View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19702_low_10 (Length: 392)
Name: NF19702_low_10
Description: NF19702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19702_low_10 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
| | |
|
| [»] scaffold0552 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 343; Significance: 0; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 14 - 389
Target Start/End: Complemental strand, 4335350 - 4334983
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335350 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
4335251 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335250 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
4335151 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattatagaaaacttacagataagcataa |
313 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
4335150 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattataga--------atataagcataa |
4335059 |
T |
|
| Q |
314 |
aaagaaaaacagaagcaattgcaacgtgtcaccaaccatgagagtgatgataaaatatttccaaagacacagacat |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4335058 |
aaagaaaaacagaagcaattgcaacgtgtcaccaaccatgagagtgatgataaaatatttccaaagacacagacat |
4334983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 14 - 373
Target Start/End: Original strand, 4124015 - 4124374
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||| ||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
4124015 |
taaacatcccgatagaatgagagttttcagagatttcaacgaataaatgtttcttggaaggttagaaaggctagtacaatctttcaaatttatcaaaaga |
4124114 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4124115 |
actttcttaagatgtccaattgtatgggatacctcagacagccttggacaatctttgagtaccagcttttcaaggttaggcaagtatgaaaagtcagggg |
4124214 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattatagaaaacttacagat-aagcata |
312 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||| | ||| ||||||| |
|
|
| T |
4124215 |
tctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaag-aacagaaatattatagagaacttgcggataaagcata |
4124313 |
T |
|
| Q |
313 |
aaaagaaaaacagaagcaattgcaacgtgtcaccaaccatgagagtgatgataaaatattt |
373 |
Q |
| |
|
|||||| || | ||||| | | ||||||| |||||| |||||||| | ||||||||||| |
|
|
| T |
4124314 |
aaaagagaagtacaagcacgtacgacgtgtcgccaaccttgagagtggtaataaaatattt |
4124374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 16 - 267
Target Start/End: Complemental strand, 4361080 - 4360829
Alignment:
| Q |
16 |
aacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaac |
115 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4361080 |
aacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaat |
4360981 |
T |
|
| Q |
116 |
tttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtc |
215 |
Q |
| |
|
|||||| ||||||||||| | ||||| | |||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||| ||||| ||| |
|
|
| T |
4360980 |
tttcttgagatgtccaatactttgggaaatctcagacagccttggacaatctttaagtactagcttttcaagattaggcaagtatgaaaagtcaggcgtc |
4360881 |
T |
|
| Q |
216 |
tgtgttagataatgagaatgactaagattgagaattttcaactgctccatcc |
267 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4360880 |
tgtgtcagatattgagaatgactaagattgagaattttcagctgctccatcc |
4360829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 4344651 - 4344388
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
4344651 |
taaacatccagatagaatgagagttttcagagatttcaacgtatagatgtttcttggaaggttacaaaggctaatacaatttttcaaatttatcaaaaga |
4344552 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| || ||||||||||| | ||||| | |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||| | |
|
|
| T |
4344551 |
attttgttgagatgtccaatactttgggaaatctcagacagccttggacaatctttgagtactagcttttcaagattaggcaagtatgaaaagtcaggcg |
4344452 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
||||||| ||| ||||||||||||| |||||||||||||||| ||| ||||||||||||||||| |
|
|
| T |
4344451 |
tctgtgtcagacaatgagaatgactgagattgagaattttcagctgatccatcctctgcaagaa |
4344388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 14 - 307
Target Start/End: Original strand, 4320695 - 4320987
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
4320695 |
taaacatcccgatagaatgagagtattcagagttttcaacgtatagatgtttcttggaaggctacaaaggctaatacaatctttcaaatttatcaaaaca |
4320794 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
||||| || ||||||||||| ||||||| |||| ||||||||| || ||||||| ||| ||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
4320795 |
acttttttgagatgtccaatgctatgggaaacctgagacagccttgggcaatcttcgagcactagcttttcaagattaggcaagtatgaaaagtcagggg |
4320894 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattatagaaaacttacagataa |
307 |
Q |
| |
|
||||||| | || |||||||||||||||||| ||||| |||| |||||||||||||||||| ||| | |||||||||||| || |||| ||||| |
|
|
| T |
4320895 |
tctgtgtcaaatgatgagaatgactaagatttagaatcttcagctgctccatcctctgcaa-aaataaaaatattatagagaagttacggataa |
4320987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 4133499 - 4133762
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || ||||| |||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||| | || |||||||||||||| | ||| |
|
|
| T |
4133499 |
