View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19701_low_1 (Length: 389)

Name: NF19701_low_1
Description: NF19701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19701_low_1
NF19701_low_1
[»] chr8 (34 HSPs)
chr8 (269-381)||(15258919-15259031)
chr8 (186-258)||(32477878-32477950)
chr8 (269-376)||(34307214-34307321)
chr8 (267-376)||(16383373-16383482)
chr8 (269-376)||(24307788-24307895)
chr8 (271-375)||(12831047-12831151)
chr8 (271-375)||(15197333-15197437)
chr8 (271-375)||(34012292-34012396)
chr8 (270-381)||(37038478-37038589)
chr8 (267-381)||(5957826-5957940)
chr8 (269-375)||(14547920-14548026)
chr8 (262-376)||(16056396-16056510)
chr8 (267-341)||(24307625-24307699)
chr8 (271-375)||(504117-504221)
chr8 (271-375)||(1179936-1180040)
chr8 (268-376)||(10284626-10284734)
chr8 (271-375)||(43414577-43414681)
chr8 (271-341)||(30479504-30479574)
chr8 (270-376)||(32032724-32032829)
chr8 (271-376)||(38229429-38229533)
chr8 (271-375)||(23122593-23122697)
chr8 (271-375)||(40423939-40424043)
chr8 (269-375)||(4854859-4854965)
chr8 (273-375)||(10621083-10621185)
chr8 (276-375)||(9122200-9122289)
chr8 (271-375)||(15048178-15048281)
chr8 (269-381)||(42221513-42221625)
chr8 (271-348)||(14055615-14055692)
chr8 (270-375)||(44507083-44507188)
chr8 (290-381)||(8841422-8841513)
chr8 (270-380)||(17443824-17443934)
chr8 (271-341)||(20074964-20075034)
chr8 (271-334)||(30183912-30183975)
chr8 (17-49)||(32478088-32478120)
[»] chr2 (36 HSPs)
chr2 (268-376)||(26891499-26891607)
chr2 (270-375)||(5574484-5574589)
chr2 (271-381)||(17819994-17820104)
chr2 (267-381)||(33436090-33436204)
chr2 (276-381)||(28863460-28863565)
chr2 (277-381)||(3439985-3440089)
chr2 (271-375)||(13438343-13438447)
chr2 (271-375)||(17473020-17473124)
chr2 (267-375)||(42257189-42257297)
chr2 (269-375)||(9058478-9058584)
chr2 (269-375)||(30915461-30915567)
chr2 (271-376)||(38732354-38732459)
chr2 (267-376)||(45097730-45097839)
chr2 (270-382)||(7465724-7465836)
chr2 (271-375)||(40613898-40614002)
chr2 (269-375)||(10249378-10249484)
chr2 (271-341)||(43490121-43490191)
chr2 (270-371)||(32505648-32505749)
chr2 (271-375)||(28381651-28381755)
chr2 (271-375)||(40701478-40701582)
chr2 (276-375)||(19930816-19930915)
chr2 (267-381)||(20700811-20700925)
chr2 (271-376)||(27864704-27864809)
chr2 (269-381)||(15428730-15428842)
chr2 (268-375)||(38882807-38882916)
chr2 (289-376)||(2997482-2997569)
chr2 (269-336)||(17823782-17823849)
chr2 (271-371)||(4060685-4060785)
chr2 (267-340)||(13365347-13365422)
chr2 (267-375)||(38273138-38273246)
chr2 (270-381)||(2533123-2533233)
chr2 (314-381)||(3737986-3738053)
chr2 (270-336)||(33436210-33436276)
chr2 (270-375)||(36168835-36168940)
chr2 (276-381)||(41575142-41575248)
chr2 (325-381)||(3154197-3154253)
[»] chr7 (41 HSPs)
chr7 (269-381)||(36208171-36208283)
chr7 (276-375)||(3784000-3784099)
chr7 (269-375)||(8080379-8080485)
chr7 (270-375)||(36361909-36362014)
chr7 (267-375)||(38837213-38837321)
chr7 (269-375)||(7389387-7389493)
chr7 (267-381)||(18207176-18207289)
chr7 (270-375)||(3434561-3434666)
chr7 (270-375)||(36362025-36362130)
chr7 (270-340)||(22343360-22343430)
chr7 (270-376)||(41915740-41915846)
chr7 (270-375)||(46033797-46033902)
chr7 (263-375)||(19436183-19436295)
chr7 (271-375)||(38267040-38267144)
chr7 (270-376)||(12310905-12311009)
chr7 (269-376)||(38044195-38044302)
chr7 (268-375)||(40957704-40957811)
chr7 (267-361)||(7727902-7727996)
chr7 (271-381)||(41423682-41423792)
chr7 (271-375)||(19329842-19329946)
chr7 (271-375)||(35137533-35137637)
chr7 (271-381)||(4999504-4999614)
chr7 (271-376)||(8238212-8238318)
chr7 (271-341)||(32564456-32564526)
chr7 (270-375)||(26296643-26296748)
chr7 (271-374)||(21234401-21234504)
chr7 (272-375)||(35522877-35522980)
chr7 (271-362)||(46374811-46374902)
chr7 (271-381)||(39255914-39256023)
chr7 (301-382)||(16374813-16374894)
chr7 (267-332)||(35468894-35468959)
chr7 (268-336)||(10343598-10343666)
chr7 (268-320)||(11044185-11044237)
chr7 (271-339)||(40846145-40846213)
chr7 (276-375)||(3694372-3694471)
chr7 (276-375)||(32951489-32951588)
chr7 (267-381)||(45223038-45223152)
chr7 (276-381)||(2318233-2318338)
chr7 (317-373)||(27744307-27744363)
chr7 (271-307)||(31735884-31735920)
chr7 (292-336)||(32045858-32045902)
[»] chr4 (38 HSPs)
chr4 (271-375)||(6034044-6034148)
chr4 (267-375)||(42044363-42044471)
chr4 (271-375)||(11511458-11511562)
chr4 (267-381)||(50052418-50052532)
chr4 (266-376)||(19670711-19670821)
chr4 (270-376)||(47986207-47986313)
chr4 (269-375)||(48183045-48183151)
chr4 (270-376)||(50813887-50813993)
chr4 (267-375)||(480443-480551)
chr4 (269-341)||(29547989-29548061)
chr4 (269-375)||(24995103-24995209)
chr4 (271-375)||(41236347-41236451)
chr4 (271-362)||(50526180-50526271)
chr4 (271-341)||(8343193-8343263)
chr4 (268-381)||(29239883-29239996)
chr4 (269-341)||(32766956-32767028)
chr4 (269-341)||(55475189-55475261)
chr4 (271-341)||(55079744-55079814)
chr4 (271-376)||(3481654-3481759)
chr4 (270-375)||(29234241-29234346)
chr4 (269-381)||(23608233-23608345)
chr4 (269-381)||(48647716-48647828)
chr4 (271-375)||(54473529-54473633)
chr4 (289-376)||(17983738-17983825)
chr4 (315-381)||(18769037-18769103)
chr4 (270-344)||(44536773-44536846)
chr4 (271-336)||(40574779-40574844)
chr4 (271-375)||(31910192-31910296)
chr4 (269-380)||(29977883-29977994)
chr4 (271-341)||(18924525-18924595)
chr4 (270-381)||(28480258-28480369)
chr4 (270-381)||(28481133-28481244)
chr4 (270-381)||(28482008-28482119)
chr4 (275-375)||(53352562-53352661)
chr4 (271-382)||(29535377-29535487)
chr4 (314-381)||(56300155-56300222)
chr4 (315-381)||(18769153-18769219)
chr4 (315-375)||(41823926-41823986)
[»] chr3 (40 HSPs)
chr3 (274-381)||(26754698-26754805)
chr3 (267-375)||(49607410-49607518)
chr3 (269-375)||(11907369-11907475)
chr3 (271-380)||(14623830-14623939)
chr3 (271-375)||(53982011-53982115)
chr3 (271-375)||(33644200-33644304)
chr3 (275-375)||(52629304-52629404)
chr3 (270-381)||(48375696-48375807)
chr3 (276-375)||(48587087-48587186)
chr3 (269-375)||(41189760-41189866)
chr3 (271-340)||(45058584-45058652)
chr3 (271-375)||(26141528-26141632)
chr3 (269-381)||(33118841-33118953)
chr3 (271-381)||(8076393-8076503)
chr3 (269-347)||(11095377-11095455)
chr3 (269-375)||(54868891-54868997)
chr3 (269-374)||(27714888-27714993)
chr3 (267-375)||(11347918-11348026)
chr3 (276-380)||(13898046-13898150)
chr3 (267-375)||(31456685-31456793)
chr3 (270-375)||(17470404-17470509)
chr3 (271-375)||(51419356-51419460)
chr3 (269-381)||(1758446-1758560)
chr3 (270-336)||(8956761-8956827)
chr3 (276-381)||(30801723-30801828)
chr3 (270-342)||(36331407-36331479)
chr3 (268-356)||(36707439-36707527)
chr3 (270-381)||(24699944-24700055)
chr3 (270-344)||(35536625-35536699)
chr3 (271-381)||(41080709-41080817)
chr3 (274-344)||(42823114-42823184)
chr3 (270-336)||(21746216-21746284)
chr3 (271-375)||(20764911-20765015)
chr3 (269-341)||(35965804-35965876)
chr3 (271-375)||(47531865-47531969)
chr3 (270-373)||(9562998-9563101)
chr3 (270-341)||(25395363-25395434)
chr3 (269-380)||(35093583-35093694)
chr3 (293-376)||(36331324-36331407)
chr3 (276-381)||(25407137-25407243)
[»] chr5 (27 HSPs)
chr5 (263-374)||(13811644-13811755)
chr5 (267-381)||(18520874-18520988)
chr5 (271-381)||(35943882-35943992)
chr5 (270-375)||(2740273-2740378)
chr5 (268-376)||(3921260-3921368)
chr5 (271-371)||(14831814-14831914)
chr5 (269-376)||(39688892-39688999)
chr5 (271-375)||(28177775-28177879)
chr5 (271-375)||(33149634-33149738)
chr5 (265-376)||(31008982-31009093)
chr5 (270-376)||(2252163-2252269)
chr5 (269-375)||(36732938-36733044)
chr5 (270-375)||(6679697-6679802)
chr5 (271-375)||(26720516-26720620)
chr5 (271-375)||(26990265-26990369)
chr5 (271-375)||(35785199-35785303)
chr5 (271-375)||(40145407-40145511)
chr5 (269-375)||(15409606-15409712)
chr5 (271-375)||(42414298-42414402)
chr5 (271-380)||(33825315-33825424)
chr5 (275-334)||(10356638-10356698)
chr5 (291-378)||(16327921-16328008)
chr5 (267-330)||(36875644-36875707)
chr5 (315-381)||(21370048-21370114)
chr5 (270-362)||(41470425-41470517)
chr5 (289-340)||(10227925-10227976)
chr5 (268-381)||(38296200-38296313)
[»] scaffold0321 (1 HSPs)
scaffold0321 (267-375)||(10105-10213)
[»] chr6 (22 HSPs)
chr6 (270-375)||(11427615-11427722)
chr6 (271-375)||(17598554-17598658)
chr6 (268-376)||(30341355-30341463)
chr6 (269-376)||(15990037-15990144)
chr6 (271-376)||(15508019-15508124)
chr6 (270-375)||(31976247-31976352)
chr6 (278-375)||(32869685-32869782)
chr6 (276-375)||(22880654-22880753)
chr6 (271-380)||(31953021-31953130)
chr6 (275-380)||(9379703-9379808)
chr6 (267-375)||(15832573-15832681)
chr6 (267-375)||(23128123-23128231)
chr6 (268-375)||(6209461-6209568)
chr6 (267-381)||(12732478-12732592)
chr6 (276-380)||(28536479-28536581)
chr6 (271-375)||(29857827-29857931)
chr6 (315-381)||(30870058-30870124)
chr6 (267-336)||(31110796-31110863)
chr6 (271-376)||(4231548-4231653)
chr6 (283-347)||(31109424-31109488)
chr6 (270-337)||(22422052-22422119)
chr6 (278-375)||(946383-946480)
[»] chr1 (34 HSPs)
chr1 (268-371)||(2581912-2582015)
chr1 (268-375)||(32813244-32813351)
chr1 (271-381)||(6260870-6260980)
chr1 (267-376)||(5958995-5959104)
chr1 (272-381)||(44453980-44454089)
chr1 (271-376)||(50590995-50591100)
chr1 (271-375)||(9474872-9474976)
chr1 (271-375)||(47452316-47452420)
chr1 (270-381)||(51898673-51898784)
chr1 (270-375)||(50630457-50630562)
chr1 (271-375)||(3000319-3000423)
chr1 (271-375)||(37649198-37649302)
chr1 (267-375)||(38595150-38595258)
chr1 (271-361)||(47748443-47748532)
chr1 (271-371)||(48489308-48489400)
chr1 (267-375)||(8346384-8346492)
chr1 (271-375)||(27564731-27564835)
chr1 (271-375)||(48716278-48716382)
chr1 (269-375)||(38632317-38632423)
chr1 (271-341)||(41608523-41608593)
chr1 (270-375)||(37926434-37926539)
chr1 (271-375)||(43132-43236)
chr1 (276-375)||(44548372-44548471)
chr1 (276-361)||(26274437-26274522)
chr1 (263-347)||(23597115-23597199)
chr1 (269-375)||(45044556-45044662)
chr1 (271-336)||(3302568-3302633)
chr1 (270-375)||(41758804-41758909)
chr1 (271-375)||(26440734-26440838)
chr1 (270-341)||(7740732-7740803)
chr1 (269-336)||(49811562-49811629)
chr1 (276-362)||(11152387-11152472)
chr1 (301-375)||(13414791-13414865)
chr1 (301-341)||(44332401-44332441)
[»] scaffold0316 (1 HSPs)
scaffold0316 (271-376)||(17058-17159)
[»] scaffold1268 (1 HSPs)
scaffold1268 (271-381)||(919-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (271-381)||(919-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (287-360)||(152514-152587)
[»] scaffold0237 (1 HSPs)
scaffold0237 (271-375)||(4029-4133)


Alignment Details
Target: chr8 (Bit Score: 77; Significance: 1e-35; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 15259031 - 15258919
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| | || |||||||| |||||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  369 tctctttcatctc 381  Q
    |||||||| ||||    
T  15258931 tctctttcctctc 15258919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 258
Target Start/End: Complemental strand, 32477950 - 32477878
Alignment:
Q  186 tgtatcccatttgcgaattcagttgtgttttttagacaataaatgtatatgtttacttttatttctctaatac 258  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  32477950 tgtatcccatttgcgaattcagttgtgttttttagacaataaatgtatatgtttacttttatttctctcatac 32477878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 269 - 376
Target Start/End: Original strand, 34307214 - 34307321
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  |||| ||||||||||  || ||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  369 tctctttc 376  Q
    ||||||||    
T  34307314 tctctttc 34307321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 267 - 376
Target Start/End: Original strand, 16383373 - 16383482
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  ||     
T  16383373 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 16383472  T
Q  367 tttctctttc 376  Q
    ||||||||||    
T  16383473 tttctctttc 16383482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 376
Target Start/End: Complemental strand, 24307895 - 24307788
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||| |||||| ||  || | ||||||||||  || ||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  369 tctctttc 376  Q
    ||||||||    
T  24307795 tctctttc 24307788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 12831047 - 12831151
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||| ||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  371 tcttt 375  Q
    |||||    
T  12831147 tcttt 12831151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 15197333 - 15197437
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||| |||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  371 tcttt 375  Q
    |||||    
T  15197433 tcttt 15197437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 34012396 - 34012292
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||||||| |||||| || | |||||||||| |||||| ||||| || |||||||| ||||||||||||| || ||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  371 tcttt 375  Q
    |||||    
T  34012296 tcttt 34012292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 381
Target Start/End: Original strand, 37038478 - 37038589
