    
T  210 gaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgattatgttcattagattaaatgaggaacatattcctatcatactctc 111  T
Q  497 tcaaccactagattatt--ttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||  ||||| |||||||| ||| |||||||||||||||    
T  110 tcaaccactagattattttttttatactatctttcacactctctctttcatgt 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 634 - 665
Target Start/End: Original strand, 1 - 32
Alignment:
Q  634 gtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||    
T  1 gtggtcaaagtggttgttgaatttgtgattta 32  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 21472002 - 21471853
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 21471903  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  21471902 aaccactagattatttttttatactatctttcacactctctctttcatgt 21471853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 21471016 - 21471166
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| |||||||||||||    
T  21471016 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctct 21471115  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    || ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  21471116 cagccactagattatttttttatactatctttcacactctctctttcatgt 21471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 397 - 547
Target Start/End: Original strand, 38834385 - 38834536
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 496  Q
    ||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  38834385 gaggtgccatttaatttgggaaaggagggtactttcccaccacgggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctc 38834484  T
Q  497 tcaaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38834485 tcaaccactagattatttttttatactatctttcacactctctctttcatgt 38834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 398 - 517
Target Start/End: Original strand, 37547997 - 37548116
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  37547997 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 37548096  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||||||||    
T  37548097 caaccactagattatttttt 37548116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 399 - 513
Target Start/End: Original strand, 14573261 - 14573374
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 14573360  T
Q  499 aaccactagattatt 513  Q
    || ||||||||||||    
T  14573361 aa-cactagattatt 14573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 4479750 - 4479603
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  4479750 ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatgaggaacatattcttatcatactctctc 4479651  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
     | ||||| ||||||||||| | |||||| || | ||||||||||||||    
T  4479650 ca-cactaaattattttttatattatctttcatcatctctctttcatgt 4479603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 398 - 517
Target Start/End: Complemental strand, 38834685 - 38834566
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||| | |||  |||||||||||||    
T  38834685 aggtgccatttaatttgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccattagattaaatgaagaacatatttctatcatactctct 38834586  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||||||||    
T  38834585 caaccactagattatttttt 38834566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 399 - 517
Target Start/End: Original strand, 13134318 - 13134436
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||| | |||  ||||||||||| ||    
T  13134318 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattaaattaaatgaggaacatatttctatcatactctatc 13134417  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  13134418 aaccactagattatttttt 13134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 398 - 516
Target Start/End: Complemental strand, 14574048 - 14573930
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| | |||||||||||||||| || | |||| |||||||||||||    
T  14574048 aggtgccatttaatttgggaaaggagagttctttcccaccataagaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctct 14573949  T
Q  498 caaccactagattattttt 516  Q
    ||||||||||||| |||||    
T  14573948 caaccactagattgttttt 14573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 575 - 664
Target Start/End: Original strand, 21471737 - 21471826
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattt 664  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  21471737 aaaatcgtacgctaacaagttttccggcagcaaccatggtggggtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattt 21471826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 21471243 - 21471192
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21471243 tggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 21471192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 33433208 - 33433160
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  33433208 ggtgccgtttaatttgagaaaggagagttctttcccaccatgggaaagt 33433160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 621 - 665
Target Start/End: Complemental strand, 37548219 - 37548175
Alignment:
Q  621 tggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||    
T  37548219 tggtagtgcagtggtggtcaaagtggttgttgaatttgtgattta 37548175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 424 - 479
