View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19699_high_14 (Length: 271)
Name: NF19699_high_14
Description: NF19699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19699_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 5e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 39 - 254
Target Start/End: Complemental strand, 22921917 - 22921707
Alignment:
| Q |
39 |
atattcttggtttagatgtgaaatatatatcatttattaatataaatgtcctttcctttgtatggcttaatattacttacgtttaggttatgtttaaacc |
138 |
Q |
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| T |
22921917 |
atattcttggtttagatgtgaaatatatatcatt-attaatattaatgtcctttcctttgtatggcttaatattac----gtttaggttatgtttaaact |
22921823 |
T |
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| Q |
139 |
gatggaatatgatgaaatgagataaaattaaatggaatggaacgagtttatgttccatattgtttagattgaaaatgagaggaggaaattgagtggaata |
238 |
Q |
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| T |
22921822 |
gatggaatatgatgaaatgagataaaattaaatggaatggaacgagtttatgttccatattgtttagattgaaaatgagaggaggaaattgagtggaata |
22921723 |
T |
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| Q |
239 |
atgcatcccatcaata |
254 |
Q |
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|||||||||||||||| |
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| T |
22921722 |
atgcatcccatcaata |
22921707 |
T |
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