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||| | ||||||||||||||| || | |||||||||| |||||||||||| || |||||||| ||||||||||||| || |||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  370 ctctttcatctc 381  Q
    || |||| ||||    
T  37038578 ctatttcctctc 37038589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 5957826 - 5957940
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||| ||| ||||||||||||||  |||||||||||||||| || | |||||||||| |||||||||||| || |||||||| ||||||||||| | ||     
T  5957826 aaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacac 5957925  T
Q  367 tttctctttcatctc 381  Q
    |||||||||| ||||    
T  5957926 tttctctttcctctc 5957940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 14547920 - 14548026
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| | |||||||||||||||||||||||||||||| |  | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  369 tctcttt 375  Q
    |||||||    
T  14548020 tctcttt 14548026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 262 - 376
Target Start/End: Complemental strand, 16056510 - 16056396
Alignment:
Q  262 caaagaaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaag 361  Q
    |||| ||||||||||||||||||| ||| ||||| ||| |||||||||||| |||||||||| ||||||||||||||||| ||  || | ||||||||||    
T  16056510 caaaaaaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaag 16056411  T
Q  362 cgcattttctctttc 376  Q
      || ||||||||||    
T  16056410 tacactttctctttc 16056396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 267 - 341
Target Start/End: Original strand, 24307625 - 24307699
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| |||||||||| ||||||    
T  24307625 aaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctgatatgtgg 24307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 504221 - 504117
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| |  | |||||||||| |||||||||||| || |||||||| | ||||||||||| ||  |||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattc 504122  T
Q  371 tcttt 375  Q
    |||||    
T  504121 tcttt 504117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 1180040 - 1179936
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||||||| |||||| || | |||||||||| |||||||||||| || |||| ||| || |||||||||| || ||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  371 tcttt 375  Q
    |||||    
T  1179940 tcttt 1179936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 268 - 376
Target Start/End: Complemental strand, 10284734 - 10284626
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    |||||||||||||||||||||||||||| ||| |||||||  | | |||||||||| |||||| ||||| || |||||||| | ||||||||||| || |    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  368 ttctctttc 376  Q
    |||||||||    
T  10284634 ttctctttc 10284626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 43414681 - 43414577
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| |||||| |||||| ||| || | |||||||||| |||||||| ||| |||||||| || ||||||||||||| || ||||    
T  43414681 gagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttc 43414582  T
Q  371 tcttt 375  Q
    |||||    
T  43414581 tcttt 43414577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 30479574 - 30479504
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| ||||||||||||||||||||| || | |||| |||||||||||||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtgg 30479504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 270 - 376
Target Start/End: Original strand, 32032724 - 32032829
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||| |||||||||||||||||||||| ||| |||| ||||| ||||||||||||||||| ||  || |||| |||||||  || |||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacat-ccttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  370 ctctttc 376  Q
    |||||||    
T  32032823 ctctttc 32032829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 38229429 - 38229533
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||  |||| |||||||||||||||   |||| ||||||||| |||||||||||||||||||||||| || | | |||||| |||||||    
T  38229429 gagttatgatacatgaacactcttaggtggcaatacgctcctg-acacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttc 38229527  T
Q  371 tctttc 376  Q
    ||||||    
T  38229528 tctttc 38229533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 23122697 - 23122593
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||| ||||||||||| |  | |||||||||| |||||||||||| || |||||||| | |||||| |||| || ||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  371 tcttt 375  Q
    |||||    
T  23122597 tcttt 23122593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 40424043 - 40423939
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||| ||||||||||||||||||| || | |||| ||||| |||||||||||| || |||| ||| | ||||||||||| || ||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  371 tcttt 375  Q
    |||||    
T  40423943 tcttt 40423939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 4854965 - 4854859
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||| ||||||||||||||||| || |  ||||| |||||||||||||| |||||| ||| || | || |||||||| || ||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  369 tctcttt 375  Q
    |||||||    
T  4854865 tctcttt 4854859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 273 - 375
Target Start/End: Complemental strand, 10621185 - 10621083
Alignment:
Q  273 gttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctc 372  Q
    ||||||||||||||||| |||||||||| |||||| || | |||||||||| |||||||||||| || | ||| |  ||||||||||||| || ||||||    
T  10621185 gttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctc 10621086  T
Q  373 ttt 375  Q
    |||    
T  10621085 ttt 10621083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 9122200 - 9122289
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    ||||||||||||||||||||||||||||||||          |||||| ||||||||||||||| |||||||| ||||||||||||| || |||||||||    
T  9122200 atgatacatagacacccttaggtggcaataca----------cccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttt 9122289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 15048281 - 15048178
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| || | |||| ||||| |||||||||||| || | ||| || | ||||||||||| || ||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgaca-ccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  371 tcttt 375  Q
    |||||    
T  15048182 tcttt 15048178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 42221513 - 42221625
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||| ||| ||||||||| |||||||| |||||||||||||| |||||||||||| ||  |||  || | |||  |||||| || ||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  369 tctctttcatctc 381  Q
    |||||||||||||    
T  42221613 tctctttcatctc 42221625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 348
Target Start/End: Complemental strand, 14055692 - 14055615
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtg 348  Q
    |||||||||||||| |||||||||||||| |||||||  ||| |||| ||||| |||||||| |||||| ||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtg 14055615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 44507188 - 44507083
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| ||||||||||||||||||||||||| ||||||  | |  ||||||||| |||||||||||| || |||||||| | |||| ||||||  | |||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  370 ctcttt 375  Q
    ||||||    
T  44507088 ctcttt 44507083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 381
Target Start/End: Complemental strand, 8841513 - 8841422
Alignment:
Q  290 cccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    ||||||||||||| |||| || | |||||||||| |||||||| ||| || |||||||| | ||||||||||| || |||||||||| ||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctc 8841422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 380
Target Start/End: Original strand, 17443824 - 17443934
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||||| ||||||||| |||||||   ||  |||| |||| ||||||||||||||| |||| ||| | ||| |||||   || |||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  370 ctctttcatct 380  Q
    |||||||||||    
T  17443924 ctctttcatct 17443934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 20075034 - 20074964
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    |||| |||||||||||||| |||||||||||||||||  | | ||||||||||||||||| ||||| ||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgtgg 20074964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 334
Target Start/End: Complemental strand, 30183975 - 30183912
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctga 334  Q
    |||| |||||||||| ||| ||||| |||||||||||| ||||||||| || | ||||||||||    
T  30183975 gagtaatgatacatatacatccttacgtggcaatacattcctggacactcatacaaaaatctga 30183912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 32478120 - 32478088
Alignment:
Q  17 atgtttgtatatgaatcttagaattgaagtttt 49  Q
    ||||||| |||||||||||||||||||||||||    
T  32478120 atgtttgcatatgaatcttagaattgaagtttt 32478088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 268 - 376
Target Start/End: Complemental strand, 26891607 - 26891499
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    ||||||||||||||||||| |||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||| | | || |||||| ||||    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  368 ttctctttc 376  Q
    |||||||||    
T  26891507 ttctctttc 26891499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 5574589 - 5574484
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| ||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||| || |||||||| ||||||||||||| || |||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  370 ctcttt 375  Q
    ||||||    
T  5574489 ctcttt 5574484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 17820104 - 17819994
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| |  |||||||||||||| |||| |||||||||| |||||||||||||||||| ||||| | ||| ||||| | |||||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  371 tctttcatctc 381  Q
    |||||||||||    
T  17820004 tctttcatctc 17819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 33436204 - 33436090
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||| ||| || |||||||| | ||||||||||| ||     
T  33436204 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacac 33436105  T
Q  367 tttctctttcatctc 381  Q
    |||||||||| ||||    
T  33436104 tttctctttcctctc 33436090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 28863460 - 28863565
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || |||||||||    
T  28863460 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 28863559  T
Q  376 catctc 381  Q
     |||||    
T  28863560 tatctc 28863565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 277 - 381
Target Start/End: Original strand, 3439985 - 3440089
Alignment:
Q  277 tgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttc 376  Q
    |||||| ||||||||||||||||||||||||  |||||||||||||| |||||||| ||||||| | ||||| | ||||||||||| |||||||||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttc 3440084  T
Q  377 atctc 381  Q
     ||||    
T  3440085 ctctc 3440089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 13438343 - 13438447
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||| |||||||||| | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  371 tcttt 375  Q
    |||||    
T  13438443 tcttt 13438447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 17473020 - 17473124
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||| |||||||||| || | |||||||||| |||||||||||| || |||||||| ||||||||||||| || ||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  371 tcttt 375  Q
    |||||    
T  17473120 tcttt 17473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 42257189 - 42257297
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||||||| | |||||||||||||||||  | ||||||||||||||||||||||| |||| ||| || | ||||||||||| ||     
T  42257189 aaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacac 42257288  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  42257289 tttctcttt 42257297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 9058478 - 9058584
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||| ||| | ||||||||||| || ||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  369 tctcttt 375  Q
    |||||||    
T  9058578 tctcttt 9058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 30915461 - 30915567
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||||||||||||||| || | ||| ||||||||||||||||||| || |||||||| | |||| |||||| || ||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  369 tctcttt 375  Q
    |||||||    
T  30915561 tctcttt 30915567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 38732354 - 38732459
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||| ||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||  || | ||||||||||  || ||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  371 tctttc 376  Q
    ||||||    
T  38732454 tctttc 38732459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 376
Target Start/End: Complemental strand, 45097839 - 45097730
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| | ||||||||||||||||| ||  || | ||||||||||  ||     
T  45097839 aaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacac 45097740  T
