View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19699_high_2 (Length: 776)

Name: NF19699_high_2
Description: NF19699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19699_high_2
NF19699_high_2
[»] chr3 (35 HSPs)
chr3 (18-763)||(29111775-29112530)
chr3 (309-763)||(33313537-33313978)
chr3 (18-205)||(33313290-33313469)
chr3 (179-255)||(23870572-23870648)
chr3 (195-257)||(11493372-11493434)
chr3 (195-255)||(8383243-8383303)
chr3 (212-259)||(29508447-29508494)
chr3 (210-259)||(8039844-8039893)
chr3 (209-258)||(12704007-12704056)
chr3 (210-255)||(17005632-17005677)
chr3 (195-259)||(15544679-15544743)
chr3 (195-250)||(2620071-2620126)
chr3 (209-259)||(7928450-7928500)
chr3 (195-253)||(14216878-14216936)
chr3 (195-253)||(14223007-14223065)
chr3 (179-256)||(18426919-18426996)
chr3 (194-259)||(26290356-26290421)
chr3 (202-255)||(34307793-34307846)
chr3 (189-253)||(26508090-26508154)
chr3 (195-259)||(49505163-49505227)
chr3 (209-256)||(10690274-10690321)
chr3 (196-251)||(10954939-10954994)
chr3 (216-259)||(11313809-11313852)
chr3 (216-254)||(11251985-11252023)
chr3 (197-259)||(14618769-14618831)
chr3 (217-259)||(16192759-16192801)
chr3 (194-268)||(22774070-22774144)
chr3 (217-259)||(25093510-25093552)
chr3 (217-259)||(32804549-32804591)
chr3 (212-258)||(48353741-48353787)
chr3 (196-253)||(4987306-4987363)
chr3 (222-259)||(8789559-8789596)
chr3 (216-257)||(9624648-9624689)
chr3 (210-255)||(14840304-14840349)
chr3 (209-254)||(24633766-24633811)
[»] chr5 (34 HSPs)
chr5 (179-259)||(39205850-39205930)
chr5 (179-253)||(39698511-39698585)
chr5 (194-259)||(27144448-27144513)
chr5 (195-259)||(3966489-3966553)
chr5 (216-259)||(6471898-6471941)
chr5 (200-259)||(32630744-32630803)
chr5 (216-259)||(41091266-41091309)
chr5 (194-256)||(6035468-6035529)
chr5 (210-259)||(12264838-12264887)
chr5 (222-267)||(18421842-18421887)
chr5 (222-259)||(24273039-24273076)
chr5 (222-259)||(24389138-24389175)
chr5 (210-259)||(30502397-30502446)
chr5 (210-259)||(30542740-30542789)
chr5 (222-259)||(34879363-34879400)
chr5 (212-257)||(35017040-35017085)
chr5 (216-256)||(12927661-12927701)
chr5 (195-259)||(15410457-15410521)
chr5 (192-255)||(5467991-5468054)
chr5 (195-254)||(6770529-6770588)
chr5 (216-259)||(23012417-23012460)
chr5 (200-255)||(28588687-28588742)
chr5 (212-259)||(33035810-33035857)
chr5 (222-256)||(10022645-10022679)
chr5 (198-256)||(22423824-22423882)
chr5 (217-255)||(23016002-23016040)
chr5 (217-255)||(25863212-25863250)
chr5 (224-258)||(31682048-31682082)
chr5 (179-253)||(42893330-42893404)
chr5 (196-253)||(6247609-6247666)
chr5 (208-253)||(15405070-15405115)
chr5 (207-256)||(17593734-17593783)
chr5 (195-252)||(19438329-19438386)
chr5 (210-259)||(36838544-36838593)
[»] chr4 (30 HSPs)
chr4 (179-259)||(56488519-56488599)
chr4 (195-259)||(36635310-36635374)
chr4 (195-257)||(40179647-40179709)
chr4 (195-262)||(22440606-22440673)
chr4 (179-253)||(4383338-4383411)
chr4 (195-259)||(13783267-13783331)
chr4 (192-256)||(21539879-21539943)
chr4 (209-268)||(5775358-5775417)
chr4 (223-258)||(8402752-8402787)
chr4 (200-259)||(40613441-40613500)
chr4 (209-259)||(3712518-3712568)
chr4 (209-255)||(8423731-8423777)
chr4 (210-256)||(30522927-30522973)
chr4 (209-259)||(40742591-40742641)
chr4 (216-254)||(56257940-56257978)
chr4 (217-258)||(903930-903971)
chr4 (225-258)||(7970535-7970568)
chr4 (195-259)||(35723393-35723458)
chr4 (195-259)||(15029751-15029815)
chr4 (195-251)||(37496690-37496746)
chr4 (216-256)||(37698719-37698759)
chr4 (216-259)||(999357-999400)
chr4 (210-257)||(7214533-7214580)
chr4 (208-255)||(54580036-54580083)
chr4 (216-258)||(35952627-35952669)
chr4 (200-258)||(49652982-49653040)
chr4 (222-259)||(16189722-16189759)
chr4 (222-259)||(18576046-18576083)
chr4 (179-259)||(22234899-22234980)
chr4 (201-250)||(24613719-24613768)
[»] chr2 (35 HSPs)
chr2 (195-253)||(12940950-12941008)
chr2 (195-259)||(20242736-20242800)
chr2 (195-259)||(21616748-21616812)
chr2 (195-259)||(23718012-23718076)
chr2 (195-259)||(24105684-24105748)
chr2 (195-259)||(29970558-29970622)
chr2 (198-253)||(4882711-4882766)
chr2 (216-259)||(34691814-34691857)
chr2 (216-259)||(34714226-34714269)
chr2 (208-259)||(44860319-44860370)
chr2 (195-261)||(16069261-16069327)
chr2 (195-253)||(20539689-20539747)
chr2 (196-254)||(21782832-21782890)
chr2 (217-259)||(30527604-30527646)
chr2 (209-259)||(37411253-37411303)
chr2 (210-259)||(2665897-2665946)
chr2 (214-259)||(5367197-5367242)
chr2 (209-258)||(28677909-28677958)
chr2 (194-255)||(36756357-36756418)
chr2 (209-257)||(24975336-24975384)
chr2 (211-255)||(25846743-25846787)
chr2 (195-259)||(31808063-31808127)
chr2 (195-259)||(34784991-34785055)
chr2 (220-268)||(38355887-38355935)
chr2 (192-243)||(11670738-11670789)
chr2 (209-268)||(18276521-18276580)
chr2 (217-252)||(22084848-22084883)
chr2 (224-259)||(35056883-35056918)
chr2 (223-261)||(15909639-15909677)
chr2 (195-253)||(18841028-18841086)
chr2 (179-249)||(27084232-27084302)
chr2 (217-259)||(35449521-35449563)
chr2 (225-259)||(39279691-39279725)
chr2 (195-253)||(39323250-39323308)
chr2 (209-254)||(1327978-1328023)
[»] chr1 (50 HSPs)
chr1 (185-255)||(36878437-36878507)
chr1 (194-259)||(7918220-7918285)
chr1 (196-259)||(10572598-10572661)
chr1 (179-253)||(1815227-1815301)
chr1 (209-259)||(25361886-25361936)
chr1 (195-253)||(28273103-28273161)
chr1 (209-255)||(34298436-34298482)
chr1 (209-259)||(38503320-38503370)
chr1 (210-259)||(10233254-10233303)
chr1 (194-259)||(13997868-13997933)
chr1 (195-255)||(398778-398838)
chr1 (195-259)||(6427336-6427400)
chr1 (210-258)||(14332652-14332700)
chr1 (195-259)||(17831540-17831604)
chr1 (190-256)||(48148049-48148116)
chr1 (217-259)||(1864889-1864931)
chr1 (195-249)||(2896140-2896194)
chr1 (209-259)||(9828044-9828094)
chr1 (216-262)||(12443466-12443512)
chr1 (194-256)||(16927197-16927259)
chr1 (197-259)||(19324550-19324612)
chr1 (197-259)||(20157359-20157421)
chr1 (195-253)||(24577201-24577259)
chr1 (209-259)||(25098564-25098614)
chr1 (216-258)||(40181878-40181920)
chr1 (198-255)||(1486722-1486779)
chr1 (195-268)||(6415001-6415074)
chr1 (222-259)||(44482243-44482280)
chr1 (194-258)||(8842724-8842788)
chr1 (195-254)||(9033021-9033081)
chr1 (195-255)||(9629913-9629973)
chr1 (194-257)||(5898277-5898340)
chr1 (196-259)||(19562630-19562693)
chr1 (224-259)||(34371728-34371763)
chr1 (200-259)||(39130776-39130835)
chr1 (216-259)||(49872844-49872887)
chr1 (194-267)||(9690275-9690346)
chr1 (195-253)||(22881631-22881689)
chr1 (195-257)||(41500717-41500779)
chr1 (195-257)||(41510895-41510957)
chr1 (195-253)||(42359464-42359522)
chr1 (195-253)||(46348398-46348456)
chr1 (229-259)||(52903269-52903299)
chr1 (210-259)||(9709821-9709870)
chr1 (213-258)||(12707883-12707928)
chr1 (213-258)||(12713337-12713382)
chr1 (213-258)||(12717428-12717473)
chr1 (216-253)||(31015050-31015087)
chr1 (210-259)||(36905998-36906047)
chr1 (196-253)||(38078676-38078733)
[»] chr8 (30 HSPs)
chr8 (195-259)||(34897071-34897135)
chr8 (195-259)||(4786347-4786411)
chr8 (195-263)||(39954284-39954352)
chr8 (194-268)||(20679395-20679469)
chr8 (195-256)||(14134685-14134746)
chr8 (194-259)||(24362211-24362276)
chr8 (216-268)||(12606829-12606881)
chr8 (209-256)||(7658463-7658510)
chr8 (189-256)||(12570746-12570813)
chr8 (189-259)||(12570517-12570587)
chr8 (209-258)||(4611534-4611583)
chr8 (182-255)||(15816142-15816215)
chr8 (196-256)||(13203628-13203688)
chr8 (195-259)||(13844605-13844669)
chr8 (195-259)||(18964163-18964227)
chr8 (195-259)||(36934656-36934720)
chr8 (216-255)||(3025558-3025597)
chr8 (195-242)||(11815815-11815862)
chr8 (216-259)||(14731719-14731762)
chr8 (194-253)||(24669418-24669477)
chr8 (216-259)||(31236586-31236629)
chr8 (217-259)||(11803267-11803309)
chr8 (217-259)||(11927095-11927137)
chr8 (216-258)||(12559116-12559158)
chr8 (195-253)||(36450769-36450827)
chr8 (203-256)||(14634153-14634206)
chr8 (209-254)||(24017452-24017497)
chr8 (222-259)||(26418351-26418388)
chr8 (201-250)||(29447128-29447177)
chr8 (201-258)||(34201056-34201113)
[»] chr7 (39 HSPs)
chr7 (195-259)||(22868028-22868092)
chr7 (194-259)||(3520351-3520416)
chr7 (194-259)||(6630921-6630986)
chr7 (195-259)||(32308106-32308170)
chr7 (195-259)||(42720899-42720963)
chr7 (193-268)||(5835231-5835306)
chr7 (194-256)||(5235971-5236033)
chr7 (201-255)||(21140995-21141049)
chr7 (197-259)||(22602719-22602781)
chr7 (201-259)||(23128670-23128728)
chr7 (195-253)||(27945027-27945085)
chr7 (179-259)||(2948653-2948733)
chr7 (195-259)||(26733290-26733354)
chr7 (180-259)||(9482905-9482984)
chr7 (196-259)||(20549778-20549841)
chr7 (209-259)||(5548676-5548726)
chr7 (202-259)||(2034434-2034491)
chr7 (194-259)||(15902807-15902872)
chr7 (194-267)||(26329383-26329456)
chr7 (209-254)||(29787383-29787428)
chr7 (195-255)||(1401011-1401071)
chr7 (196-259)||(4909138-4909201)
chr7 (208-259)||(7758321-7758372)
chr7 (216-259)||(17851438-17851481)
chr7 (201-256)||(18569069-18569124)
chr7 (195-258)||(23191882-23191945)
chr7 (216-254)||(2424621-2424659)
chr7 (217-259)||(8239059-8239101)
chr7 (227-257)||(10377525-10377555)
chr7 (215-253)||(13300416-13300454)
chr7 (179-254)||(14729667-14729746)
chr7 (217-259)||(16341504-16341546)
chr7 (209-259)||(19206050-19206100)
chr7 (194-268)||(22484010-22484084)
chr7 (191-257)||(41020478-41020544)
chr7 (217-254)||(11890933-11890970)
chr7 (222-259)||(17307906-17307943)
chr7 (194-259)||(25791638-25791702)
chr7 (202-259)||(27732248-27732305)
[»] scaffold0004 (1 HSPs)
scaffold0004 (179-253)||(92777-92851)
[»] chr6 (41 HSPs)
chr6 (196-258)||(13360382-13360444)
chr6 (198-259)||(19040341-19040402)
chr6 (195-259)||(7265602-7265666)
chr6 (195-259)||(13851722-13851786)
chr6 (195-258)||(7723260-7723323)
chr6 (195-257)||(7996389-7996451)
chr6 (195-257)||(8022350-8022412)
chr6 (195-256)||(9658865-9658926)
chr6 (195-268)||(19044450-19044523)
chr6 (195-259)||(9027164-9027228)
chr6 (216-259)||(9025503-9025546)
chr6 (194-259)||(7086780-7086845)
chr6 (210-255)||(8389485-8389530)
chr6 (222-259)||(11591879-11591916)
chr6 (222-259)||(13364714-13364751)
chr6 (222-259)||(26562702-26562739)
chr6 (210-259)||(30866153-30866202)
chr6 (195-255)||(3398605-3398664)
chr6 (195-259)||(5732519-5732583)
chr6 (195-255)||(7938102-7938162)
chr6 (194-266)||(25096408-25096480)
chr6 (200-259)||(9629374-9629433)
chr6 (194-253)||(16833293-16833352)
chr6 (216-259)||(21924944-21924987)
chr6 (216-259)||(24832595-24832638)
chr6 (198-253)||(25038086-25038141)
chr6 (208-255)||(32511679-32511726)
chr6 (196-259)||(1532225-1532290)
chr6 (209-259)||(7377979-7378029)
chr6 (195-253)||(8776988-8777046)
chr6 (217-259)||(9617442-9617484)
chr6 (195-253)||(10770689-10770747)
chr6 (195-253)||(16766683-16766741)
chr6 (197-255)||(17341677-17341735)
chr6 (217-259)||(21142126-21142168)
chr6 (195-253)||(34595120-34595178)
chr6 (210-259)||(7151413-7151462)
chr6 (222-259)||(17411877-17411914)
chr6 (194-259)||(20518330-20518395)
chr6 (217-254)||(31579239-31579276)
chr6 (216-257)||(34073358-34073399)
[»] scaffold0022 (1 HSPs)
scaffold0022 (210-256)||(90844-90890)
[»] scaffold0085 (1 HSPs)
scaffold0085 (194-259)||(26378-26443)
[»] scaffold0123 (1 HSPs)
scaffold0123 (208-259)||(44534-44585)
[»] scaffold0306 (1 HSPs)
scaffold0306 (195-253)||(13386-13444)
[»] scaffold0152 (1 HSPs)
scaffold0152 (195-253)||(21883-21941)
[»] scaffold0036 (1 HSPs)
scaffold0036 (213-259)||(9756-9802)
[»] scaffold0361 (1 HSPs)
scaffold0361 (179-253)||(14499-14574)
[»] scaffold0020 (1 HSPs)
scaffold0020 (216-259)||(135321-135364)
[»] scaffold0018 (1 HSPs)
scaffold0018 (195-253)||(178833-178892)
[»] scaffold0103 (1 HSPs)
scaffold0103 (195-253)||(51797-51855)
[»] scaffold0227 (1 HSPs)
scaffold0227 (179-255)||(7324-7401)
[»] scaffold0044 (1 HSPs)
scaffold0044 (222-255)||(53193-53226)
[»] scaffold0011 (1 HSPs)
scaffold0011 (195-268)||(240021-240094)


Alignment Details
Target: chr3 (Bit Score: 666; Significance: 0; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 666; E-Value: 0
Query Start/End: Original strand, 18 - 763
Target Start/End: Complemental strand, 29112530 - 29111775
Alignment:
Q  18 aaagacaaattgggaagctacaaagattgatcatattaatgtatcaagtcttctctaatgtaaattctttgtatttacataagatatcatcaattctttc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29112530 aaagacaaattgggaagctacaaagattgatcatattaatgtatcaagtcttctctaatgtaaattctttgtatttacataagatatcatcaattctttc 29112431  T
Q  118 atgatgggggttgatgtaaagtactaaaggtagtatcatattaagccatgactcagtcaccatgaagcacggatatagacactgacacgttgacaccact 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  29112430 atgatgggggttgatgtaaagtactaaaggtagtatcatattaagccatgactcagtcaccatgaagcacggatacggacactgacacgttgacaccact 29112331  T
Q  218 aattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtcactatataaaaggcaaccttagcaataattnnnnnnnnn----------c 307  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||                   |    
T  29112330 aattatttgagaaaatcatataattcagtgtaattatatatgacggcgtcactatataaaaggcaaccttagcaataattaaaaaaaaaaaaaaaaaaac 29112231  T
Q  308 taagttgtttgtaaagtacctggagaagaaggtagctctggccatcaacagcattcttaatgactttgaaggtctgaccatagtaaatatgaaaattgac 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  29112230 taagttgtttgtaaagtacctggagaagaaggtagctctggccatcaacagcattcttaatgactttgaaggtctgaccatagtaaatatgaaaatttac 29112131  T
Q  408 agcatcttcaacctttgaaaagtttcccactttcactgtagtactaactccatcaacacttccacaactaaagaaccaaactaatgctaagaaaaataaa 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||     
T  29112130 agcatcttcaacctttgaaaagtttcccactttcactgtagtactaactccatcaacacttccacaattaaagaaccaaactaatgctaagaaaaataat 29112031  T
Q  508 gcttggaaccaagagcaatgagctgaatccataagctgaatgagttagttaccactttctatataaaaaataaatatgtgatcaatgaagctaattatat 607  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29112030 gcttggaaccaagagcaatgagctgaatccataagctgaatgagttagttaccactttctatataaaaaataaatatgtgatcaatgaagctaattatat 29111931  T
Q  608 acactatgtttgttcatgctaattattttaaggcatattaaaaagctatttaactttttgagcaattatctgcattctttgtggtgcagtgtgcagcttt 707  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29111930 acactatgtttgttcatgctaattattttaaggcacattaaaaagctatttaactttttgagcaattatctgcattctttgtggtgcagtgtgcagcttt 29111831  T
Q  708 ttcctgataaatggattgaaactaaggtgaaatcataaggagtgtatgaatatatt 763  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29111830 ttcctgataaatggattgaaactaaggtgaaatcataaggagtgtatgaatatatt 29111775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 309 - 763
Target Start/End: Original strand, 33313537 - 33313978
Alignment:
Q  309 aagttgtttgtaaagtacctggagaagaaggtagctctggccatcaacagcattcttaatgactttgaaggtctgaccatagtaaatatgaaaattgaca 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||    
T  33313537 aagttgtttgtaaagtacctggagaagaaggtagctctggccatcaacagcattcttaatgactctgaaggtctgaccatagtaaatatgaaaattcaca 33313636  T
Q  409 gcatcttcaacctttgaaaagtttcccactttcactgtagtactaactccatcaacacttccacaactaaagaaccaaactaatgctaagaaaaataaag 508  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  33313637 gcatcttctacctttgaaaagtttcccactttcactgtagtactcactccatgaacacttccacaattaaagaaccaaactaatgctaagaaaaataaag 33313736  T
Q  509 cttggaaccaagagcaatgagctgaatccataagctgaatgagttagttaccactttctatataaaaaataaatatgtgatcaatgaagctaattatata 608  Q
    |||||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  33313737 cttggaaccaagagcaatg-------------agctgaatgagttagttaccactttctatataaaaaataaatatgtgatcattgaagctgattatata 33313823  T
Q  609 cactatgtttgttcatgctaattattttaaggcatattaaaaagctatttaactttttgagcaattatctgcattctttgtggtgcagtgtgcagctttt 708  Q
    |||||||||||||||| |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33313824 cactatgtttgttcattcggattattttaaggcacattaaaaagctatttaactttttgagcaattatctgcattctttgtggtgcagtgtgcagctttt 33313923  T
Q  709 tcctgataaatggattgaaactaaggtgaaatcataaggagtgtatgaatatatt 763  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33313924 tcctgataaatggattgaaactaaggtgaaatcataaggagtgtatgaatatatt 33313978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 33313290 - 33313469
Alignment:
Q  18 aaagacaaattgggaagctacaaagattgatcatattaatgtatcaagtcttctctaatgtaaattctttgtatttacataagatatcatcaattctttc 117  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33313290 aaagacaaattgggaagctacaaagattgatcatactaatgtatcaagtcttctctaatgtaaattctttgtatttacataagatatcatcaattctttc 33313389  T
Q  118 atgatgggggttgatgtaaagtactaaaggtagtatcatattaagccatgactcagtcaccatgaagcacggatatagacactgacac 205  Q
    || |  |||||||||||||||   |||||||||||||||||||||||||||||| ||    ||||||||||||||| ||||| |||||    
T  33313390 atca-cggggttgatgtaaag---taaaggtagtatcatattaagccatgactccgt----atgaagcacggatatggacacggacac 33313469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 23870648 - 23870572
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||||||  ||||| ||||||| |||||| ||||| |||||| |||||||||||||||||||| ||||||    
T  23870648 atgaagcacggatacggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattcagtgtgattata 23870572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 11493434 - 11493372
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||| |||||||| |||||||||||| || ||||||||||| |||||||||||||||||||||    
T  11493434 gacattgacacgtcgacaccactaataatgtgagaaaatcacataattcagtgtaattatatg 11493372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 8383243 - 8383303
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||| |||||||  |||||| ||||| ||||||||||||||||||||||||||||||||||    
T  8383243 gacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattata 8383303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 29508447 - 29508494
Alignment:
Q  212 accactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||    
T  29508447 accactaataatttgaaaaaatcatataattcagtgtaattatatgtg 29508494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 8039893 - 8039844
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  8039893 acaccgctaataatttgagaaaattatataattcagtgtaattatatgtg 8039844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 12704007 - 12704056
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||||||||| ||||||||||| || ||||||||||||||||||||||    
T  12704007 gacaccactaataatttgagaaaagcacataattcagtgtaattatatgt 12704056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 17005677 - 17005632
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||    
T  17005677 acaccactaataatttgataaaatcatataattcagtgtaattata 17005632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 15544679 - 15544743
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||||||||| ||||| |||||| ||||||| ||||||| || ||||||| ||||    
T  15544679 gacactgacacgttgacaccgctaataatttgataaaatcacataattctgtataattatgtgtg 15544743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 2620126 - 2620071
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 250  Q
    ||||||||||||  |||||||||||| |||||||||||||| |||||| |||||||    
T  2620126 gacactgacacgccgacaccactaatcatttgagaaaatcacataattaagtgtaa 2620071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 7928450 - 7928500
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||| |||||| ||||||| |||||||||||||||||||||||    
T  7928450 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtg 7928500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 14216878 - 14216936
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||| ||||| |||||| |||| | || ||||||||||||||||||||||    
T  14216878 gacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaatta 14216936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 14223007 - 14223065
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||| ||||| |||||| |||| | || ||||||||||||||||||||||    
T  14223007 gacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaatta 14223065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 256
Target Start/End: Original strand, 18426919 - 18426996
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||||||| ||||  ||||| ||||||  |||||||||||| |||| | ||||||| ||||||| ||||||||||||    
T  18426919 atgaagcacagatacggacacggacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaattatat 18426996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 26290356 - 26290421
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  ||||||| |||| |||||||||||||| ||| ||| || ||||||||||||    
T  26290356 agacactgacacgccgacaccattaataatttgagaaaatcacatagttcggtttaattatatgtg 26290421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 34307846 - 34307793
Alignment:
Q  202 acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||| ||||||| ||||| |||||||||||||| ||| |||||||||||||||    
T  34307846 acacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattata 34307793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 26508090 - 26508154
Alignment:
Q  189 gatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||| ||| ||||||||| ||||||  ||||| |||||| ||||||| |||||||||||||||||    
T  26508090 gatacagatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 26508154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 49505227 - 49505163
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||  || ||| ||||| |||||||||||||| |||||| ||||||||||||||||    
T  49505227 gacaccgacacgcagagaccgctaataatttgagaaaatcacataatttagtgtaattatatgtg 49505163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 256
Target Start/End: Complemental strand, 10690321 - 10690274
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||| ||||| || ||||||||||| ||||||||||||||||||||    
T  10690321 gacaccgctaataatctgagaaaatcacataattcagtgtaattatat 10690274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 10954939 - 10954994
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaat 251  Q
    |||||||||||  ||||| |||||| |||||| ||||||| |||||||||||||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaat 10954994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 11313852 - 11313809
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  11313852 ctaataatttgagaaaatcacataatttagtgtaattatatgtg 11313809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 11251985 - 11252023
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattat 254  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  11251985 ctaataatttgagaaaatcacataattcagtgtaattat 11252023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 14618769 - 14618831
Alignment:
Q  197 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||| ||||||| ||||| |||| |||||| || ||||||||||||||| |||||||    
T  14618769 cactgagacgctgacacccctaataatttaagaaaaccacataattcagtgtaataatatgtg 14618831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 16192801 - 16192759
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||| | |||||||||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtg 16192759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 22774144 - 22774070
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    |||||| ||||||| |||||||||||| ||| || ||| ||| ||| ||||||||||||||| ||| ||| ||||    
T  22774144 agacacagacacgtcgacaccactaataattagacaaagtcacatatttcagtgtaattataagtgtcggtgtca 22774070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 25093510 - 25093552
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  25093510 taatgatttgagaaaatcacacaattcagtgtaattatatgtg 25093552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 32804591 - 32804549
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||| |||||| ||||||||||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaattatatgtg 32804549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 48353787 - 48353741
Alignment:
Q  212 accactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||||    
T  48353787 accactaataatttgagaaaatcaaataattaattgtaattatatgt 48353741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 4987363 - 4987306
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 4987306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 8789596 - 8789559
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  8789596 atttgagaaaatcacataattccgtgtaattatatgtg 8789559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 9624648 - 9624689
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    ||||| |||||||||||||| |||||||| ||||||||||||    
T  9624648 ctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 14840349 - 14840304
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||| |||| |||| ||||||||| |||||||||||||||||||    
T  14840349 acaccattaataatttcagaaaatcacataattcagtgtaattata 14840304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 24633766 - 24633811