Target Start/End: Complemental strand, 30486964 - 30486909
Alignment:
Q  424 agttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatac 479  Q
    |||||||||||||||||||||||||||| |||| |||| ||| |||||| ||||||    
T  30486964 agttttttcccaccatgggaaagttgattatgtgcattggatcaaatgaagaatac 30486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 397 - 447
Target Start/End: Original strand, 5276463 - 5276513
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  5276463 gaggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 5276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 435
Target Start/End: Complemental strand, 1164825 - 1164788
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttccca 435  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1164825 aggtgccatttaatttgggaaaggagagttctttccca 1164788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 16426553 - 16426602
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  16426553 ggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 16426602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 40992222 - 40992271
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||||||||   ||||||||| ||||||||||||||    
T  40992222 ggtgccatttaatttgggaaaggtttgttttttcctaccatgggaaagtt 40992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 446
Target Start/End: Original strand, 41984726 - 41984774
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||||||    
T  41984726 aggtggcatttaatttgggaaaggctagttttttctcaccatgggaaag 41984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 2650227 - 2650278
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  2650227 gaggtgccgtttaatttgggaaatgagacttttttcccatcatggaaaagtt 2650278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 4478936 - 4478990
Alignment:
Q  484 ttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 539  Q
    ||||||||||||||| || |||||||||||||||| |||||||| || ||||||||    
T  4478936 ttatcatactctctccac-actagattattttttatactatctttcatcctctctc 4478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 11256766 - 11256696
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  11256766 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 11256696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 24727820 - 24727870
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||| | | |||||||||| ||||| ||||||    
T  24727820 aggtgccatttaatttgggaaagcacacttttttcccatcatggaaaagtt 24727870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 441
Target Start/End: Complemental strand, 24741853 - 24741811
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgg 441  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  24741853 ggtgccgtttaatttgggaaagaagacttttttcccaccatgg 24741811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 30545484 - 30545434
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||||||||||  |||| |||||||  |||||||||||    
T  30545484 aggtgccatttaatttgggaaagggaagttgtttcccatgatgggaaagtt 30545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 4478850 - 4478899
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  4478850 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 4478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 19521966 - 19521917
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  19521966 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 19521917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 41043378 - 41043329
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||| ||||    
T  41043378 gaggtggcatttaatttgggaaaggctagttttttcccatcatggaaaag 41043329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 451
Target Start/End: Original strand, 30544727 - 30544779
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgat 451  Q
    ||||||||||||||||||||| |  |||| |||||||  ||||||||||||||    
T  30544727 ggtgccatttaatttgggaaatggaagttgtttcccatgatgggaaagttgat 30544779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 43737729 - 43737878
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  43737729 ggtgccatttaatttgggaaagtagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 43737828  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| |||||||||||||||| |||  ||||||||| ||||    
T  43737829 aaccactagattatttttttacactatctttcacattctctctttgatgt 43737878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 16270207 - 16270357
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16270306  T
Q  499 aaccactagatta--ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||  ||||||| |||||||| ||| ||| |||||||||||    
T  16270307 aaccactagattattttttttatactatctttcacactccctctttcatgt 16270357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 399 - 517
Target Start/End: Complemental strand, 23440913 - 23440795
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatactctctc 23440814  T
Q  499 aaccactagattatttttt 517  Q
    |||||||||||||||||||    
T  23440813 aaccactagattatttttt 23440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 398 - 545
Target Start/End: Complemental strand, 48972494 - 48972346