taaacagccagaaagaataagagttttcagagatttcaacgaatagatggttcttggaaggttacgaaggctagtacagtctttcaaatttataatgaga |
4133598 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
||||| | ||||| ||||| |||||||| |||||||||||||| |||||||||||||||| ||| ||||| |||||||||| || ||||||||| |||| |
|
|
| T |
4133599 |
actttatggagatgaccaatggtatgggaaacctcagacagccttggacaatctttgagtattagtttttctagattaggcatgtgtgaaaaatctgggg |
4133698 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||| ||| | | ||||| |||||||||||| |
|
|
| T |
4133699 |
tctgtactagacaatgagaatgactaagattgagaaattttagattctccagcctctgcaagaa |
4133762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 6772964 - 6772870
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
253 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| |||||||||||||| || ||||| | || | || ||| |||||||||||||| |||||||| |
|
|
| T |
6772964 |
ggacaattcttgagtactagcttttcaagattcggcaagtatgaaaagtctggggtttcggtcaaatcatgggaatgactaagattaagaatttt |
6772870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 214
Target Start/End: Original strand, 6621585 - 6621783
Alignment:
| Q |
16 |
aacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaac |
115 |
Q |
| |
|
|||||||||| ||||| | ||||| ||||| || || |||||||| |||||||||| |||| ||| | ||||| ||| |||||||||| | |||| |
|
|
| T |
6621585 |
aacatcctgaaagaattaaagtttctagagattttaatttatagatgcttcttggaagtttacgaagacgtatgcagtctgtcaaatttataaggagaag |
6621684 |
T |
|
| Q |
116 |
tttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
||| | ||| |||||| ||||||| || ||||| || ||||| |||||||| ||||| ||||| |||||||||| |||||||||||| ||||| |
|
|
| T |
6621685 |
tttatggagagatccaatgctatgggagactgtagacaaacttggacagtctttgagcactagcttttcgagattaggcatgtatgaaaaatctggggt |
6621783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 88 - 205
Target Start/End: Original strand, 6532382 - 6532499
Alignment:
| Q |
88 |
tgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaag |
187 |
Q |
| |
|
|||| ||| |||||||||||| ||||| ||| | ||| |||||| ||||||| ||| |||||| || ||||| ||||||||||||| |||||||| |
|
|
| T |
6532382 |
tgcagtctgtcaaatttatcagaagaagtttttggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactaacttttcaag |
6532481 |
T |
|
| Q |
188 |
attaggcaagtatgaaaa |
205 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
6532482 |
attaggcatatatgaaaa |
6532499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 6650927 - 6650872
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||||| || ||||| |
|
|
| T |
6650927 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6650872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 6815330 - 6815275
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||||||||| ||| || ||||| |
|
|
| T |
6815330 |
ggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggt |
6815275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 6498747 - 6498841
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
253 |
Q |
| |
|
||||| |||||||||||||| ||||||| |||||||||||| | ||| || ||||| | | | || ||||||||||||||||| |||||||| |
|
|
| T |
6498747 |
ggacagtctttgagtactagcttttcaatattaggcaagtacgtaaagtctggggtttcaatcaaattctgagaatgactaagattaagaatttt |
6498841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 6837194 - 6837040
Alignment:
| Q |
99 |
aaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagt |
198 |
Q |
| |
|
|||||||||| ||||| ||| | ||| |||||| ||||||| ||| |||||| || ||||| |||||||||||||| ||||||||||| |||| | |
|
|
| T |
6837194 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
6837095 |
T |
|
| Q |
199 |
atgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
253 |
Q |
| |
|
|||| || || || || | || | || ||||||||||||||||| |||||||| |
|
|
| T |
6837094 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
6837040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 214
Target Start/End: Complemental strand, 6796789 - 6796592
Alignment:
| Q |
17 |
acatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaact |
116 |
Q |
| |
|
|||||| || ||||| | ||||| ||||| || || ||||||||| |||||||||| || | ||| | ||||| ||| |||||||||| | ||||| | |
|
|
| T |
6796789 |
acatccagaaagaatcaaagtttctagagattttaatgtatagatgcttcttggaagtttccgaagacctatgcagtctgtcaaatttatgagaagaatt |
6796690 |
T |
|
| Q |
117 |
ttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
|| | ||| |||||| ||||||| ||| ||||| || ||||||| ||| |||||||| ||||||||||| || ||||||| ||| || ||||| |
|
|
| T |
6796689 |
ttatgtagagatccaatgctatgggagaccgtagacaaacttggacaattttttagtactagcttttcaagatttggtaagtatgtaaagtctggggt |
6796592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 123; Significance: 4e-63; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 5690248 - 5690498
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||| |||||||||||||| |||||||||| ||||||| ||||||||||| ||||| ||| | |||| |
|
|
| T |
5690248 |
agaatgagagttttcagagatttcaacttatagatgcttcttggaaggttagaaaggctaatacaatcttccaaatttatcagaagaattttgtcgagat |
5690347 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
||||||| ||||||| |||||| || ||| |||||||||||||||| ||| |||||||||||||||| | |||||| || ||||||||||| ||||| |
|
|
| T |
5690348 |
