View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19707_high_44 (Length: 232)
Name: NF19707_high_44
Description: NF19707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19707_high_44 |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 5643981 - 5644193
Alignment:
| Q |
1 |
tacaatattttcagcatgaaatcaaataaatgaatccaaaaacacaaacttttcaacatgaaatggaatcaaataaatgaacactaaaacacaaattttc |
100 |
Q |
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| T |
5643981 |
tacaatattttcagcatgaaatcaaataaatgaatccaaaaacacaaacttttcaacatgaaatggtatcaaataaatgaacactaaaacacaaattttt |
5644080 |
T |
|
| Q |
101 |
aaaatgaaatcatacacaatgaaaacataattttcaaactgaaatcaaactaataaaccttggaacacaatattcaacatgaaatcaattaaaataaaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5644081 |
aaaatgaaatcatacacaatgaaaacataattttcaaactgaaatcaaactaataaaccttggaacacaatattcaacatgaaatcaattaaaataaaaa |
5644180 |
T |
|
| Q |
201 |
cataattatcaac |
213 |
Q |
| |
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||||||||||||| |
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| T |
5644181 |
cataattatcaac |
5644193 |
T |
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