Q  367 tttctctttc 376  Q
    ||||||||||    
T  45097739 tttctctttc 45097730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 7465836 - 7465724
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| ||||||||||||||||||||| |||||||||| || | |||||||||| |||||||||||| || |||||||| | ||| ||||||| || |||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  370 ctctttcatctct 382  Q
    |||||| ||||||    
T  7465736 ctcttttatctct 7465724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 40614002 - 40613898
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| || | |||||||||| |||||||||||| |||| ||| || | ||||||||||| || ||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  371 tcttt 375  Q
    |||||    
T  40613902 tcttt 40613898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 10249484 - 10249378
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||||||| ||||||| |  | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  369 tctcttt 375  Q
    |||||||    
T  10249384 tctcttt 10249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 43490121 - 43490191
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| ||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtgg 43490191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 270 - 371
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||||||||||||| ||||||| |  | |||||||||| |||||||||||| || |||||||| | ||||||||||| || |||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  370 ct 371  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 28381755 - 28381651
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| |  | |||||||||| |||||||||||| || ||||| || |  |||||||||| || ||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  371 tcttt 375  Q
    |||||    
T  28381655 tcttt 28381651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 40701478 - 40701582
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| |  | |||||||||| |||||||||||| || || ||||| | ||||||||| | || ||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  371 tcttt 375  Q
    |||||    
T  40701578 tcttt 40701582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 19930915 - 19930816
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||||||||||||||||||||||| || | |||| ||||| |||||||||||| || |||| ||| | ||||||||| | || |||||||||    
T  19930915 atgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttt 19930816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 20700811 - 20700925
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||| ||||| ||||||||||| || | ||| || ||| |||||||||||| || |||||||| | |||||| |||| ||     
T  20700811 aaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacac 20700910  T
Q  367 tttctctttcatctc 381  Q
    |||||||||| ||||    
T  20700911 tttctctttcctctc 20700925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 27864704 - 27864809
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||| ||||||||||| || | |||| ||||| |||||||||||| ||  ||||||| | |||||| |||| || ||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  371 tctttc 376  Q
    ||||||    
T  27864804 tctttc 27864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 15428842 - 15428730
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| ||| ||||| ||||| ||||| ||||  |||| |||| ||||||||||||||||| || || || ||| | ||| | |||||    
T  15428842 aagagttatgatacataaacatccttatgtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattt 15428743  T
Q  369 tctctttcatctc 381  Q
    |||||||||||||    
T  15428742 tctctttcatctc 15428730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 38882916 - 38882807
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaa---tcccgcacaagcgc 364  Q
    ||||||| |||||||||||||||||||||||||||||| | || | |||| ||||| |||||||||||| || |||||||| |    |||||||||||||    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgc 38882818  T
Q  365 attttctcttt 375  Q
    | |||||||||    
T  38882817 actttctcttt 38882807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 2997569 - 2997482
Alignment:
Q  289 acccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttc 376  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || ||||||||||    
T  2997569 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 2997482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 336
Target Start/End: Original strand, 17823782 - 17823849
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    |||||| |||||||||| ||| |||||||||||||||||| |||| ||||||||| ||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgaca 17823849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 371
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||| ||||||| |  | |||| ||||| |||||||||||| || || ||||| |||||||| |||| || ||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  371 t 371  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 340
Target Start/End: Original strand, 13365347 - 13365422
Alignment:
Q  267 aaaagagttatgatacatagacac--ccttaggtggcaatacatccctggacacccacataaaaatctgacatgtg 340  Q
    ||||||||||||||||||| ||||  |||||| |||||||| | |||| |||||||||| ||||||||||||||||    
T  13365347 aaaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtg 13365422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 38273246 - 38273138
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||||||||||||||||||  ||||| |||||||||| || |  ||||||||| |||||||||||| || | ||| || | ||||||| ||| ||     
T  38273246 aaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacac 38273147  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  38273146 tttctcttt 38273138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 381
Target Start/End: Original strand, 2533123 - 2533233
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||||| ||||| |||||||||||||| | |||| ||||| |||||||||||| || | ||| |  | ||||||||||| || |||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgaca-ccacacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T
Q  370 ctctttcatctc 381  Q
     ||||| |||||    
T  2533222 ttcttttatctc 2533233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 314 - 381
Target Start/End: Original strand, 3737986 - 3738053
Alignment:
Q  314 gacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    |||||||||| |||||||||||||||||||| ||| | ||||||||||| |||||||| |||| ||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttctttttcctctc 3738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 33436210 - 33436276
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    ||||| |||||||||||||| |||||| |||||||||| |  | |||||||||||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgaca 33436276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 36168835 - 36168940
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||||| |||||| || |||||||||| |  || |||||| |||||| ||||| |||| ||| || | |||||||||||  | |||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  370 ctcttt 375  Q
    ||||||    
T  36168935 ctcttt 36168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 381
Target Start/End: Original strand, 41575142 - 41575248
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatccc-gcacaagcgcattttctctt 374  Q
    |||||||||||||| |||||| ||| |||||| || | ||||  |||| |||||| ||||||||||||| ||| | |||  ||||||| || ||||||||    
T  41575142 atgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctt 41575241  T
Q  375 tcatctc 381  Q
    |||||||    
T  41575242 tcatctc 41575248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 3154197 - 3154253
Alignment:
Q  325 aaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    |||||||||||| |||||||| || ||||||| ||| | || |||||||||||||||    
T  3154197 aaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctctttcatctc 3154253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 36208171 - 36208283
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||||||||||||||||||||||||||||| ||||||| | | |||||||||| ||||| |||||||||||||||||| | || |||||||| |||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  369 tctctttcatctc 381  Q
    |||||||| ||||    
T  36208271 tctctttcctctc 36208283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 3784000 - 3784099
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||| || |||||||| ||||||||||||| || |||||||||    
T  3784000 atgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttt 3784099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 8080485 - 8080379
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||| || |||||||| | ||||||||||| || ||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  369 tctcttt 375  Q
    |||||||    
T  8080385 tctcttt 8080379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 36362014 - 36361909
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||| || |||||||| | ||| ||||||| || |||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  370 ctcttt 375  Q
    ||||||    
T  36361914 ctcttt 36361909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 38837213 - 38837321
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||||||||||||||||||||| || || ||||| ||| |||||||||||| || |||||||| | ||||||||||| ||     
T  38837213 aaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 38837312  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  38837313 tttctcttt 38837321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 7389387 - 7389493
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| ||||||||||||||||||||||||||||||||  | | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  369 tctcttt 375  Q
    |||||||    
T  7389487 tctcttt 7389493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 18207176 - 18207289
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||||||| ||||||||||||||||| | || |||||||| | |||||||| ||| |||| |||||||| ||| ||||||| ||     
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacac 18207274  T
Q  367 tttctctttcatctc 381  Q
    |||||||||||||||    
T  18207275 tttctctttcatctc 18207289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 3434561 - 3434666
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||| ||||||||||||||||| || | |||||||||| ||||| |||||| || |||||||| ||||||||||||| || |||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  370 ctcttt 375  Q
    ||||||    
T  3434661 ctcttt 3434666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 36362025 - 36362130
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| ||||||||||||||||||||||||| ||||||||| | |||||||||| |||||||||||| || |||||||| | ||| ||||||| || |||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  370 ctcttt 375  Q
    ||||||    
T  36362125 ctcttt 36362130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 340
Target Start/End: Original strand, 22343360 - 22343430
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtg 340  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtg 22343430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 376
Target Start/End: Original strand, 41915740 - 41915846
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||| ||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||| ||  || | ||||||||||  || |||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  370 ctctttc 376  Q
    |||||||    
T  41915840 ctctttc 41915846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 46033902 - 46033797
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||| |  |||||||||||||||| || |  |||||||||||||||||||||| |||||||| ||||  ||||||||||  |||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  370 ctcttt 375  Q
    ||||||    
T  46033802 ctcttt 46033797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 375
Target Start/End: Complemental strand, 19436295 - 19436183
Alignment:
Q  263 aaagaaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagc 362  Q
    ||||| |||||| |||||||||||||| ||||||||| ||||||| |  | |||||||||| |||||||||||| || |||||||| |||||||| ||||    
T  19436295 aaagacaagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagc 19436196  T
Q  363 gcattttctcttt 375  Q
     || |||||||||    
T  19436195 acactttctcttt 19436183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 38267040 - 38267144
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||| ||| ||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  371 tcttt 375  Q
    |||||    
T  38267140 tcttt 38267144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 270 - 376
Target Start/End: Original strand, 12310905 - 12311009
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||||||||||||||||||||||||||||| |||| ||  ||||| | ||| | |||||||||||||||||||||||| |||| | |||||| ||||||    
T  12310905 agagttatgatacatagacacccttaggtggaaatatat--ctggatatccatacaaaaatctgacatgtggtcacgtggatcctgaacaagcacatttt 12311002  T
Q  370 ctctttc 376  Q
     ||||||    
T  12311003 atctttc 12311009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 269 - 376
Target Start/End: Original strand, 38044195 - 38044302
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||| ||||||||||||||| | ||  || | ||||||||||  || ||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  369 tctctttc 376  Q
    ||||||||    
T  38044295 tctctttc 38044302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 40957704 - 40957811