gtccaatgctatgggaaacctcacgcaaccttggacaatctttgagtattagcttttcaagattaggcatgattgaaaagtctggggtctgtgtcagata |
5690447 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
|||||| |||||||||||||||||||| | || ||||||| ||| |||||| |
|
|
| T |
5690448 |
atgagagtgactaagattgagaattttaagcttctccatcatctacaagaa |
5690498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 5128506 - 5128756
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||||| ||| |||||| |||||||| ||||||| ||| |||| |||||||||||||||| ||||||||||| ||||| ||| || |||| |
|
|
| T |
5128506 |
agaatgagagttttcaaagatttcaacttatagatgcttcttgggaggctacataggctaatgcaatcttccaaatttatcagaagaattttattgagat |
5128605 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||| || || || |||||||||| | | | |||||||||||||||||| |||||||||||||| || |||||||| || ||||| ||||| ||| | |
|
|
| T |
5128606 |
gtccgatgctagtagaaacctcagacaacattgaacaatctttgagtactagcttttcaagattaggtaaatatgaaaagtctggggtgtgtgtcagaca |
5128705 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
||||||||||||| ||||||||||||||| || ||||||| |||||||||| |
|
|
| T |
5128706 |
atgagaatgactatgattgagaattttcagcttctccatcatctgcaagaa |
5128756 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 5447592 - 5447329
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||||| ||| |||||| |||||||| ||||||| ||||||| |||| ||| ||||||| ||||||||||| |||| |
|
|
| T |
5447592 |
taaacaaccagaaagaatgagagttttcaaagatttcaacttatagatgcttcttgggaggttacctaggccaatacaatcttccaaatttatcagaaga |
5447493 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| || ||||||||||| || | || |||||||||| | | |||||||||||||||||||| |||||||||||||||||| ||||||| || ||| |
|
|
| T |
5447492 |
attttattgagatgtccaatgctaggagaaacctcagacaacattggacaatctttgagtactagcttttcaagattaggcaagcatgaaaagtccggga |
5447393 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| | ||| ||| |||||||||||||||||||||| |||||| | ||||||||||||||||| |
|
|
| T |
5447392 |
tgtttgtcagacgatgagaatgactaagattgagatttttcagattttccatcctctgcaagaa |
5447329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 5354703 - 5354953
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||||| ||| |||||| | |||||| ||||||| ||| || ||||| ||||||| ||||| |||||||||| ||||| ||| || |||| |
|
|
| T |
5354703 |
agaatgagagttttcaaagatttcaacttgtagatgcttcttgggaggctagaaaggttaatgcagtctttgaaatttatcagaagaattttattgagat |
5354802 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
||||||| | | || || ||||| | | | ||||||||||||||||| || |||||||||||||||| ||| ||||| |||||||| ||||| ||| | |
|
|
| T |
5354803 |
gtccaatgcttggagaaacttcagataacattggacaatctttgagtacaagcttttcaagattaggcatgtaagaaaagtcaggggtatgtgtcagaca |
5354902 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
||| ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
5354903 |
atgtgaatgactaagattgagaattttcagatgctccattctctgcaagaa |
5354953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 27 - 271
Target Start/End: Original strand, 5073997 - 5074241
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||| ||||| |||||| ||||||| ||||||||||| | ||| | ||| ||||||| ||||||||||| ||||| ||| || |||| |
|
|
| T |
5073997 |
agaatgagagtttttagagatttcaacttatagatacttcttggaaggctctgaagaccaatacaatcttccaaatttatcagaagaattttattgagat |
5074096 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|| |||| |||| || ||||| |||| ||| ||||||||| |||||||||| | ||||||||||||||||| ||||||||| || || || || ||||| |
|
|
| T |
5074097 |
gttcaatactatgagaaacctctgacaaccttggacaatctgtgagtactagttgttcaagattaggcaagtttgaaaaatctggagtttgcgtcagata |
5074196 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctg |
271 |
Q |
| |
|
||||||||||||||||||||| ||||||| || ||||| |||||| |
|
|
| T |
5074197 |
atgagaatgactaagattgagtattttcagcttctccaacctctg |
5074241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 27 - 290
Target Start/End: Original strand, 5284478 - 5284740
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
||||||| |||||| ||||| |||||| |||||||| ||| ||| ||| |||| | |||||| ||| ||| |||||||||||| || ||| || |||| |
|
|
| T |
5284478 |
agaatgaaagtttttagagatttcaacttatagatgcttcgtgggaggctacataagctaatacaaccttcaaaatttatcaaagcaattttattgagat |
5284577 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||||| || | || |||||||| ||||| |||||||||||||| ||||| |||||||||||||||| || ||||| |||||| | |||| ||||| |
|
|
| T |
5284578 |
ttccaatgctaggtgaaacctcagatagccttggacaatctttgagcactagcttttcaagattaggcatgttcgaaaagtcagggcttcgtgtgagata |
5284677 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattat |
290 |
Q |
| |
|
||| ||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||||| |
|
|
| T |
5284678 |
atgggaatgactaagattgagaattttcagcttctccatcctctgcaag-aacataaatattat |
5284740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 5176731 - 5176481
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||| ||||||| ||| |||||| ||||||| |||||||||| | ||||||||| ||||||| ||| ||||||| ||||| ||| | |||| |
|
|
| T |
5176731 |
agaatgagtgttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaattttatcgagat |
5176632 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
||||||| ||||||| |||||| || ||| || |||||| |||||| || |||||||||||||||| || |||||| || ||||||| ||| ||||| |
|
|
