View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19707_low_11 (Length: 466)

Name: NF19707_low_11
Description: NF19707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19707_low_11
NF19707_low_11
[»] chr4 (36 HSPs)
chr4 (179-363)||(31307044-31307228)
chr4 (182-360)||(38766071-38766249)
chr4 (179-357)||(14854584-14854762)
chr4 (179-360)||(45994501-45994682)
chr4 (179-363)||(35972322-35972506)
chr4 (208-363)||(46016154-46016312)
chr4 (191-360)||(35334079-35334248)
chr4 (234-360)||(9012304-9012430)
chr4 (237-362)||(51626285-51626410)
chr4 (190-356)||(38844153-38844319)
chr4 (179-339)||(13686580-13686741)
chr4 (178-346)||(13948587-13948749)
chr4 (176-360)||(32005127-32005316)
chr4 (201-363)||(46250533-46250698)
chr4 (181-363)||(7096077-7096258)
chr4 (182-337)||(22189392-22189547)
chr4 (179-343)||(45695806-45695970)
chr4 (209-351)||(17135106-17135247)
chr4 (179-283)||(11140436-11140540)
chr4 (268-352)||(33529325-33529409)
chr4 (191-349)||(56447115-56447272)
chr4 (214-360)||(14042843-14042989)
chr4 (181-337)||(10199111-10199264)
chr4 (179-330)||(51853677-51853826)
chr4 (223-334)||(47023425-47023536)
chr4 (209-341)||(22017473-22017605)
chr4 (191-360)||(2434550-2434719)
chr4 (271-363)||(18841556-18841649)
chr4 (179-224)||(25768769-25768814)
chr4 (179-223)||(37241392-37241436)
chr4 (250-352)||(3649034-3649137)
chr4 (298-353)||(15133473-15133528)
chr4 (182-280)||(16547415-16547514)
chr4 (190-254)||(25712503-25712567)
chr4 (317-353)||(38787752-38787788)
chr4 (210-278)||(48998068-48998136)
[»] chr7 (48 HSPs)
chr7 (178-363)||(29059783-29059968)
chr7 (194-363)||(31492097-31492266)
chr7 (179-363)||(19477230-19477411)
chr7 (179-360)||(28537369-28537546)
chr7 (179-325)||(13254117-13254263)
chr7 (178-341)||(8839281-8839444)
chr7 (178-360)||(21747021-21747202)
chr7 (242-363)||(11486722-11486843)
chr7 (178-362)||(46373651-46373837)
chr7 (178-360)||(35707825-35708006)
chr7 (181-360)||(42741790-42741972)
chr7 (179-301)||(40099312-40099434)
chr7 (229-357)||(24172236-24172366)
chr7 (191-330)||(27484060-27484199)
chr7 (182-363)||(20207480-20207660)
chr7 (179-329)||(7265325-7265475)
chr7 (181-290)||(2657887-2657996)
chr7 (257-327)||(14545000-14545070)
chr7 (271-360)||(37339714-37339803)
chr7 (181-285)||(7190415-7190519)
chr7 (220-363)||(23933629-23933772)
chr7 (307-363)||(28665197-28665253)
chr7 (276-360)||(31776494-31776578)
chr7 (190-339)||(4059695-4059843)
chr7 (308-361)||(36821060-36821113)
chr7 (209-339)||(24579456-24579584)
chr7 (276-363)||(29428770-29428857)
chr7 (212-286)||(40211965-40212039)
chr7 (225-363)||(45778889-45779027)
chr7 (260-341)||(4562778-4562859)
chr7 (251-340)||(30614683-30614772)
chr7 (270-360)||(32469986-32470078)
chr7 (190-278)||(5905812-5905900)
chr7 (214-361)||(18038002-18038150)
chr7 (217-343)||(1424590-1424716)
chr7 (212-278)||(2871038-2871104)
chr7 (268-362)||(3231287-3231381)
chr7 (181-247)||(5546679-5546745)
chr7 (211-281)||(12142637-12142707)
chr7 (313-363)||(49118227-49118277)
chr7 (179-276)||(2371127-2371224)
chr7 (191-304)||(24512617-24512730)
chr7 (209-278)||(37900434-37900503)
chr7 (209-278)||(37906945-37907014)
chr7 (209-321)||(21411644-21411756)
chr7 (191-251)||(32469921-32469981)
chr7 (295-363)||(33299174-33299242)
chr7 (191-331)||(46567568-46567708)
[»] chr5 (21 HSPs)
chr5 (178-363)||(10591905-10592090)
chr5 (241-363)||(5123476-5123598)
chr5 (179-360)||(30784967-30785148)
chr5 (191-363)||(31113325-31113497)
chr5 (190-363)||(22187976-22188147)
chr5 (178-336)||(2798320-2798477)
chr5 (178-336)||(2804487-2804644)
chr5 (182-329)||(18909313-18909457)
chr5 (179-290)||(28023494-28023605)
chr5 (218-355)||(35774603-35774740)
chr5 (277-363)||(25983742-25983828)
chr5 (195-362)||(12682630-12682797)
chr5 (267-354)||(29553606-29553693)
chr5 (266-337)||(36212962-36213033)
chr5 (179-351)||(10795308-10795478)
chr5 (221-351)||(12336018-12336148)
chr5 (209-304)||(12487304-12487398)
chr5 (208-342)||(32313105-32313238)
chr5 (256-339)||(18244640-18244723)
chr5 (209-279)||(23422731-23422801)
chr5 (295-363)||(5051684-5051753)
[»] chr8 (30 HSPs)
chr8 (178-363)||(4125002-4125187)
chr8 (179-363)||(2743912-2744096)
chr8 (185-363)||(19715703-19715882)
chr8 (179-360)||(30935983-30936164)
chr8 (191-363)||(13468723-13468895)
chr8 (179-349)||(12958077-12958247)
chr8 (191-351)||(30055991-30056151)
chr8 (179-361)||(36994478-36994662)
chr8 (199-333)||(15682928-15683062)
chr8 (251-356)||(7839238-7839343)
chr8 (190-314)||(35206990-35207114)
chr8 (181-253)||(44705653-44705725)
chr8 (236-360)||(24988530-24988659)
chr8 (307-363)||(39086859-39086915)
chr8 (208-287)||(27121804-27121883)
chr8 (181-360)||(44638964-44639143)
chr8 (179-232)||(39086797-39086850)
chr8 (208-363)||(16701358-16701512)
chr8 (179-257)||(13005753-13005831)
chr8 (212-358)||(28377670-28377815)
chr8 (191-304)||(32422809-32422923)
chr8 (208-329)||(21032305-21032425)
chr8 (280-363)||(8521778-8521860)
chr8 (179-247)||(33404376-33404444)
chr8 (182-330)||(23981482-23981632)
chr8 (261-312)||(29284966-29285017)
chr8 (186-300)||(10030944-10031058)
chr8 (191-287)||(4321558-4321654)
chr8 (226-286)||(8878150-8878210)
chr8 (190-286)||(11363259-11363354)
[»] chr2 (45 HSPs)
chr2 (179-362)||(42745095-42745278)
chr2 (183-363)||(5394380-5394559)
chr2 (179-362)||(31579208-31579391)
chr2 (178-360)||(18105344-18105525)
chr2 (179-298)||(44732616-44732735)
chr2 (179-351)||(9438126-9438298)
chr2 (179-304)||(12133267-12133392)
chr2 (179-360)||(17981477-17981657)
chr2 (178-283)||(37568785-37568890)
chr2 (182-353)||(993736-993906)
chr2 (176-349)||(7020352-7020523)
chr2 (179-330)||(44752205-44752356)
chr2 (181-303)||(7157479-7157601)
chr2 (177-265)||(28365926-28366014)
chr2 (204-355)||(38372980-38373129)
chr2 (277-360)||(25423821-25423904)
chr2 (229-363)||(37179979-37180108)
chr2 (179-325)||(33756956-33757102)
chr2 (241-341)||(38743779-38743879)
chr2 (214-341)||(14121882-14122009)
chr2 (289-363)||(37092173-37092247)
chr2 (184-301)||(17627543-17627660)
chr2 (178-301)||(17672609-17672732)
chr2 (270-352)||(12233064-12233146)
chr2 (191-340)||(39401070-39401219)
chr2 (209-353)||(38463964-38464108)
chr2 (283-352)||(14551557-14551626)
chr2 (209-301)||(17658471-17658563)
chr2 (178-286)||(24359543-24359650)
chr2 (181-279)||(3772605-3772703)
chr2 (268-353)||(14412789-14412874)
chr2 (251-344)||(35476224-35476317)
chr2 (289-340)||(17655750-17655801)
chr2 (196-354)||(24412914-24413071)
chr2 (269-347)||(34386552-34386630)
chr2 (251-301)||(39314497-39314547)
chr2 (313-363)||(44814951-44815001)
chr2 (277-354)||(13835444-13835521)
chr2 (237-286)||(13986992-13987041)
chr2 (237-286)||(13992890-13992939)
chr2 (326-363)||(45413956-45413993)
chr2 (314-354)||(1682136-1682176)
chr2 (183-255)||(40688817-40688888)
chr2 (210-325)||(42905643-42905755)
chr2 (335-363)||(44732587-44732615)
[»] scaffold0182 (1 HSPs)
scaffold0182 (201-363)||(26332-26494)
[»] chr3 (33 HSPs)
chr3 (176-363)||(30995943-30996130)
chr3 (179-363)||(48204289-48204473)
chr3 (179-363)||(27763702-27763884)
chr3 (179-363)||(25224678-25224862)
chr3 (181-362)||(38331109-38331290)
chr3 (241-360)||(20861289-20861408)
chr3 (179-337)||(14352533-14352694)
chr3 (210-363)||(22288245-22288398)
chr3 (237-353)||(55123134-55123250)
chr3 (179-305)||(38088614-38088740)
chr3 (191-363)||(40294603-40294775)
chr3 (238-363)||(1642644-1642769)
chr3 (202-355)||(48210946-48211099)
chr3 (287-363)||(8757431-8757507)
chr3 (212-355)||(43621297-43621444)
chr3 (176-329)||(15283051-15283200)
chr3 (182-292)||(42514586-42514698)
chr3 (236-363)||(22288557-22288684)
chr3 (223-354)||(39950235-39950366)
chr3 (236-363)||(46725461-46725587)
chr3 (236-330)||(15446028-15446126)
chr3 (308-363)||(40318427-40318482)
chr3 (228-361)||(11767138-11767271)
chr3 (208-281)||(22755652-22755725)
chr3 (268-363)||(25739155-25739251)
chr3 (209-280)||(28967243-28967314)
chr3 (181-244)||(46604657-46604720)
chr3 (179-278)||(3765225-3765326)
chr3 (208-280)||(54877841-54877913)
chr3 (289-360)||(44941246-44941316)
chr3 (209-303)||(9651059-9651153)
chr3 (250-352)||(23189515-23189617)
chr3 (322-363)||(22755727-22755770)
[»] chr1 (47 HSPs)
chr1 (2-174)||(46706120-46706294)
chr1 (179-363)||(22022099-22022283)
chr1 (176-363)||(16756058-16756245)
chr1 (238-363)||(36806649-36806774)
chr1 (211-363)||(18428120-18428271)
chr1 (178-363)||(45806214-45806399)
chr1 (179-358)||(28724652-28724830)
chr1 (197-363)||(12035546-12035713)
chr1 (214-363)||(46864105-46864254)
chr1 (227-359)||(9780971-9781103)
chr1 (260-362)||(42297421-42297523)
chr1 (181-353)||(10750579-10750750)
chr1 (234-363)||(39547342-39547471)
chr1 (181-339)||(10840998-10841157)
chr1 (236-353)||(7242795-7242912)
chr1 (271-362)||(15642526-15642617)
chr1 (191-362)||(32534074-32534244)
chr1 (191-280)||(29124736-29124825)
chr1 (271-353)||(44913180-44913262)
chr1 (191-347)||(31733685-31733841)
chr1 (191-286)||(36982346-36982441)
chr1 (212-286)||(32883625-32883699)
chr1 (191-278)||(17600561-17600648)
chr1 (191-338)||(25655267-25655414)
chr1 (182-300)||(35692467-35692585)
chr1 (190-286)||(24801371-24801467)
chr1 (275-362)||(2044472-2044559)
chr1 (179-238)||(14500361-14500420)
chr1 (190-265)||(21774594-21774668)
chr1 (195-281)||(7624870-7624955)
chr1 (209-343)||(36086866-36087000)
chr1 (271-360)||(10367575-10367664)
chr1 (209-286)||(40019250-40019327)
chr1 (195-283)||(52912616-52912702)
chr1 (210-301)||(13546436-13546527)
chr1 (191-338)||(28506280-28506425)
chr1 (296-363)||(49071673-49071740)
chr1 (193-331)||(33059736-33059870)
chr1 (237-318)||(36522259-36522340)
chr1 (256-352)||(61161-61256)
chr1 (295-363)||(6643877-6643945)
chr1 (191-327)||(11530520-11530655)
chr1 (193-280)||(10303107-10303194)
chr1 (376-415)||(46706307-46706346)
chr1 (266-327)||(32883561-32883622)
chr1 (296-344)||(6607691-6607739)
chr1 (235-300)||(28286474-28286540)
[»] chr6 (22 HSPs)
chr6 (190-360)||(12411138-12411308)
chr6 (179-363)||(21910184-21910367)
chr6 (178-360)||(31412101-31412282)
chr6 (208-360)||(28099251-28099403)
chr6 (234-360)||(12836878-12837004)
chr6 (182-327)||(423637-423782)
chr6 (178-362)||(25084012-25084196)
chr6 (195-338)||(21028982-21029129)
chr6 (191-359)||(31107475-31107643)
chr6 (181-363)||(15614551-15614733)
chr6 (182-361)||(278374-278552)
chr6 (277-351)||(9536844-9536918)
chr6 (191-280)||(27735469-27735557)
chr6 (181-339)||(28933119-28933277)
chr6 (268-342)||(1534320-1534394)
chr6 (209-339)||(3237929-3238058)
chr6 (257-338)||(21028845-21028924)
chr6 (179-300)||(5944821-5944942)
chr6 (242-363)||(17177180-17177301)
chr6 (181-300)||(26477740-26477859)
chr6 (190-352)||(17457055-17457217)
chr6 (179-283)||(35224550-35224651)
[»] scaffold0009 (2 HSPs)
scaffold0009 (270-354)||(27212-27296)
scaffold0009 (184-275)||(32330-32421)
[»] scaffold0020 (1 HSPs)
scaffold0020 (178-265)||(167833-167918)
[»] scaffold0071 (1 HSPs)
scaffold0071 (236-330)||(16066-16164)
[»] scaffold0013 (1 HSPs)
scaffold0013 (296-363)||(29130-29197)
[»] scaffold0189 (1 HSPs)
scaffold0189 (221-311)||(10973-11063)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 4e-88; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 179 - 363
Target Start/End: Complemental strand, 31307228 - 31307044
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31307228 acccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 31307129  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31307128 agggagagcctgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 31307044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 182 - 360
Target Start/End: Original strand, 38766071 - 38766249
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  38766071 caagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggtttgaatccagccttgggcatgcagcagcgttaaaactcttagg 38766170  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  38766171 gagagtctgccgcccatttgggtctcacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgattta 38766249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 179 - 357
Target Start/End: Original strand, 14854584 - 14854762
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||    
T  14854584 acccaagagcgcttagatgagatggaacggttctcttctagcttaaccaaggttctgggttcgaatccagccttgggcatgcagcatcgttaaaactctt 14854683  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggt 357  Q
    ||||||||| ||||||||||||||||   ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14854684 agggagagcttgccgcccatttgggtccaacaattctcgagggattagtctctgcagttgcgcgcggaggatacccggt 14854762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 179 - 360
Target Start/End: Original strand, 45994501 - 45994682
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||  ||||||||||||    
T  45994501 acccaagagcgtttagatgagatggaacaggtctcttctagcttaaccaaggtcctggattcgaatccagccttgggcatgcaacaacgttaaaactctt 45994600  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||||||| ||||||||||||| |||||||||||||| |||||||||| |||||||| |||  ||||||||| |||||    
T  45994601 agggagagcctgacgcccatttgggtctcacaatgctcgagagattagtctccgcagttgcacgccaaggatacccagttta 45994682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 35972322 - 35972506
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||| ||    
T  35972322 acccaagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtcttgggttcgaatccagccatgggcatacagcagcgttaaaactatt 35972421  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||  ||||||||||||||||  ||| ||| |||||||||||||||| ||||||||| ||||||||||||  ||||||||    
T  35972422 agggagagtttgccgcccatttgggtcccactatgttcgagggattagtctccgcagttgcgtgcggaggatacctagtttacac 35972506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 208 - 363
Target Start/End: Original strand, 46016154 - 46016312
Alignment:
Q  208 ggtctcttctagcttaaccaag---gtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggt 304  Q
    ||||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46016154 ggtctcttctagcttaaccaagtaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggt 46016253  T
Q  305 ttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
      |||||||||||| | ||||||||| | ||||||||| |||||||||||| |||||||    
T  46016254 cccacaatgctcgaagaattagtctccgtagttgcgcgtggaggatacccgatttacac 46016312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 191 - 360
Target Start/End: Complemental strand, 35334248 - 35334079
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||||||||| |||||||||||||||||||||||  | |||||| || |||||||||||||||||||| |||||||||||||| ||||| | |    