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||||||||||| |||||||||||||| ||||||| ||| ||||||    
T  24633766 gacaccactaataatttgagaaaatcacataattcggtgcaattat 24633811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 1e-18; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 39205850 - 39205930
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||| ||||||| |||||  ||||| |||||||||||||||||||||  |||||||||||||||    
T  39205850 atgaagcacggatacagacacggacacgtcgacactgctaataatttgagaaaatcatataattaggtgtaattatatgtg 39205930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 39698511 - 39698585
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||  |||||||||||| ||||||  ||||| |||||| ||||||| |||||||||||||||||    
T  39698511 atgaagcacggatacggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaatta 39698585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 27144448 - 27144513
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  |||||| ||||| ||||||| |||||| |||||| ||||||||||||||||    
T  27144448 agacactgacacgccgacaccgctaataatttgaggaaatcacataatttagtgtaattatatgtg 27144513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 3966489 - 3966553
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||| |  |||||| ||||| |||||||||||||| | |||||||||||||||||||||    
T  3966489 gacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtg 3966553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 6471941 - 6471898
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaattatatgtg 6471898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 32630803 - 32630744
Alignment:
Q  200 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||| |||||||  |||| |||||||||||| |||||||||| ||||||||||||||    
T  32630803 tgacacgctgacaccgataataatttgagaaaattatataattcaatgtaattatatgtg 32630744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 41091309 - 41091266
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  41091309 ctaatgatttgagaaaatcacataattcagtgtaattatatgtg 41091266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 6035468 - 6035529
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||||||||||  |||||| ||||| |||||||||| | ||||||||||||||||||||||    
T  6035468 agacactgacacgccgacaccgctaataatttgagaaa-taatataattcagtgtaattatat 6035529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 12264887 - 12264838
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||||||| | || ||||||||||||||||||||    
T  12264887 acaccgctaattatttgagaaaattacatgattcagtgtaattatatgtg 12264838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Complemental strand, 18421887 - 18421842
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 267  Q
    |||||||||||||| ||||| ||||||||||||||||| |||||||    
T  18421887 atttgagaaaatcacataatccagtgtaattatatgtgtcggcgtc 18421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 24273076 - 24273039
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24273076 atttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 24389138 - 24389175
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||||||||||||||||||||    
T  24389138 atttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 30502446 - 30502397
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  30502446 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30502397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 30542789 - 30542740
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  30542789 acaccgctaataatttgagaaaatcacttaattcagtgtaattatatgtg 30542740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 34879363 - 34879400
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||||||||||||||||||| |||||||    
T  34879363 atttgagaaaatcatataattcagtgtaataatatgtg 34879400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 35017040 - 35017085
Alignment:
Q  212 accactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  35017040 accactaataatttgagaaaatcacataatttagtgtaattatatg 35017085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 12927661 - 12927701
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  12927661 ctaataatttgagaaaatcatataatttagtgtaattatat 12927701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 15410521 - 15410457
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||| ||||| |||| ||||||| |||| |||||||||||| |||||||    
T  15410521 gacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtg 15410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 5468054 - 5467991
Alignment:
Q  192 atagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||||||||  | |||  |||| |||||| ||||||| |||||||||||||||||||    
T  5468054 atagacactgacacgtcaataccgataataatttgataaaatcacataattcagtgtaattata 5467991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 6770529 - 6770588
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||||||||||  |||||| |||||| |||| ||||||||| ||||||||||||| ||||    
T  6770529 gacactgacacactgacacaactaataatttaagaaaatcacataattcagtgtacttat 6770588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 23012460 - 23012417
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||||||||||||||||| | ||||||||||||||    
T  23012460 ctaataatttgagaaaatcatataatttaatgtaattatatgtg 23012417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 28588742 - 28588687
Alignment:
Q  200 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||  ||||||  |||| |||||||||||||| |||||||||||||||||||    
T  28588742 tgacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattata 28588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 33035857 - 33035810
Alignment:
Q  212 accactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||| ||||||  ||||||||||||||||||||||||||||||    
T  33035857 accattaataatttgaataaatcatataattcagtgtaattatatgtg 33035810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 10022645 - 10022679
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||| ||||||||||||||||||||||||||||    
T  10022645 atttgataaaatcatataattcagtgtaattatat 10022679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 198 - 256
Target Start/End: Complemental strand, 22423882 - 22423824
Alignment:
Q  198 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||||||  |||||| |||||| |||||||||||||| |||||||| | |||||||||    
T  22423882 actgacaccctgacactactaataatttgagaaaatcacataattcaatataattatat 22423824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 23016040 - 23016002
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||| |||||||||||||| |||||||||||||||||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattata 23016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 25863212 - 25863250
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  25863212 taataatttgagaaaatgatataattcagtgtaattata 25863250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 224 - 258
Target Start/End: Original strand, 31682048 - 31682082
Alignment:
Q  224 ttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||||||||||||| |||||||||||||||    
T  31682048 ttgagaaaatcatataatttagtgtaattatatgt 31682082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 42893330 - 42893404
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||| ||||| |||||   |||||  ||||| |||||| ||||||| ||||| |||||||||||    
T  42893330 atgaagcacggatatggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaatta 42893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 6247609 - 6247666
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaatta 6247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 15405115 - 15405070
Alignment:
Q  208 tgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||| |||||| |||||| |||||||||||||||| ||||||||    
T  15405115 tgacacaactaataatttgaaaaaatcatataattcaatgtaatta 15405070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 17593783 - 17593734
Alignment:
Q  207 ttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||| ||| ||||| ||||||||||||||  |||||||||||||||||||    
T  17593783 ttgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattatat 17593734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 19438329 - 19438386
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatt 252  Q
    ||||||||||| | |||| | || || |||||||||||||| ||||||||||||||||    
T  19438329 gacactgacacatcgacatcgctgataatttgagaaaatcacataattcagtgtaatt 19438386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 36838544 - 36838593
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| |||||||||||| | |||||| ||||||||||||||||    
T  36838544 acaccgctaataatttgagaaaattacataatttagtgtaattatatgtg 36838593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 1e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 56488599 - 56488519
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||| ||||| ||||| |||||||||||||| ||||  |||||||||||||||||||||||| ||||| |||||||    
T  56488599 atgaagcacagatatggacaccgacacgttgacaccgctaacaatttgagaaaatcatataattcagggtaatcatatgtg 56488519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 36635310 - 36635374
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||   ||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  36635310 gacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtg 36635374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 40179709 - 40179647
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    ||||||||||||||||||||| ||||  ||||| ||||||| |||||||||||||||||||||    
T  40179709 gacactgacacgttgacaccattaatagtttgaaaaaatcacataattcagtgtaattatatg 40179647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 22440673 - 22440606
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacg 262  Q
    |||||||| || | ||||||  |||| |||||||||||||| ||||||||||||||||||||||||||    
T  22440673 gacactgatacatcgacaccgttaataatttgagaaaatcacataattcagtgtaattatatgtgacg 22440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 4383338 - 4383411
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||  ||||||||||||| || || |||||| |||||| ||||||| |||||||||||||||||    
T  4383338 atgaagcacggatacggacactgacacgtcgatacaactaataatttga-aaaatcacataattcagtgtaatta 4383411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 13783267 - 13783331
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||   |||||| ||||||||||||||| |||| | |||||||||||||||||||||    
T  13783267 gacactgacacaccgacaccgctaattatttgagaagatcacaaaattcagtgtaattatatgtg 13783331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 256
Target Start/End: Complemental strand, 21539943 - 21539879
Alignment:
Q  192 atagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||||||||||| |  ||||||| |||| |||| |||||||||||||||| |||||||||||||    
T  21539943 atagacactgacatgccgacaccattaataatttaagaaaatcatataatttagtgtaattatat 21539879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 5775417 - 5775358
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    ||||||| |||| |||||||||||||| |||||| |||||||||||||||| ||| ||||    
T  5775417 gacaccattaataatttgagaaaatcacataattaagtgtaattatatgtgtcggtgtca 5775358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 223 - 258
Target Start/End: Complemental strand, 8402787 - 8402752
Alignment:
Q  223 tttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||||||||||||||||||||||||||||||    
T  8402787 tttgagaaaatcatataattcagtgtaattatatgt 8402752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 40613441 - 40613500
Alignment:
Q  200 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||  |||||| |||||  ||||||||||||| |||||||||||||||||||||||    
T  40613441 tgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaattatatgtg 40613500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 3712568 - 3712518
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||| ||||||||||||||| ||||||| ||||||||||||||    
T  3712568 gacaccgctaataatttgagaaaatcatgtaattcaatgtaattatatgtg 3712518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 8423777 - 8423731
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||| ||||| |||||||||||||| |||||||||||||||||||    
T  8423777 gacaccgctaataatttgagaaaatcacataattcagtgtaattata 8423731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 210 - 256
Target Start/End: Complemental strand, 30522973 - 30522927