| T |
5176631 |
gtccaatgctatgggaaacctcacgcaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtctctgtcagata |
5176532 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
|||||||||||||||||| |||||||||| || |||||||||||||||||| |
|
|
| T |
5176531 |
atgagaatgactaagattaagaattttcagcttctccatcctctgcaagaa |
5176481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 14 - 291
Target Start/End: Original strand, 5182003 - 5182279
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || ||||||||||| || | || ||||| |||||||| ||||||||||| | ||||||||||||||||| ||||||||||||||| |
|
|
| T |
5182003 |
taaacacccagaaagaatgagagtgtttaatgatttcaaattatagatgcttcttggaaggctttgaaggctaatgcaatcttccaaatttatcaaaagt |
5182102 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| || |||| |||||| | ||||| || ||||||| | ||||||||||| ||||||||| | |||||| |||||||||| |||||| || || | |
|
|
| T |
5182103 |
attttattgagatctccaatactttgggaaacttcagacaacttcggacaatctgtgagtactaactgttcaaggttaggcaagtttgaaaagtctggag |
5182202 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattata |
291 |
Q |
| |
|
||| || ||| |||||||||||||||||||||||||||||| || ||||| |||||||||| ||||||||| ||||| |
|
|
| T |
5182203 |
tctttgacagaaaatgagaatgactaagattgagaattttcagcttctccagcctctgcaag-aacagaaatgttata |
5182279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 5066783 - 5067033
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||| ||||| |||||| |||||||| ||||||||||||||| |||||||| ||||||| ||||| ||| | ||||| || | || | |
|
|
| T |
5066783 |
agaatgagagttttaagagatttcaacttatagatgcttcttggaaggttacgaaggctaacacaatcttccaaatctattagaagaatttcactgagtt |
5066882 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
||| |||||| | || ||||| |||| | |||||||||||||||||||| |||||||||||||||| |||||||| |||||||| || | ||| | |
|
|
| T |
5066883 |
ttcctattgtaggagaaacctcggacaatattggacaatctttgagtactagcttttcaagattaggcatatatgaaaagtcaggggtgtgcatcagaca |
5066982 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
||||||||| |||||||| |||||||||| || ||||||||||||||||| |
|
|
| T |
5066983 |
atgagaatggctaagatttagaattttcagcttttccatcctctgcaagaa |
5067033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 5096700 - 5096450
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||| ||| ||||||| ||| |||||||| ||||||| ||||| ||| | ||||| || | |||| |
|
|
| T |
5096700 |
agaatgagagttttcagagatttcaacttatagatgcttcctggaaggctacgaaggctaacacaatcttccaaatctattagaagaatttcactgagat |
5096601 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||||| || | || |||||||||| | | ||||||||||| ||||| || || ||||||||||||| ||||||||| || ||||| ||||| ||| | |
|
|
| T |
5096600 |
ttccaatgctaggagaaacctcagacaacattggacaatctttaagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgtgtcagaca |
5096501 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
|||||||||||||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
5096500 |
atgagaatgactaagatttagaattttcagtttttccatcctctgcaagaa |
5096450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 5278558 - 5278308
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||| ||||||| ||| |||||| ||||||| |||||||||| | ||||||||| ||||||| ||| ||||||| ||||| ||| | |||| |
|
|
| T |
5278558 |
agaatgagtgttttcaaagatttcaacttatagatacttcttggaagactctgaaggctaatacaatcttccaagtttatcagaagaattttatcgagat |
5278459 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||||| |||| || |||||| ||| ||| || |||||| |||||| || |||||||||||||||| || |||||| || ||||||| ||| ||||| |
|
|
| T |
5278458 |
atccaatgctatgagaaacctcacacaaccttgggcaatctatgagtataagcttttcaagattaggcatgtttgaaaagtctggggtctctgtcagata |
5278359 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
|||||||||||||||||| |||||||||| || |||||||||||||||||| |
|
|
| T |
5278358 |
atgagaatgactaagattaagaattttcagcttctccatcctctgcaagaa |
5278308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 5102690 - 5102953
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||| |||||| ||| |||||| |||||||| ||||||||||| ||| |||||||| ||||||| ||||| ||| | ||| |
|
|
| T |
5102690 |
taaacacccagaaagaatgagtattttcaaagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaatctattagaagt |
5102789 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| || | |||| |||||| ||| | | |||||||||| | | ||||||||||||||||| || || ||||||||||||||||||||||| ||||||| |
|
|
| T |
5102790 |
atttcagtgagatctccaatggtaggacaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcaagtatgaaaagtcagggg |
5102889 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| || || ||| ||||||||||||||||||| |||||||||| || |||| |||||||||||| |
|
|
| T |
5102890 |
tgtgcgtcagacaatgagaatgactaagatttagaattttcagcttttccaacctctgcaagaa |
5102953 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 5344866 - 5344603
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||| ||||| |||||| |||||||| ||||||| ||| |||| |||||||| || |||| |||||| || | |||| |
|
|
| T |
5344866 |
taaacaacccgaaagaatgagagtttttagagaattcaacttatagatgcttcttggcaggctacataggctaatacagtcttccaaattaatgagaaga |
5344767 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| |||||| |||| |||||| |||| || | |||| ||| || |||||||| |||||||| |||||||||||||| ||||| ||||| || |||| |
|
|
| T |