T  35334248 ttagatgagatggaacaagtctcttctagcttaaccaaggttcttggttcgtattcagccttgggcatgcagcagagttaaaactcttagagagagtccg 35334149  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||||||||  |||||| ||||||||||||||||| ||||||||||| | |||||| ||||||||    
T  35334148 ccgcccatttgggtcccacaatactcgagggattagtctccgcagttgcgcgtgaaggatatccggttta 35334079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 234 - 360
Target Start/End: Original strand, 9012304 - 9012430
Alignment:
Q  234 tgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgc 333  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||||||| ||    
T  9012304 tgggttcgaatctagccttgggcatgcagcagtgttcaaactcttagggagagcttgccgcccacttgggtcccacaatgctcgagggattagtctccgc 9012403  T
Q  334 agttgcgcgcggaggatacccggttta 360  Q
    |||||||||||||||||||||| ||||    
T  9012404 agttgcgcgcggaggatacccgattta 9012430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 237 - 362
Target Start/End: Complemental strand, 51626410 - 51626285
Alignment:
Q  237 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagt 336  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||  |||| |||||||| |||||||||| |||||    
T  51626410 gttcgaatccagccttgggcatgcagcagtgttaaaacttttagggagagtctgccgtccatttgggtcccacagtgctcgagagattagtctccgcagt 51626311  T
Q  337 tgcgcgcggaggatacccggtttaca 362  Q
    ||||||||||||||||||| ||||||    
T  51626310 tgcgcgcggaggatacccgatttaca 51626285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 190 - 356
Target Start/End: Complemental strand, 38844319 - 38844153
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 289  Q
    |||| ||||||||||||  |||||||||||||||||||||||| || ||||||||||||| ||||||||||| ||| ||||||||||||||| |||| ||    
T  38844319 cttaaatgagatggaacgagtctcttctagcttaaccaaggtcatgagttcgaatccagctttgggcatgcaacagcgttaaaactcttaggaagagtct 38844220  T
Q  290 gccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccgg 356  Q
    ||||||||||||     ||||||||||||| ||||||||||| | ||| ||||| ||||||||||||    
T  38844219 gccgcccatttgacccccacaatgctcgagagattagtctctactgttacgcgcagaggatacccgg 38844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 179 - 339
Target Start/End: Original strand, 13686580 - 13686741
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| |||||||||||||| |  |||||||||| |||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||||||    
T  13686580 acccaagagcgcttagatgagatggcatgggtctcttcttgcttaaccaaggtcctgggttcgaatccatccttgggcgtgcagcagcgttaaaactctt 13686679  T
Q  279 -agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgc 339  Q
     ||||||||  ||||| |||||||||| |||||| ||||||| ||||||||||  |||||||    
T  13686680 aagggagagtttgccgtccatttgggtctcacaaggctcgagagattagtctccacagttgc 13686741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 178 - 346
Target Start/End: Complemental strand, 13948749 - 13948587
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||| | |||||||| ||  ||| ||||||||||||  ||||||||||      ||||||||||||||||||| |||||||||||||||||||||    
T  13948749 aacccaagaactcttagatgggaatgaataggtctcttctatattaaccaagg------gttcgaatccagccttgggtatgcagcagtgttaaaactct 13948656  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcgga 346  Q
    ||||||||| || ||| |||||||  | |||||||||||||||||||||||||||||||||||||||||    
T  13948655 tagggagagtctaccgtccatttgaatctcacaatgctcgagggattagtctctgcagttgcgcgcgga 13948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 176 - 360
Target Start/End: Complemental strand, 32005316 - 32005127
Alignment:
Q  176 aaaacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcag-----cagtgtta 270  Q
    ||||||||||||  ||| |||||||||||| |||||||||||| ||||||||| ||| || |||||||| |||| |||||||||||      ||||||||    
T  32005316 aaaacccaagagagcttggatgagatggaataggtctcttctaacttaaccaaagtcctgagttcgaattcagctttgggcatgcattgcatcagtgtta 32005217  T
Q  271 aaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||||||||||| |||||||| |||| | | ||| |||||||||| |||||||||| ||| ||  |||||||||||||||||||||    
T  32005216 aaactcttagggagagtctgccgcctatttagatctcaaaatgctcgagagattagtctccgcaattatgcgcggaggatacccggttta 32005127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 201 - 363
Target Start/End: Complemental strand, 46250698 - 46250533
Alignment:
Q  201 tggaacaggtctcttctagcttaaccaag---gtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgccca 297  Q
    |||||| || |||||||||||||||||||   ||| | ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46250698 tggaacggggctcttctagcttaaccaagtaggtcctaggttcgaatccagtcttgggcatgcagcagtgttaaaactcttatggaaagcctgccgccca 46250599  T
Q  298 tttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||  ||| |||||||| | ||||||||| || |||| ||| |||||||| |||| ||||||    
T  46250598 tttgggtcccacgatgctcgaagaattagtctccgcggttgtgcgtggaggataaccggattacac 46250533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 181 - 363
Target Start/End: Original strand, 7096077 - 7096258
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||| | |||||||||||||  |||||| ||||||||||||||||||||  |||||| |||| ||| |||| | ||||||||  ||||||||||||||    
T  7096077 ccaagaacgcttagatgagatgacacaggtttcttctagcttaaccaaggttttgggtttgaatacagtcttgagtatgcagcaaagttaaaactcttag 7096176  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||| | |||||||||| ||| | ||||||||| || |||||||||   ||||||| |||||| |||||||| |||||||    
T  7096177 ggagagcttaccgcccatttaggtcttacaatgctcaagagattagtctgcacagttgcacgcgga-gatacccgatttacac 7096258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 182 - 337
Target Start/End: Complemental strand, 22189547 - 22189392
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    |||||||||||||||||||||  |   ||||||||||||||||||||||||  | ||||||||||| ||||| ||||||||||   ||||||||||||||    
T  22189547 caagagcacttagatgagatgacatgagtctcttctagcttaaccaaggtccagagttcgaatccaaccttgtgcatgcagcaacattaaaactcttagg 22189448  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt 337  Q
     ||||  ||||||| || |||||  ||||| |||||||| ||||||||||| ||||    
T  22189447 tagagattgccgcctatatgggtcccacaaggctcgaggaattagtctctgtagtt 22189392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 179 - 343
Target Start/End: Complemental strand, 45695970 - 45695806
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||| | |||||||||||| ||||  |||| |||||| || ||||||||| |||||| ||||||| ||||| ||||| ||||| ||||||| | ||    
T  45695970 acccaagaacgcttagatgagatagaacgagtcttttctagtttgaccaaggtcctgggtttgaatccaaccttgagcatgtagcagcgttaaaattttt 45695871  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgc 343  Q
    | ||||||| || || |||||||||||  |||| ||| || |||||||||| |||||||||||||    
T  45695870 aaggagagcttgtcgtccatttgggttctacaaggcttgatggattagtctatgcagttgcgcgc 45695806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 209 - 351
Target Start/End: Original strand, 17135106 - 17135247
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    |||||||||||||||| ||| ||| | | |||||||||||||||| ||||||||||| ||||||||||||||||||||  |||||| |||||| ||  ||    
T  17135106 gtctcttctagcttaatcaaagtcctag-ttcgaatccagccttgtgcatgcagcagcgttaaaactcttagggagagtttgccgcgcatttgagtccca 17135204  T
Q  309 caatgctcgagggattagtctctgcagttgcgcgcggaggata 351  Q
     ||  |||||||||||||||||   |||||||| |||||||||    
T  17135205 gaagactcgagggattagtctcaaaagttgcgcacggaggata 17135247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 11140436 - 11140540
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||| ||||   || | | ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||||    
T  11140436 acccaagagcgcttagataagataacacggctatcttctagcttaaccaaggtcctggtttcgaatccagccttgggcatgcagcagctttaaaactctt 11140535  T
Q  279 aggga 283  Q
    |||||    
T  11140536 aggga 11140540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 268 - 352
Target Start/End: Original strand, 33529325 - 33529409
Alignment:
Q  268 ttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatac 352  Q
    |||||||||||||||||||| ||||||||||||||||  |||||| || |||||||||||||| |||||||||| ||||||||||    
T  33529325 ttaaaactcttagggagagcttgccgcccatttgggtcccacaatactggagggattagtctccgcagttgcgcacggaggatac 33529409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 191 - 349
Target Start/End: Complemental strand, 56447272 - 56447115
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||| ||||||  || ||| |||||||| |||||||| ||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||  ||    
T  56447272 ttagaagagatgtcacgggtttcttctagtttaaccaaagtcctaggttcgaatccagctatgggcatgcagcagtgttaaaactcttagggagagtttg 56447173  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggagga 349  Q
    |  ||||||| || | |||||  || ||||||||| ||| |||| |||||||| |||||    
T  56447172 ctacccattt-ggatccacaagacttgagggattaatctatgcaattgcgcgcagagga 56447115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 14042843 - 14042989
Alignment:
Q  214 ttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatg 313  Q
    ||||| ||||||||| ||  |||||||||||| || |||||||||||||| | ||| |||||||| |||||| | || || |||||||| || |||||||    
T  14042843 ttctaacttaaccaacgttctgggttcgaatcaagtcttgggcatgcagccgcgtttaaactcttggggagaacatgtcgtccatttggattccacaatg 14042942  T
Q  314 ctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||| ||||||| ||||| |  ||| ||||| |||||| |||||||||    
T  14042943 ctcaagggatttgtctccgtggttacgcgcagaggatgcccggttta 14042989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 181 - 337
Target Start/End: Complemental strand, 10199264 - 10199111
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||  ||||||||||||||||| |||||||| || ||||||||||||| || |||||||||||  |||| |||||  |||| |||||||  ||||     
T  10199264 ccaagagtgcttagatgagatggaacgggtctcttataacttaaccaaggtcttgtgttcgaatcca-acttgagcatgtggcagcgttaaaa--cttaa 10199168  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt 337  Q
    ||||||| ||||||||||||  ||| || ||| ||||| ||| ||||||| ||||||    
T  10199167 ggagagcttgccgcccatttaagttccataatactcgaaggaatagtctccgcagtt 10199111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 179 - 330
Target Start/End: Original strand, 51853677 - 51853826
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| |||||||||||| |||   |||||||||| ||||||||| ||  | ||||||||| ||||||||||||||||||    |||||||||||    
T  51853677 acccaagagcgcttagatgagatagaatgagtctcttctaacttaaccaaagttct-ggttcgaattcagccttgggcatgcagcttccttaaaactctt 51853775  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
    | ||| ||  ||| | |||||| ||| ||||||| |||||||||||||||||    
T  51853776 a-ggaaagtttgcggtccattttggtctcacaatactcgagggattagtctc 51853826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 223 - 334
Target Start/End: Original strand, 47023425 - 47023536
Alignment:
Q  223 aaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgaggga 322  Q
    |||||||||| | ||||| ||||||| ||| |||||||| ||  ||||||||||||||||||||  || || ||||||||||  |||||  ||||| |||    
T  47023425 aaccaaggtccttggttccaatccagacttaggcatgcaacaaagttaaaactcttagggagagtttgtcgtccatttgggtcccacaagactcgaagga 47023524  T
Q  323 ttagtctctgca 334  Q
    ||||||||||||    
T  47023525 ttagtctctgca 47023536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 341
Target Start/End: Original strand, 22017473 - 22017605
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    |||||||||| ||||| |||  |  ||| ||| ||||||| |||| | ||| |||||||||||||| |||||||| ||| ||||||| |||||  |  ||    
T  22017473 gtctcttctaacttaatcaaaattttggattcaaatccagtcttgagtatgtagcagtgttaaaacccttagggaaagcttgccgcctatttgaatcaca 22017572  T
Q  309 caatgctcgagggattagtctctgcagttgcgc 341  Q
    ||||| ||||| ||||| ||||| |||||||||    
T  22017573 caatgatcgagcgattaatctctacagttgcgc 22017605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 360
Target Start/End: Original strand, 2434550 - 2434719
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||| |  ||||||||||| | |||||||||  |  | ||||||||||||||||||| ||| || ||  ||||||||||||| | | ||  ||    
T  2434550 ttagatgagattgtgcaggtctcttcaatcttaaccaaaattttaggttcgaatccagccttggacatacaacaacgttaaaactcttacgaaaagtttg 2434649  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
     ||| ||||| |||   |||| ||||||| |||| || || ||||||||| |||||||||| | ||||||    
T  2434650 tcgctcatttaggtcctacaaggctcgagtgattggtatccgcagttgcgggcggaggatatctggttta 2434719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 363
Target Start/End: Original strand, 18841556 - 18841649
Alignment:
Q  271 aaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgca-gttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||| ||||  ||||||| |||||| |   |||| |||| ||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  18841556 aaactcttaggtagagtttgccgccaatttggatcctacaaggctcaagggattagtctccgcaagttgcgcacggaggatacctggtttacac 18841649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 25768814 - 25768769
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaa 224  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||    
T  25768814 acccaagagcgcttagatgagatggaacgggtctcttctagtttaa 25768769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 37241436 - 37241392
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagctta 223  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||    
T  37241436 acccaagagcgcttagataagatggaacaggtctctactagctta 37241392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 352
Target Start/End: Complemental strand, 3649137 - 3649034
Alignment:
Q  250 cttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgc-agttgcgcgcggagg 348  Q
    |||||||||||| ||  ||||||||||||||||||||  | |||| ||||||| |  |||||  ||||| |||||||||||| | |||||| | ||||||    
T  3649137 cttgggcatgcaacaacgttaaaactcttagggagagttttccgctcatttggatcgcacaagactcgaaggattagtctctacaagttgcacacggagg 3649038  T
Q  349 atac 352  Q
    ||||    
T  3649037 atac 3649034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 298 - 353
Target Start/End: Original strand, 15133473 - 15133528
Alignment:
Q  298 tttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    |||||||  ||||||| | ||| |||||||||| ||||||||||||||||||||||    
T  15133473 tttgggtcccacaatgtttgagagattagtctccgcagttgcgcgcggaggatacc 15133528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 16547514 - 16547415
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaacc-aaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||| |||| |||||||||| |  | ||||||||||||||||| |||||| || |||| |||||| | |||||  |||| |||||||||| |||||||    
T  16547514 caagagaacttggatgagatggtaatgatctcttctagcttaaccaaaggtcatgagttcaaatccaactttgggattgcaacagtgttaaatctcttag 16547415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 25712567 - 25712503
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgg 254  Q
    |||||||||||||  ||| ||||| |||||||||| ||||||| ||  ||||||||||| |||||    
