View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19704_high_19 (Length: 211)
Name: NF19704_high_19
Description: NF19704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19704_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 41110702 - 41110526
Alignment:
| Q |
17 |
gtgtaatttaattaatataccaaacttttttactaaaaatactcttctatacacatagaaaacaacaaatatgtagatgatgagaataggtcgcaagctg |
116 |
Q |
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| T |
41110702 |
gtgtaatttaattaatataccaaacttttttactaaaaatactcttctatacacatagaaaacaacaaatatgtagatgatgagaataggtcggaagctg |
41110603 |
T |
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| Q |
117 |
gacttcatcttctgagtttaatttggtacaacaatttaaaaacctcaactatattccattggcactggtcctataca |
193 |
Q |
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| T |
41110602 |
gactttatcttctgagtttaatttggtacaacaatttaaaaacctcaactatattccattggcactggtcctataca |
41110526 |
T |
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