View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1969_low_68 (Length: 234)
Name: NF1969_low_68
Description: NF1969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1969_low_68 |
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Alignment Details
Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 8792054 - 8791836
Alignment:
| Q |
1 |
ctcctttgtcgtttacttgttctctgctcacagcaaagtcgagcctgaagttctcaggcgctttctccttcatcttttcaaattcctgtaccataaaatt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8792054 |
ctcctttgtcgtttacttgttctctgctcacagcaaagtcgagcctgaagttctcaggcgctttctccttcatcttttcaaattcctgtaccataaaatt |
8791955 |
T |
|
| Q |
101 |
aaagtagtataaagtataaaacttcccgttctacatagcttgtagccgaatttcatgaatagtgagaaaagtttgattcatctcacctccttataaagca |
200 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8791954 |
aaagtagtataaagtataaaacttcccattctacatagcttgtagccgaatttcatgaatagtgagaaaagtttgattcatctcacctccttataaagca |
8791855 |
T |
|
| Q |
201 |
gtgagctgcttgtggggac |
219 |
Q |
| |
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||||||||||||||||||| |
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| T |
8791854 |
gtgagctgcttgtggggac |
8791836 |
T |
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