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  48972494 aggtgccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 48972395  T
Q  498 caaccactagattatt-ttttacactatcttccaccctctctctttcat 545  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||    
T  48972394 caaccactagattatttttttatactatctttcacactctctctttcat 48972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 9947995 - 9948144
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  9947995 ggtgccatttaatttgggaaagaaaagttctttcccaccatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 9948094  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  9948095 aaccactagattatttttttatactatctttcacactctctctttcatgt 9948144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 399 - 527
Target Start/End: Complemental strand, 9948935 - 9948807
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| ||    
T  9948935 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctatc 9948836  T
Q  499 aaccactagattattttttacactatctt 527  Q
    |||||||||||||||||||| ||||||||    
T  9948835 aaccactagattattttttatactatctt 9948807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 23440617 - 23440765
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| ||||| || |||| ||||||||| |||| |||||||||||||||| || | |||| ||||||||||||||    
T  23440617 ggtgccatttaatttgggaaaggagagttctttccaactatggaaaagttgattatgtccattagattaaatgagaaacatattcctatcatactctctc 23440716  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  23440717 aaccactagattattttttatactatctttcacactctctctttcatgt 23440765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 398 - 547
Target Start/End: Original strand, 51974436 - 51974586
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||| | |||| |||||||||||||    
T  51974436 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacatattcctatcatactctct 51974535  T
Q  498 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||| ||||||||| ||||||| |||||||| |||  ||||||||||||||    
T  51974536 caactactagattatttttttatactatctttcacattctctctttcatgt 51974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 16271196 - 16271047
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||| ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  16271196 ggtgccatttaatttaggaaaggagagttctttctcatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16271097  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| ||||| || ||| |||||||||||||||    
T  16271096 aaccactagattatttttttatactatatttcacactctctctttcatgt 16271047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 413 - 555
Target Start/End: Original strand, 6075988 - 6076127
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||||||||||| ||| | |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||    
T  6075988 tgggaaaggagagttcttttctaccatgagaaagttgatcatgtccattagattaaatgaggaatacatttttatcatagtctctcaa-cactaaattat 6076086  T
Q  513 tttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  6076087 tttttacactatcttcca--ctctctctttcatgttctcacac 6076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 398 - 517
Target Start/End: Complemental strand, 43738027 - 43737908
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 497  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||    
T  43738027 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatattctct 43737928  T
Q  498 caaccactagattatttttt 517  Q
    ||||||||||||||||||||    
T  43737927 caaccactagattatttttt 43737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 399 - 555
Target Start/End: Original strand, 48971705 - 48971862
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  48971705 ggtgtcatttaatttgggaaaggagagttctttcccacaatgagaaagttgatcatataaattagattaaatgaggaacatattcctatcatactctctc 48971804  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    |||||||| |||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  48971805 aaccactatattatttttttatactatctttcacactctctctttcatgttcccacac 48971862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 399 - 547
Target Start/End: Complemental strand, 51975275 - 51975126
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||||     
T  51975275 ggtgccatttaatttgggaaaggagagttctttttcactatgggaaagttgatcatgtcaattagattaaatgaggaacatattcctatcatactctctt 51975176  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  51975175 aaccactagattatttttttatactatctttcacactctctctttcatgt 51975126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 399 - 547
Target Start/End: Original strand, 193850 - 193997
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||| ||||||||||||| | |||||||||||||||||||    
T  193850 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttaatcatgtccattaaattaaatgaggaacatattcttatcatactctctc 193949  T
Q  499 aaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
     | ||||||||||||||||| | |||||| || | ||||||||||||||    
T  193950 ca-cactagattattttttatattatctttcatcatctctctttcatgt 193997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 399 - 545
Target Start/End: Complemental strand, 50827138 - 50826992
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || | ||| |||||||||||||||    
T  50827138 ggtgccatttaatttgagaaaggagagttttt-cccaccatgggaaagttgatcatgtccattagattaaatgagaaacatatttttatcatactctctc 50827040  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcat 545  Q