T  25712567 cttagatgagatgatacaagtctcctctagcttaaacaaggtcatgaattcgaatccagtcttgg 25712503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 38787752 - 38787788
Alignment:
Q  317 gagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    ||||||||||||| ||||||||||||| |||||||||    
T  38787752 gagggattagtctttgcagttgcgcgcagaggatacc 38787788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 48998136 - 48998068
Alignment:
Q  210 tctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||| || ||||| ||||||| || ||||||||| || ||||| |||||| ||| ||||||||||||    
T  48998136 tctcttttaacttaatcaaggtcctgagttcgaatcgagtcttggacatgcatcagcgttaaaactctt 48998068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 3e-86; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 178 - 363
Target Start/End: Original strand, 29059783 - 29059968
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29059783 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 29059882  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  29059883 tagggagagcctgccgcccatttgggtcccacaatgcttgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 29059968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 194 - 363
Target Start/End: Original strand, 31492097 - 31492266
Alignment:
Q  194 gatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccg 293  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31492097 gatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccg 31492196  T
Q  294 cccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||| |||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31492197 cccatttaggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 31492266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 179 - 363
Target Start/End: Complemental strand, 19477411 - 19477230
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||||||||||||    
T  19477411 acccaagagcgtttagatgagatggaacgggtctcttctagcttaaccaaggttctgggtttgaatccagccttgggcatgcaacagtgttaaaactctt 19477312  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||| ||||| ||||||||||  ||||||||| |||||||||||||| ||||||  |||||||||||| | |||||||||    
T  19477311 agggagagcttgccggccatttgggtcccacaatgct-gagggattagtctccgcagtt--gcgcggaggatagctggtttacac 19477230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 179 - 360
Target Start/End: Original strand, 28537369 - 28537546
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||| ||||||  |||||||||||||||||||||||||||| ||  ||||||||||||    
T  28537369 acccaagagcgcttagatgagatggaacgggtctcttctaacttaatcaaggttttgggttcgaatccagccttgggcatgcaacaacgttaaaactctt 28537468  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||||||||||||||||||||    | ||||| |||||||||||||| |||||||| |||| |||||||||||||||    
T  28537469 agggagagcctgccgcccatttgggt----ccatgcttgagggattagtctccgcagttgcacgcgaaggatacccggttta 28537546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 179 - 325
Target Start/End: Complemental strand, 13254263 - 13254117
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||| ||| ||||||||    
T  13254263 acccaagagcgcttagatgagatggaacgggtctcttctagcttaaccaaggtcctgagttcgaatccagccttaggcatgcagcagcgttgaaactctt 13254164  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggatta 325  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||    
T  13254163 agggagagcctgccgcccatttaggtcccacaatgctcgagggatta 13254117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 178 - 341
Target Start/End: Complemental strand, 8839444 - 8839281
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  8839444 aacccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactct 8839345  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgc 341  Q
    ||||||||  |||||||| |||| | |  |||||| ||||||||||||||||| ||| ||||||    
T  8839344 tagggagaatctgccgcctatttagatcccacaatactcgagggattagtctccgcaattgcgc 8839281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 178 - 360
Target Start/End: Complemental strand, 21747202 - 21747021
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    |||||||||||  |||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||| || ||||||| |||| |||||||||||    
T  21747202 aacccaagagcgtttagatgagatggaacgggtctcttctaacttaaccaaggtcctgggt-cgaatccagctttaggcatgctgcagcgttaaaactct 21747104  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||||||| || |||||||||||  |||||| ||||||||||||||||  ||||||| |||||||||||||| ||||||    
T  21747103 tagggagagcctaccacccatttgggtcccacaatcctcgagggattagtcttcgcagttgtgcgcggaggatacctggttta 21747021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 242 - 363
Target Start/End: Complemental strand, 11486843 - 11486722
Alignment:
Q  242 aatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgc 341  Q
    |||||||||||||||||||| | ||||||||||||||| | ||||| ||||||||||||||||| |||||||||| || ||||||||||| |||||||||    
T  11486843 aatccagccttgggcatgcatctgtgttaaaactcttaagaagagcttgccgcccatttgggttccacaatgctcaagagattagtctctacagttgcgc 11486744  T
Q  342 gcggaggatacccggtttacac 363  Q
    ||||||||||||||||||||||    
T  11486743 gcggaggatacccggtttacac 11486722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 178 - 362
Target Start/End: Original strand, 46373651 - 46373837
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||| |||||||||||||   | ||||||||||||||||| |||| || ||||||||||||||| ||||||||| || ||  ||||||||||     
T  46373651 aacccaagagctcttagatgagatgacgcgggtctcttctagcttaagcaagatcctgggttcgaatccagtcttgggcatacaacatcgttaaaactcg 46373750  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt--gcgcgcggaggatacccggtttaca 362  Q
    |||||||||| ||||||| ||||||||  ||||||||||||| |||||||||  ||||||  ||||||||| |||||||| ||||||    
T  46373751 tagggagagcttgccgcctatttgggtcacacaatgctcgagagattagtcttggcagtttcgcgcgcggaagatacccgatttaca 46373837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 178 - 360
Target Start/End: Original strand, 35707825 - 35708006
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    |||||||||||  |||||| |||| ||||||||||||||||| |||||||||||  ||| |||||||||| | |||| |||||| ||  ||||||| |||    
T  35707825 aacccaagagcgtttagattagattgaacaggtctcttctagtttaaccaaggttctgg-ttcgaatccaactttggacatgcaacaacgttaaaattct 35707923  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||| | |||| ||||||| | |   ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35707924 tagggagaacttgcctcccatttagatcctacaatgctcgagggattagtctctgcagttgcgcgtggaggatacccggttta 35708006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 181 - 360
Target Start/End: Complemental strand, 42741972 - 42741790
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatcc-agccttgggcat----gcagcagtgttaaaact 275  Q
    ||||||||  |||||||||||||||||||||||||||| ||||||||| ||| | |||||||||   || ||  | |||    |||||||||||||||||    
T  42741972 ccaagagcgtttagatgagatggaacaggtctcttctatcttaaccaatgtcctaggttcgaatattagtctccg-catttgcgcagcagtgttaaaact 42741874  T
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
     ||||||||| |||||| |||||||||||  || ||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  42741873 tttagggagaacctgccacccatttgggtc-cataatactcgagggattaatctctgcagttgcgcgcggaggatacccgattta 42741790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 179 - 301
Target Start/End: Complemental strand, 40099434 - 40099312
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||| ||| || ||  |||||||||||| ||||  |||||||||  |||||||||||    
T  40099434 acccgagagcgcttagatgagatggaacgggtctcttctagcttaactaagatcctgaattcgaatccagctttggatatgcagcagcattaaaactctt 40099335  T
Q  279 agggagagcctgccgcccatttg 301  Q
    ||||||||| |||||||||||||    
T  40099334 agggagagcttgccgcccatttg 40099312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 229 - 357
Target Start/End: Original strand, 24172236 - 24172366
Alignment:
Q  229 ggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct--tagggagagcctgccgcccatttgggtttcacaatgctcgagggattag 326  Q
    |||| |||||||||||||| ||||||||||||| ||  |||||||||||  ||| |||||| ||||||||| |||| |  |||||||||||| |||||||    
T  24172236 ggtcctgggttcgaatccaaccttgggcatgcaacaacgttaaaactctcttagtgagagcttgccgcccacttggatcccacaatgctcgaaggattag 24172335  T
Q  327 tctctgcagttgcgcgcggaggatacccggt 357  Q
    ||| ||||||||||||||||| |||||||||    
T  24172336 tctatgcagttgcgcgcggagtatacccggt 24172366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 191 - 330
Target Start/End: Complemental strand, 27484199 - 27484060
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||||  ||| |||||||||||||||||||||||| || |||  ||||||||| |||||||||||||| |||||||||||| |||||||| |     
T  27484199 ttagatgagatgacacaagtctcttctagcttaaccaaggtcctgagtttaaatccagccatgggcatgcagcagcgttaaaactcttggggagagcttt 27484100  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
    ||  | |||||||| |||| ||||| ||||||||| ||||    
T  27484099 ccatcgatttgggtctcacgatgcttgagggattaatctc 27484060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 363
Target Start/End: Original strand, 20207480 - 20207660
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| |||||||||||||  |  | | |||||||||||||| ||| |  ||||||| ||| ||||||| |||||| | ||  ||||||||||||| |    
T  20207480 caagagcgcttagatgagatgatatggatttcttctagcttaactaagatt-tgggttctaattcagccttaggcatgtaacaacgttaaaactcttaag 20207578  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||| |||||| ||||||| |   ||||||||||||||||||||||| |||||||||| | |||||||| ||||||||||    
T  20207579 gagagcttgccgcgcatttggatcctacaatgctcgagggattagtctccgcagttgcgcacagaggatactcggtttacac 20207660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 179 - 329
Target Start/End: Complemental strand, 7265475 - 7265325
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||  ||| ||||||||  || ||||||||||||||||||||| ||  |||||||| ||| || ||||||||||||||  |||||||||||||    
T  7265475 acccaagagcgtttatatgagatgacacgggtctcttctagcttaaccaaagttttgggttcggatctagtcttgggcatgcagcgatgttaaaactctt 7265376  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtct 329  Q
    ||||||||  ||| || |||||||||  |||||| |||||  |||||||||    
T  7265375 agggagagtttgctgctcatttgggtcccacaatactcgaatgattagtct 7265325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 181 - 290
Target Start/End: Complemental strand, 2657996 - 2657887
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||| |||||||||||||||||  |||||||||| ||||| ||||| | || |||| ||| |||||||||||||||||||  |||||||||||||     
T  2657996 ccaagagcgcttagatgagatggaacgagtctcttctaacttaatcaaggccctgagttcaaatacagccttgggcatgcagcaacgttaaaactcttaa 2657897  T
Q  281 ggagagcctg 290  Q
    ||||||||||    
T  2657896 ggagagcctg 2657887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 14545000 - 14545070
Alignment:
Q  257 atgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagt 327  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| ||||||||    
T  14545000 atgcagcagtgttaaaactcttagggagagcctgccgtccatttgggtcccacaatgctcgatggattagt 14545070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 271 - 360
Target Start/End: Complemental strand, 37339803 - 37339714
Alignment:
Q  271 aaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||||| ||||| |||||||| ||||||||  || ||||||||||||||||||||| |||||||||| ||||||||||||| ||||    
T  37339803 aaactcttagtgagagtctgccgcctatttgggtcccataatgctcgagggattagtctccgcagttgcgcacggaggatacccgattta 37339714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 285
Target Start/End: Complemental strand, 7190519 - 7190415
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    ||||||||  ||||||||||||||| |  ||||||||||||||||||||||  || ||| |||| |||| ||||||||||||| ||||||||||| ||||    
T  7190519 ccaagagcgtttagatgagatggaataaatctcttctagcttaaccaaggttatgagtttgaattcagcattgggcatgcagccgtgttaaaacttttag 7190420  T
Q  281 ggaga 285  Q
    |||||    
T  7190419 ggaga 7190415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 220 - 363
Target Start/End: Complemental strand, 23933772 - 23933629
Alignment:
Q  220 cttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgag 319  Q
    |||||| |||||| ||||||||||||||| |||| || ||||  ||  |||||||| ||||||||||  |||||||||||| ||||  ||||| || |||    
T  23933772 cttaactaaggtcctgggttcgaatccagtcttgagcttgcaagagcattaaaacttttagggagagtttgccgcccatttaggttcgacaatacttgag 23933673  T
Q  320 ggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||||||| |||| | | ||||||||||  |||||||    
T  23933672 ggattagtctctgcaattgcacacagaggatacccaatttacac 23933629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 28665197 - 28665253
Alignment:
Q  307 cacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  28665197 cacaatgctcgagggattagtctccgcagttgcacgcggaggatacccagtttacac 28665253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 276 - 360
Target Start/End: Original strand, 31776494 - 31776578
Alignment:
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||||||| || ||||||||||||  |||||| |||||||||||| |||  ||||||||| |||||||||||| ||||||    
T  31776494 cttagggagagccagctgcccatttgggtcccacaatactcgagggattaatcttcgcagttgcgggcggaggatacctggttta 31776578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 190 - 339
Target Start/End: Complemental strand, 4059843 - 4059695
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 289  Q
    ||||||||| |||  ||| ||||||| ||| |||||||||||| || |||||||| |||||||| ||||||| ||  |||||||||||||| |||||  |    
T  4059843 cttagatgacatgacacatgtctcttttagtttaaccaaggtc-tgagttcgaatacagccttgagcatgcaacatcgttaaaactcttagagagagttt 4059745  T
Q  290 gccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgc 339  Q
     |||   ||||||||  |||||  |||||||||||||||| || ||||||    
T  4059744 tccgtttatttgggtcacacaagactcgagggattagtctatgaagttgc 4059695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 36821113 - 36821060
Alignment:
Q  308 acaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttac 361  Q
    |||||||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  36821113 acaatgctcgagggattagtctctgcagttgcgcgcagaggatacttggtttac 36821060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 339
Target Start/End: Complemental strand, 24579584 - 24579456
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    ||||||||||| |||||||||||  || |||||||| |||| ||  |||||||||| || |||||| |||||||||||  ||||| |||||||| |   |    
T  24579584 gtctcttctagtttaaccaaggttctgagttcgaattcagctttacgcatgcagcattgataaaacacttagggagag--tgccgtccatttggatccta 24579487  T
Q  309 caatgctcgagggattagtctctgcagttgc 339  Q
     ||  |||||| |||||||||||||||||||    
T  24579486 gaagactcgagagattagtctctgcagttgc 24579456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 276 - 363
Target Start/End: Complemental strand, 29428857 - 29428770
Alignment:
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||  ||||| |||||||| |  ||||||| ||||||||||||||||||||||||||| ||   ||||||||||| ||||    
T  29428857 cttagggagagtttgccgaccatttggatcccacaatgttcgagggattagtctctgcagttgcgctcgcctgatacccggttgacac 29428770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 286
Target Start/End: Original strand, 40211965 - 40212039
Alignment:
Q  212 tcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    |||| |||||||| ||||||| ||||||| ||||||| |||||||||||| ||  ||||||||||||||| ||||    
T  40211965 tcttttagcttaatcaaggtcatgggttcaaatccagtcttgggcatgcaacaacgttaaaactcttaggaagag 40212039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 225 - 363
Target Start/End: Original strand, 45778889 - 45779027
Alignment:
Q  225 ccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggatt 324  Q
    |||| ||| ||||||||||| ||| ||||| ||| || | |||||||| || |||||||  |  || || || |||| || ||||||| |||||||||||    
T  45778889 ccaatgtcatgggttcgaattcagtcttggacatacaacggtgttaaagcttttagggattgtttgtcgtccgtttgagtctcacaatactcgagggatt 45778988  T
Q  325 agtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||| |||||||||   |||||||||| |||||||||    
T  45778989 agtctccgcagttgcgaatggaggatacctggtttacac 45779027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 260 - 341
Target Start/End: Complemental strand, 4562859 - 4562778
Alignment:
Q  260 cagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgc 341  Q
    |||||||||||||||||||||| ||| | | ||| ||||||  || |||||||| | ||| ||||||| |||||||||||||    
T  4562859 cagcagtgttaaaactcttaggaagaacttaccgtccatttaagtctcacaatgtttgagagattagtgtctgcagttgcgc 4562778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 30614772 - 30614683
Alignment:
Q  251 ttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcg 340  Q
    ||||||||||| ||| |||||||||||||| |||||  || ||| ||||| ||| ||| || ||| |||| ||||||||| |||||||||    
T  30614772 ttgggcatgcatcagcgttaaaactcttagagagagtttgtcgctcatttaggtctcagaaagcttgaggaattagtctcggcagttgcg 30614683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 270 - 360
Target Start/End: Original strand, 32469986 - 32470078
Alignment:
Q  270 aaaactcttagggagagcctgccgcccatttgggtttcacaat--gctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||| ||||||||| | ||||| |||||||||| |||||||  ||||||| ||||||| |  |||||||| ||||||||||| | ||||||    
T  32469986 aaaacttttagggagaacttgccgtccatttgggtctcacaatatgctcgagagattagtgttcgcagttgcacgcggaggatatctggttta 32470078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 190 - 278
Target Start/End: Original strand, 5905812 - 5905900
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||||| ||||  |||||||||| ||||||||| ||| | || | |||||||   |||||||||||||||  |||||||||||    
T  5905812 cttagatgagatagaacgagtctcttctaacttaaccaacgtcttaggcttgaatccaatattgggcatgcagcagcattaaaactctt 5905900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 18038150 - 18038002
Alignment:
Q  214 ttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcac-aat 312  Q
    ||||| ||||||||| ||| || ||||||||| | | || |||||||||||| ||||| ||||||||| ||||  |  ||| |||||| || |||| ||     
T  18038150 ttctaacttaaccaatgtcttgtgttcgaatctaactttaggcatgcagcagcgttaagactcttaggcagagtttatcgctcatttgagtctcactaaa 18038051  T
Q  313 gctcgagggattagtctctgcagttgcgcgcggaggatacccggtttac 361  Q
     |||||| |||||||||  ||| ||||||||||| || ||||| |||||    
T  18038050 tctcgagagattagtcttcgcaattgcgcgcggatgacacccgatttac 18038002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 343
Target Start/End: Original strand, 1424590 - 1424716
Alignment:
Q  217 tagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctc 316  Q
    |||||||||||||||  ||||||||||||||   |||| || |||  |||||||||||||||  |||||| ||   |  |||||||||  |||||  ||     
T  1424590 tagcttaaccaaggtgttgggttcgaatccattattggacaagcaatagtgttaaaactcttgaggagagtctcttgttcatttgggtcccacaagactt 1424689  T
Q  317 gagggattagtctctgcagttgcgcgc 343  Q
    ||| |||||||||| ||||||||||||    
T  1424690 gagagattagtctccgcagttgcgcgc 1424716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 212 - 278
Target Start/End: Complemental strand, 2871104 - 2871038
Alignment:
Q  212 tcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||| ||||||||||||  |||||| ||||||| |||| | |||||| || |||||||||||||    
T  2871104 tcttctaacttaaccaaggttctgggtttgaatccatccttagacatgcaacaatgttaaaactctt 2871038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 3231287 - 3231381
Alignment:
Q  268 ttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    |||||||| ||||||||||| || |  |||||| |||  ||||||| ||||| |||||| |||  ||||||  ||||||||||||||| ||||||    
T  3231287 ttaaaacttttagggagagcttgtcttccatttaggtcccacaatgttcgagagattagactcaccagttgtacgcggaggatacccgatttaca 3231381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 5546679 - 5546745
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatcca 247  Q
    |||||||| |||| ||||||||  | | |||||||||||||||| |||||| |||| ||||||||||    
T  5546679 ccaagagcgcttaaatgagatgacataagtctcttctagcttaatcaaggttgtggattcgaatcca 5546745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 211 - 281
Target Start/End: Original strand, 12142637 - 12142707
Alignment:
Q  211 ctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    |||||||| ||||||||| ||| | ||||||||| | | | |||||||||||||  |||||||||||||||    
T  12142637 ctcttctaacttaaccaaagtccttggttcgaattcggtcatgggcatgcagcatcgttaaaactcttagg 12142707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Complemental strand, 49118277 - 49118227
Alignment:
Q  313 gctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||||||||  |||| | || ||||||||||||||    
T  49118277 gctcgagggattagtctctgcagttttgcgcagtggttacccggtttacac 49118227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 179 - 276
Target Start/End: Original strand, 2371127 - 2371224
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactc 276  Q
    |||||||||  |||||||||||||  || | |||||||||| || || |||||| ||  ||||||| ||| ||| || ||||||||| ||||||||||    
T  2371127 acccaagagtgcttagatgagatgacacggttctcttctagattgactaaggtcctgaattcgaattcaggcttaggaatgcagcagcgttaaaactc 2371224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 304
Target Start/End: Original strand, 24512617 - 24512730
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||| |||  || |||||||||||| |||||||| ||| ||  ||||||| || |||||| ||| || ||  |||||||||||| |||||||  ||    
T  24512617 ttagatgaaatgacacgggtctcttctagtttaaccaatgtcctgaattcgaatacaaccttggacatccaacaacgttaaaactcttggggagagtgtg 24512716  T
Q  291 ccgcccatttgggt 304  Q
     || ||||||||||    
T  24512717 acgtccatttgggt 24512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 37900503 - 37900434
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||| ||| |||||||| ||| ||||||| |||| | |||| | ||||||||| |||||||||||||    
T  37900503 gtctcttttagtttaaccaaagtcatgggttcaaatcaaaccttagacatgcagcaatgttaaaactctt 37900434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Complemental strand, 37907014 - 37906945
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||| ||| |||||||| ||| ||||||| |||| | |||| | ||||||||| |||||||||||||    
T  37907014 gtctcttttagtttaaccaaagtcatgggttcaaatcaaaccttagacatgcagcaatgttaaaactctt 37906945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 21411756 - 21411644
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    |||||||||| |||||| |||||  || |||||||| |||  ||| |||||||| || ||||||||||||||  ||| | || |||| |||| |||| ||    
T  21411756 gtctcttctaacttaacgaaggttttgagttcgaattcagatttgagcatgcagtagcgttaaaactcttagaaagaacttgtcgcctatttaggttcca 21411657  T
Q  309 caatgctcgaggg 321  Q
    ||| | |||||||    
T  21411656 caaggttcgaggg 21411644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 32469921 - 32469981
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagcct 251  Q
    ||||||||||||||||  |||||||||||||||| |||| |  || ||||||||| |||||    
T  32469921 ttagatgagatggaacgagtctcttctagcttaatcaagattttgagttcgaatcaagcct 32469981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 33299174 - 33299242
Alignment:
Q  295 ccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||| || |||||||||  | ||||||||||| ||||||  ||| |||| |||||||||||||||    
T  33299174 ccatttggattccacaatgcttaatggattagtctccgcagttatgcgtggagaatacccggtttacac 33299242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 331
Target Start/End: Complemental strand, 46567708 - 46567568
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||||  | |||||| || || ||||| ||||||| |||||| |||| || | ||   |||||| || | ||||||||||||   ||||| |     
T  46567708 ttagatgagatgacataggtcttttttaacttaatcaaggtcttgggtttgaatacaactttaaacatgcaacaatattaaaactcttacaaagagctta 46567609  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctct 331  Q
    ||| ||||||  ||||||||||||||||| |||| ||||||    
T  46567608 ccgtccatttaagtttcacaatgctcgagagatttgtctct 46567568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 154; Significance: 2e-81; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 178 - 363
Target Start/End: Original strand, 10591905 - 10592090
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10591905 aacccaagagcacttagatgagatggaacgggtctcttctagattaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactct 10592004  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10592005 tagggagagtctgccgcccatttgagtcccacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccgatttacac 10592090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 241 - 363
Target Start/End: Complemental strand, 5123598 - 5123476
Alignment:
Q  241 gaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcg 340  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  5123598 gaattcagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcg 5123499  T
Q  341 cgcggaggatacccggtttacac 363  Q
    |||||||||||||| ||||||||    
T  5123498 cgcggaggataccctgtttacac 5123476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 360
Target Start/End: Complemental strand, 30785148 - 30784967
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||| ||| ||| |||||||||||||||| |||| |||||||||  ||||||||||||    
T  30785148 acccaagagcatttagatgagatggaacgagtctcttctagcttaatcaatgtcttgggttcgaatccagctttggacatgcagcaacgttaaaactctt 30785049  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||  |||||  |||||| ||| |||||||| || ||||||||||||| |||||||||||||||||||||| ||||||    
T  30785048 agggagaatctgccatccatttaggtctcacaatgttcaagggattagtctccgcagttgcgcgcggaggatacctggttta 30784967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 191 - 363
Target Start/End: Original strand, 31113325 - 31113497
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||||||| ||| ||||| || ||||||||  |||||  | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  31113325 ttagatgagatgaaacgggtcttttttagcttaattaaggttctaggttcgaattcagccttgggcatgcagcagtgttaaaactcttagggagagccta 31113424  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||| |  |||||| ||||||||||||||||| ||||||||||||| |||||||||| |||||||    
T  31113425 ccgcccatttggatcccacaatactcgagggattagtctccgcagttgcgcgcgaaggatacccgatttacac 31113497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 190 - 363
Target Start/End: Complemental strand, 22188147 - 22187976
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 289  Q
    |||||||||||| ||||   ||||||||| ||||||||||||  |||||| |||||||||||||||||| || ||| ||||||||||||  |||||| ||    
T  22188147 cttagatgagattgaacgaatctcttctaacttaaccaaggtattgggtttgaatccagccttgggcatacaacagcgttaaaactctt--ggagagtct 22188050  T
Q  290 gccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||| ||||||||  |||||| || |||||||||||||| ||||||||||||||||||||||||| ||||||    
T  22188049 gccgcctatttgggtcccacaatactagagggattagtctccgcagttgcgcgcggaggatacccggcttacac 22187976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 178 - 336
Target Start/End: Complemental strand, 2798477 - 2798320
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    |||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||  |||||||||||||| ||||| ||||||||||| ||||||||| |    
T  2798477 aacccaagagcagttagatgagatgaaac-ggtttcttctagcttaaccaaggttctgggttcgaatccaaccttgagcatgcagcagcgttaaaacttt 2798379  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagt 336  Q
    |||||||||| | |||||||||||| ||  ||||||||| || ||||| ||||||||||    
T  2798378 tagggagagcttaccgcccatttggtttctacaatgctctagagattaatctctgcagt 2798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 178 - 336
Target Start/End: Complemental strand, 2804644 - 2804487
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    |||||||||||| |||||||||||| ||| ||| ||||||||||||||||||||  |||||||||||||| ||||| ||||||||||| ||||||||| |    
T  2804644 aacccaagagcagttagatgagatgaaac-ggtttcttctagcttaaccaaggttttgggttcgaatccaaccttgagcatgcagcagcgttaaaacttt 2804546  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagt 336  Q
    |||||||||| | |||||||||||| ||  ||||||||| || ||||| ||||||||||    
T  2804545 tagggagagcttaccgcccatttggtttctacaatgctctagagattaatctctgcagt 2804487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 18909457 - 18909313
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| |||||||||||| |||| |||   ||||||||||| ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||    
T  18909457 caagagcgcttagatgagatagaacgggt---ttctagcttaatcaaggtcctaggttcgaatccagccttgggtatgcagcagtgttaaaactcttagg 18909361  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagtct 329  Q
    ||||   |||||| ||||||  |  |||||||||||||||||||||||    
T  18909360 gagaatttgccgctcatttgaatcccacaatgctcgagggattagtct 18909313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 290
Target Start/End: Complemental strand, 28023605 - 28023494
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||| ||| || |||||||||||||||| |||||  || |||||||||||| ||    
T  28023605 acccaagagcgcttagatgagatggaacggatctcttctagcttaaccaatgtcctgagttcgaatccagccttaggcatatagtagtgttaaaactttt 28023506  T
Q  279 agggagagcctg 290  Q
    ||||||||||||    
T  28023505 agggagagcctg 28023494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 218 - 355
Target Start/End: Original strand, 35774603 - 35774740
Alignment:
Q  218 agcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcg 317  Q
    |||||||| || ||| || ||||||||  |||||||| |||||| || ||||||||| |||||||||||| |||||| |||||| || ||||||| ||||    
T  35774603 agcttaactaaagtcttgagttcgaatttagccttggacatgcaacaatgttaaaacacttagggagagcttgccgcacatttgagtctcacaatactcg 35774702  T
Q  318 agggattagtctctgcagttgcgcgcggaggatacccg 355  Q
    | | |||| ||||  ||||||| |||||| ||||||||    
T  35774703 atgaattaatctcctcagttgcacgcggaagatacccg 35774740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 363
