View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19707_high_42 (Length: 237)
Name: NF19707_high_42
Description: NF19707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19707_high_42 |
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Alignment Details
Target: chr8 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43551195 - 43551416
Alignment:
| Q |
1 |
actaacatcttccctttgctttcattgacaatataataaggtaacaaaatttgggtgcagagaacctttttatataatgataggcagagaaaatcagagt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43551195 |
actaacatcttccctttgctttcattgacaatataataaggtaacaaaatttgggttcagagaacctttttatataatgataggcagagaaaatcagagt |
43551294 |
T |
|
| Q |
101 |
aagaaatccatgtaatttgtgatattttcttcttgtcattcttgaattcatgtgaattttgaaaagtggaatgtaactatcccataatgtctgttacccc |
200 |
Q |
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|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43551295 |
aagaaatcaatgtaatttgtgatattttcttcttgtcattcttgaattcatgtgaattttgaaaagtggaatgtaactatcccataatgtctgttacccc |
43551394 |
T |
|
| Q |
201 |
ttggtagggcatttgaaataaa |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
43551395 |
ttggtagggcatttgaaataaa |
43551416 |
T |
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