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    ||||||| ||||||||||||||| ||||||||||||||||  | | || ||||||| |||||||||||| || |||||||| |||||| |||||| || |    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  368 ttctcttt 375  Q
    ||||||||    
T  40957804 ttctcttt 40957811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 7727902 - 7727996
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaag 361  Q
    ||||||||||||||||||| |||||||||||||| |||||| | || ||||  |||||||||||||||||||||||||  || | ||||||||||    
T  7727902 aaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaag 7727996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 41423682 - 41423792
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| | |||| ||| |||||| | || |||||  ||| |||||||||||||||||||||||  |||||| ||||||  ||||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  371 tctttcatctc 381  Q
    |||||||||||    
T  41423782 tctttcatctc 41423792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 19329842 - 19329946
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| ||||||||||||||||| |  | |||||||||| |||||||||||| ||  ||||||| | ||||||||||| || ||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  371 tcttt 375  Q
    |||||    
T  19329942 tcttt 19329946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 35137533 - 35137637
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||| ||||||||||||||||||||||||| || | |||||||||| |||||||| ||| || |||||||| | ||||||||| | || ||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttc 35137632  T
Q  371 tcttt 375  Q
    |||||    
T  35137633 tcttt 35137637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 4999614 - 4999504
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||| |||||||||| |  | |||||||||| |||||||||| | || |||||||| | ||||||||| | || ||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  371 tctttcatctc 381  Q
    ||||| |||||    
T  4999514 tcttttatctc 4999504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 8238212 - 8238318
Alignment:
Q  271 gagttatgatacatagacaccct-taggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||||||||||||| ||||||| |||||||||||||| || | |||||||||| ||||||||||||||| ||||  || | ||||||||||  || |||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacacttt 8238311  T
Q  370 ctctttc 376  Q
    |||||||    
T  8238312 ctctttc 8238318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 32564526 - 32564456
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| |||  |||||||||||||||| |||| |||||||||| |||||||||||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgg 32564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 26296643 - 26296748
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||||| ||||||||| ||||| | || |  ||| |||||||||||||||| | |||| ||  || | ||||||||||||||||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  370 ctcttt 375  Q
    ||||||    
T  26296743 ctcttt 26296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 21234401 - 21234504
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||| ||||||| || | ||||| |||| |||||| ||||| || | ||| || | ||||||||||| |||||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  371 tctt 374  Q
    ||||    
T  21234501 tctt 21234504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 272 - 375
Target Start/End: Original strand, 35522877 - 35522980
Alignment:
Q  272 agttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttct 371  Q
    |||||||||||||||||| ||||| ||||||||||| |  |  ||||||||| |||||||||||| |||| ||  || ||||||||||||| || |||||    
T  35522877 agttatgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttct 35522976  T
Q  372 cttt 375  Q
    ||||    
T  35522977 cttt 35522980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 46374902 - 46374811
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagc 362  Q
    ||||||||||||||||||| ||||||||||||| ||| || |  ||||||||| |||||||||||| |||| ||| || | |||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagc 46374811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 39256023 - 39255914
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| | || || ||||| | |||||||||||| |||| |||||| |  || ||||||  || ||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacactttc 39255925  T
Q  371 tctttcatctc 381  Q
    |||||||||||    
T  39255924 tctttcatctc 39255914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 301 - 382
Target Start/End: Complemental strand, 16374894 - 16374813
Alignment:
Q  301 caatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctct 382  Q
    |||||||||||| |||| ||||| |||||||||||| ||||||||||| ||| | ||||||| ||  |||||||||||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctct 16374813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 332
Target Start/End: Complemental strand, 35468959 - 35468894
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatct 332  Q
    |||||||| |||||||||||||| |||||| ||||||||||||  | |||||||||||||||||||    
T  35468959 aaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatct 35468894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 336
Target Start/End: Complemental strand, 10343666 - 10343598
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    ||||||| ||||||||||||||||||||||||| ||||||   || |||||||||| ||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgaca 10343598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 320
Target Start/End: Original strand, 11044185 - 11044237
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacaccc 320  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 339
Target Start/End: Complemental strand, 40846213 - 40846145
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgt 339  Q
    ||||||||||||||| ||| ||||||||||||||||| |||| |||| ||||| |||||||| ||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgt 40846145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 375
Target Start/End: Original strand, 3694372 - 3694471
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||| ||| ||||||||||||| ||||||| |  |  ||||||||| |||||||||||| || |||| ||| ||||||||||||| || |||||||||    
T  3694372 atgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttt 3694471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 32951588 - 32951489
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    ||||||||||||||| ||||| || |||||||||| |  ||| ||||| |||||||| ||| || |||||||| | ||||||||||| || |||||||||    
T  32951588 atgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttt 32951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 45223038 - 45223152
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||| ||| ||| |||||||||||||||||| | || ||| | ||| |||||||||||| ||  |||  | || | |  ||||||||||    
T  45223038 aaaagagtaatgatatatatacatccttaggtggcaatacattcttgaacatctacacaaaaatctgacacgtaatcatattaacctcatacaagcgcat 45223137  T
Q  367 tttctctttcatctc 381  Q
    |||||||||||||||    
T  45223138 tttctctttcatctc 45223152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 2318338 - 2318233
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||  ||| || |||||||||| ||| | || |||||||||| ||||||||||| |||||||||||| | ||  || ||||  | |||||||||    
T  2318338 atgatacattaacaaccataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctcttt 2318239  T
Q  376 catctc 381  Q
    ||||||    
T  2318238 catctc 2318233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 373
Target Start/End: Complemental strand, 27744363 - 27744307
Alignment:
Q  317 acccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctct 373  Q
    ||||||| ||||||||||||||||| |||||| ||||| || |||| ||||||||||    
T  27744363 acccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 31735884 - 31735920
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaataca 307  Q
    ||||||||||||||||||| |||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaataca 31735920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 32045858 - 32045902
Alignment:
Q  292 cttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    |||||||||||||| ||  ||||||||||||||||||||||||||    
T  32045858 cttaggtggcaatatattactggacacccacataaaaatctgaca 32045902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 7e-31; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 6034044 - 6034148
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| || | |||||||||| ||||||||||||||| |||||||| ||||||||||||| || ||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  371 tcttt 375  Q
    |||||    
T  6034144 tcttt 6034148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 42044471 - 42044363
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| ||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| || |||||||| | ||||||||||| ||     
T  42044471 aaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 42044372  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  42044371 tttctcttt 42044363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 11511562 - 11511458
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| || |||||||| | ||||||||||| || ||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  371 tcttt 375  Q
    |||||    
T  11511462 tcttt 11511458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 50052532 - 50052418
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||| ||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| ||     
T  50052532 aaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 50052433  T
Q  367 tttctctttcatctc 381  Q
    |||||||||| ||||    
T  50052432 tttctctttcctctc 50052418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 266 - 376
Target Start/End: Complemental strand, 19670821 - 19670711
Alignment:
Q  266 gaaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgca 365  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||| ||||| |||| ||||||||||||||||| ||  || | ||||||||||  ||    
T  19670821 gaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 19670722  T
Q  366 ttttctctttc 376  Q
     ||||||||||    
T  19670721 ctttctctttc 19670711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 270 - 376
Target Start/End: Original strand, 47986207 - 47986313
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||  || | ||||||||||  || |||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  370 ctctttc 376  Q
    |||||||    
T  47986307 ctctttc 47986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 48183151 - 48183045
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||| ||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  369 tctcttt 375  Q
    |||||||    
T  48183051 tctcttt 48183045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 270 - 376
Target Start/End: Complemental strand, 50813993 - 50813887
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||| |||| ||||||||| |||||| |||| |||||||||| ||||||||||||||||||||  |||| ||||||||||  || |||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  370 ctctttc 376  Q
    |||||||    
T  50813893 ctctttc 50813887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 480551 - 480443
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||||||||||||| ||||||| || | |||||||||| |||||||||||| || |||||||| | |||| |||||| ||     
T  480551 aaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 480452  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  480451 tttctcttt 480443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 29548061 - 29547989
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtgg 29547989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 24995209 - 24995103
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||| || ||||||||||| |||||||||| || | ||||||||||||||||| ||||| || |||||||| | ||||||||||| |||||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  369 tctcttt 375  Q
    |||||||    
T  24995109 tctcttt 24995103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 41236347 - 41236451
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| |  | |||| ||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  371 tcttt 375  Q
    |||||    
T  41236447 tcttt 41236451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 271 - 362
Target Start/End: Complemental strand, 50526271 - 50526180
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagc 362  Q
    |||| |||||||||||||| | ||||||||||||||| || | |||||||||| |||||||||||| ||||||||||| || ||||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagc 50526180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 8343263 - 8343193
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| ||| |||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtgg 8343193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 268 - 381
Target Start/End: Original strand, 29239883 - 29239996
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    ||||||| |||||||||||||||||||||||||||||||| |  | |||| ||||| |||||||| ||| || |||||||| | ||| ||||||| || |    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  368 ttctctttcatctc 381  Q
    ||||||||| ||||    
T  29239983 ttctctttcctctc 29239996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 32766956 - 32767028
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||||| |||| |||||||||||||||| |||| |||||||| | |||||||||||||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtgg 32767028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 269 - 341