Target Start/End: Original strand, 25983742 - 25983828
Alignment:
Q  277 ttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||| ||||||||||||| ||  || |||| ||||| |||||||||| |||||||| | |||||||||||||||||||||    
T  25983742 ttagggagagcttgccgcccatttgagtcccataatgttcgagtgattagtctccgcagttgcacacggaggatacccggtttacac 25983828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 362
Target Start/End: Original strand, 12682630 - 12682797
Alignment:
Q  195 atgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgc 294  Q
    |||||||| |||  |||||||||||||||| ||| ||  || ||||||||||||||||| ||||||| ||  |||||||||||| |||||| | || ||     
T  12682630 atgagatgaaacgagtctcttctagcttaagcaatgttctgagttcgaatccagccttgagcatgcaacaacgttaaaactcttcgggagaacttgtcgt 12682729  T
Q  295 ccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
     || |||  |  ||| ||  |||||| ||||||||  ||||||||||||||||||||| | |||||||    
T  12682730 tcaattgaatcccaccatattcgaggaattagtcttcgcagttgcgcgcggaggatactcagtttaca 12682797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 29553606 - 29553693
Alignment:
Q  267 gttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggataccc 354  Q
    ||||||||||||||||||||  || || ||||||||||  || ||||||| || |||||||||||||||||| ||| |||||||||||    
T  29553606 gttaaaactcttagggagagtttgtcgtccatttgggtcccagaatgctcaagagattagtctctgcagttgtgcgtggaggataccc 29553693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 266 - 337
Target Start/End: Original strand, 36212962 - 36213033
Alignment:
Q  266 tgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt 337  Q
    |||||||||||||||||||||  |||||||||||| |||  |||||||||||||||||| ||||| ||||||    
T  36212962 tgttaaaactcttagggagagtttgccgcccatttaggtcccacaatgctcgagggattggtctccgcagtt 36213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 351
Target Start/End: Complemental strand, 10795478 - 10795308
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||| | |||||||||||||  || | |||||||  |||||||||||||| |  |||| ||||||||||| |||||| |||||  ||||||||||     
T  10795478 acccaagaacgcttagatgagatgatacggatctcttc--gcttaaccaaggtcctaagttcaaatccagccttaggcatgaagcagcattaaaactcta 10795381  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggata 351  Q
    | |||||   ||||||||||||||||  |||||   | ||||||||||| |  | ||||||||| ||||||||    
T  10795380 aaggagaatgtgccgcccatttgggtcccacaaaatttgagggattagtgttcgtagttgcgcgtggaggata 10795308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 221 - 351
Target Start/End: Complemental strand, 12336148 - 12336018
Alignment:
Q  221 ttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagg 320  Q
    |||||||||||| ||| || |||| || | |||||||||||| ||||||||||||||||  ||| || ||| |  ||||| |||  |||||||||| |      
T  12336148 ttaaccaaggtcctggatttgaattcaacattgggcatgcagtagtgttaaaactcttaatgagggcttgctgttcattttggtcccacaatgctcaaaa 12336049  T
Q  321 gattagtctctgcagttgcgcgcggaggata 351  Q
     |||||| |||||||||||||| ||||||||    
T  12336048 aattagtttctgcagttgcgcgtggaggata 12336018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 304
Target Start/End: Complemental strand, 12487398 - 12487304
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggt 304  Q
    |||||||||||||||||||| ||| ||  ||| ||| ||||||| | |||||| ||  || |||||| ||||||||||| ||||||||||||||||    
T  12487398 gtctcttctagcttaaccaatgtcttgccttcaaattcagccttag-catgcaacatcgtcaaaacttttagggagagcttgccgcccatttgggt 12487304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 342
Target Start/End: Complemental strand, 32313238 - 32313105
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttc 307  Q
    |||||||| || ||||| ||||||| ||| || ||||||| | || |||| |||| |  ||||||||||||| ||||||  ||| ||||||||  ||       
T  32313238 ggtctcttataacttaatcaaggtcttggatttgaatccaactttcggcaagcagaac-gttaaaactcttaaggagagtttgctgcccatttaagtcct 32313140  T
Q  308 acaatgctcgagggattagtctctgcagttgcgcg 342  Q
    ||||| |||||||||||||||||| ||||||||||    
T  32313139 acaatactcgagggattagtctctacagttgcgcg 32313105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 339
Target Start/End: Original strand, 18244640 - 18244723
Alignment:
Q  256 catgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgc 339  Q
    ||||||||||  ||||||||||| ||||||   | || |||||||||||| |||||| || ||| |||||||||| ||||||||    
T  18244640 catgcagcagcattaaaactctttgggagatttttccacccatttgggttccacaatacttgagagattagtctccgcagttgc 18244723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 23422731 - 23422801
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 279  Q
    |||| ||||||||||||||||||| || | || |||| ||  ||||||||||||||  |||||||||||||    
T  23422731 gtcttttctagcttaaccaaggtcttgagatcaaatctagttttgggcatgcagcaaagttaaaactctta 23422801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 5051684 - 5051753
Alignment:
Q  295 ccatttgggtttcacaatgctcgagggattagtctctgc-agttgcgcgcggaggatacccggtttacac 363  Q
    ||||||| || |||||||||||||| ||||||| ||||| ||||||| || |||||| |||| |||||||    
T  5051684 ccatttgagtctcacaatgctcgagagattagtttctgcaagttgcgtgcagaggatgcccgatttacac 5051753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 150; Significance: 4e-79; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 178 - 363
Target Start/End: Complemental strand, 4125187 - 4125002
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||    
T  4125187 aacccaagagcacttagatgagatggaacgggtctcttctagcttaaccaatgtcctgggttcgaatcaagccttgggcatgcagcactgttaaaactct 4125088  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  4125087 tagggagagcctgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccgatttacac 4125002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 2743912 - 2744096
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2743912 acccaagagcatttagatgagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 2744011  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||| || || ||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2744012 agggagagcatgtcgtccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 2744096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 185 - 363
Target Start/End: Complemental strand, 19715882 - 19715703
Alignment:
Q  185 gagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggag 284  Q
    |||| |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  19715882 gagcgcttagatgagatggaacatgtcttttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagcgttaaaactctcagggag 19715783  T
Q  285 agcctgccgcccatttgggtttcacaatgctcga-gggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||| ||||||||||||||||  |||||||||||| |||||||||||| |||||||||||||||| ||||| |||||||||    
T  19715782 agcttgccgcccatttgggtcccacaatgctcgaggggattagtctccgcagttgcgcgcggagaatacctggtttacac 19715703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 179 - 360
Target Start/End: Original strand, 30935983 - 30936164
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||  ||||||||||  ||||||||||||    
T  30935983 acccaagagcacttagatgagatggaacgggtctcttctaacttaaccaaggtcctgagttcgaatccagccttaagcatgcagcaacgttaaaactctt 30936082  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||| ||||||||||||||| | |||||||||||    
T  30936083 agggagagcctgccgcccatttgggtccgacaatgttcgagggattagtctccgcagttgcgcgcggatgttacccggttta 30936164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 191 - 363
Target Start/End: Complemental strand, 13468895 - 13468723
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||| |||    
T  13468895 ttagattagatggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgtagcagcgttaaaactcttagagagagtctg 13468796  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||| ||  |||||||||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  13468795 ccgcccatttgagtcccacaatgctcgaaggattagtctccgcagttgcgcacggaggatacccggtttacac 13468723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 179 - 349
Target Start/End: Complemental strand, 12958247 - 12958077
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||    
T  12958247 acccaagagtgcttagatgagatggaactagtctcttctagcttaaccaaggtcatgggtttgaatccagcattgggcatgcagcagcgttaaaactctt 12958148  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggagga 349  Q
    |||||||||||| |||||||||||||  |||||||||||||||||||||||| ||||| ||||||||||||    
T  12958147 agggagagcctgtcgcccatttgggtcccacaatgctcgagggattagtctccgcagtagcgcgcggagga 12958077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 191 - 351
Target Start/End: Complemental strand, 30056151 - 30055991
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  30056151 ttagatgagatggaacatgtctcttctagcttaacgaaggtcatgggttcaaatccagccttaggcatgcagcagcattaaaactcttagggagagcctg 30056052  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggata 351  Q
    ||| ||||||||||| |||||||||||||||||||||||||  ||||||| |||| |||||    
T  30056051 ccgtccatttgggttccacaatgctcgagggattagtctctttagttgcgtgcgggggata 30055991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 179 - 361
Target Start/End: Complemental strand, 36994662 - 36994478
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||| |||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  36994662 acccaagagcgcttagataagatggcacatgtctcttctagtttaaccaaggtcctgggttcgaatccagccttggacatgcagcagcgttaaaactctt 36994563  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttg--cgcgcggaggatacccggtttac 361  Q
    | ||||||  ||| ||||||||||||  ||||| ||||||||||||||||||||||||||  || || | |||||||||||||||    
T  36994562 aaggagagtttgctgcccatttgggtcccacaaggctcgagggattagtctctgcagttgcacgtgcagtggatacccggtttac 36994478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 199 - 333
Target Start/End: Original strand, 15682928 - 15683062
Alignment:
Q  199 gatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccat 298  Q
    ||||||||  |||||||||||||||| ||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15682928 gatggaacgagtctcttctagcttaatcaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagggagagcctgccgcccat 15683027  T
Q  299 ttgggtttcacaatgctcgagggattagtctctgc 333  Q
    || |||  ||||||||||||||||||| |||||||    
T  15683028 ttaggtcccacaatgctcgagggattaatctctgc 15683062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 7839343 - 7839238
Alignment:
Q  251 ttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggat 350  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  7839343 ttgggcatgcagcagctttaaaactcttagggagagcatgccgcccatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggat 7839244  T
Q  351 acccgg 356  Q
    ||||||    
T  7839243 acccgg 7839238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 190 - 314
Target Start/End: Original strand, 35206990 - 35207114
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 289  Q
    ||||||||||||| ||||||||||||||| |||||||||| |  |||||||||||  | |||||| |||||||||| ||||||||||||| ||| ||| |    
T  35206990 cttagatgagatgaaacaggtctcttctaacttaaccaagattctgggttcgaatttaaccttggacatgcagcagcgttaaaactcttaaggaaagcat 35207089  T
Q  290 gccgcccatttgggtttcacaatgc 314  Q
    | || ||||||||||  ||||||||    
T  35207090 gtcgtccatttgggtcccacaatgc 35207114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 44705653 - 44705725
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttg 253  Q
    ||||||||  ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  44705653 ccaagagcgtttagatgggatggaacaggtctcttctagtttaaccaaggtcttgggttcgaatccagccttg 44705725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 236 - 360
Target Start/End: Original strand, 24988530 - 24988659
Alignment:
Q  236 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggag-----agcctgccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
    |||| ||||||||||||||||||||||||||| |||||||||| |||||     ||| |||||| |||||| ||  |||||| |||||||||||||||||    
T  24988530 ggtttgaatccagccttgggcatgcagcagtgctaaaactcttggggaggggatagcttgccgctcatttgagtcccacaatactcgagggattagtctc 24988629  T
Q  331 tgcagttgcgcgcggaggatacccggttta 360  Q
     ||| ||||||   |||||||||| |||||    
T  24988630 cgcaattgcgcattgaggatacccagttta 24988659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 363
Target Start/End: Original strand, 39086859 - 39086915
Alignment:
Q  307 cacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  39086859 cacaatgctcgagggattagtctccgcagttgcacgcggaggatacctggtttacac 39086915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 27121883 - 27121804
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagc 287  Q
    ||||||||||||||||||||| ||  |||||||||||||||| ||  ||||||| ||||||||||||| ||||| |||||    
T  27121883 ggtctcttctagcttaaccaaagttctgggttcgaatccagctttaagcatgcaacagtgttaaaacttttaggaagagc 27121804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 181 - 360
Target Start/End: Original strand, 44638964 - 44639143
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||| | ||||| |||||| | ||| |||||||||| ||||| ||||||| ||  || ||||||| ||||| ||||||| ||  ||||||||||||||    
T  44638964 ccaagaacgcttaggtgagattgcacatgtctcttctaacttaatcaaggtcctgaatttgaatccaaccttgagcatgcaacaacgttaaaactcttag 44639063  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||  |||||| |||||| |   |||||| || | | ||||||||| | || ||||  ||||| |||||||||||||    
T  44639064 ggagagtttgccgcacatttgagccccacaatacttgggagattagtctttacaattgcatgcggatgatacccggttta 44639143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 39086797 - 39086850
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtc 232  Q
    |||||||||| ||||||||||||||||| || ||||||||||||||||||||||    
T  39086797 acccaagagcgcttagatgagatggaacgggcctcttctagcttaaccaaggtc 39086850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 363
Target Start/End: Complemental strand, 16701512 - 16701358
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttc 307  Q
    ||||||||||| |||||| |||||  ||||||||||||||||||||| ||| ||| ||  ||||| |||||||||||||  ||  ||||||||| ||  |    
T  16701512 ggtctcttctatcttaactaaggttctgggttcgaatccagccttggacatacagtagctttaaacctcttagggagagtttgtagcccatttgagtccc 16701413  T
Q  308 acaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||   ||||| |||||||||| |||  | || | ||||||||| ||||||||||    
T  16701412 acaagattcgagagattagtctccgcaagt-cgtgaggaggatacacggtttacac 16701358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 179 - 257
Target Start/End: Complemental strand, 13005831 - 13005753
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggca 257  Q
    |||||||||| ||||| |||||||  ||| ||||||||||||||| |||||||| ||||||  ||||||||||| ||||    
T  13005831 acccaagagcgcttagctgagatgtcacatgtctcttctagcttatccaaggtcttgggtttaaatccagccttcggca 13005753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 212 - 358