5344766 |
attttcttgagatctccaatgctatgagaaatctcacacaaacttggacaatccacgagtactaacttttcaagattaggtaagtaagaaaagtccgggg |
5344667 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| ||| | || ||||||||||||||||||||||||||||||| || ||||||| |||| ||||| |
|
|
| T |
5344666 |
tttgtatcaggtaatgagaatgactaagattgagaattttcagcttctccatcatctgtaagaa |
5344603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 30 - 277
Target Start/End: Complemental strand, 5434024 - 5433777
Alignment:
| Q |
30 |
atgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtc |
129 |
Q |
| |
|
||||||||||||| ||| |||||| |||| ||| ||||||| |||||||| |||| ||| ||||||| ||||||||||| ||||| || || ||||| | |
|
|
| T |
5434024 |
atgagagttttcaaagatttcaacttatatatgcttcttgggaggttacataggccaatacaatcttccaaatttatcagaagaatttcattgagatggc |
5433925 |
T |
|
| Q |
130 |
caattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatg |
229 |
Q |
| |
|
|||| || | || | |||||| || || ||||||||| ||||||||| ||||||||||||||||| | |||||| || || || ||||| |||||||| |
|
|
| T |
5433924 |
caatgctaggagaaatctcagaaagacttggacaatctgtgagtactaacttttcaagattaggcaaatttgaaaagtctggtgtttgtgtcagataatg |
5433825 |
T |
|
| Q |
230 |
agaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| |||||||||| || |||||||||| || |||||| ||||||||||| |
|
|
| T |
5433824 |
acaatgactaaggttaagaattttcagcttctccattctctgcaagaa |
5433777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 291
Target Start/End: Complemental strand, 5383331 - 5383055
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||||||||| |||||| |||| ||| ||||||| ||| |||| ||||||| || |||| |||||| |||| |||| |
|
|
| T |
5383331 |
taaacaaccagaaagaatgagagttttcagagatttcaacttataaatgcttcttgggaggctacataggctaacacagtcttccaaattaatcagaaga |
5383232 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| |||||| |||| |||||| || | || ||||| |||| ||||||||||||| ||||||||| ||||||||||||||||| | ||| || || |||| |
|
|
| T |
5383231 |
attttcttgagatctccaatgctaggagaaacctcggacaacctcggacaatctgcgagtactagcttttcaagattaggcaaatttgagaagtctgggg |
5383132 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattata |
291 |
Q |
| |
|
|||| || ||||||||||||||||| || || ||||||| |||||||||||||||| |||| |||||||||| |
|
|
| T |
5383131 |
tctgcaccaggtaatgagaatgactaaggtttaggattttcagtatctccatcctctgcaag-aacataaatattata |
5383055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 14 - 277
Target Start/End: Complemental strand, 5447162 - 5446899
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||| ||||||||||| ||| |||||| |||||||| || |||| ||| |||| ||||||||||| |||| ||| ||||||| |||| |
|
|
| T |
5447162 |
taaacaaccagaaagaacgagagttttcaaagatttcaacttatagatgctttttgggaggctacataggctaatgcagtcttccaagtttatcagaaga |
5447063 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| || ||||||| || || | || |||||||||| | || ||||||||||||||||| |||| |||||||||| || |||||| |||||| |
|
|
| T |
5447062 |
attttattgagatgtctgatgctaggtgaaacctcagacaacagtgggcaatctttgagtactagtttttgaagattaggcgtgtttgaaaagtcagggc |
5446963 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| ||||| ||||| || ||||| ||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
5446962 |
tttgtgtgagatagtgcgaatggctaagattgagaatttttagcttctccatcctctgcaagaa |
5446899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 37 - 277
Target Start/End: Original strand, 5157727 - 5157967
Alignment:
| Q |
37 |
ttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgt |
136 |
Q |
| |
|
|||||||||| |||||| |||||||| ||||||||||| | | |||||||| ||||||| ||||| ||| | ||||| || | |||| |||||| | |
|
|
| T |
5157727 |
ttttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaacacaatcttccaaatctattagaagaatttcactgagatttccaatgct |
5157826 |
T |
|
| Q |
137 |
atgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatga |
236 |
Q |
| |
|
| | || |||||||||| | | ||||||||||||||||| || || ||||||||||||| ||||||||| || ||||| || || ||| ||||||||||| |
|
|
| T |
5157827 |
aggagaaacctcagacaacattggacaatctttgagtaccagcttctcaagattaggcatgtatgaaaagtctggggtgtgcgtcagacaatgagaatga |
5157926 |
T |
|
| Q |
237 |
ctaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
|||||||| |||||||| | || |||||| |||||||||| |
|
|
| T |
5157927 |
ctaagatttagaatttttagcttttccatcatctgcaagaa |
5157967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 27 - 290
Target Start/End: Original strand, 5257423 - 5257685
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
||||||| |||||| ||||| |||||| |||||||| ||||||| || | || | |||||| ||||||| |||||||||||||| || |||||| |||| |
|
|
| T |
5257423 |
agaatgaaagtttttagagatttcaacttatagatgcttcttgggagttcgcataagctaatacaatcttccaaatttatcaaaacaattttcttgagat |
5257522 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||||| | || ||| ||| ||| | ||||||||||||||||||| |||||||||||||||| || ||||| |||||| | ||| ||| | |
|
|
| T |
5257523 |
ttccaatgcttgaagaaaccctagatagcattggacaatctttgagtactaacttttcaagattaggcatgttggaaaagtcagggcttcttgtgagaca |
5257622 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattat |
290 |
Q |
| |
|
| | ||||||||||||||||||||||||| || |||||||||||||||| |||| ||||||||| |
|
|
| T |
5257623 |
acgggaatgactaagattgagaattttcagcttctccatcctctgcaag-aacataaatattat |