Target Start/End: Original strand, 55475189 - 55475261
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||||| ||| ||||||||||||||||| || | |||||||||| |||||||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtgg 55475261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 55079814 - 55079744
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| ||||||||||||||||||||| | || |||||||| | |||||||||||||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtgg 55079744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 3481654 - 3481759
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||| |||||||||||||||  | | |||||||||| ||||||||||||  | |||||||| | ||| ||||||| || ||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  371 tctttc 376  Q
    ||||||    
T  3481754 tctttc 3481759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 29234346 - 29234241
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| ||||||||||||||||||||| |||||||||| || | || |||  || |||||||||||| || |||||||| | ||||||||||| || |||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  370 ctcttt 375  Q
    ||||||    
T  29234246 ctcttt 29234241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 381
Target Start/End: Original strand, 23608233 - 23608345
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||| |||||||||||||| || ||||||| |  | |||||||||| |||||||||||| || ||||||||||  || ||||||| || ||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  369 tctctttcatctc 381  Q
    ||||||| |||||    
T  23608333 tctcttttatctc 23608345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 48647828 - 48647716
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||| ||||| ||| ||||||||  ||||||| | ||  |||||||||||||||||| ||| ||||||||||| |  |||||||||| || ||    
T  48647828 aagagttatgacacataaacatccttaggtaacaatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatt 48647729  T
Q  369 tctctttcatctc 381  Q
    |||||||| ||||    
T  48647728 tctctttcctctc 48647716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 54473633 - 54473529
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||| ||||||| |  | |||||||||| |||||||| ||| || |||||||| | ||||||||||| || |||     
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttta 54473534  T
Q  371 tcttt 375  Q
    |||||    
T  54473533 tcttt 54473529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 289 - 376
Target Start/End: Complemental strand, 17983825 - 17983738
Alignment:
Q  289 acccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttc 376  Q
    ||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || ||||||||||    
T  17983825 acccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 17983738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 381
Target Start/End: Complemental strand, 18769103 - 18769037
Alignment:
Q  315 acacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    ||||||||| |||||||||||||||||||| || |||||| ||||| | ||||||||||||||||||    
T  18769103 acacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctc 18769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 344
Target Start/End: Complemental strand, 44536846 - 44536773
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtca 344  Q
    |||||||||||||||| ||||  ||||||||||||||| |||| |||| ||||| ||||||||||||||||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaataca-cccttgacatccacacaaaaatctgacatgtggtca 44536773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 336
Target Start/End: Original strand, 40574779 - 40574844
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    ||||||||||||||||||| |||||||||| |||||| || | |||||||||| ||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgaca 40574844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 31910192 - 31910296
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||| |||||||  | | |||||||||| ||||||||||||  | | ||| || | ||||||||||| || ||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  371 tcttt 375  Q
    |||||    
T  31910292 tcttt 31910296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 269 - 380
Target Start/End: Original strand, 29977883 - 29977994
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||| | | || |||||||||||||| ||||  ||||||||| |||||||||||| || ||||  || | ||| ||||||| || ||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  369 tctctttcatct 380  Q
    ||||||||||||    
T  29977983 tctctttcatct 29977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 18924595 - 18924525
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    |||||||||| |||| | ||||||||||||||||||| |||| || | ||||| |||||||||||||||||    
T  18924595 gagttatgatccataaatacccttaggtggcaatacaccccttgatatccacacaaaaatctgacatgtgg 18924525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 28480369 - 28480258
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||| ||||||||||| ||||||||| |||||||   ||  |||| |||| ||||||||||||||| |||| ||| | ||| ||||| | || |||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  370 ctctttcatctc 381  Q
    ||| ||||||||    
T  28480269 ctccttcatctc 28480258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 28481244 - 28481133
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||| ||||||||||| ||||||||| |||||||   ||  |||| |||| ||||||||||||||| |||| ||| | ||| ||||| | || |||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  370 ctctttcatctc 381  Q
    ||| ||||||||    
T  28481144 ctccttcatctc 28481133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 28482119 - 28482008
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||| ||||||||||| ||||||||| |||||||   ||  |||| |||| ||||||||||||||| |||| ||| | ||| ||||| | || |||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  370 ctctttcatctc 381  Q
    ||| ||||||||    
T  28482019 ctccttcatctc 28482008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 375
Target Start/End: Complemental strand, 53352661 - 53352562
Alignment:
Q  275 tatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctt 374  Q
    |||||||||||||||||||||||| ||||||||| | |  ||||| ||| |||||||||||| || || | ||| | |||||||||||  | ||||||||    
T  53352661 tatgatacatagacacccttaggt-gcaatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctctt 53352563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 382
Target Start/End: Original strand, 29535377 - 29535487
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||||||||||||||||||  |||||||| ||||||||| || |  | ||||| |||||| || ||  ||| |||||| ||||| ||||| | || ||||    
T  29535377 gagttatgatacatagacaatcttaggtgacaatacatctcttggtatccacacaaaaatatg-cacatggccacgtggatcccacacaaacacactttc 29535475  T
Q  371 tctttcatctct 382  Q
    ||||||||||||    
T  29535476 tctttcatctct 29535487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 314 - 381
Target Start/End: Complemental strand, 56300222 - 56300155
Alignment:
Q  314 gacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    |||| ||||| ||||||||||||||||||||  ||||||| |||||| | || |||||||||| ||||    
T  56300222 gacatccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctc 56300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 18769153 - 18769219
Alignment:
Q  315 acacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    ||||||||| |||||||||||| ||||||| || || ||| |||||   ||||||||||||||||||    
T  18769153 acacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttcatctc 18769219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 375
Target Start/End: Original strand, 41823926 - 41823986
Alignment:
Q  315 acacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    ||||||||| |||||||||||| || ||||| || | ||||||||||| || |||||||||    
T  41823926 acacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttt 41823986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 274 - 381
Target Start/End: Original strand, 26754698 - 26754805
Alignment:
Q  274 ttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctct 373  Q
    ||||||| |||||||||||||||||||||||||| || |||||| ||||| ||||||||||||||||||||| || | ||||||||||| ||||||||||    
T  26754698 ttatgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T
Q  374 ttcatctc 381  Q
    ||| ||||    
T  26754798 ttcctctc 26754805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 49607410 - 49607518
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| ||||| ||||||| ||     
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  49607510 tttctcttt 49607518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 269 - 375
Target Start/End: Original strand, 11907369 - 11907475
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||||||||||||||||| |||||||  |||| |||| |||| ||||||||||||||||||||  || | ||||||||||| |||||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  369 tctcttt 375  Q
    |||||||    
T  11907469 tctcttt 11907475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 271 - 380
Target Start/End: Complemental strand, 14623939 - 14623830
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||| | | | ||||||| || ||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  371 tctttcatct 380  Q
    ||||||||||    
T  14623839 tctttcatct 14623830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 53982011 - 53982115
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  371 tcttt 375  Q
    |||||    
T  53982111 tcttt 53982115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 33644200 - 33644304
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||| |||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  371 tcttt 375  Q
    |||||    
T  33644300 tcttt 33644304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 375
Target Start/End: Original strand, 52629304 - 52629404
Alignment:
Q  275 tatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctt 374  Q
    ||||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | |||| |||||| || ||||||||    
T  52629304 tatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctctt 52629403  T
Q  375 t 375  Q
    |    
T  52629404 t 52629404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 48375807 - 48375696
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||||||||| |||||||||||||||||| ||||||| ||||| | | ||| | ||||||||||| ||||||||| || | ||||||||||| ||||||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacatttt 48375708  T
Q  370 ctctttcatctc 381  Q
    ||||||| ||||    
T  48375707 ctctttcctctc 48375696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 48587186 - 48587087
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||| ||||||||||||||||||| || | |||||| |||||||||||||||| || |||||||| ||||||||||||  || |||||||||    
T  48587186 atgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctcttt 48587087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 41189866 - 41189760
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| ||| |||||||||||||||||||  | ||||||||||||||||| ||||| |||| ||| || | ||||||||||| || ||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  369 tctcttt 375  Q
    |||||||    
T  41189766 tctcttt 41189760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 45058652 - 45058584
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtg 340  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaataca-cccttgacacccacataaaaatctgacatgtg 45058584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 26141632 - 26141528
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| || |  ||||||||| |||||||||||| |||||||| || | ||| ||||||| || ||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  371 tcttt 375  Q
    |||||    
T  26141532 tcttt 26141528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 33118953 - 33118841
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||||||||||||||||| ||||||| || | |||||||||| |||||| ||||| || |||||||| ||||| || || | || ||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  369 tctctttcatctc 381  Q
    |||||||| ||||    
T  33118853 tctctttcctctc 33118841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 8076393 - 8076503
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||| |||||||||||||||| |||| || | |||||||||| |||||||| ||| || |||||||| | ||||||||||| || ||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  371 tctttcatctc 381  Q
    |||||| ||||    
T  8076493 tctttcctctc 8076503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 347
Target Start/End: Complemental strand, 11095455 - 11095377
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgt 347  Q
    |||||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 54868997 - 54868891
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||||||||||||||| |  | |||||||||| |||||||||||| || || ||||| | ||||||||| | || ||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  369 tctcttt 375  Q
    |||||||    
T  54868897 tctcttt 54868891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 269 - 374
Target Start/End: Complemental strand, 27714993 - 27714888
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||| |||||||| |||||| || | |||||||||| |||||||||||| || |||| ||| | ||||||||||| || ||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  369 tctctt 374  Q
    ||||||    
T  27714893 tctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 11348026 - 11347918
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||||||| ||||||||| |||||||||| | |||| ||||| |||||||||||| |||| ||| || | || ||| |||| ||     
