View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19704_low_17 (Length: 257)
Name: NF19704_low_17
Description: NF19704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19704_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 17 - 238
Target Start/End: Original strand, 19395680 - 19395901
Alignment:
| Q |
17 |
gacattaggtgtaggtttctcagttgatccaggcaagtcaacggctggggcagcccaagaaggaggagcgtcaacacggggagcaccactgggtgcagca |
116 |
Q |
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| T |
19395680 |
gacattaggtgtaggtttctcagttgatccaggcaagtcaacggctggggcagcccaagaaggaggagcgtcaacacggggagcaccaatgggtgcagca |
19395779 |
T |
|
| Q |
117 |
ccaggagcaccaatgggagcttcaaaaatcggctgatcagcaccgggagcaccatcaggagcatcagcaagatcctcatcgtcgtccgcaacagcatcag |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19395780 |
ccaggagcaccaatgggagcttcaaaaatcggctgatcagcatcgggagcaccatcaggagcatcagcaagatcctcatcgtcgtccgcaacagcatcag |
19395879 |
T |
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| Q |
217 |
catcagcatcgggagtgggagc |
238 |
Q |
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|||||||||||||| |||||| |
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| T |
19395880 |
tatcagcatcgggagcgggagc |
19395901 |
T |
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