Target Start/End: Original strand, 28377670 - 28377815
Alignment:
Q  212 tcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaa 311  Q
    |||| |||||||| ||| ||| || ||||||||||||| || |||||||||||   |||||| ||||||||||||  ||||| | |||| | |   ||||    
T  28377670 tcttttagcttaatcaaagtcatgagttcgaatccagcattaggcatgcagcaacattaaaattcttagggagagtttgccgtctattt-gatgcgacaa 28377768  T
Q  312 tgctcgagggattagtctctgcagttgcgcgcggaggatacccggtt 358  Q
    |||||| ||||||||||||  ||||| ||||||||| ||| ||||||    
T  28377769 tgctcgcgggattagtctcatcagttacgcgcggagtatatccggtt 28377815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 304
Target Start/End: Complemental strand, 32422923 - 32422809
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggca-tgcagcagtgttaaaactcttagggagagcct 289  Q
    ||||||||||||  ||| |||||||| | |||||||||| || |||  |||||| ||  |||||||| |||||||||||||||||| || ||||||   |    
T  32422923 ttagatgagatgacacaagtctcttcaaccttaaccaagatcctggaatcgaattcaatcttgggcaatgcagcagtgttaaaactttttgggagaaatt 32422824  T
Q  290 gccgcccatttgggt 304  Q
    |||||||||||||||    
T  32422823 gccgcccatttgggt 32422809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 208 - 329
Target Start/End: Original strand, 21032305 - 21032425
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttc 307  Q
    |||||||| || |||||||||  || | ||||| ||||||||||| ||||||||| || ||| ||||| ||||||||||  ||||||  ||||| ||       
T  21032305 ggtctcttgtaacttaaccaatatcataggttcaaatccagcctttggcatgcag-agcgtttaaactattagggagagtttgccgcttatttgagtact 21032403  T
Q  308 acaatgctcgagggattagtct 329  Q
    ||||||||||||||||||||||    
T  21032404 acaatgctcgagggattagtct 21032425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 280 - 363
Target Start/End: Original strand, 8521778 - 8521860
Alignment:
Q  280 gggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||| |||  ||||||||| ||  ||||||||||||||||||||| ||  |||||||||||||| |||||||| |||||||    
T  8521778 gggagagtctgatgcccatttgagtcccacaatgctcgagggattagtatc-ccagttgcgcgcggaagatacccgatttacac 8521860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 33404444 - 33404376
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatcca 247  Q
    |||||||||| |||||||||||||  ||| ||||||| ||||| |||||| ||| |||||| |||||||    
T  33404444 acccaagagcgcttagatgagatgacacaagtctcttatagctcaaccaaagtcatgggtttgaatcca 33404376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 182 - 330
Target Start/End: Complemental strand, 23981632 - 23981482
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| ||||||| |||||  ||  ||||||| ||||||||| | |||  ||| ||||||| |||| |||| ||||||| |  ||||||||||||||     
T  23981632 caagagcgcttagatcagatgacacgagtctcttttagcttaactagggttctggattcgaattcagctttggacatgcaggaacgttaaaactcttaga 23981533  T
Q  282 g--agagcctgccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
    |  ||||  |||| |||||||||||   |||| |||||||| |||||||||    
T  23981532 gaaagagtttgccacccatttgggtcgtacaaggctcgaggaattagtctc 23981482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 29284966 - 29285017
Alignment:
Q  261 agcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaat 312  Q
    ||||||||||||||||||| ||||||| ||| | ||||||||||| ||||||    
T  29284966 agcagtgttaaaactcttatggagagcttgcagtccatttgggttccacaat 29285017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 300
Target Start/End: Original strand, 10030944 - 10031058
Alignment:
Q  186 agcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggaga 285  Q
    |||| |||||| ||||| |||  || ||||||| |||||||||  |  || |||||||||  || |||| ||| || ||  |||||||||||||||||||    
T  10030944 agcatttagataagatgaaacgagtttcttctaacttaaccaaaattctgagttcgaatcttgcattggacatccaacaacgttaaaactcttagggaga 10031043  T
Q  286 gcctgccgcccattt 300  Q
    || ||||||||||||    
T  10031044 gcttgccgcccattt 10031058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 191 - 287
Target Start/End: Complemental strand, 4321654 - 4321558
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagc 287  Q
    ||||||||||||  | || | |||||||||||||  |||||  |||||| |||||||| ||| | ||||||  |  |||||||||||||||||||||    
T  4321654 ttagatgagatgacatagatttcttctagcttaagtaaggttctgggtttgaatccagtcttagacatgcaataacgttaaaactcttagggagagc 4321558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 286
Target Start/End: Complemental strand, 8878210 - 8878150
Alignment:
Q  226 caaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    |||||||  ||||||||||||||| || |||||||| ||  ||||||||||||||| ||||    
T  8878210 caaggtctcgggttcgaatccagctttaggcatgcaacaacgttaaaactcttaggaagag 8878150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 11363259 - 11363354
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    ||||||||||||| ||||  ||||||||| ||||||||| ||  || ||| |||| ||||||||  |||||| ||  |||||||||| |||||||||    
T  11363259 cttagatgagatgaaacaaatctcttctaacttaaccaa-gtattgagtttgaattcagccttgaacatgcaacatcgttaaaactcctagggagag 11363354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 4e-73; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 179 - 362
Target Start/End: Complemental strand, 42745278 - 42745095
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  42745278 acccaagagcgcttagatgagatggaacgggtctcttatagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaatgttaaaactctt 42745179  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    |||||||| |||| ||| ||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  42745178 agggagagtctgctgcctatttgggttccacaatggtcgagggattagtctcagcagttgcgcgcggaggatacccggtttaca 42745095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 183 - 363
Target Start/End: Original strand, 5394380 - 5394559
Alignment:
Q  183 aagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttaggg 282  Q
    |||||| |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5394380 aagagcgcttagatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagca-tgttaaaactcttaggg 5394478  T
Q  283 agagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||| |||||||||||| || |||||||    
T  5394479 agagcctgccgcccatttgggtcccacaatgctcgtgggattagtctccgcagttgcacgcggaggatactcgatttacac 5394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 179 - 362
Target Start/End: Complemental strand, 31579391 - 31579208
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||| ||    
T  31579391 acccaagagcacttagatgagatgtaacgggtctcttctagcttaatcaaggtcttgggttcgaatccagccttgggcatgcaacagtgttaaaactttt 31579292  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    |||||||| |||||||||||||  ||  |||||||||||||| |||||| || |||||||||||||||||||||||||||||||    
T  31579291 agggagagtctgccgcccatttaagtcccacaatgctcgaggaattagtttccgcagttgcgcgcggaggatacccggtttaca 31579208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 178 - 360
Target Start/End: Complemental strand, 18105525 - 18105344
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    |||| |||||| |||| ||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||  ||||||| |||    
T  18105525 aacctaagagcgcttatatgagatggaacgagtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcaacaacgttaaaattct 18105426  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    || ||||||||||||||||||||| || ||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18105425 tatggagagcctgccgcccatttgagtctcacaatactcgagggattagtctc-gcagttgcgcgcggaggatatccggttta 18105344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 179 - 298
Target Start/End: Complemental strand, 44732735 - 44732616
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  44732735 acccaagagcacttagatgagatggaacgggtctcttatagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 44732636  T
Q  279 agggagagcctgccgcccat 298  Q
    ||||||||||||||||||||    
T  44732635 agggagagcctgccgcccat 44732616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 179 - 351
Target Start/End: Complemental strand, 9438298 - 9438126
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||  ||||||||||||||||   |||||| |||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||    
T  9438298 acccaagagcgtttagatgagatggaacgaatctcttttagcttaaccaaagtctttggttcgaatccagccttgggcatgcagcagggttaaaactctt 9438199  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggata 351  Q
    ||| ||| ||||||||||||||| ||  ||||||||| ||||||||||| ||  |||||||||||||||||||    
T  9438198 aggaagaacctgccgcccatttgtgtcccacaatgcttgagggattagtttccacagttgcgcgcggaggata 9438126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 179 - 304
Target Start/End: Complemental strand, 12133392 - 12133267
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| |||||||||||||||||  |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||  ||||||||||||    
T  12133392 acccaagagcgcttagatgagatggaacgagtctcttctagcttaatcaaggtcatgggttcgaatccagccttggacatgcagcaacgttaaaactctt 12133293  T
Q  279 agggagagcctgccgcccatttgggt 304  Q
    ||||||||||||||| ||||||||||    
T  12133292 agggagagcctgccgtccatttgggt 12133267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 179 - 360
Target Start/End: Original strand, 17981477 - 17981657
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||| ||| |||||||||||||||||  |||||||||||||||||||| ||| ||  ||  ||||||| |||||||||||| ||   |||||||||||    
T  17981477 acccaatagcgcttagatgagatggaacgagtctcttctagcttaaccaaagtcctgaatttaaatccagtcttgggcatgcaacaacattaaaactctt 17981576  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||| ||||| | ||||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17981577 agggagagcttgccg-caatttgggtcccacaatgctcgagagattagtctccgcagttgcgcgcggaggatacccggttta 17981657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 37568890 - 37568785
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  37568890 aacccaagagcacttagatgagatggaacgggtttcttctagcttaaccaaggtcctgggttcgaatccagccttaggcatgcagcagtgttaaaactct 37568791  T
Q  278 taggga 283  Q
    ||||||    
T  37568790 taggga 37568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 353
Target Start/End: Original strand, 993736 - 993906
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| |||||||||||||  ||  ||||||| |||||||||||||||| ||||||||||| || ||||||||||||||||| | |||||||||||||    
T  993736 caagagcgcttagatgagatgacacgtgtctcttatagcttaaccaaggtcctgggttcgaattcaaccttgggcatgcagcagcg-taaaactcttagg 993834  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    |||| | ||||||||||||||||   ||||| ||  | |||||||| || || |||||||| ||||||||||    
T  993835 gagaacttgccgcccatttgggtcctacaatactgaatggattagtttccgccgttgcgcgtggaggatacc 993906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 176 - 349
Target Start/End: Complemental strand, 7020523 - 7020352
Alignment:
Q  176 aaaacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaact 275  Q
    |||| ||||||||  ||||||||||| | || ||||||||||||||||||||||||| ||  ||||||| ||   || ||||||||||| |||||||| |    
T  7020523 aaaatccaagagcgtttagatgagattgcacgggtctcttctagcttaaccaaggtcttgaattcgaattcaat-ttaggcatgcagcaatgttaaaa-t 7020426  T
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggagga 349  Q
    |||||||||| | ||||||||||||||||   |||||||||||| ||||||||||  |||||||||||||||||    
T  7020425 cttagggagaacttgccgcccatttgggtcctacaatgctcgagtgattagtctcgacagttgcgcgcggagga 7020352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 179 - 330
Target Start/End: Complemental strand, 44752356 - 44752205
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||| || |||||||||||||  ||| ||||||||||||||||||||  || | |||||||||| || |||||||||||| ||  ||||||||||||    
T  44752356 acccaagtgcgcttagatgagatgatacaagtctcttctagcttaaccaaactcctaggttcgaatcaagtcttgggcatgcaacaacgttaaaactctt 44752257  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
     |||||||| |||| || |||||||||  ||||| |||||||||||||||||    
T  44752256 tgggagagcttgccaccaatttgggttctacaatactcgagggattagtctc 44752205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 181 - 303
Target Start/End: Original strand, 7157479 - 7157601
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||| ||| |||||||| ||| ||||  |||||||||| |||||||||| || | |||||||||| ||||||||||||||||||  ||||||||||||||    
T  7157479 ccaatagcgcttagatgggatagaacgagtctcttctaacttaaccaagatcctaggttcgaatctagccttgggcatgcagcaacgttaaaactcttag 7157578  T
Q  281 ggagagcctgccgcccatttggg 303  Q
    ||||||||||||||| |||||||    
T  7157579 ggagagcctgccgcctatttggg 7157601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 177 - 265
Target Start/End: Original strand, 28365926 - 28366014
Alignment:
Q  177 aaacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcag 265  Q
    |||||||||||| |||||||||||||||||  |||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  28365926 aaacccaagagcgcttagatgagatggaacgcgtctcttctaacttaaccaaggtcgtgagttcgaatgcagccttgggcatgcagcag 28366014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 355
Target Start/End: Complemental strand, 38373129 - 38372980
Alignment:
Q  204 aacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttggg 303  Q
    |||| ||||||| ||||||||||||   | |||||||||||||| ||||  ||||||||||| | ||||||||||||| ||||| |||||||||  ||||    
T  38373129 aacatgtctcttatagcttaaccaaatccctgggttcgaatccaaccttatgcatgcagcagcggtaaaactcttaggaagagcttgccgccca--tggg 38373032  T
Q  304 tttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccg 355  Q
    |  |||||||||| ||| |||||||| | |||||||||||||||||||||||    
T  38373031 tcccacaatgctcaaggaattagtctatacagttgcgcgcggaggatacccg 38372980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 277 - 360
Target Start/End: Original strand, 25423821 - 25423904
Alignment:
Q  277 ttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  25423821 ttagggagaacctgccgcccatttgggtcccacaatgctcgagggattagtctcagcagttgcgcgtggaggatacccgattta 25423904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 229 - 363
Target Start/End: Complemental strand, 37180108 - 37179979
Alignment:
Q  229 ggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtc 328  Q
    |||| ||||||||||||||| ||||| |||||| ||||||     |||||||||||||  ||||||||||||| ||  |||||| |||||||||||||||    
T  37180108 ggtcttgggttcgaatccagtcttggacatgcaacagtgt-----ctcttagggagagtgtgccgcccatttgagtcccacaatactcgagggattagtc 37180014  T
Q  329 tctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |  ||| |||||||||||||||||||| |||||||    
T  37180013 tacgcacttgcgcgcggaggatacccgatttacac 37179979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 179 - 325
Target Start/End: Original strand, 33756956 - 33757102
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||| |||||||||||||||  || ||||||||||||||||| ||||||  |  |||||||| |||||||| |||| ||  || ||||||||||||    
