View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19697_low_10 (Length: 298)
Name: NF19697_low_10
Description: NF19697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19697_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 18 - 287
Target Start/End: Original strand, 39370868 - 39371143
Alignment:
| Q |
18 |
tctataactgtgacaaatgcaaacctctcactcaagctgcatgagtgtatgaactttgtgcaaaagagttctcgcagccatggaagaagccccaaaccgt |
117 |
Q |
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| T |
39370868 |
tctataactgtgacaaatgcaaacctctcgctcaagctgcatgagtgtatgaactttgtgcaaaagagttctcgcagccatggaagaagccccaaaccgt |
39370967 |
T |
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| Q |
118 |
gaatttcctcaacaataatggatgatcccacagtaatctatacttcttgtatttggattctagga-----tagttttccaattgacagcatgaactttcc |
212 |
Q |
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| T |
39370968 |
gaatttcctcaacaataatggatgaacccacagtaatctctacttcttgtatttggattctaggatagtttagttttccaattgacagcatgaactttcc |
39371067 |
T |
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| Q |
213 |
tactattctcctgctattgctaaataattcttcccagcaacttctgaa-ttccttcggacagcctttaataatatt |
287 |
Q |
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||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||||||||||||| |
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| T |
39371068 |
tactattctcctgctattgctgaataattcttccctgcaacttctgaatttccttcggagagcctttaataatatt |
39371143 |
T |
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