T  11348026 aaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacac 11347927  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  11347926 tttctcttt 11347918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 13898150 - 13898046
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||| ||| ||| ||||||||||||||||| |||| ||||||||||||||||||||||| ||| ||| ||| | | | ||||||| || |||||||||    
T  13898150 atgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctcttt 13898051  T
Q  376 catct 380  Q
    |||||    
T  13898050 catct 13898046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 31456685 - 31456793
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||| ||| ||||||||||||||||| |||| ||||||||| || | |||||||||| |||||||||||| || |||| ||| | ||||||||||| ||     
T  31456685 aaaaaagtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacac 31456784  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  31456785 tttctcttt 31456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 17470404 - 17470509
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||||| ||||||||||||||| |  |  ||||||||| |||||||||||| || |||||||| | ||| ||||||| || |||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  370 ctcttt 375  Q
    ||||||    
T  17470504 ctcttt 17470509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 51419460 - 51419356
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| |||||| || |||||||||| |  ||||||||| |||||||||||| |||| ||| |  | ||||||||||| || ||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  371 tcttt 375  Q
    |||||    
T  51419360 tcttt 51419356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 269 - 381
Target Start/End: Complemental strand, 1758560 - 1758446
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccc--tggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||||||||||||| || || ||||| |||||||| |||  | |||||||||| ||||||||||||| |||| ||||| |  || ||||| | |||    
T  1758560 aagagttatgatacatagtcaaccataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacat 1758461  T
Q  367 tttctctttcatctc 381  Q
    |||||||||||||||    
T  1758460 tttctctttcatctc 1758446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 8956761 - 8956827
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    ||||| |||||||||||||| ||||| |||||||||||||| | ||||||||||||||||| |||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgaca 8956827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 30801828 - 30801723
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    ||||||||||||||||||||||||  |||||| || | || ||||||| |||||| |||||||| ||||  || | ||| ||||||| ||||||||||||    
T  30801828 atgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctcttt 30801729  T
Q  376 catctc 381  Q
    | ||||    
T  30801728 cctctc 30801723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 270 - 342
Target Start/End: Complemental strand, 36331479 - 36331407
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggt 342  Q
    |||||||||||||||| |||||||||| ||||||| || |||| |||| ||||| ||||||||| ||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctggcatgtggt 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 356
Target Start/End: Complemental strand, 36707527 - 36707439
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgc 356  Q
    ||||||| |||||||||||| ||||||||||| ||||||| || | |||| ||||| |||||||||||| || || ||||| |||||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 24700055 - 24699944
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||| |||||| |||||||||| |  | |||||||||||||||||||| || |||| |||||| | || | |||| | || |||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  370 ctctttcatctc 381  Q
    ||||||| ||||    
T  24699955 ctctttcctctc 24699944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 35536625 - 35536699
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtca 344  Q
    ||||| |||||||||||||| ||||| ||||||||||| |  | ||||||||||||||||| ||||| |||||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtca 35536699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 41080709 - 41080817
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| |||||| | |||| ||| || | |||||||||  |||||||||| ||||||||| ||| | ||| ||||||| |||||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  371 tctttcatctc 381  Q
    |||||||||||    
T  41080807 tctttcatctc 41080817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 274 - 344
Target Start/End: Original strand, 42823114 - 42823184
Alignment:
Q  274 ttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtca 344  Q
    |||||||||||| ||||| ||| |||| |||||| |||| |||||||||| |||||| |||||||||||||    
T  42823114 ttatgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtca 42823184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 21746284 - 21746216
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggaca--cccacataaaaatctgaca 336  Q
    ||||| |||||||||| ||| |||||||||||||||||| ||||||||  |||||| ||||||||||||    
T  21746284 agagtaatgatacatatacatccttaggtggcaatacattcctggacacccccacacaaaaatctgaca 21746216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 20765015 - 20764911
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||| ||||||||| |||||||||| ||||||  | |  ||||||||| |||||||||||| |||| ||| || | |||| |||||| || ||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  371 tcttt 375  Q
    |||||    
T  20764915 tcttt 20764911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 269 - 341
Target Start/End: Complemental strand, 35965876 - 35965804
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    |||||| |||||||||| ||| ||||| |||  ||||||||| | ||||||||||||||||||||||| ||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgtgg 35965804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 47531865 - 47531969
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| |||||| |||||||||| |  |  ||| ||||| || ||||||||| |||| ||  |||| ||||||||||| || ||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  371 tcttt 375  Q
    |||||    
T  47531965 tcttt 47531969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 373
Target Start/End: Original strand, 9562998 - 9563101
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||| ||||| |||| || ||||||| || | |||| ||| |||||||||||||| || |||||||| |||| |||||| | || |||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T
Q  370 ctct 373  Q
    ||||    
T  9563098 ctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 25395434 - 25395363
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    |||| ||||||||||| ||| ||||| ||||| ||||||||||  | ||||||| |||||||||||||||||    
T  25395434 agagctatgatacataaacatccttatgtggccatacatcccttaatacccacacaaaaatctgacatgtgg 25395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 269 - 380
Target Start/End: Original strand, 35093583 - 35093694
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||||| |||||||||||| | ||||||| ||||||| |  | |||| ||||  |||||||||||||||||||| |||||  ||  |||||| || ||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  369 tctctttcatct 380  Q
    |||||| |||||    
T  35093683 tctcttgcatct 35093694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 36331407 - 36331324
Alignment:
Q  293 ttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttc 376  Q
    |||||||||||| || |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || ||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttc 36331324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 381
Target Start/End: Complemental strand, 25407243 - 25407137
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccaca-taaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctt 374  Q
    |||||||||| ||| || |||||||||||| | |||| ||||| ||||  |||||||||||| ||| |||  || ||||| ||||| | || ||||||||    
T  25407243 atgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctt 25407144  T
Q  375 tcatctc 381  Q
    |||||||    
T  25407143 tcatctc 25407137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 7e-28; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 263 - 374
Target Start/End: Original strand, 13811644 - 13811755
Alignment:
Q  263 aaagaaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagc 362  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||| || |||||||| | |||||||||||    
T  13811644 aaagaaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagc 13811743  T
Q  363 gcattttctctt 374  Q
     || ||||||||    
T  13811744 acactttctctt 13811755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 381
Target Start/End: Complemental strand, 18520988 - 18520874
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||| | |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| ||     
T  18520988 aaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 18520889  T
Q  367 tttctctttcatctc 381  Q
    ||||||||| |||||    
T  18520888 tttctcttttatctc 18520874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 35943992 - 35943882
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||| || || ||||| ||||| ||||||| || ||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  371 tctttcatctc 381  Q
    |||||| ||||    
T  35943892 tctttcctctc 35943882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 2740273 - 2740378
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||| ||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| ||||||||||||| || |||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  370 ctcttt 375  Q
    ||||||    
T  2740373 ctcttt 2740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 268 - 376
Target Start/End: Complemental strand, 3921368 - 3921260
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || |    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  368 ttctctttc 376  Q
    |||||||||    
T  3921268 ttctctttc 3921260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 271 - 371
Target Start/End: Original strand, 14831814 - 14831914
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||| |||||||||||||||| || | ||||||||||||||||||||||| || |||||||| ||||||||||||| || ||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 14831913  T
Q  371 t 371  Q
    |    
T  14831914 t 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 376
Target Start/End: Complemental strand, 39688999 - 39688892
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||||||| |||||||||  |||| |||||| |||  || ||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  369 tctctttc 376  Q
    ||||||||    
T  39688899 tctctttc 39688892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 28177775 - 28177879
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| || | |||||||||| |||||||||||| |||||||| || | ||||||||| | || ||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  371 tcttt 375  Q
    |||||    
T  28177875 tcttt 28177879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 33149738 - 33149634
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||||||| |||||| || | |||||||||| |||||| ||||| || |||||||| ||||||||||||| || ||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  371 tcttt 375  Q
    |||||    
T  33149638 tcttt 33149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 265 - 376
Target Start/End: Original strand, 31008982 - 31009093
Alignment:
Q  265 agaaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgc 364  Q
    ||||||||||||||||||||| ||| ||||||||| |||||||| | |  ||||||||| |||||||||||| || |||||||| ||||||||||||| |    
T  31008982 agaaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcac 31009081  T
Q  365 attttctctttc 376  Q
    | ||||| ||||    
T  31009082 actttctatttc 31009093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 270 - 376
Target Start/End: Complemental strand, 2252269 - 2252163
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||| ||| ||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || |||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  370 ctctttc 376  Q
    |||||||    
T  2252169 ctctttc 2252163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 36733044 - 36732938
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| ||||||||||||||||||||||| |||||||| || | |||||||||| ||||||||||||  | |||||||| | ||||||||||| || ||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  369 tctcttt 375  Q
    |||||||    
T  36732944 tctcttt 36732938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 6679697 - 6679802
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||||| | ||||||||||||||| |  | |||||||||| |||||||||||| |||||||| || | ||||||||| | ||||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  370 ctcttt 375  Q
    ||||||    
T  6679797 ctcttt 6679802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 26720516 - 26720620
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| || |  ||||| ||| |||||||||||| |||| ||| || ||||||||||||| || ||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  371 tcttt 375  Q
    |||||    
T  26720616 tcttt 26720620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 26990265 - 26990369
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||| ||||||||||||||||| || |  ||||| ||| |||||||||||| |||| ||| || ||||||||||||| || ||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  371 tcttt 375  Q