5257685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 21 - 277
Target Start/End: Complemental strand, 5370569 - 5370313
Alignment:
| Q |
21 |
cctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttct |
120 |
Q |
| |
|
||||| ||||| ||||| || ||||| |||||| |||| ||| ||||||||||||||| |||||||| ||||||| |||| ||| | ||||| || |
|
|
| T |
5370569 |
cctgaaagaataagagtctttagagatttcaacttataaatgcttcttggaaggttacgaaggctaacacaatcttcaaaatctattagaagaatttcgc |
5370470 |
T |
|
| Q |
121 |
taagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgt |
220 |
Q |
| |
|
|||| ||||| || | || |||||||||||| | | ||||||||||||||||| |||||||| ||||||||||||||||| || ||||| || || |
|
|
| T |
5370469 |
cgagattcccaatgctaggagaaacctcagacagcattgaacaatctttgagtactaacttttcaagcttaggcaagtatgaaaagtctggggtgtgcgt |
5370370 |
T |
|
| Q |
221 |
tagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
||| ||||||||||||||||||| |||||||| | || |||||| |||||||||| |
|
|
| T |
5370369 |
cagacaatgagaatgactaagatttagaatttttagcttttccatcatctgcaagaa |
5370313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 5425902 - 5425655
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttct-taaga |
125 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||||||||||| | ||||| || ||||||| |||||||| | ||||| ||||| | ||| |
|
|
| T |
5425902 |
agaatgagagttttcagagatttcaacttatagatgtttcttggaaggctttgaaggcgaacacaatcttctaaatttattagaagaa-tttctctgaga |
5425804 |
T |
|
| Q |
126 |
tgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagat |
225 |
Q |
| |
|
| |||||| || | || | |||||||| | | |||||||||||||| || || |||||||||||||||| | ||| ||| |||||||| | || ||| |
|
|
| T |
5425803 |
tttccaatgctaggagaaatctcagacaacattggacaatctttgagcaccagcttttcaagattaggcatgaatgtaaagtcaggggtgcgcgtcagac |
5425704 |
T |
|
| Q |
226 |
aatgagaatgactaagattgagaattttcaactgctccatcctctgcaa |
274 |
Q |
| |
|
||||||||||||||||||| |||||||||| || ||||||| |||||| |
|
|
| T |
5425703 |
aatgagaatgactaagatttagaattttcagcttttccatccactgcaa |
5425655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 277
Target Start/End: Original strand, 5147038 - 5147235
Alignment:
| Q |
80 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
179 |
Q |
| |
|
||||||| | ||||||| ||||||||||| ||||| ||| || |||| |||||| |||| || || ||||||| | | |||||||| ||||||||| |
|
|
| T |
5147038 |
aaggctagtacaatcttccaaatttatcagaagaattttattgagatatccaatactatgagaaacttcagacaacattggacaatcagagagtactagt |
5147137 |
T |
|
| Q |
180 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| ||||||||||||||||| | |||| | ||||||||||| | ||||||||| |||||||| ||||||||||| | || |||||||||||||||||| |
|
|
| T |
5147138 |
tgttcaagattaggcaagtttaaaaagtttggggtctgtgtcaaataatgagagtgactaagcttgagaatttttagcttctccatcctctgcaagaa |
5147235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 98 - 291
Target Start/End: Complemental strand, 5396871 - 5396679
Alignment:
| Q |
98 |
caaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaag |
197 |
Q |
| |
|
||||||||| | ||| | ||| || |||| |||||| ||||||| || || |||| | | |||||||| ||| |||||| | |||||||||||||| | |
|
|
| T |
5396871 |
caaatttattagaagtatttttttcagatctccaatattatgggaaacttctgacaactttggacaatcagtgactactagttgttcaagattaggcatg |
5396772 |
T |
|
| Q |
198 |
tatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaacagaaatattata |
291 |
Q |
| |
|
| |||||| || ||||||||||| | |||||||||||||||||||||||||||||||| || ||||| |||||||||| |||| |||||||||| |
|
|
| T |
5396771 |
tttgaaaagtctggggtctgtgtcaaataatgagaatgactaagattgagaattttcagcttctccagcctctgcaag-aacataaatattata |
5396679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 255
Target Start/End: Complemental strand, 5350392 - 5350160
Alignment:
| Q |
21 |
cctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttct |
120 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||| || ||||| ||||||||||| | |||||||| ||||| | ||||| ||| | ||||| || |
|
|
| T |
5350392 |
cctgaaagaatgagagttttgagagatttcaacttaaagatgcttcttggaaggctttgaaggctaacacaatcctccaaatctattagaagaatttcac |
5350293 |
T |
|
| Q |
121 |
taagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgt |
220 |
Q |
| |
|
| |||| |||||| || | || ||||| |||| | | |||||||||||||||||||| |||||||||||||||| ||||||||| || |||| ||||| |
|
|
| T |
5350292 |
tgagatctccaatgctaggagaaacctcggacaacattggacaatctttgagtactagcttttcaagattaggcatgtatgaaaagtc--gggtgtgtgt |
5350195 |
T |
|
| Q |
221 |
tagataatgagaatgactaagattgagaattttca |
255 |
Q |
| |
|
||| || ||||||||||||||| |||||||||| |
|
|
| T |
5350194 |
cagacaacaagaatgactaagatttagaattttca |
5350160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 253
Target Start/End: Original strand, 5243950 - 5244182
Alignment:
| Q |
21 |
cctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttct |
120 |
Q |
| |
|
||||| ||||||| |||||||||||| |||||| |||||||| ||||||||||| | | |||||||| ||||||| ||||| ||| | ||||| || |
|
|
| T |
5243950 |
cctgagagaatgaaagttttcagagatttcaacttatagatgcttcttggaaggcttcgaaggctaacacaatcttccaaatctattagaagaatttcac |
5244049 |
T |
|
| Q |
121 |
taagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgt |
220 |
Q |
| |
|
| |||| ||||| || | || | ||| |||| | | |||||||||||||||||| ||||||||||| | || ||||||||| || ||||| || || |