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||| |||||||||||||||||||| |||||||||||||| |||||    
T  30522973 acaccgctaattatttgagaaaatcacataattcagtgtaactatat 30522927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 40742591 - 40742641
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||| |||| ||||||||||||||||||||  ||||||||||||||||    
T  40742591 gacaccattaataatttgagaaaatcatataatctagtgtaattatatgtg 40742641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 56257940 - 56257978
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattat 254  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  56257940 ctaataatttgagaaaatcatataattcagtgtaattat 56257978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 903930 - 903971
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||| |||||||||||||| ||||||||||||||||||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 258
Target Start/End: Original strand, 7970535 - 7970568
Alignment:
Q  225 tgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||||||||||||||||||||||||||||    
T  7970535 tgagaaaatcatataattcagtgtaattatatgt 7970568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 35723458 - 35723393
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaat-catataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||| ||||| |||||||||||| || |||||||| ||||||||||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtg 35723393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 15029751 - 15029815
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||  ||||| |||||| || |||| |||||||||||||||||||||||    
T  15029751 gacactgacacgcagacactgctaataatttgaaaatatcacataattcagtgtaattatatgtg 15029815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 251
Target Start/End: Original strand, 37496690 - 37496746
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaat 251  Q
    ||||||||||||||||||||  ||||| ||||||||||| | |||||||| ||||||    
T  37496690 gacactgacacgttgacaccgataattttttgagaaaatgacataattcaatgtaat 37496746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 37698719 - 37698759
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  37698719 ctaataatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 999400 - 999357
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||| ||||||||||||| ||||||||||||||||    
T  999400 ctaataatttgagtaaatcatataatttagtgtaattatatgtg 999357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Complemental strand, 7214580 - 7214533
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    ||||||||||| |||||||||||||| |||||| | ||||||||||||    
T  7214580 acaccactaataatttgagaaaatcacataatttaatgtaattatatg 7214533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 54580083 - 54580036
Alignment:
Q  208 tgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||| |||||| |||||| ||||||| |||||||||||||||||||    
T  54580083 tgacacaactaataatttgaaaaaatcacataattcagtgtaattata 54580036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 35952669 - 35952627
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||| |||||| |||||||||||||||| |||||||||||||    
T  35952669 ctaataatttgataaaatcatataattcaatgtaattatatgt 35952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 200 - 258
Target Start/End: Complemental strand, 49653040 - 49652982
Alignment:
Q  200 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||| | || |||||| |||| ||||||||| |||||||||| |||||||||||    
T  49653040 tgacacgtttatactactaataatttaagaaaatcagataattcagtataattatatgt 49652982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 16189722 - 16189759
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  16189722 atttgagaaaatcacataattcagtgtaattatgtgtg 16189759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 18576083 - 18576046
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  18576083 atttgagaaaatcacataattcggtgtaattatatgtg 18576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 259
Target Start/End: Complemental strand, 22234980 - 22234899
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaa-tcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||||  ||||| ||||||  |||||| ||||  |||||| |||| ||| |||||||||||||||| ||||||    
T  22234980 atgaagcacggatacggacacggacacgccgacaccgctaaaaatttgaaaaaaatcacataattcagtgtaattctatgtg 22234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 24613768 - 24613719
Alignment:
Q  201 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 250  Q
    ||||||| ||||| |||||| |||||||||||||| |||||||| |||||    
T  24613768 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaa 24613719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 12941008 - 12940950
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  12941008 gacactgacacgttgacacaactaataatttgaaaaaatcatataattcagtgtaatta 12940950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 20242800 - 20242736
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  ||||| ||||||| ||| ||||||||| |||||||||||||||||||||||    
T  20242800 gacactgacacgccgacacaactaatttttttagaaaatcacataattcagtgtaattatatgtg 20242736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 21616748 - 21616812
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  21616748 gacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 21616812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 23718012 - 23718076
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||   |||||| ||||| |||||||||| ||| |||||||||||||||||||||||    
T  23718012 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 23718076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 24105684 - 24105748
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||   |||||| ||||| |||||||||| ||| |||||||||||||||||||||||    
T  24105684 gacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtg 24105748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 29970622 - 29970558
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||| |||||||| ||||| |||||||||||||  ||| ||||||||||| |||||||    
T  29970622 gacactgacacattgacaccgctaataatttgagaaaatcgcatagttcagtgtaatcatatgtg 29970558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 4882766 - 4882711
Alignment:
Q  198 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||| || ||| |||||||||||| ||||| |||||||||||||||||||    
T  4882766 actgacacgtcgataccgctaattatttgaaaaaatgatataattcagtgtaatta 4882711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 34691857 - 34691814
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  34691857 ctaataatttgataaaatcatataattcagtgtaattatatgtg 34691814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 34714269 - 34714226
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  34714269 ctaataatttgataaaatcatataattcagtgtaattatatgtg 34714226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 44860319 - 44860370
Alignment:
Q  208 tgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||| ||||| |||||||||||||  |||||||||||||||||||||||    
T  44860319 tgacaccgctaataatttgagaaaatcgcataattcagtgtaattatatgtg 44860370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 261
Target Start/End: Complemental strand, 16069327 - 16069261
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgac 261  Q
    ||||||||||||  ||||||  |||| |||| | |||||||||||||||||||||||||| ||||||    
T  16069327 gacactgacacgccgacaccgttaataatttaaaaaaatcatataattcagtgtaattatttgtgac 16069261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 20539747 - 20539689
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||| |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  20539747 gacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaatta 20539689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 196 - 254
Target Start/End: Complemental strand, 21782890 - 21782832
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||||||||||  |||||  ||||| |||||||||||||| ||||||||||||||||||    
T  21782890 acactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaattat 21782832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 30527646 - 30527604
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaattatatgtg 30527604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 37411303 - 37411253
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||| |||||||||||||| |||||||||||| ||||||||||    
T  37411303 gacaccgctaataatttgagaaaatcacataattcagtgtgattatatgtg 37411253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 2665946 - 2665897
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  2665946 acaccactaataattttagaaaatcacataatttagtgtaattatatgtg 2665897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 5367197 - 5367242
Alignment:
Q  214 cactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  5367197 cactaataatttgaggaaatcacataattcagtgtaattatatgtg 5367242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 28677909 - 28677958
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||| ||||| |||||| ||||||| ||||||||||||||||||||||    
T  28677909 gacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgt 28677958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 36756418 - 36756357
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||||||||| ||||| |||||| ||||||  |||| | |||||||||||||||||||    
T  36756418 agacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattata 36756357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 24975384 - 24975336
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||||| ||||| ||||||||||||| ||||||||||||||| ||||||    
T  24975384 gacaccgctaataatttgagaaaatcgtataattcagtgtaaatatatg 24975336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 25846743 - 25846787
Alignment:
Q  211 caccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||||| |||||||||||||| || ||||||||||||||||    
T  25846743 caccactaataatttgagaaaatcacatgattcagtgtaattata 25846787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 31808063 - 31808127
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||   |||||| ||||| |||| | ||||||| |||||||||||||||||||||||    
T  31808063 gacactgacacaccgacaccgctaataatttaacaaaatcacataattcagtgtaattatatgtg 31808127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 34785055 - 34784991
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||   ||||| ||||||| ||| ||||||||| |||||| ||||||||||||||||    
T  34785055 gacactgacacaccgacacaactaatttttttagaaaatcacataatttagtgtaattatatgtg 34784991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 38355935 - 38355887
Alignment:
Q  220 ttatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    |||||||||||||||| |||||||||||| |||||||||| ||| ||||    
T  38355935 ttatttgagaaaatcacataattcagtgtgattatatgtgtcggtgtca 38355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 243
Target Start/End: Original strand, 11670738 - 11670789
Alignment:
Q  192 atagacactgacacgttgacaccactaattatttgagaaaatcatataattc 243  Q
    |||||||||||||||| ||| |||||||| |||||| ||||||| |||||||    
T  11670738 atagacactgacacgtcgacgccactaataatttgaaaaaatcacataattc 11670789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 268
Target Start/End: Original strand, 18276521 - 18276580
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    |||||| ||||| ||||||||||||||  ||||||||||||||||| |||| ||| ||||    
T  18276521 gacaccgctaataatttgagaaaatcacttaattcagtgtaattatgtgtgtcggtgtca 18276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 252
Target Start/End: Complemental strand, 22084883 - 22084848
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaatt 252  Q
    |||| |||||||||||||||||||||||||||||||    
T  22084883 taataatttgagaaaatcatataattcagtgtaatt 22084848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 35056883 - 35056918
Alignment:
Q  224 ttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||| ||||||||||||||||||||||||||    
T  35056883 ttgagaaaaccatataattcagtgtaattatatgtg 35056918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 223 - 261
Target Start/End: Complemental strand, 15909677 - 15909639
Alignment:
Q  223 tttgagaaaatcatataattcagtgtaattatatgtgac 261  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtgac 15909639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 18841086 - 18841028