    |||||||| |||| ||||||| | |||||| ||| |||||||||||||    
T  50827039 aaccactaaattatttttttatagtatctttcacactctctctttcat 50826992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 399 - 555
Target Start/End: Original strand, 38930312 - 38930469
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| ||||||||||||||||||| |||| |||  ||||||||||||||||||||| | ||||| ||||||| ||||| | |||| ||||||||||||||    
T  38930312 ggtgtcatttaatttgggaaaggaaagttctttttcaccatgggaaagttgatcatatccattaaattaaataaggaacatattcctatcatactctctc 38930411  T
Q  499 aaccactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 555  Q
    ||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  38930412 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 38930469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 560 - 665
Target Start/End: Original strand, 6076636 - 6076741
Alignment:
Q  560 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgt 659  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||  ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  6076636 tttgtttgatccttgaaaatggtacattaacaagttttccggcagcaaccatagtggtgtgtggtggtgcagtggtgatcaaagtggttgttgaatttgt 6076735  T
Q  660 gattta 665  Q
    ||||||    
T  6076736 gattta 6076741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 423 - 547
Target Start/End: Original strand, 12925897 - 12926020
Alignment:
Q  423 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 522  Q
    ||||||||| ||||||| | ||||||||| |||| |||||||||||||| |||||||||||||||  ||||||||||| || ||||||||||||||||||    
T  12925897 gagtttttttccaccatagaaaagttgataatgtccattagattaaatgtggaatacattcttatactactctctcaa-cattagattattttttacact 12925995  T
Q  523 atcttccaccctctctctttcatgt 547  Q
    |||||||||||||||||||||||||    
T  12925996 atcttccaccctctctctttcatgt 12926020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 413 - 547
Target Start/End: Complemental strand, 6076901 - 6076767
Alignment:
Q  413 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 512  Q
    ||||||| ||||||| |||||||| |||| |||||||||||||| ||||| |||||||||| || | |||| ||||||||||||||||||| ||||||||    
T  6076901 tgggaaatgagagttctttcccactatggaaaagttgatcatgtccattatattaaatgagtaacatattcctatcatactctctcaaccaatagattat 6076802  T
Q  513 tttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| |||||||| ||| |||||||||||||||    
T  6076801 tttttatactatctttcacactctctctttcatgt 6076767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 423 - 547
Target Start/End: Original strand, 20794313 - 20794436
Alignment:
Q  423 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 522  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||||||||| |||| ||||||||||   |||||||||| || ||||||||||||||||||    
T  20794313 gagtttttttccaccataggaaagttgataatgtgcattagattaaatgtggaacacattcttatatcactctctcaa-cattagattattttttacact 20794411  T
Q  523 atcttccaccctctctctttcatgt 547  Q
    || ||||||||||||||||||||||    
T  20794412 attttccaccctctctctttcatgt 20794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 417 - 547
Target Start/End: Original strand, 47334217 - 47334347
Alignment:
Q  417 aaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-tt 515  Q
    ||||| ||||| |||||||| |||||||||||||| |||| |||||||||||||||| || | || |||||| ||||||||||| |||||||||||| ||    
T  47334217 aaaggggagttgtttcccacaatgggaaagttgattatgtccattagattaaatgagaaacaaatccttatcctactctctcaa-cactagattattgtt 47334315  T
Q  516 ttacactatcttccaccctctctctttcatgt 547  Q
    ||||||||||||||||| ||||||||||||||    
T  47334316 ttacactatcttccaccatctctctttcatgt 47334347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 575 - 665
Target Start/End: Original strand, 38931029 - 38931119
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38931029 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 38931119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 434 - 547
Target Start/End: Original strand, 17050488 - 17050600
Alignment:
Q  434 caccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccc 533  Q
    |||||||||||||||||| ||||||||||||||||||  || | ||||||||||  |||||||||||  | |||||||||||||||||||||||||||||    
T  17050488 caccatgggaaagttgataatgttcattagattaaatatggtacacattcttatactactctctcaat-attagattattttttacactatcttccaccc 17050586  T
Q  534 tctctctttcatgt 547  Q
    ||||||||||||||    
T  17050587 tctctctttcatgt 17050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 575 - 665
Target Start/End: Complemental strand, 16270473 - 16270383
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||| |||| |||||||||||||||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16270473 aaaatcgtacgctaacaagttttccggaagcaaccatggtggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 16270383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 423 - 547
Target Start/End: Complemental strand, 31390847 - 31390726
Alignment:
Q  423 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 522  Q
    ||||| ||||||||||||||||||||||| |||| |||| || ||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  31390847 gagttctttcccaccatgggaaagttgattatgtccattggaataaatgaggaacacatttttatcctactctctcaa-cattagattattttttacact 31390749  T