T  33756956 acccaagaacacttagatgagatgacacgggtctcttctagcttaatcaaggttcttagttcgaattcagccttgagcatacaatagcgttaaaactctt 33757055  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggatta 325  Q
    ||| ||||| || ||| ||||||  |  ||||||||| |||||||||    
T  33757056 aggaagagcttgtcgctcatttgaatcgcacaatgcttgagggatta 33757102  T

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Target: chr2; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 241 - 341
Target Start/End: Original strand, 38743779 - 38743879
Alignment:
Q  241 gaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcg 340  Q
    ||||| || |||||||||||||||  ||||||||| || |||||||| |||||| ||||||| | ||||||||||  ||||||||||||| |||||||||    
T  38743779 gaatctagtcttgggcatgcagcaacgttaaaacttttggggagagcttgccgctcatttggatctcacaatgctttagggattagtctccgcagttgcg 38743878  T
Q  341 c 341  Q
    |    
T  38743879 c 38743879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 341
Target Start/End: Complemental strand, 14122009 - 14121882
Alignment:
Q  214 ttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatg 313  Q
    ||||||| |||||| |||| || ||| |||| ||| ||||  |||||||||  ||||||| |||||| |||| | ||||||||||||| ||  |||||||    
T  14122009 ttctagcctaaccagggtcctgagtttgaattcagtcttgaacatgcagcaacgttaaaattcttagagagaacttgccgcccatttgagtcccacaatg 14121910  T
Q  314 ctcgagggattagtctctgcagttgcgc 341  Q
    |||||||||||||||| || ||||||||    
T  14121909 ctcgagggattagtctatgaagttgcgc 14121882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 37092247 - 37092173
Alignment:
Q  289 tgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||| ||||||||||  |||| ||||||||||||||||||| ||||||| || |||||||||||||||||||||    
T  37092247 tgccgtccatttgggtcccacagtgctcgagggattagtctccgcagttgtgcacggaggatacccggtttacac 37092173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 184 - 301
Target Start/End: Original strand, 17627543 - 17627660
Alignment:
Q  184 agagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttaggga 283  Q
    ||||| |||||| ||||||  ||  ||||||||||  |||||||||||| || ||||||||||||||||||||||||| ||  ||||||| |||||||||    
T  17627543 agagcgcttagacgagatgacacgcgtctcttctaatttaaccaaggtcctgagttcgaatccagccttgggcatgcaacaacgttaaaattcttaggga 17627642  T
Q  284 gagcctgccgcccatttg 301  Q
     ||  ||| |||||||||    
T  17627643 aagtttgctgcccatttg 17627660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 178 - 301
Target Start/End: Original strand, 17672609 - 17672732
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||| ||||| |||||| ||||||  ||  |||||||| |  |||||||||||| || ||||||||||| ||||||||||||| ||  ||||||| |||    
T  17672609 aaccctagagcgcttagacgagatgacacgcgtctcttcaaatttaaccaaggtcctgagttcgaatccaaccttgggcatgcaacaacgttaaaattct 17672708  T
Q  278 tagggagagcctgccgcccatttg 301  Q
    |||||||||  ||| |||||||||    
T  17672709 tagggagagtttgctgcccatttg 17672732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 270 - 352
Target Start/End: Complemental strand, 12233146 - 12233064
Alignment:
Q  270 aaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatac 352  Q
    ||||||||||| |||||  ||||||||||||  ||||||||||||||||||||||||||||  ||||| |||  |||||||||    
T  12233146 aaaactcttagagagagtttgccgcccatttaagtttcacaatgctcgagggattagtctccacagttacgcttggaggatac 12233064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 340
Target Start/End: Complemental strand, 39401219 - 39401070
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||||  ||  |||| || || |||||||||| || ||| ||||||| ||||||||||||||||| |   |||||||| |||||||||||  |    
T  39401219 ttagatgagatgacacgagtcttttttaacttaaccaagatcttggattcgaattcagccttgggcatgcagtatcattaaaacttttagggagagctcg 39401120  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcg 340  Q
     || |||||| |||  ||||||||||| | |||||| ||| |||||||||    
T  39401119 tcgtccatttaggtcccacaatgctcgtgagattagactccgcagttgcg 39401070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 209 - 353
Target Start/End: Original strand, 38463964 - 38464108
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    |||| ||||| ||||||||| ||  | | |||||||||||||||||||||||| ||  |||||||||||| | | ||||   ||| | ||||| ||  ||    
T  38463964 gtcttttctaacttaaccaaagttctagattcgaatccagccttgggcatgcaacaccgttaaaactcttggagggagctaaccgtctatttgagtccca 38464063  T
Q  309 caatgctcgagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    |||| |||||| ||||||||| |||| ||||||| ||||||||||    
T  38464064 caatactcgagtgattagtctttgcaattgcgcgtggaggatacc 38464108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 14551557 - 14551626
Alignment:
Q  283 agagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatac 352  Q
    |||| |||||||| ||||||||   |||||||||||||||||| |||| |||||||||||| ||||||||    
T  14551557 agagtctgccgcctatttgggtcctacaatgctcgagggattaatctccgcagttgcgcgcagaggatac 14551626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 301
Target Start/End: Original strand, 17658471 - 17658563
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttg 301  Q
    ||||||||||  ||||||||| || ||  |||||||| ||||||||||||||| ||  ||||||| ||||||||||||  ||| |||||||||    
T  17658471 gtctcttctaatttaaccaagatcctgaattcgaatctagccttgggcatgcaacaacgttaaaattcttagggagagtttgctgcccatttg 17658563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 178 - 286
Target Start/End: Original strand, 24359543 - 24359650
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||| ||||||||| ||| || || ||||||||| ||||| ||||||| | |||| |||||||||||||   ||||||||   |||||||| |    
T  24359543 aacccaagagcgcttagatgatatgaaatag-tctcttctaacttaatcaaggtcctaggtttgaatccagccttgataatgcagcaacattaaaacttt 24359641  T
Q  278 tagggagag 286  Q
    |||||||||    
T  24359642 tagggagag 24359650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 279
Target Start/End: Complemental strand, 3772703 - 3772605
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctta 279  Q
    |||||||| |||||||||||||  ||| ||||||||||  |||||||||||| |  |||||||||||  ||||  |||||| || ||||||| ||||||    
T  3772703 ccaagagcgcttagatgagatgacacaagtctcttctaatttaaccaaggtcctaagttcgaatccaatcttgaacatgcaacaatgttaaacctctta 3772605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 268 - 353
Target Start/End: Original strand, 14412789 - 14412874
Alignment:
Q  268 ttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    |||||||| ||||||||||| ||  |||||| || ||  || ||||||| ||| ||||||||||||||||| ||||| ||||||||    
T  14412789 ttaaaacttttagggagagcttgttgcccatctgtgtcccataatgctcaaggaattagtctctgcagttgtgcgcgaaggatacc 14412874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 251 - 344
Target Start/End: Original strand, 35476224 - 35476317
Alignment:
Q  251 ttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcg 344  Q
    ||||||||||| || ||||||||||||| |||||||  || || |||||||||| ||||||  ||||| |||| ||| ||| | ||||||||||    
T  35476224 ttgggcatgcaacattgttaaaactcttcgggagagtttgtcgtccatttgggtctcacaaaactcgaaggatcagtttctactgttgcgcgcg 35476317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 340
Target Start/End: Original strand, 17655750 - 17655801
Alignment:
Q  289 tgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcg 340  Q
    |||| ||||||||| || ||||| |||||||||||||||||| |||||||||    
T  17655750 tgccacccatttggattccacaaggctcgagggattagtctccgcagttgcg 17655801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 354
Target Start/End: Complemental strand, 24413071 - 24412914
Alignment:
Q  196 tgagatggaacaggtctcttctagcttaaccaa-ggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgc 294  Q
    |||||||| ||  ||||||||||| |||| ||| |||| || ||||||||| | |||||  |||||||||  ||||||||||| ||| ||||| |||| |    
T  24413071 tgagatggtacgagtctcttctagtttaagcaaaggtcttgagttcgaatctaaccttga-catgcagcaacgttaaaactctaagg-agagcttgccac 24412974  T
Q  295 ccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggataccc 354  Q
    | ||||| ||  |||||| || |||| ||||||||| |||||| |||  |||||||||||    
T  24412973 ctatttgagtcccacaatacttgaggaattagtctccgcagttccgctaggaggataccc 24412914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 269 - 347
Target Start/End: Original strand, 34386552 - 34386630
Alignment:
Q  269 taaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggag 347  Q
    ||||||||| |  |||||| ||||| | |||||| | ||| |||||||||| ||||| ||||||||||| |||||||||    
T  34386552 taaaactctcatagagagcttgccgtctatttggatctcataatgctcgagagattaatctctgcagttacgcgcggag 34386630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 251 - 301
Target Start/End: Original strand, 39314497 - 39314547
Alignment:
Q  251 ttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttg 301  Q
    ||||||||||||| | |||||||||| |||||||||  |||||||||||||    
T  39314497 ttgggcatgcagctgcgttaaaactcgtagggagagtttgccgcccatttg 39314547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 44814951 - 44815001
Alignment:
Q  313 gctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||| ||||||||||||||||||||||| || ||||| |||||||| ||||    
T  44814951 gctcaagggattagtctctgcagttgcgagcagaggacacccggttcacac 44815001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 13835521 - 13835444
Alignment:
Q  277 ttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggataccc 354  Q
    ||||||||||| |||||  |||||| ||  ||||||| | ||||||||||| |||||||||| | | |||||||||||    
T  13835521 ttagggagagcttgccgttcatttgagtcccacaatgtttgagggattagtttctgcagttgtgtgtggaggataccc 13835444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 13987041 - 13986992
Alignment:
Q  237 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    ||||||||||| ||||| |||||||| ||||| |||||| ||||||||||    
T  13987041 gttcgaatccaaccttgagcatgcagtagtgtaaaaacttttagggagag 13986992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 286
Target Start/End: Complemental strand, 13992939 - 13992890
Alignment:
Q  237 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    ||||||||||| ||||| |||||||| ||||| |||||| ||||||||||    
T  13992939 gttcgaatccaaccttgagcatgcagtagtgtaaaaacttttagggagag 13992890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 45413993 - 45413956
Alignment:
Q  326 gtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||| |||||||||||| |||||||||||||||||||    
T  45413993 gtctccgcagttgcgcgccgaggatacccggtttacac 45413956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 354
Target Start/End: Original strand, 1682136 - 1682176
Alignment:
Q  314 ctcgagggattagtctctgcagttgcgcgcggaggataccc 354  Q
    ||||||||||||||||| |||||||||| | ||||||||||    
T  1682136 ctcgagggattagtctccgcagttgcgcacagaggataccc 1682176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 183 - 255
Target Start/End: Complemental strand, 40688888 - 40688817
Alignment:
Q  183 aagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttggg 255  Q
    |||||| ||||| ||||||||||  ||||||||||| ||||||||| ||| || | |||||| ||||||||||    
T  40688888 aagagcgcttaggtgagatggaattggtctcttctaacttaaccaaagtcctgag-tcgaattcagccttggg 40688817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 325
Target Start/End: Complemental strand, 42905755 - 42905643
Alignment:
Q  210 tctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcac 309  Q
    |||||| ||||||||| |||||| | | ||||||||||  ||| | ||||||||||||||||||||||  || ||||  ||||| | |||||||| ||||    
T  42905755 tctcttttagcttaactaaggtcctag-ttcgaatccaaactttgtcatgcagcagtgttaaaactct--ggaagagtttgccgtctatttgggtatcac 42905659  T
Q  310 aatgctcgagggatta 325  Q
     | ||||||| |||||    
T  42905658 gaggctcgagagatta 42905643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 363
Target Start/End: Complemental strand, 44732615 - 44732587
Alignment:
Q  335 gttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||||||||||||    
T  44732615 gttgcgcgcggaggatacccggtttacac 44732587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 201 - 363
Target Start/End: Original strand, 26332 - 26494
Alignment:
Q  201 tggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccattt 300  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26332 tggaacgggtctcttctagcttaaccaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccattt 26431  T
Q  301 gggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||  ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||    
T  26432 gggtcccacaatgttcgagagattagtctccgcagttgcgcgcggaggatacccggtttacac 26494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 5e-66; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 176 - 363
Target Start/End: Complemental strand, 30996130 - 30995943
Alignment:
Q  176 aaaacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaact 275  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||  ||||||||||||| ||| |||||||||    
T  30996130 aaaacccaagagcgcttagatgagatggaacgggtctcttctatcttaaccaaggtcctgggttcgaatccgaccttgggcatgcaacagcgttaaaact 30996031  T
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||||||||||||| |||||||||||||||||||| | |||||||||    
T  30996030 cttagggagagtctgccgcccatctgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatatctggtttacac 30995943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 179 - 363
Target Start/End: Complemental strand, 48204473 - 48204289
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||  |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||    
T  48204473 acccaagagtgcttagatgagatggaacgagtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagcaacgttaaaaccctt 48204374  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||| || || ||||||||||| |||||||||| |||||||||| || |||||||||||||||||||||||| |||||||    
T  48204373 agggagagcttgtcgtccatttgggttccacaatgctcaagggattagtttccgcagttgcgcgcggaggatacccgatttacac 48204289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 27763702 - 27763884
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| |||||||||||| |||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||    
T  27763702 acccaagagcgcttagatgagatagaacgggtctc--ctagcttaaccaaggtcctgggttcgaatccagccttgggcatacaacagtgttaaaactctt 27763799  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||| |||||| ||||||| ||  |||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||    
T  27763800 agggagagtctgccgtccatttgagtcccacaatgctcgagggattagtctccgcagttgcgcgcagaggatatccggtttacac 27763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 25224678 - 25224862
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||| ||  ||||| ||||||||| ||||||||||||    
T  25224678 acccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggtcctgggttcgaatcaagttttgggaatgcagcagcgttaaaactctt 25224777  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    | ||||| | |||||||||||| |||  |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  25224778 aaggagaacttgccgcccatttaggtcccacaatgctcaagggattagtctccgcagttgcacgcggaggatacccggtttacac 25224862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 181 - 362