|
|
| T |
5244050 |
tgagattcccaatgctaggagaaatctcggacaacactgaacaatctttgagtactagcttttcaagatttgacatgtatgaaaagtctggggtgtgcgt |
5244149 |
T |
|
| Q |
221 |
tagataatgagaatgactaagattgagaatttt |
253 |
Q |
| |
|
||| ||||||||||||||||||| |||||||| |
|
|
| T |
5244150 |
cagacaatgagaatgactaagatttagaatttt |
5244182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 96; Significance: 6e-47; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 80 - 291
Target Start/End: Original strand, 36213971 - 36214181
Alignment:
| Q |
80 |
aaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactagg |
179 |
Q |
| |
|
||||||||| ||||||| ||||||||| | ||||||||| || ||||||||||| | ||||| |||||||||| || ||||||||| |||||||||| |
|
|
| T |
36213971 |
aaggctaatacaatcttccaaatttattagaagaactttattgagatgtccaatactgtgggaaacctcagacaatcttggacaatctgtgagtactagt |
36214070 |
T |
|
| Q |
180 |
ttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaaac |
279 |
Q |
| |
|
|||||||| ||||||| || ||||||||| || |||| ||| |||||||||||||||||||||||||||||||||| || |||| |||||||||| ||| |
|
|
| T |
36214071 |
ttttcaaggttaggcatgtttgaaaaatctggagtctttgtcagataatgagaatgactaagattgagaattttcagcttttccagcctctgcaag-aac |
36214169 |
T |
|
| Q |
280 |
agaaatattata |
291 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
36214170 |
agaaatgttata |
36214181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 249
Target Start/End: Complemental strand, 18935350 - 18935156
Alignment:
| Q |
55 |
tatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacag |
154 |
Q |
| |
|
|||||||| |||||||||| | |||||||| | || |||||||||||||| ||||||| |||||| ||| |||| || |||| || ||| |||| |
|
|
| T |
18935350 |
tatagatgcttcttggaagttcacaaaggcctgtacagtctttcaaatttattaaaagaattttcttgagaagtcctatactatgagaaaccgaggacaa |
18935251 |
T |
|
| Q |
155 |
cctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaa |
249 |
Q |
| |
|
|| || ||||||||||||| || ||||||||||| ||||||| |||||| | ||||| ||| | || | |||||||||||||||||| |||| |
|
|
| T |
18935250 |
acttgggcaatctttgagtattaacttttcaagattcggcaagtttgaaaagttcggggtttgtctcaggttatgagaatgactaagattaagaa |
18935156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 255
Target Start/End: Original strand, 34724677 - 34724903
Alignment:
| Q |
29 |
aatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagatgt |
128 |
Q |
| |
|
|||||||||||| | |||||||| |||||||| |||||||||| | |||||||| | || ||||||||||||||||| |||| |||||| |||| | |
|
|
| T |
34724677 |
aatgagagtttttactgacttcaatttatagatgcttcttggaagctcacaaaggcctgtacagtctttcaaatttatcaatagaattttcttgagattt |
34724776 |
T |
|
| Q |
129 |
ccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagataat |
228 |
Q |
| |
|
|| || || | || || |||| | |||||||||||||||| || ||||||||||| |||||||||||||| || || || ||| | | | || |
|
|
| T |
34724777 |
cctatattaggagaaactgaggacaaatttggacaatctttgagtattaacttttcaagatttggcaagtatgaaaagtctggtgtttgtttcaagttat |
34724876 |
T |
|
| Q |
229 |
gagaatgactaagattgagaattttca |
255 |
Q |
| |
|
|||||||||||||||| |||| ||||| |
|
|
| T |
34724877 |
gagaatgactaagattaagaaatttca |
34724903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 8877601 - 8877351
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||| ||| ||||| |||||| | || || ||||||||||| | | ||||||||| ||||||| ||||||||||||||||||||| || ||| |
|
|
| T |
8877601 |
agaatgagagattttagagatttcaacttgtatatacttcttggaaggctccgaaggctaatacaatcttccaaatttatcaaaagaactttattcagaa |
8877502 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||| || ||||| || | ||| || |||||||||||||||||||||||| ||||||||||||||||||| | |||| || || || ||||| |||| |
|
|
| T |
8877501 |
gtcctatagtatgcgaaatctctatcaacctcggacaatctttgagtactagcttttcaagattaggcaagtttaaaaagtctggagtttgtgtcagatg |
8877402 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
|||||| || ||||||||||||||||| | || |||||||||||||||||| |
|
|
| T |
8877401 |
atgagagtggctaagattgagaatttttagcttctccatcctctgcaagaa |
8877351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 276
Target Start/End: Original strand, 8989 - 9238
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||| ||||||||||| ||| |||||||| ||||||| ||||| ||| | ||| | || |||| |
|
|
| T |
8989 |
agaatgagagttttcagagatttcaacttatagatgcttcttggaaggctacgaaggctaacacaatcttccaaatctattagaagtatttcaccgagat |
9088 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggtctgtgttagata |
226 |
Q |
| |
|
|||||| ||||| || ||||| | || | | |||||||||||||||||||| ||||||||||||||||| |||||||| || ||||| || | | ||| |
|
|
| T |
9089 |
ctccaatggtatgagaaacctcggtcaacattggacaatctttgagtactagcttttcaagattaggcaaatatgaaaagtctggggtatgcatcaaata |
9188 |
T |
|
| Q |
227 |
atgagaatgactaagattgagaattttcaactgctccatcctctgcaaga |
276 |
Q |
| |
|
||||||||||||||||||||||||||||| || | ||| ||||||||||| |
|
|
| T |
9189 |
atgagaatgactaagattgagaattttcagcttcgccagcctctgcaaga |
9238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 47986928 - 47987191
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||| ||||| || || | || || ||||||| ||| |||| |||||||| || |||| ||||||||||| |||| |
|
|
| T |
47986928 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