Q  523 atcttccaccctctctctttcatgt 547  Q
    ||||| ||  |||||||||||||||    
T  31390748 atctttca--ctctctctttcatgt 31390726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 401 - 547
Target Start/End: Complemental strand, 38931293 - 38931145
Alignment:
Q  401 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 500  Q
    |||||||||||||||||||| |||||| ||| | |||||||||||||||||||| | ||||| ||||||| || || | |||  ||||||||||||||||    
T  38931293 tgccatttaatttgggaaagaagagttcttttctaccatgggaaagttgatcatatccattaaattaaataagaaacatatttctatcatactctctcaa 38931194  T
Q  501 ccactagatta--ttttttacactatcttccaccctctctctttcatgt 547  Q
    |||||| ||||  ||||||| | |||||| ||| |||||||||||||||    
T  38931193 ccactatattattttttttatattatctttcacactctctctttcatgt 38931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 38930538 - 38930487
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38930538 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 38930487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 399 - 548
Target Start/End: Complemental strand, 47334948 - 47334798
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| |||||| | ||||||| | ||||| ||||||||||| ||||||||||| |||| |||| ||||||||||| || | ||  ||||| |||||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctc 47334849  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctctttcatgtt 548  Q
    |  ||||| ||  || ||||||||||||||||||| |||||||||| ||||    
T  47334848 atacactatatcgttgttttacactatcttccaccatctctctttcttgtt 47334798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 493
Target Start/End: Original strand, 27888701 - 27888765
Alignment:
Q  429 tttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatact 493  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  27888701 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 27888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 614 - 665
Target Start/End: Original strand, 16270971 - 16271022
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16270971 tggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 16271022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 614 - 665
Target Start/End: Original strand, 51975049 - 51975100
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51975049 tggtgtgtggtggtgcagtggtggtcaaagtggttgttgaatttgtgattta 51975100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 595 - 665
Target Start/End: Original strand, 9948706 - 9948775
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||| ||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  9948706 tttccggcagcaaccatggtggtgtgtggtggtgtg-tggtggtcaaagtggttgttgaatttgtgattta 9948775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 614 - 665
Target Start/End: Complemental strand, 48971931 - 48971880
Alignment:
Q  614 tggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  48971931 tggtgtgtggtggtgcagtggtggttaaagtggttgttgaatttgtgattta 48971880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 398 - 448
Target Start/End: Original strand, 1012546 - 1012596
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  1012546 aggtgccgtttaatttgggaaaggagatttttttcccaccatgggaaagtt 1012596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 575 - 635
Target Start/End: Complemental strand, 9948248 - 9948188
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggtgcaatggt 635  Q
    ||||| |||| ||||||||||||||| ||||||||||| ||||||||||||||||| ||||    
T  9948248 aaaatcgtacgctaacaagttttccggcagcaaccatggtggtgtgtggtggtgcagtggt 9948188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 434 - 498
Target Start/End: Complemental strand, 40649580 - 40649516
Alignment:
Q  434 caccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||||||||||||||||| |||| |||||||||||||| |||| ||||||||||  |||||||||    
T  40649580 caccatgggaaagttgataatgtccattagattaaatgtggaacacattcttatactactctctc 40649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 51987826 - 51987875
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  51987826 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 51987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 664
Target Start/End: Complemental strand, 17050668 - 17050616
Alignment:
Q  612 gatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattt 664  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||    
T  17050668 gatggtgtatggtggtgcgatggtggtcaaagtggttgctgaatatgtgattt 17050616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 426 - 514
Target Start/End: Original strand, 46133720 - 46133807
Alignment:
Q  426 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattt 514  Q
    ||||| ||||||||||||||||  || |||| ||| ||||||||||||||  ||||||||||  ||||||||||| || ||||||||||    
T  46133720 tttttccccaccatgggaaagtgaattatgtccatcagattaaatgaggagcacattcttatactactctctcaa-cattagattattt 46133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 617 - 665
Target Start/End: Original strand, 48972270 - 48972318
Alignment:
Q  617 tgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattta 665  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||||    