    |||||    
T  26990365 tcttt 26990369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 35785199 - 35785303
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| |  | |||||||||| |||||||||||| || || ||||| ||||||||||| | || ||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  371 tcttt 375  Q
    |||||    
T  35785299 tcttt 35785303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 40145407 - 40145511
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| || |  ||| ||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  371 tcttt 375  Q
    |||||    
T  40145507 tcttt 40145511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 15409712 - 15409606
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||||||| ||||||||| |||||||| | | |||||||||| |||||||||||| || | ||| || | ||||||||||| || |     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  369 tctcttt 375  Q
    |||||||    
T  15409612 tctcttt 15409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 42414402 - 42414298
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||  |||||||||||||| || | |||||||||| |||||||||||| || |||| ||| | ||||||||||| || |||     
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttta 42414303  T
Q  371 tcttt 375  Q
    |||||    
T  42414302 tcttt 42414298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 271 - 380
Target Start/End: Complemental strand, 33825424 - 33825315
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||| ||||||||  ||||||||||||||||  ||| ||||||||||||||||||||||| ||| ||| ||||| |   ||||||| || ||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  371 tctttcatct 380  Q
    ||||| ||||    
T  33825324 tcttttatct 33825315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 275 - 334
Target Start/End: Original strand, 10356638 - 10356698
Alignment:
Q  275 tatgatacatagacacccttaggtggcaatacatccc-tggacacccacataaaaatctga 334  Q
    ||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||||||||    
T  10356638 tatgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 16327921 - 16328008
Alignment:
Q  291 ccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcat 378  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||| ||| ||| | | | ||||||| || ||| ||||||||    
T  16327921 ccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttcat 16328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 36875707 - 36875644
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaat 330  Q
    |||| ||| |||||||||||||||||||||||||||||||| || | |||||||||| ||||||    
T  36875707 aaaaaagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 21370048 - 21370114
Alignment:
Q  315 acacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    ||||||||  |||||||||||||||||||||||| | ||||||||| | ||||||||||||| ||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctc 21370114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 362
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagc 362  Q
    ||||| || ||||||||||||| |||||||||||||||||| |  | |  || |||||||||||||| || |||||||| | |||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 289 - 340
Target Start/End: Complemental strand, 10227976 - 10227925
Alignment:
Q  289 acccttaggtggcaatacatccctggacacccacataaaaatctgacatgtg 340  Q
    ||||||| |||||||||||||||| |||||| | | ||||||||||||||||    
T  10227976 acccttatgtggcaatacatcccttgacaccgatacaaaaatctgacatgtg 10227925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 268 - 381
Target Start/End: Original strand, 38296200 - 38296313
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    |||||||||||||||||||||   |||||||| ||||||| | ||  | ||||||| ||||||| |||| || |  ||||| ||||  ||||||| || |    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T
Q  368 ttctctttcatctc 381  Q
    ||||| ||||||||    
T  38296300 ttctcattcatctc 38296313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 10213 - 10105
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||||||||| |||||||||||||||||| | |||| |||||||||||||||||| || |||||||| | | || |||||| ||     
T  10213 aaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacac 10114  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  10113 tttctcttt 10105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 4e-26; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 11427615 - 11427722
Alignment:
Q  270 agagttatgatacatagacaccct--taggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    ||||| ||||||||||||||||||  ||||||||||||||||| | |||||||||| |||||||||||| || |||||||| ||||||||||||| || |    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  368 ttctcttt 375  Q
    ||||||||    
T  11427715 ttctcttt 11427722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 17598554 - 17598658
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||| || |||||||| | ||||||||||| || ||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttc 17598653  T
Q  371 tcttt 375  Q
    |||||    
T  17598654 tcttt 17598658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 268 - 376
Target Start/End: Complemental strand, 30341463 - 30341355
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || |    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  368 ttctctttc 376  Q
    |||||||||    
T  30341363 ttctctttc 30341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 269 - 376
Target Start/End: Complemental strand, 15990144 - 15990037
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || ||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  369 tctctttc 376  Q
    ||||||||    
T  15990044 tctctttc 15990037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 15508124 - 15508019
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || ||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  371 tctttc 376  Q
    ||||||    
T  15508024 tctttc 15508019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 31976247 - 31976352
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||||| ||||||||||||||| | || |  ||||||||| |||||||||||| |||||||| |||| ||||||||||| || |||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  370 ctcttt 375  Q
    ||||||    
T  31976347 ctcttt 31976352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 278 - 375
Target Start/End: Original strand, 32869685 - 32869782
Alignment:
Q  278 gatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || |||||||||    
T  32869685 gatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 32869782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 22880753 - 22880654
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||||||||||||||||||||||| || | |||||||||| |||| ||||||| || |||||||| | ||||||||||| || |||||||||    
T  22880753 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 22880654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 271 - 380
Target Start/End: Complemental strand, 31953130 - 31953021
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||| ||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||| | | | ||||| | || ||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  371 tctttcatct 380  Q
    ||||||||||    
T  31953030 tctttcatct 31953021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 380
Target Start/End: Complemental strand, 9379808 - 9379703
Alignment:
Q  275 tatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctt 374  Q
    ||||||||||||||| |||||| || |||||||||||| |||||||| | |||||| ||||| |||| || ||| ||| | ||||| | |||||||||||    
T  9379808 tatgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctt 9379709  T
Q  375 tcatct 380  Q
    ||||||    
T  9379708 tcatct 9379703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 15832573 - 15832681
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||||||||| ||||||| ||||| |||  | |||||||||| |||||| ||||| || |||||||| |||| ||||||   |||    
T  15832573 aaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacat 15832672  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  15832673 tttctcttt 15832681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 23128231 - 23128123
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||| | |||||| ||||||||| ||| |||  ||||||||| | |||||||||| |||||||||||| || |||||||| ||||| ||||||| ||     
T  23128231 aaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 23128132  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  23128131 tttctcttt 23128123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 375
Target Start/End: Complemental strand, 6209568 - 6209461
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    ||||||| ||||||||||||||||||||||||||||||||    | ||||| |||| ||||||||| || || |||||||| | ||||||| ||| || |    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  368 ttctcttt 375  Q
    ||||||||    
T  6209468 ttctcttt 6209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 381
Target Start/End: Original strand, 12732478 - 12732592
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| ||||||||||||||  |||| ||||||||| |  | | |||||||||| |||||||||||| ||||  | ||| ||||| || |||| |||    
T  12732478 aaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcacat 12732577  T
Q  367 tttctctttcatctc 381  Q
    |||||||||||||||    
T  12732578 tttctctttcatctc 12732592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 380
Target Start/End: Complemental strand, 28536581 - 28536479
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||| ||| ||||||||||||||||| |||| |||||||||| ||||||||||||   ||||| ||| | ||| ||||||| || |||||||||    
T  28536581 atgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgaca--cggtcatgtggaccccacacaagcacactttctcttt 28536484  T
Q  376 catct 380  Q
     ||||    
T  28536483 tatct 28536479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 29857827 - 29857931
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||| |||| |||||||||| |  |  ||||||||| |||||||||||| || || ||||| |||||||| |||| || ||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  371 tcttt 375  Q
    |||||    
T  29857927 tcttt 29857931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 315 - 381
Target Start/End: Original strand, 30870058 - 30870124
Alignment:
Q  315 acacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctctttcatctc 381  Q
    ||||||| |||||||||| |||||||||||| || | ||||||||||| ||||||||||||| ||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctc 30870124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 336
Target Start/End: Complemental strand, 31110863 - 31110796
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    ||||||||||||||||||||||| ||||||||||||||||| || | ||||| |||  ||||||||||||    
T  31110863 aaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgaca 31110796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 4231548 - 4231653
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||||||||| |||| ||| | ||||||||||||||| |||| | |||||||| |||||||||||| |||| ||  || | ||||||||||  || ||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  371 tctttc 376  Q
    ||||||    
T  4231648 tctttc 4231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 283 - 347
Target Start/End: Complemental strand, 31109488 - 31109424
Alignment:
Q  283 atagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgt 347  Q
    ||||||||||||||||||||||||| || | |||| ||||| |||||||||||| || |||||||    
T  31109488 atagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgt 31109424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 22422119 - 22422052
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacat 337  Q
    ||||| |||||||||||||| ||||||||||||||| ||| || ||||| || | |||| ||||||||    
T  22422119 agagtaatgatacatagacatccttaggtggcaatagatctcttgacactcatacaaaattctgacat 22422052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 375
Target Start/End: Original strand, 946383 - 946480
Alignment:
Q  278 gatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||| |||||||||  |||||| || | |||||| ||  ||||||||||||  | ||||||| |||||||| | ||| || |||||||||    
T  946383 gatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttt 946480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 371
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    ||||||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||||| || |    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  368 ttct 371  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 268 - 375
Target Start/End: Original strand, 32813244 - 32813351
Alignment:
Q  268 aaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatt 367  Q
    |||||||||||||||||||||| ||||||||||||||||| || |  ||||||||| |||||||||||| |||||||| || | ||||||||||| || |    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  368 ttctcttt 375  Q
    ||||||||    
T  32813344 ttctcttt 32813351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 271 - 381
Target Start/End: Original strand, 6260870 - 6260980
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||| ||||| | |||||||||| |||||| ||||| |||||||||||||||||| ||||||||||||||| | |||||| |||| |||||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  371 tctttcatctc 381  Q
    | |||| ||||    
T  6260970 tatttcttctc 6260980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 267 - 376
Target Start/End: Complemental strand, 5959104 - 5958995