47987027 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| ||||| |||||||||| || |||||| ||| || |
|
|
| T |
47987028 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
47987127 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
47987128 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
47987191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 47996215 - 47996478
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||| ||||| || || | || || ||||||| ||| |||| |||||||| || |||| ||||||||||| |||| |
|
|
| T |
47996215 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
47996314 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| ||||| |||||||||| || |||||| ||| || |
|
|
| T |
47996315 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
47996414 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
47996415 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
47996478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 48005502 - 48005765
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||| ||||| || || | || || ||||||| ||| |||| |||||||| || |||| ||||||||||| |||| |
|
|
| T |
48005502 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
48005601 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| ||||| |||||||||| || |||||| ||| || |
|
|
| T |
48005602 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
48005701 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
48005702 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
48005765 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 14 - 277
Target Start/End: Original strand, 48014787 - 48015050
Alignment:
| Q |
14 |
taaacatcctgatagaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaaga |
113 |
Q |
| |
|
|||||| || || |||||||||||||| ||||| || || | || || ||||||| ||| |||| |||||||| || |||| ||||||||||| |||| |
|
|
| T |
48014787 |
taaacagccagaaagaatgagagtttttagagattttaatttgtatgtgcttcttgggaggctacataggctaatacagtcttccaaatttatcagaaga |
48014886 |
T |
|
| Q |
114 |
actttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcagggg |
213 |
Q |
| |
|
| ||| | ||||||||||| || | || | |||||| | | | || ||||||||||||||||| ||||| |||||||||| || |||||| ||| || |
|
|
| T |
48014887 |
attttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattaggcatgtttgaaaagtcaaggc |
48014986 |
T |
|
| Q |
214 |
tctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
277 |
Q |
| |
|
| |||| |||||||||||||||||||||||||||||||| | || |||||| |||||||||| |
|
|
| T |
48014987 |
ttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaa |
48015050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 258
Target Start/End: Original strand, 22584303 - 22584534
Alignment:
| Q |
27 |
agaatgagagttttcagagacttcaacgtatagatgtttcttggaaggttacaaaggctaatgcaatctttcaaatttatcaaaagaactttcttaagat |
126 |
Q |
| |
|
|||||||||||||||| ||| |||||| | |||||||||||||| ||| |||||||||| | || |||| ||||||||| | ||||||| | || ||| |
|
|
| T |
22584303 |
agaatgagagttttcaaagatttcaacttgtagatgtttcttgggaggctacaaaggcttaaacagtcttgcaaatttattagaagaactctgttgagaa |
22584402 |
T |
|
| Q |
127 |
gtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaa-tcaggggtctgtgttagat |
225 |
Q |
| |
|
| | || ||| || ||| || || || |||||||||||||||||| ||||||||||||||| || || ||||| ||| || | | ||| |||| |
|
|
| T |
22584403 |
atacgatgctataagaaaccatagtcaagttccgacaatctttgagtactatcttttcaagattaggc-agcataaaaaagtcaaggctttctgtgagat |
22584501 |
T |
|
| Q |
226 |
aatgagaatgactaagattgagaattttcaact |
258 |
Q |
| |
|
|||||||||||||||||||||| |||||||| |
|
|
| T |
22584502 |
tgtgagaatgactaagattgagaactttcaact |
22584534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 5047 - 5102
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||||| || ||||| |
|
|
| T |
5047 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
5102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Original strand, 8506 - 8561
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
||||||| |||||||||||| ||||||||||| |||||||||| ||| || ||||| |
|
|
| T |
8506 |
ggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggt |
8561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 214
Target Start/End: Complemental strand, 6519 - 6464
Alignment:
| Q |
159 |
ggacaatctttgagtactaggttttcaagattaggcaagtatgaaaaatcaggggt |
214 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||| | ||||||| || ||||| |
|
|
| T |
6519 |
ggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggt |
6464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 9610 - 9456
Alignment:
| Q |
99 |
aaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagattaggcaagt |
198 |
Q |
| |
|
|||||||||| ||||| ||| | ||| |||||| ||||||| ||| |||||| || ||||| |||||||||||||| ||||||||||| |||| | |
|
|
| T |
9610 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
9511 |
T |
|
| Q |
199 |
atgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaatttt |
253 |
Q |
| |
|
|||| || || || || | || | || ||||||||||||||||| |||||||| |
|
|
| T |
9510 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttt |
9456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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