T  48972270 tgtgtggtggtgcagtggtggtcaagatggttgttgaatttgtgattta 48972318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 547
Target Start/End: Original strand, 27418222 - 27418311
Alignment:
Q  458 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 547  Q
    |||||||| |||||| ||  ||| |||| | |||||||||| | ||||| |||||||| ||||||||||||||   ||||||||||||||    
T  27418222 cattagatcaaatgaagagcacactcttgttatactctctcgaacactatattattttatacactatcttccataatctctctttcatgt 27418311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Complemental strand, 35616824 - 35616775
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  35616824 aggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 35616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 447
Target Start/End: Original strand, 45064685 - 45064734
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||||||||||||||||   |||||||||||| |||||||||||    
T  45064685 aggtgccatttaatttgggaaagattagttttttcccatcatgggaaagt 45064734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 49611607 - 49611562
Alignment:
Q  400 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 445  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||    
T  49611607 gtgccatttaatttgggaaaggctagttttttcccatcatgggaaa 49611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 632 - 665
Target Start/End: Complemental strand, 51974645 - 51974612
Alignment:
Q  632 tggtggtcaaagtggttgttgaatttgtgattta 665  Q
    ||||||||||||||||||||||||||||||||||    
T  51974645 tggtggtcaaagtggttgttgaatttgtgattta 51974612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 8560839 - 8560887
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||||||||||||| || ||||||| |||||||||||    
T  8560839 ggtgacatttaatttgggaaaggagacttctttcccatcatgggaaagt 8560887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 612 - 664
Target Start/End: Complemental strand, 12926088 - 12926036
Alignment:
Q  612 gatggtgtgtggtggtgcaatggtggtcaaagtggttgttgaatttgtgattt 664  Q
    |||||||||||| ||||| ||| ||||||||||||||| ||||| ||||||||    
T  12926088 gatggtgtgtggcggtgcgatgttggtcaaagtggttgctgaatatgtgattt 12926036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 49610706 - 49610754
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  49610706 ggtgccattttatttgggaaagaagacttttttccctccatgggaaagt 49610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 51164832 - 51164776
Alignment:
Q  81 tgtaattgatattagcagtaatgaaacggttgggaagataggattgagctgcataaa 137  Q
    |||||||||| || ||||||||| ||| ||| |||| ||||||||||||||||||||    
T  51164832 tgtaattgatgttggcagtaatggaacagttaggaaaataggattgagctgcataaa 51164776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 627
Target Start/End: Complemental strand, 51974691 - 51974639
Alignment:
Q  575 aaaatggtacactaacaagttttccgacagcaaccatgatggtgtgtggtggt 627  Q
    ||||| |||| ||||||| ||||||| ||||||||||| ||||||||||||||    
T  51974691 aaaatcgtacgctaacaaattttccggcagcaaccatggtggtgtgtggtggt 51974639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 51988512 - 51988464
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||    
T  51988512 ggtggcatttaatttgggaaaggagacttcttttccaccatgggaaagt 51988464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 7219068 - 7219138
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||||||| ||||| ||||||| ||| || |||||| ||||||||| || || |||||||||||||    
T  7219068 attagattaaatgaagaatatattcttaacatgctttctcaa-cactagatttttcttcacactatcttcca 7219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 638
Target Start/End: Complemental strand, 38930578 - 38930535
Alignment:
Q  595 tttccgacagcaaccatgatggtgtgtggtggtgcaatggtggt 638  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  38930578 tttccggcagcaaccatggtggtgtgtggtggtgcagtggtggt 38930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Original strand, 51247888 - 51247958
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  51247888 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 51247958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 530
Target Start/End: Complemental strand, 51248509 - 51248439
Alignment:
Q  459 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||| ||| ||| | ||||||| ||||||||||||| ||||||||| || || |||||||||||||    
T  51248509 attagattaagtgaagaacatattcttaacatactctctcaa-cactagatttttcttcacactatcttcca 51248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 1013521 - 1013471
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||| |||||||||||||||||||  ||| ||| ||||||||||||||||    
T  1013521 aggtgtcatttaatttgggaaaggaatgttattttccaccatgggaaagtt 1013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 16270901 - 16270935
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  16270901 ggtgccatttaatttgggaaaggagagttctttcc 16270935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 433
Target Start/End: Complemental strand, 38930608 - 38930574
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcc 433  Q
    ||||||||||||||||||||||||||||| |||||    
T  38930608 ggtgccatttaatttgggaaaggagagttctttcc 38930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 45065435 - 45065385
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    |||||||||||||||||| ||| |   ||||||||||||||||||||||||    