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||| |||||| |||||| |||||| ||||| | |||||| ||||||||||    
T  18841086 gacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaatta 18841028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 27084232 - 27084302
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgta 249  Q
    ||||||||||||||  ||||| |||||   |||||  ||||| ||||||||||||||||||||||| ||||    
T  27084232 atgaagcacggatacggacacggacactccgacactgctaataatttgagaaaatcatataattcaatgta 27084302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 35449521 - 35449563
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||| | |||||||||||||||||||||    
T  35449521 taataatttgagaaaatcacagaattcagtgtaattatatgtg 35449563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 39279691 - 39279725
Alignment:
Q  225 tgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||| |||||||||||||||||||||||    
T  39279691 tgagaaaatcaaataattcagtgtaattatatgtg 39279725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 39323250 - 39323308
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||| |||| |||||| ||||| |||||| ||||| | |||||||||||||||||    
T  39323250 gacactgaaacgtcgacaccgctaataatttgacaaaattacataattcagtgtaatta 39323308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 1327978 - 1328023
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||||| ||||| |||||||||||||||| |||||||| |||||||    
T  1327978 gacaccgctaataatttgagaaaatcataaaattcagtataattat 1328023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 2e-17; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 36878437 - 36878507
Alignment:
Q  185 cacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||| |||||||||||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||    
T  36878437 cacggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattata 36878507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 7918285 - 7918220
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||| |||||||||||||||||||||||    
T  7918285 agacaatgacacgctgacatcactaataatttgagaaaatcacataattcagtgtaattatatgtg 7918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 10572661 - 10572598
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||  |||||||||||| |||||||||||||| ||||||| ||||||||| |||||    
T  10572661 acactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaattaaatgtg 10572598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 1815227 - 1815301
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||  ||||||||||||  ||||| | ||||||||| | ||||||| |||||||||||||||||    
T  1815227 atgaagcacggatacggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaatta 1815301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 25361886 - 25361936
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||| || |||||||||||||| |||||||||||||||||||||||    
T  25361886 gacaccactgataatttgagaaaatcacataattcagtgtaattatatgtg 25361936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 28273161 - 28273103
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||| | |||||| |||||| |||||| |||||||||||||||||||||||||    
T  28273161 gacactgacatgctgacacaactaatcatttgaaaaaatcatataattcagtgtaatta 28273103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 34298436 - 34298482
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||    
T  34298436 gacaccactaataatttgagaaaatcacataattcagtgtaattata 34298482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 38503320 - 38503370
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  38503320 gacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtg 38503370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 10233254 - 10233303
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  10233254 acaccactaataaattgagaaaatcacataattcagtgtaattatatgtg 10233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 13997868 - 13997933
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  ||||||  ||||||||| | ||||||| |||||||||||||||||||||||    
T  13997868 agacactgacacgccgacaccgttaattatttaaaaaaatcacataattcagtgtaattatatgtg 13997933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 398838 - 398778
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||||  |||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  398838 gacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattata 398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 6427336 - 6427400
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||   ||||| ||||| |||||||||||||| |||||||| ||||||||||||||    
T  6427336 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 6427400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 14332700 - 14332652
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  14332700 acaccactaataatttgagaaaatcacataatttagtgtaattatatgt 14332652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 17831604 - 17831540
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||| ||||| |||||||||||||| || |||||||||||| |||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtg 17831540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 190 - 256
Target Start/End: Complemental strand, 48148116 - 48148049
Alignment:
Q  190 atatagacactgacacgttgacaccactaattatttgagaaaa-tcatataattcagtgtaattatat 256  Q
    ||||||| ||||||| ||||||||| ||||| |||| | |||| ||||||||||||||||||||||||    
T  48148116 atatagatactgacatgttgacaccgctaataattttaaaaaaatcatataattcagtgtaattatat 48148049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 1864931 - 1864889
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||| |||||||||||||||||||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaattatatgtg 1864889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 2896194 - 2896140
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgta 249  Q
    ||||||||||||  |||||| ||||| |||||||||||||| |||||||||||||    
T  2896194 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgta 2896140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 9828044 - 9828094
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||| |||||| ||||||| |||||||||||||||| ||||||    
T  9828044 gacaccactaataatttgataaaatcacataattcagtgtaattttatgtg 9828094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 12443512 - 12443466
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtgacg 262  Q
    ||||| |||||||||||||| |||||||||||||||| |||||||||    
T  12443512 ctaataatttgagaaaatcacataattcagtgtaattgtatgtgacg 12443466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 256
Target Start/End: Complemental strand, 16927259 - 16927197
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||||||||||| | ||   ||||| |||||| ||||||||||||||||||||||||||||    
T  16927259 agacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattatat 16927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 19324550 - 19324612
Alignment:
Q  197 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| |||| |||||  || || |||||||||||||| |||||||||||||||||||||||    
T  19324550 cactgatacgtcgacactgctgataatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 20157421 - 20157359
Alignment:
Q  197 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||| | |||||| ||||| || ||||||||||| ||||||||||||||| |||||||    
T  20157421 cactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtg 20157359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 24577259 - 24577201
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||| |||||| |||||| |||||| |||||| ||||||| |||||||||||||||||    
T  24577259 gacacggacacgctgacacaactaataatttgaaaaaatcacataattcagtgtaatta 24577201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 25098614 - 25098564
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| || || |||||||||||||| |||||||||||||||||||||||    
T  25098614 gacaccgctgataatttgagaaaatcacataattcagtgtaattatatgtg 25098564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 40181878 - 40181920
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 1486779 - 1486722
Alignment:
Q  198 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||| ||||||  ||||| |||||| ||||||| |||||||||||||||||||    
T  1486779 actgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattata 1486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 6415074 - 6415001
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    ||||||||||||  |||| | |||||||||||||||||||| ||||| |||| |||||| ||||| ||| ||||    
T  6415074 gacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgtcggtgtca 6415001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 44482243 - 44482280
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||||||||||||||||||||    
T  44482243 atttgagaaaatcacataattcagtgtaattatatgtg 44482280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 8842788 - 8842724
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||||||||||  | |||||||| | ||||||||||| ||||||||| | |||||||||||||    
T  8842788 agacactgacacgccggcaccactagtaatttgagaaaaacatataatttaatgtaattatatgt 8842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 9033081 - 9033021
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaa-tcatataattcagtgtaattat 254  Q
    |||||||||||||  ||||||||||| |||||| |||| ||| ||||||||||||||||||    
T  9033081 gacactgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaattat 9033021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 9629973 - 9629913
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||| ||||| | |||||| ||||| |||||| |||||||||||||||||||| ||||||    
T  9629973 gacaccgacacatcgacaccgctaataatttgataaaatcatataattcagtgtgattata 9629913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 5898340 - 5898277
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    ||||||||| |||  |||||| ||||| || ||| ||||||| |||||||||||||||||||||    
T  5898340 agacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg 5898277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 19562693 - 19562630
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||  |||||  ||||| |||||||||||||  ||| |||||||||||||||||||    
T  19562693 acactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtg 19562630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 259
Target Start/End: Original strand, 34371728 - 34371763
Alignment:
Q  224 ttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||| |||||||||||||||||||||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtg 34371763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Complemental strand, 39130835 - 39130776
Alignment:
Q  200 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||| |||||| | |||| |||| ||||||| |||||||| ||||||||||||||||    
T  39130835 tgacacgctgacactattaataattttagaaaattatataatttagtgtaattatatgtg 39130776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 49872844 - 49872887
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||  |||||||||||||||||||||||||    
T  49872844 ctaatcatttgagaaaactatataattcagtgtaattatatgtg 49872887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 9690346 - 9690275
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 267  Q
    ||||||||||||| ||||||| ||||| |  ||||||||||  | ||||||||||||| ||||||| |||||||    
T  9690346 agacactgacacgctgacaccgctaataaactgagaaaatc--acaattcagtgtaatcatatgtgtcggcgtc 9690275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 22881689 - 22881631
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| |||||| ||||||||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaatta 22881631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 41500779 - 41500717
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||||||||| ||||||||||||| | |||| ||||||| |||||||| | |||||| |||||    
T  41500779 gacactgacatgttgacaccactagtaatttaagaaaatgatataattgaatgtaatcatatg 41500717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 41510957 - 41510895
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||||||||| ||||||||||||| | |||| ||||||| |||||||| | |||||| |||||    
T  41510957 gacactgacatgttgacaccactagtaatttaagaaaatgatataattgaatgtaatcatatg 41510895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 42359522 - 42359464
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||| ||||||  ||||| |||||| ||||||| | |||||||||||||||    