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    ||||||||||||||||||| ||||||||| ||||||||||| | || |||||||||| ||||||||||||||||||||  || | ||||||||||  ||     
T  5959104 aaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacac 5959005  T
Q  367 tttctctttc 376  Q
    ||||||||||    
T  5959004 tttctctttc 5958995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 44453980 - 44454089
Alignment:
Q  272 agttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttct 371  Q
    |||||||||||||||||||| ||| ||||||||||||| || || ||||||| |||||||||||||||||| ||||| ||||| ||||||| || ||| |    
T  44453980 agttatgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttttt 44454079  T
Q  372 ctttcatctc 381  Q
    ||||| ||||    
T  44454080 ctttcctctc 44454089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 271 - 376
Target Start/End: Complemental strand, 50591100 - 50590995
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||| ||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||  || | ||||||||||  || ||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  371 tctttc 376  Q
    ||||||    
T  50591000 tctttc 50590995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 9474976 - 9474872
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | ||||||||| | || ||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  371 tcttt 375  Q
    |||||    
T  9474876 tcttt 9474872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 47452420 - 47452316
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||||||||||||| |||||| || | |||||||||| |||||||| ||| || |||||||| ||||||||||||| || ||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  371 tcttt 375  Q
    |||||    
T  47452320 tcttt 47452316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 51898784 - 51898673
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||| | ||||||||||||||| || | |||||||||| |||||||||||| || |||||||| ||||||||||||| || |||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  370 ctctttcatctc 381  Q
    || |||| ||||    
T  51898684 ctatttcctctc 51898673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 50630457 - 50630562
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||| |||||||||||||||||||||| | |  ||||||| |||||||||||| || |||||||| | ||||||||||| || |||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  370 ctcttt 375  Q
    ||||||    
T  50630557 ctcttt 50630562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 3000319 - 3000423
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||| ||||||||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | |||| |||||| || ||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  371 tcttt 375  Q
    |||||    
T  3000419 tcttt 3000423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 37649198 - 37649302
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| | |||||||||||||||  | | |||||||||| |||||||||||| |||||||||||||| |||||||||| || ||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T
Q  371 tcttt 375  Q
     ||||    
T  37649298 ccttt 37649302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 267 - 375
Target Start/End: Original strand, 38595150 - 38595258
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| |||||||||| ||||| ||||||||||||||| || | |||||||||| |||||||||||| || |||||||| | |||| |||||| ||     
T  38595150 aaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacac 38595249  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  38595250 tttctcttt 38595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 361
Target Start/End: Original strand, 47748443 - 47748532
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaag 361  Q
    ||||||||||||||| | ||||||||||||||||||| |||| |||||||| ||||||||||||||||||| ||  || ||||||||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaataca-cccttgacacccatataaaaatctgacatgtggccatatggatcccgcacaag 47748532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 371
Target Start/End: Original strand, 48489308 - 48489400
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    ||||||||||||||||||||       |||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||    
T  48489308 gagttatgatacatagacac-------tggcaataca-ccctggacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttc 48489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 267 - 375
Target Start/End: Complemental strand, 8346492 - 8346384
Alignment:
Q  267 aaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcat 366  Q
    |||||||| ||||||||||| |||| ||||||||||||||| |  | |||||||||| |||||||||||| || |||||||| | || |||||||| ||     
T  8346492 aaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacac 8346393  T
Q  367 tttctcttt 375  Q
    |||||||||    
T  8346392 tttctcttt 8346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 27564835 - 27564731
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| ||||||||||||||||| |  | |||||||||| |||||||||||| ||  ||||||| | ||||||||||| || ||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  371 tcttt 375  Q
    |||||    
T  27564735 tcttt 27564731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 271 - 375
Target Start/End: Complemental strand, 48716382 - 48716278
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||||||||||||||||||| |  | |||| ||||| |||||||||||| || |||||||| | ||||||||||| || |||     
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttta 48716283  T
Q  371 tcttt 375  Q
    |||||    
T  48716282 tcttt 48716278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 38632423 - 38632317
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    |||||| |||||||||||||||||||||||||||||||| |  |  ||| ||||| |||||||||||| || |||||||| | ||||||||||| || ||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  369 tctcttt 375  Q
    | |||||    
T  38632323 tttcttt 38632317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 271 - 341
Target Start/End: Complemental strand, 41608593 - 41608523
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| ||| ||||||||||||||||| |||| ||||| |||| |||||||||||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtgg 41608523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 375
Target Start/End: Complemental strand, 37926539 - 37926434
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    |||||||||||||||||| | | |||||||||||||||||  |  |||||||||||||||||||||| |||| ||| || |||||| |||||  || |||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  370 ctcttt 375  Q
    ||||||    
T  37926439 ctcttt 37926434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 43132 - 43236
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| ||||||||||||||  |||||| | |||||||||| | |||||||||| |||||||||||| || |||||||| |  |||||||||| || ||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  371 tcttt 375  Q
    |||||    
T  43232 tcttt 43236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 276 - 375
Target Start/End: Complemental strand, 44548471 - 44548372
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    |||||||||||||| | ||||||||||||||| |  | || ||||||| |||||||||||| || |||||||| | ||||||||||| || |||||||||    
T  44548471 atgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttt 44548372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 276 - 361
Target Start/End: Original strand, 26274437 - 26274522
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaag 361  Q
    |||||||||||||||||||| |||||||||||||  | |||| ||||| ||||||||||||  | |||||||| |||| |||||||    
T  26274437 atgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaag 26274522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 263 - 347
Target Start/End: Complemental strand, 23597199 - 23597115
Alignment:
Q  263 aaagaaaagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgt 347  Q
    |||| ||||||| |||||||||||||| | |||||||||||||||  | | || |||||||||||||||||||| |||| |||||    
T  23597199 aaagtaaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgt 23597115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 269 - 375
Target Start/End: Complemental strand, 45044662 - 45044556
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattt 368  Q
    ||||||||||||||||| |   ||||||||||||||||| |  | |||||||| | ||||||||||||||| | ||| || | ||||||||| | |||||    
T  45044662 aagagttatgatacatacatttccttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattt 45044563  T
Q  369 tctcttt 375  Q
    |||||||    
T  45044562 tctcttt 45044556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 3302633 - 3302568
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    |||| |||||||||| ||| ||||||||| ||||| || |||||||||||||| ||||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgaca 3302568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 375
Target Start/End: Original strand, 41758804 - 41758909
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcatttt 369  Q
    ||||| |||||||||||||||| |||  |||||||||| || | |||| ||||| |||||||||||| || ||||| || | ||||||||| | || |||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  370 ctcttt 375  Q
    ||||||    
T  41758904 ctcttt 41758909  T

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Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 26440734 - 26440838
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||||| |||| ||||||| |||||| || ||||||| || |  ||||||||| |||||||||||| |||| ||| || |||||||| |||| || ||||    
T  26440734 gagttaggatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttc 26440833  T
Q  371 tcttt 375  Q
    |||||    
T  26440834 tcttt 26440838  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 7740732 - 7740803
Alignment:
Q  270 agagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||||||||||||| |||| ||||| ||| |||||||||| | |||||| |||||||||| ||||| ||||    
T  7740732 agagttatgatacattgacaaccttatgtgacaatacatccattgacacctacataaaaatatgacacgtgg 7740803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 336
Target Start/End: Complemental strand, 49811629 - 49811562
Alignment:
Q  269 aagagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgaca 336  Q
    ||||||||||||| ||||||| ||||||||| ||||||| |  | |||| ||||| ||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgaca 49811562  T

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Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 11152472 - 11152387
Alignment:
Q  276 atgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagc 362  Q
    |||| ||||||||||| ||||||||||||||| || | |||| ||||| |||||||||||| || |||| ||  | |||||||||||    
T  11152472 atgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagc 11152387  T

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Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 375
Target Start/End: Original strand, 13414791 - 13414865
Alignment:
Q  301 caatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttctcttt 375  Q
    ||||||| || | |||||||||| |||||||| ||| || |||||||| | ||| ||||||| ||||||||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctcttt 13414865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 341
Target Start/End: Complemental strand, 44332441 - 44332401
Alignment:
Q  301 caatacatccctggacacccacataaaaatctgacatgtgg 341  Q
    ||||| ||| || ||||||||||||||||||||||||||||    
T  44332441 caatatatctcttgacacccacataaaaatctgacatgtgg 44332401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 17058 - 17159
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||||||||| ||||||||    ||||| ||||||||||||| |||| ||||| ||||||||||||||||||||| || | ||||||||||| |||||||    
T  17058 gagttatgattcatagaca----taggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttc 17153  T
Q  371 tctttc 376  Q
    ||||||    
T  17154 tctttc 17159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 1029 - 919
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| | ||||||||||||||| || |  ||| ||||| ||||| |||||| || |||||||||||||||||||||| || ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  371 tctttcatctc 381  Q
    |||||| ||||    
T  929 tctttcctctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 381
Target Start/End: Complemental strand, 1029 - 919
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||| | ||||||||||||||| || |  ||| ||||| ||||| |||||| || |||||||||||||||||||||| || ||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  371 tctttcatctc 381  Q
    |||||| ||||    
T  929 tctttcctctc 919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 287 - 360
Target Start/End: Original strand, 152514 - 152587
Alignment:
Q  287 acacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaa 360  Q
    |||||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||  || |||||||||||    
T  152514 acacccttgggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaa 152587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 375
Target Start/End: Original strand, 4029 - 4133
Alignment:
Q  271 gagttatgatacatagacacccttaggtggcaatacatccctggacacccacataaaaatctgacatgtggtcacgtgaatcccgcacaagcgcattttc 370  Q
    |||| |||||||||||||||| |||| |||||||||| |  |  ||||||||| |||||||||||| || || ||||| |||||||| |||| || ||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  371 tcttt 375  Q
    |||||    
T  4129 tcttt 4133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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