T  45065435 aggtgccatttaatttggaaaaagcttgttttttcccaccatgggaaagtt 45065385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 447
Target Start/End: Complemental strand, 48870795 - 48870753
Alignment:
Q  405 atttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||| |||||||| |||| ||||||||||||||||||||||    
T  48870795 atttaacttgggaaatgagacttttttcccaccatgggaaagt 48870753  T

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Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 530
Target Start/End: Original strand, 37725437 - 37725509
Alignment:
Q  457 tcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 530  Q
    |||||||||||| ||| ||| | ||||||| ||||||||||||| ||||||||| || || ||||||| |||||    
T  37725437 tcattagattaagtgaagaacatattcttaacatactctctcaa-cactagatttttcttcacactattttcca 37725509  T

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Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Complemental strand, 194749 - 194701
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  194749 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 194701  T

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Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 398 - 446
Target Start/End: Complemental strand, 8561785 - 8561737
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||| |||||||||||||||||   |||||||||||| ||||||||||    
T  8561785 aggtgacatttaatttgggaaagactagttttttcccatcatgggaaag 8561737  T

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Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 398 - 490
Target Start/End: Complemental strand, 11032268 - 11032176
Alignment:
Q  398 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcat 490  Q
    ||||| |||||||  ||||||||| || |  ||||||||||||||||||||||   ||  ||||||||||| | | ||| |||||||||||||    
T  11032268 aggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagtaatgaacacattcttatcat 11032176  T

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Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 446
Target Start/End: Original strand, 14924681 - 14924721
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  14924681 tttaatttgggaaagggaagttgtttcccaccatgggaaag 14924721  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 446
Target Start/End: Complemental strand, 14925383 - 14925343
Alignment:
Q  406 tttaatttgggaaaggagagttttttcccaccatgggaaag 446  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  14925383 tttaatttggggaaggaaagttgtttcccaccatgggaaag 14925343  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 399 - 447
Target Start/End: Original strand, 37874064 - 37874112
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 447  Q
    |||| ||||||| |||||||| |||| || |||||||||||||||||||    
T  37874064 ggtgacatttaacttgggaaatgagacttctttcccaccatgggaaagt 37874112  T

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Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 397 - 445
Target Start/End: Original strand, 48869767 - 48869815
Alignment:
Q  397 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 445  Q
    |||||| ||||||| ||||||||||||| || ||| |||||||||||||    
T  48869767 gaggtgacatttaacttgggaaaggagacttcttttccaccatgggaaa 48869815  T

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Target: scaffold0332 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 399 - 542
Target Start/End: Complemental strand, 9306 - 9162
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 498  Q
    |||| |||||||||||| |||||||||||||||  |||||||| |||||| ||||||| ||||||||||||||| ||| | |||||||||||||||||||    
T  9306 ggtgtcatttaatttggaaaaggagagttttttttcaccatggaaaagttcatcatgtccattagattaaatgatgaacatattcttatcatactctctc 9207  T
Q  499 aaccactagattatt-ttttacactatcttccaccctctctcttt 542  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  9206 aaccactagattatttttttatactatctttcacactctctcttt 9162  T

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Target: scaffold0700 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 424 - 538
Target Start/End: Original strand, 5344 - 5457
Alignment:
Q  424 agttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacacta 523  Q
    |||||| |||||| || ||||||| ||| || | |||||||||||||||| || ||||||||||| |||||| || |  ||||||||||||||||   ||    
T  5344 agttttctcccactataggaaagtagattatatccattagattaaatgagaaacacattcttatcctactctttcca-tactagattattttttatgata 5442  T
Q  524 tcttccaccctctct 538  Q
    |||||||| ||||||    
T  5443 tcttccacactctct 5457  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 17339 - 17388
Alignment:
Q  399 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 448  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||    
T  17339 ggtgccatttaatttggaaaaggcttgttttttcccaccatgggaaagtt 17388  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 591 - 627
Target Start/End: Complemental strand, 94500 - 94464
Alignment:
Q  591 aagttttccgacagcaaccatgatggtgtgtggtggt 627  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  94500 aagttttccggcagcaaccatggtggtgtgtggtggt 94464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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