T  42359522 gacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaatta 42359464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 46348456 - 46348398
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  46348456 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaatta 46348398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 229 - 259
Target Start/End: Original strand, 52903269 - 52903299
Alignment:
Q  229 aaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||||||||||||||||||||    
T  52903269 aaaatcatataattcagtgtaattatatgtg 52903299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 9709821 - 9709870
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| |||||||||||||| |||||||  ||||||||||||||    
T  9709821 acaccgctaataatttgagaaaatcacataattcgttgtaattatatgtg 9709870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12707928 - 12707883
Alignment:
Q  213 ccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||||| |||| |||||||||||||||| |||| ||||||||||    
T  12707928 ccactaataatttaagaaaatcatataatttagtgcaattatatgt 12707883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12713382 - 12713337
Alignment:
Q  213 ccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||||| |||| ||||||||| |||||| |||||||||||||||    
T  12713382 ccactaataatttaagaaaatcacataatttagtgtaattatatgt 12713337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 12717473 - 12717428
Alignment:
Q  213 ccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||||| |||| ||||||||| |||||| |||||||||||||||    
T  12717473 ccactaataatttaagaaaatcacataatttagtgtaattatatgt 12717428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 253
Target Start/End: Original strand, 31015050 - 31015087
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaatta 31015087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 36905998 - 36906047
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| || ||||||||||| ||||||||| |||||||||||||    
T  36905998 acaccgctaataatctgagaaaatcacataattcagagtaattatatgtg 36906047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 253
Target Start/End: Complemental strand, 38078733 - 38078676
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||| |||||  ||||| |||||| ||||||| |||||||| ||||||||    
T  38078733 acactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 3e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 34897071 - 34897135
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||| |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  34897071 gacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 34897135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 4786411 - 4786347
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  ||||||| |||| |||| ||||||||| |||||||||||||||||||||||    
T  4786411 gacactgacacgccgacaccattaataatttaagaaaatcacataattcagtgtaattatatgtg 4786347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 39954352 - 39954284
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacgg 263  Q
    ||||| ||||||  |||||| ||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  39954352 gacaccgacacgccgacaccgctaataatttgagaaaatcacataatttagtgtaattatatgtgacgg 39954284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 20679469 - 20679395
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    ||||||||||| || |||||| ||||| |||||||||||||| ||| ||||||||||||||| ||| ||| ||||    
T  20679469 agacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgtcggtgtca 20679395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 14134685 - 14134746
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||| ||||||| ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  14134685 gacacggacacgtcgacaatactaataatttgagaaaatcacataattcagtgtaattatat 14134746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 24362276 - 24362211
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||||  |||||| ||||| |||||||| ||||| |||||||||||||||||||||||    
T  24362276 agacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtg 24362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 12606881 - 12606829
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||    
T  12606881 ctaataatttgagaaaatcatataattcaatgtaattatatgtgtcggtgtca 12606829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 209 - 256
Target Start/End: Original strand, 7658463 - 7658510
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||||||||| |||||||||||| | ||||||||||||||||||||    
T  7658463 gacaccactaataatttgagaaaattacataattcagtgtaattatat 7658510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 189 - 256
Target Start/End: Complemental strand, 12570813 - 12570746
Alignment:
Q  189 gatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||||||||| |||||||||||||| ||||| |||| |||||| |  |||||| |||||||||||||    
T  12570813 gatatagacaccgacacgttgacaccgctaataatttaagaaaaacgcataattaagtgtaattatat 12570746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 12570587 - 12570517
Alignment:
Q  189 gatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||| |||||||||||||  ||||| |||| |||||| || |||||| ||||||||||||||||    
T  12570587 gatacagacaccgacacgttgacactgctaataatttaagaaaaacacataattaagtgtaattatatgtg 12570517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 4611534 - 4611583
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||| ||||| |||||||||||| | ||||||||||||||||||||||    
T  4611534 gacaccgctaataatttgagaaaataacataattcagtgtaattatatgt 4611583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 15816215 - 15816142
Alignment:
Q  182 aagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||| |||||  ||||||||||||  ||||| |||||| |||||| ||||||| |||||| ||||||||||||    
T  15816215 aagcatggatacggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattata 15816142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 196 - 256
Target Start/End: Original strand, 13203628 - 13203688
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||||| ||||  ||| ||||||| |||||||||||| | ||||||||||||||||||||    
T  13203628 acactgatacgtcaacaacactaataatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 13844669 - 13844605
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||  |||||  ||||| |||||||||||||| |||||| ||||||||||||||||    
T  13844669 gacacggacacgccgacactgctaataatttgagaaaatcacataattgagtgtaattatatgtg 13844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 18964163 - 18964227
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  | || ||||||| ||| ||||||||| |||||||| ||||||||||||||    
T  18964163 gacactgacacgtcaagacaactaatttttttagaaaatcacataattcaatgtaattatatgtg 18964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 36934656 - 36934720
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| |||||| |||||| ||||| ||| || ||||||| |||||||| ||||||||||||||    
T  36934656 gacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtg 36934720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 3025558 - 3025597
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaattata 3025597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 242
Target Start/End: Original strand, 11815815 - 11815862
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataatt 242  Q
    ||||||||||||||||||||| |||| ||||||||||||  |||||||    
T  11815815 gacactgacacgttgacaccaataataatttgagaaaatgttataatt 11815862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 14731719 - 14731762
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaattatatgtg 14731762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 24669418 - 24669477
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||| |||||||  |||| ||||||| |||| | |||||||||||||||||    
T  24669418 agacactgacacgctgacaccgttaataatttgaggaaattacataattcagtgtaatta 24669477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 31236629 - 31236586
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||    
T  31236629 ctaataatttgagaaaatcacataattcaatgtaattatatgtg 31236586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 11803267 - 11803309
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||| ||||||||| |||||||||||||||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtg 11803309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 11927137 - 11927095
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||| ||||||| |||||||||||||||||||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaattatatgtg 11927095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 12559158 - 12559116
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||    
T  12559158 ctaataatttgagaaaatgatataattcagtgtaatcatatgt 12559116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 36450827 - 36450769
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| | |||||||||||||||    
T  36450827 gacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaatta 36450769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 256
Target Start/End: Complemental strand, 14634206 - 14634153
Alignment:
Q  203 cacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||| |||||| ||||  |||| ||||||| ||||||||||||||||||||||    
T  14634206 cacgtcgacaccgctaacaatttaagaaaattatataattcagtgtaattatat 14634153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 24017497 - 24017452
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||| ||||||| |||||||| |||||||||||||| |||||||||    
T  24017497 gacatcactaataatttgagacaatcatataattcaatgtaattat 24017452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 26418388 - 26418351
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  26418388 atttgagaaaatcatattattcagtgtaatcatatgtg 26418351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 29447177 - 29447128
Alignment:
Q  201 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaa 250  Q
    ||||||| ||||| |||||| |||||||||||||| |||||||| |||||    
T  29447177 gacacgtcgacacaactaataatttgagaaaatcacataattcaatgtaa 29447128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 34201113 - 34201056
Alignment:
Q  201 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||| ||||||| | |||| |||||||||||| | |||||||| |||||||||||||    
T  34201113 gacacattgacactaataataatttgagaaaatgacataattcaatgtaattatatgt 34201056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 22868028 - 22868092
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||||||||| || ||||||||||| |||||||||||||||||||||||    
T  22868028 gacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtg 22868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 3520416 - 3520351
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||    
T  3520416 agacattgacacgctgacaccgataatcatttgagaaaatcatataattcaatgtaattatatgtg 3520351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 6630986 - 6630921
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  |||||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  6630986 agacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtg 6630921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 32308106 - 32308170
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||| ||||| |||||||||||||| |||||||||||||||| ||||||    
T  32308106 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtg 32308170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 42720963 - 42720899
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||||||||| ||||| |||||| ||||||| |||||| | ||||||||||||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtg 42720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 193 - 268
Target Start/End: Original strand, 5835231 - 5835306
Alignment:
Q  193 tagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    |||||||||| |||  ||||||||||||  ||||||||||| | ||||||||||||||||||||||| ||| ||||    
T  5835231 tagacactgatacgccgacaccactaatagtttgagaaaataacataattcagtgtaattatatgtgtcggtgtca 5835306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 256
Target Start/End: Original strand, 5235971 - 5236033
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||||||||||| |||||| ||||| |||| ||||||| |||||||| |||||||||||||    
T  5235971 agacactgacacgtcgacaccgctaataatttaagaaaattatataatttagtgtaattatat 5236033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 21141049 - 21140995
Alignment:
Q  201 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||| |||||||||||| |||| |||||||||||||||||||||| ||||||    
T  21141049 gacacgtcgacaccactaataatttaagaaaatcatataattcagtgtgattata 21140995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Complemental strand, 22602781 - 22602719
Alignment:
Q  197 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||  ||||||   |||||||||||||||||| |||||||||||||||||||||||    
T  22602781 cactgacacgccgacaccgtaaattatttgagaaaatcacataattcagtgtaattatatgtg 22602719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 23128728 - 23128670
Alignment:
Q  201 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| |||||||| |||| ||||||||||| |||||||||||||||||| |||||||    
T  23128728 gacacgctgacaccaataataatttgagaaaaccatataattcagtgtaatcatatgtg 23128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 27945027 - 27945085
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  |||||||||||| |||||||||||| | |||||||||||||||||    
T  27945027 gacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaatta 27945085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 2948653 - 2948733
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||| ||||||||| |||||||||  |||||| || || |||| |||||||||  ||||| ||||||||||||||||    
T  2948653 atgaagcatggatatagatactgacacgccgacaccgctgataattttagaaaatcacgtaatttagtgtaattatatgtg 2948733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 26733290 - 26733354
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||| |||||| ||||| |||||| ||||||| |||||||||| |||||| |||||    
T  26733290 gacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtg 26733354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 9482905 - 9482984
Alignment:
Q  180 tgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  |||||||||||   |||| | || || |||||||||||||| | |||||||||||||||||||||    
T  9482905 tgaagcacggatacggacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtg 9482984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 20549778 - 20549841
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||   |||||| ||||| ||||||||||||||  ||||||||||||||||||||||    
T  20549778 acactgacacaccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtg 20549841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 5548676 - 5548726
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| || || |||||||||||||| |||||||||||||||||||||||    
T  5548676 gacaccgctgataatttgagaaaatcaaataattcagtgtaattatatgtg 5548726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Original strand, 2034434 - 2034491
Alignment:
Q  202 acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| |||||||||||| ||||||||| ||||||||||| ||||||  ||||||||    
T  2034434 acacgtcgacaccactaataatttgagaatatcatataatttagtgtatatatatgtg 2034491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 15902807 - 15902872
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||| |  ||||||| |||| |||||| ||||||| |||||| ||||||||||||||||    
T  15902807 agacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtg 15902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Complemental strand, 26329456 - 26329383
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtc 267  Q
    |||||||||||||  |||| |  |||| ||||||||||| || | ||||||||||||||||||||| |||||||    
T  26329456 agacactgacacgccgacatcgttaataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtc 26329383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 29787428 - 29787383
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||||    
T  29787428 gacaccgctaataatttgagaaaatcacataattcagtgtaattat 29787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 1401011 - 1401071
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||||||| ||| | | ||||| |||||||||| ||| |||||||||||||||||||    
T  1401011 gacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 4909138 - 4909201
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||| |||||||||| |||| |||||||||||| | |||||||| |||||| |||||||    
T  4909138 acacggacaggttgacaccaataataatttgagaaaattacataattcattgtaatcatatgtg 4909201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 7758321 - 7758372
Alignment:
Q  208 tgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||| |||| ||||||| |||||||||||| ||||||| ||||    
T  7758321 tgacaccactaataattttagaaaattatataattcagtataattatgtgtg 7758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 17851438 - 17851481
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||| ||||||||| |||||||||||||||||||||||    
T  17851438 ctaataattttagaaaatcacataattcagtgtaattatatgtg 17851481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 256
Target Start/End: Complemental strand, 18569124 - 18569069
Alignment:
Q  201 gacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||||| | |||| |||| |||||||||||| |||||| |||||||||||||||    
T  18569124 gacacgttaataccaataatgatttgagaaaatgatataaatcagtgtaattatat 18569069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 258
Target Start/End: Original strand, 23191882 - 23191945
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||||||| |||  |||||| ||||| |||||||||||||| ||| ||||||||||||| ||||    
T  23191882 gacactgatacgccgacaccgctaataatttgagaaaatcacatatttcagtgtaattacatgt 23191945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 2424621 - 2424659
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattat 254  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  2424621 ctaataatttgagaaaatcacataattcagtgtaattat 2424659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Complemental strand, 8239101 - 8239059
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||| |||||||| ||||||||||||||||||||||||    
T  8239101 taataatttaagaaaatcttataattcagtgtaattatatgtg 8239059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 227 - 257
Target Start/End: Original strand, 10377525 - 10377555
Alignment:
Q  227 agaaaatcatataattcagtgtaattatatg 257  Q
    |||||||||||||||||||||||||||||||    
T  10377525 agaaaatcatataattcagtgtaattatatg 10377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 215 - 253
Target Start/End: Original strand, 13300416 - 13300454
Alignment:
Q  215 actaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||| |||||| |||||||||||||||||||||||||    
T  13300416 actaataatttgaaaaaatcatataattcagtgtaatta 13300454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 14729667 - 14729746
Alignment:
Q  179 atgaagcacggatatagacactgacacg----ttgacaccactaattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||||||||||||| | |||| ||||||    |||| ||| ||||| ||||||||||||||  |||||||||||||||||    
T  14729667 atgaagcacggatacaaacacggacacggccattgaaaccgctaataatttgagaaaatcacgtaattcagtgtaattat 14729746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 16341504 - 16341546
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||| |||||| ||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgtaattatatgtg 16341546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 19206050 - 19206100
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||| |||||||||||||| |||||||| | ||||||||||||    
T  19206050 gacaccgctaataatttgagaaaatcacataattcattataattatatgtg 19206100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 22484010 - 22484084
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    |||||||||||||  |||||| ||||| |||| |||||||   |||||||||| |||||||||||| ||| ||||    
T  22484010 agacactgacacgccgacaccgctaataattttagaaaattgcataattcagtataattatatgtgtcggtgtca 22484084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 191 - 257
Target Start/End: Original strand, 41020478 - 41020544
Alignment:
Q  191 tatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||| |||||||||||| ||||| |||||| ||||   ||||||| |||||| ||||||||||||||    
T  41020478 tataaacactgacacgtcgacacaactaataatttacaaaaatcacataatttagtgtaattatatg 41020544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 11890970 - 11890933
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattat 11890933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 17307906 - 17307943
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||| | |||||||||||||||||||||||    
T  17307906 atttgagaaaataacataattcagtgtaattatatgtg 17307943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 25791638 - 25791702
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||  |||||| |||||||||||||||| ||| |||| ||| |||| |||||||||    
T  25791638 agacactgacacgccgacaccgctaattatttgagaaattcacataa-tcaatgtagttatatgtg 25791702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 27732305 - 27732248
Alignment:
Q  202 acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||| |  |||| |||| ||||||| | |||||||||||||||||||||||    
T  27732305 acacgttgacaacgttaataatttaagaaaattacataattcagtgtaattatatgtg 27732248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 92777 - 92851
Alignment:
Q  179 atgaagcacggatatagacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||  ||||||||||||  |||||| ||||| |||||||||||| | |||||||||||||||||    
T  92777 atgaagcacggatacggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaatta 92851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 196 - 258
Target Start/End: Complemental strand, 13360444 - 13360382
Alignment:
Q  196 acactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    |||| ||||||| |||||||||| | |||||||||||||| ||||||||||||||||||||||    
T  13360444 acacagacacgtcgacaccactagtaatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 19040341 - 19040402
Alignment:
Q  198 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||  |||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  19040341 actgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 19040402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 7265666 - 7265602
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||   ||||| ||||| |||||||||||||| |||||||||||||||||||||||    
T  7265666 gacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtg 7265602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 13851722 - 13851786
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||| |||||| ||||| |||||||||||| |  ||||||||||||||||||||||    
T  13851722 gacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtg 13851786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 7723323 - 7723260
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgt 258  Q
    ||||||||||||| |||||  ||||| ||||||||||||||||||||||||  |||||||||||    
T  7723323 gacactgacacgtggacactgctaataatttgagaaaatcatataattcagcataattatatgt 7723260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 7996451 - 7996389
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||||||||| |  |||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  7996451 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 257
Target Start/End: Original strand, 8022350 - 8022412
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    |||||||||| |  |||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  8022350 gacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 256
Target Start/End: Original strand, 9658865 - 9658926
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    ||||||||||||  |||||| ||||| |||| ||||||||| ||||||||||||||||||||    
T  9658865 gacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 19044450 - 19044523
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    ||||||||||||  ||||| |||||| ||||||||| |||| |||||||||||| |||||||||| ||| ||||    
T  19044450 gacactgacacgccgacacgactaataatttgagaatatcacataattcagtgttattatatgtgtcggtgtca 19044523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 9027164 - 9027228
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  |||||| ||||| |||||||| ||||| ||||||| |||||||||||||||    
T  9027164 gacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtg 9027228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 9025546 - 9025503
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| |||||||||||||||||||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaattatatgtg 9025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 7086780 - 7086845
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||||| | |||  ||||| |||||||||||||| |||||| ||||||||||||||||    
T  7086780 agacaccgacacgtcggcactgctaataatttgagaaaatcacataatttagtgtaattatatgtg 7086845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 255
Target Start/End: Complemental strand, 8389530 - 8389485
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||| |||||| |||| |||||||||||||||||||||||||||||    
T  8389530 acactactaataatttaagaaaatcatataattcagtgtaattata 8389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 11591916 - 11591879
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||||||||||||||||||||    
T  11591916 atttgagaaaatcacataattcagtgtaattatatgtg 11591879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 13364751 - 13364714
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||||||||||||||||||| |||||||    
T  13364751 atttgagaaaatcatataattcagtgtaatcatatgtg 13364714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Original strand, 26562702 - 26562739
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||||| |||||||||||||||||||||||    
T  26562702 atttgagaaaatcacataattcagtgtaattatatgtg 26562739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Complemental strand, 30866202 - 30866153
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| |||||||||||||| |||||||| ||||||||||||||    
T  30866202 acaccgctaataatttgagaaaatcacataattcaatgtaattatatgtg 30866153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 3398605 - 3398664
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||||  |||||  ||||| |||||| |||||||||||||||||||||||||||    
T  3398605 gacactgacacgccgacacagctaataatttga-aaaatcatataattcagtgtaattata 3398664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 5732583 - 5732519
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  ||||||  |||| |||||||||||||| ||| || ||||||||||||||||    
T  5732583 gacactgacacgccgacaccgttaataatttgagaaaatcacatattttagtgtaattatatgtg 5732519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 7938102 - 7938162
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||||  |||||  ||||| |||||| |||||||||||||| ||||||||||||    
T  7938102 gacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattata 7938162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 25096408 - 25096480
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgt 266  Q
    |||||| ||||||  |||||||||||| |||||||||||||| |||||  |||||||||| || || ||||||    
T  25096408 agacaccgacacgacgacaccactaataatttgagaaaatcacataatctagtgtaattacatatgtcggcgt 25096480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 259
Target Start/End: Original strand, 9629374 - 9629433
Alignment:
Q  200 tgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||  |||||| | ||| |||||||||||||| |||||||| ||||||||||||||    
T  9629374 tgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtg 9629433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 16833293 - 16833352
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||||  ||||| |||||| |||||| ||||||| ||| |||||||||||||    
T  16833293 agacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaatta 16833352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 21924987 - 21924944
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||    
T  21924987 ctaataatttgagaatatcaaataattcagtgtaattatatgtg 21924944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 24832595 - 24832638
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||||||||||| ||||||| ||||||||||||||||    
T  24832595 ctaataatttgagaaaatcttataatttagtgtaattatatgtg 24832638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 25038141 - 25038086
Alignment:
Q  198 actgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||||||||||||||||  |||| |||||||||||| | |||||| ||||||||||    
T  25038141 actgacacgttgacaccgttaataatttgagaaaattacataatttagtgtaatta 25038086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 255
Target Start/End: Complemental strand, 32511726 - 32511679
Alignment:
Q  208 tgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||| ||||| |||| ||||||||| |||||||||||||||||||    
T  32511726 tgacaccgctaataatttaagaaaatcacataattcagtgtaattata 32511679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 1532225 - 1532290
Alignment:
Q  196 acactgacacgttgacac--cactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||||||| |||||  | ||||| |||||| ||||| | |||||||||||||||||||||||    
T  1532225 acactgacacgtcgacacaccgctaataatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 209 - 259
Target Start/End: Original strand, 7377979 - 7378029
Alignment:
Q  209 gacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||| ||||  |||||||||||||| |||||||| ||||||||||||||    
T  7377979 gacaccgctaaaaatttgagaaaatcacataattcaatgtaattatatgtg 7378029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 8777046 - 8776988
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  ||||| |||||| |||||| ||||||| | |||||||||||||||    
T  8777046 gacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaatta 8776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 9617442 - 9617484
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||| |||||||| ||||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtg 9617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 10770747 - 10770689
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||   |||| |||||| |||||| ||||||| |||||||||||||||||    
T  10770747 gacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaatta 10770689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 16766683 - 16766741
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  16766683 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 16766741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 17341735 - 17341677
Alignment:
Q  197 cactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    ||||||||||  ||||||  |||| |||||| ||||||| |||||||||||||||||||    
T  17341735 cactgacacgccgacaccgttaataatttgataaaatcacataattcagtgtaattata 17341677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 217 - 259
Target Start/End: Original strand, 21142126 - 21142168
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| ||||||||||||||||||||||||| || |||||||||    
T  21142126 taataatttgagaaaatcatataattcagtctagttatatgtg 21142168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 34595120 - 34595178
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    |||| |||||||  ||||| |||||| |||||| ||||||| |||||||||||||||||    
T  34595120 gacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 34595178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 7151413 - 7151462
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| ||||| |||||| ||||||| |||||| ||||||||||||||||    
T  7151413 acacctctaataatttgaaaaaatcacataattaagtgtaattatatgtg 7151462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 17411914 - 17411877
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  17411914 atttaagaaaatcatataattcagtataattatatgtg 17411877  T

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Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 20518330 - 20518395
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||||||||  | ||||||||||  |||||||||||| | |||| ||||| ||||||||||||    
T  20518330 agacactgacacactaacaccactaacaatttgagaaaattacataaatcagtataattatatgtg 20518395  T

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Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 31579276 - 31579239
Alignment:
Q  217 taattatttgagaaaatcatataattcagtgtaattat 254  Q
    |||| |||||||||||||| ||||||||||||||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaattat 31579239  T

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Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 34073399 - 34073358
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatg 257  Q
    ||||| |||||||||||||  |||||||||||||||||||||    
T  34073399 ctaataatttgagaaaatctcataattcagtgtaattatatg 34073358  T

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Target: scaffold0022 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 210 - 256
Target Start/End: Original strand, 90844 - 90890
Alignment:
Q  210 acaccactaattatttgagaaaatcatataattcagtgtaattatat 256  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||    
T  90844 acaccattaataatttgagaaaatcatataattcagtgtaattatat 90890  T

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Target: scaffold0085 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 194 - 259
Target Start/End: Original strand, 26378 - 26443
Alignment:
Q  194 agacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||| |||||||||||| |||||||||||||| |||||||| |||  |||||||||    
T  26378 agacagtgacacgtcgacaccactaataatttgagaaaatcacataattcaatgtcgttatatgtg 26443  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 208 - 259
Target Start/End: Complemental strand, 44585 - 44534
Alignment:
Q  208 tgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||||| ||||  |||||||||||||| |||||||||||||||||||||||    
T  44585 tgacaccgctaaaaatttgagaaaatcacataattcagtgtaattatatgtg 44534  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 13386 - 13444
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  ||||| |||||| |||||||||||||| ||||||||||| |||||    
T  13386 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 13444  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 21941 - 21883
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  ||||| |||||| |||||||||||||| ||||||||||| |||||    
T  21941 gacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaatta 21883  T

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Target: scaffold0036 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 9802 - 9756
Alignment:
Q  213 ccactaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||    
T  9802 ccactaataatttgagaaaatcacttaattcagtgtaattatatgtg 9756  T

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Target: scaffold0361 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 14499 - 14574
Alignment:
Q  179 atgaagcacggatatagacactg-acacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||||  ||||| | |||||  ||||| |||||| |||||| ||||||| |||||||||||||||||    
T  14499 atgaagcacggatacggacaccggacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatta 14574  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 135364 - 135321
Alignment:
Q  216 ctaattatttgagaaaatcatataattcagtgtaattatatgtg 259  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||    
T  135364 ctaataatttgagaaaatcacataattctgtgtaattatatgtg 135321  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Complemental strand, 178892 - 178833
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcat-ataattcagtgtaatta 253  Q
    ||||||||||||  ||||| |||||| |||||| |||||||| |||||||||||||||||    
T  178892 gacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaatta 178833  T

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Target: scaffold0103 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 51797 - 51855
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaatta 253  Q
    ||||||||||||  |||||  ||||| |||||| ||||||| |||||||||||||||||    
T  51797 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatta 51855  T

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Target: scaffold0227 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 255
Target Start/End: Complemental strand, 7401 - 7324
Alignment:
Q  179 atgaagcacggatatagacactg-acacgttgacaccactaattatttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||||||||| |||||| | |||||  ||||| |||||| |||||  ||||||| |||||| ||||||||||||    
T  7401 atgaagcacggatacagacaccggacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattata 7324  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 53193 - 53226
Alignment:
Q  222 atttgagaaaatcatataattcagtgtaattata 255  Q
    |||||||||||||| |||||||||||||||||||    
T  53193 atttgagaaaatcacataattcagtgtaattata 53226  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 240094 - 240021
Alignment:
Q  195 gacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatatgtgacggcgtca 268  Q
    ||||| |||| ||||||| |  |||| |||||||||||| |||||||||| |||||| ||||||| ||| ||||    
T  240094 gacacggacatgttgacaactataataatttgagaaaataatataattcaatgtaatcatatgtgtcggtgtca 240021  T

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