Target Start/End: Original strand, 38331109 - 38331290
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||| ||||||||||||||| | ||||||||||| ||||||||| ||| || ||| ||||||| | ||| ||||||||||| ||||||||||||||    
T  38331109 ccaagagcgcttagatgagatggatcgggtctcttctaacttaaccaatgtcctgagtttgaatccaactttgagcatgcagcagcgttaaaactcttag 38331208  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
     |||||| ||||||||||||||||  ||||||| | |||||||||||||| |||||||| ||||||||||||||| ||||||    
T  38331209 agagagcttgccgcccatttgggtcccacaatgtttgagggattagtctccgcagttgcacgcggaggatacccgatttaca 38331290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 241 - 360
Target Start/End: Original strand, 20861289 - 20861408
Alignment:
Q  241 gaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcg 340  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| |    
T  20861289 gaatccagcattgggcatgcagcagcgttaaaactcttagggagagcctgccgcccatttgggttccataatgctcgagggattagtctccgcagttgtg 20861388  T
Q  341 cgcggaggatacccggttta 360  Q
    |||||||||||||| |||||    
T  20861389 cgcggaggatacccagttta 20861408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 179 - 337
Target Start/End: Original strand, 14352533 - 14352694
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgg----gcatgcagcagtgttaaaac 274  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |  | |||||||||||||||||||    ||||||||||||||||||||    
T  14352533 acccaagagcgcttagatgagatggaacaagtctcttctagcttaaccaagatattcggttcgaatccagccttggacatgcatgcagcagtgttaaaac 14352632  T
Q  275 tcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt 337  Q
    ||||| ||||||| || || |||||| || | | |||| ||||||||||||||||| ||||||    
T  14352633 tcttacggagagcttgtcgtccattt-ggatacccaatactcgagggattagtctccgcagtt 14352694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 210 - 363
Target Start/End: Original strand, 22288245 - 22288398
Alignment:
Q  210 tctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcac 309  Q
    ||||||||| ||||||||| ||| || |||||||| ||||||||  |||||| || |||||||||||||||||||| | || || ||||||| ||| |||    
T  22288245 tctcttctaacttaaccaaagtcctgagttcgaattcagccttgaacatgcaacaatgttaaaactcttagggagaacttgtcgtccatttgagttacac 22288344  T
Q  310 aatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||    
T  22288345 aatactcaaggaattagtctctgcagttgtgcgcggaggatacccggtttacac 22288398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 237 - 353
Target Start/End: Original strand, 55123134 - 55123250
Alignment:
Q  237 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagt 336  Q
    ||||||||||||||||||  ||||||||| ||||||| ||||||||||||| |||  ||||||||||| ||||||||||||||||||||||||  |||||    
T  55123134 gttcgaatccagccttggaaatgcagcagcgttaaaattcttagggagagcttgctacccatttgggtctcacaatgctcgagggattagtcttcgcagt 55123233  T
Q  337 tgcgcgcggaggatacc 353  Q
    |||||||||||||||||    
T  55123234 tgcgcgcggaggatacc 55123250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 179 - 305
Target Start/End: Original strand, 38088614 - 38088740
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    |||||||||||||| |||||||||||| || ||||||||||||    
T  38088614 acccaagagcgcttagatgagatgaaacgggtctcttctagcttaaccaaggttccaggttcgaatccagctttgggcatgcagtagcgttaaaactctt 38088713  T
Q  279 agggagagcctgccgcccatttgggtt 305  Q
    ||||||| | ||||||| |||||||||    
T  38088714 agggagaacttgccgcctatttgggtt 38088740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 363
Target Start/End: Original strand, 40294603 - 40294775
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    ||||||||||||  ||  ||||| |||| ||||| ||||||| || ||||||||||||||||||  ||||| || |||||||||||||||||| ||| ||    
T  40294603 ttagatgagatgacacgagtctcctctaccttaatcaaggtcctgagttcgaatccagccttggatatgcaacaatgttaaaactcttagggaaagcttg 40294702  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||| ||||||  |  |||||| ||||| ||||||||||| |||||||||| |  |||||||||| |||||||    
T  40294703 ccgctcatttgaatcccacaatactcgaaggattagtctccgcagttgcgcacaaaggatacccgatttacac 40294775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 1642644 - 1642769
Alignment:
Q  238 ttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt 337  Q
    |||||||| |||||||  |||||||| ||||||||||| |||||||||| || ||| ||||||||||  |||||| || ||||||||||| || ||||||    
T  1642644 ttcgaatctagccttgaacatgcagccgtgttaaaacttttagggagagtctaccgtccatttgggtcccacaatacttgagggattagtttccgcagtt 1642743  T
Q  338 gcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||| ||| |||||||    
T  1642744 gcgcgcggaggatatccgatttacac 1642769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 355
Target Start/End: Complemental strand, 48211099 - 48210946
Alignment:
Q  202 ggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttg 301  Q
    ||||| ||||||||||| ||||| ||||||  | |||||||||||||||||| ||||||||||  ||||||||||||| ||||||| ||||| | ||||     
T  48211099 ggaacgggtctcttctaacttaatcaaggtttttggttcgaatccagccttgagcatgcagcaacgttaaaactcttatggagagcttgccgtctattta 48211000  T
Q  302 ggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccg 355  Q
    |||  |||||| ||||||| |||  |||| |||||||| |||||| ||||||||    
T  48210999 ggtcccacaatactcgaggaattgatctccgcagttgcacgcggaagatacccg 48210946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 287 - 363
Target Start/End: Original strand, 8757431 - 8757507
Alignment:
Q  287 cctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  8757431 cctgccgcctatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatacccggtttacac 8757507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 212 - 355
Target Start/End: Complemental strand, 43621444 - 43621297
Alignment:
Q  212 tcttctagcttaaccaaggtcgt--gggttcgaatccagcctt-gggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    |||||||| |||||||||||  |  |||||||||||||  ||| ||| ||||||||  ||||||||| ||||||||||| |||| |||||||  || |||    
T  43621444 tcttctagtttaaccaaggttttttgggttcgaatccaaactttgggtatgcagcaacgttaaaacttttagggagagcttgcctcccatttaagtctca 43621345  T
Q  309 caa-tgctcgagggattagtctctgcagttgcgcgcggaggatacccg 355  Q
    ||| ||||||||||||||||||||| |||||||||| |||||||||||    
T  43621344 caaatgctcgagggattagtctctgtagttgcgcgcagaggatacccg 43621297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 176 - 329
Target Start/End: Original strand, 15283051 - 15283200
Alignment:
Q  176 aaaacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaact 275  Q
    ||||| |||||||  ||||||||||||  ||  |||||||||| |||||| |||||   |||||||||||||| | ||||||||||||| | ||||||||    
T  15283051 aaaacacaagagcgtttagatgagatgatacgagtctcttctaacttaactaaggt---gggttcgaatccagtcatgggcatgcagca-tcttaaaact 15283146  T
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtct 329  Q
    |||| ||| ||  ||||||||||||||||  ||||||||||||| |||||||||    
T  15283147 cttatggaaagattgccgcccatttgggtcccacaatgctcgagagattagtct 15283200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 292
Target Start/End: Original strand, 42514586 - 42514698
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagca--gtgttaaaactctta 279  Q
    ||||||| ||||||||||||| |||  ||||||||||||||||| || ||| |||||||||||||| | ||||||||||| ||  | |||||||||||||    
T  42514586 caagagcgcttagatgagatgaaacgtgtctcttctagcttaactaaagtcttgggttcgaatccaactttgggcatgcatcagcgcgttaaaactctta 42514685  T
Q  280 gggagagcctgcc 292  Q
    |||||||| ||||    
T  42514686 gggagagcttgcc 42514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 363
Target Start/End: Original strand, 22288557 - 22288684
Alignment:
Q  236 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcag 335  Q
    ||||||||| |||| |||  |||||| ||||| |||||||||||| |||| | || ||  |||||| ||| | |||| |||||   ||||||||||||||    
T  22288557 ggttcgaattcagctttgaacatgcaacagtgctaaaactcttagtgagaacttgtcgtacatttgagttactcaatactcgacaaattagtctctgcag 22288656  T
Q  336 ttgcgcgcggaggatacccggtttacac 363  Q
    ||| ||||||||||||||||||||||||    
T  22288657 ttgtgcgcggaggatacccggtttacac 22288684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 223 - 354
Target Start/End: Original strand, 39950235 - 39950366
Alignment:
Q  223 aaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgaggga 322  Q
    |||||||||| |||||| ||||||||  |||| |||||||||| ||||||| | |||||||||  ||| ||  ||||||| |   ||||||||||| |||    
T  39950235 aaccaaggtcttgggttagaatccagttttggacatgcagcagcgttaaaatttttagggagaatctgtcgttcatttggatccgacaatgctcgaagga 39950334  T
Q  323 ttagtctctgcagttgcgcgcggaggataccc 354  Q
    |||||||| ||||||||  |||||||||||||    
T  39950335 ttagtctccgcagttgcatgcggaggataccc 39950366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 236 - 363
Target Start/End: Original strand, 46725461 - 46725587
Alignment:
Q  236 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcag 335  Q
    |||| |||| ||||||||||||| || ||  ||||||||||||||||| ||  ||| | |||| |||||  ||||||||| ||||||||||||||| |||    
T  46725461 ggtttgaatgcagccttgggcattcaacaacgttaaaactcttagggatagtttgctgtccatctgggtc-cacaatgcttgagggattagtctcttcag 46725559  T
Q  336 ttgcgcgcggaggatacccggtttacac 363  Q
    || ||||||||||||||  |||||||||    
T  46725560 ttacgcgcggaggatacttggtttacac 46725587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 236 - 330
Target Start/End: Original strand, 15446028 - 15446126
Alignment:
Q  236 ggttcgaatccagccttgggcat----gcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
    |||||||||||||||||||||||    ||||||||||||| | || || ||||||  ||||| |||||||||| ||||||||||||| |||||||||||    
T  15446028 ggttcgaatccagccttgggcattcgtgcagcagtgttaatattcgtatggagagtttgccgtccatttgggtctcacaatgctcgacggattagtctc 15446126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 308 - 363
Target Start/End: Complemental strand, 40318482 - 40318427
Alignment:
Q  308 acaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||| |||||||    
T  40318482 acaatgttcgagggattagtctccgcagttgcgcgcggaggatacccgttttacac 40318427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 228 - 361
Target Start/End: Original strand, 11767138 - 11767271
Alignment:
Q  228 aggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagt 327  Q
    ||||| |||||||||||| | ||||||||||||| || | |||||||||||||  || || ||||||||||||| ||  ||||||  | || ||||||||    
T  11767138 aggtcctgggttcgaatctatccttgggcatgcaacaatattaaaactcttagcaagtgcttgccgcccatttgagtcccacaatatttgaaggattagt 11767237  T
Q  328 ctctgcagttgcgcgcggaggatacccggtttac 361  Q
    ||  ||| || |||| |||||||||||| |||||    
T  11767238 cttcgcaattacgcgtggaggatacccgatttac 11767271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 281
Target Start/End: Original strand, 22755652 - 22755725
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||| |||||| |||||||| ||  | ||||||||||||||||||||||||||||||  ||||||||||||||    
T  22755652 ggtctattctaggttaaccaaagtactaggttcgaatccagccttgggcatgcagcagcattaaaactcttagg 22755725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 363
Target Start/End: Original strand, 25739155 - 25739251
Alignment:
Q  268 ttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgca-gttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||||||||||  | ||||||||||||||  || ||  |||||   ||||||||| ||| |||||| ||||||||||||||||||||||    
T  25739155 ttaaaactcttagggagagttttccgcccatttgggtcccataagactcgataaattagtctccgcaagttgcgtgcggaggatacccggtttacac 25739251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 28967314 - 28967243
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||||| ||||||||||||| || ||||||||  ||||||| | |||||||| || ||||||||||||    
T  28967314 gtctcttctaacttaaccaaggtcatgtgttcgaattgagccttgtgtatgcagcaatgctaaaactcttag 28967243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 46604720 - 46604657
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaat 244  Q
    |||||||| |||||||||||||||||  ||||||| || ||||||||||||  |||||||||||    
T  46604720 ccaagagcgcttagatgagatggaacgagtctcttataacttaaccaaggttctgggttcgaat 46604657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 179 - 278
Target Start/End: Original strand, 3765225 - 3765326
Alignment:
Q  179 acccaagagcacttagatgagatggaacagg-tctcttctagcttaacca-aggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactc 276  Q
    ||||||||||||||  ||||||||| |  || ||||||| |||||||||| ||||| ||||||||||| || || || | |||||||||||||||| |||    
T  3765225 acccaagagcacttgaatgagatggtaagggatctcttccagcttaaccagaggtcctgggttcgaattcaaccctgagaatgcagcagtgttaaatctc 3765324  T
Q  277 tt 278  Q
    ||    
T  3765325 tt 3765326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 54877841 - 54877913
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    ||||||||||| ||||||||||||  || ||| |||| ||||||||||||| || ||  ||||||||||||||    
T  54877841 ggtctcttctaacttaaccaaggttttgagtttgaattcagccttgggcatccaacaacgttaaaactcttag 54877913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 44941316 - 44941246
Alignment:
Q  289 tgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||||||||| |  ||  |||||||||| ||||||||| |||||||||||||||||||| || |||||    
T  44941316 tgccgcccatttggatcccattatgctcgagg-attagtctccgcagttgcgcgcggaggatatccagttta 44941246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 209 - 303
Target Start/End: Original strand, 9651059 - 9651153
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttggg 303  Q
    ||||||||||  |||| || |||| ||||||||||| ||||||||| |||||| ||  |||||||   ||||||||||| ||| || ||||||||    
T  9651059 gtctcttctaatttaatcatggtcttgggttcgaattcagccttggacatgcaacaacgttaaaatagttagggagagcttgctgctcatttggg 9651153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 250 - 352
Target Start/End: Complemental strand, 23189617 - 23189515
Alignment:
Q  250 cttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggagga 349  Q
    |||| ||||| ||||| ||| ||||| |||||| |||  |||||| |||||| || |||||| | ||||| |||||||||||  ||||| ||||| ||||    
T  23189617 cttgagcatgtagcagagtttaaacttttagggtgagtttgccgctcatttgagtctcacaaggttcgagagattagtctctatagttgtgcgcgaagga 23189518  T
Q  350 tac 352  Q
    |||    
T  23189517 tac 23189515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 22755727 - 22755770
Alignment:
Q  322 attagtctctgcagttgcgcgcg--gaggatacccggtttacac 363  Q
    |||||||||| ||||||||||||  |||||||||||||||||||    
T  22755727 attagtctcttcagttgcgcgcgtggaggatacccggtttacac 22755770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 2e-65; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 174
Target Start/End: Original strand, 46706120 - 46706294
Alignment:
Q  2 gtgggtagataatacttcactgatttatttatttatacatttatttggttgtaataaaatgtggtttgataacattcaactactgccactgttaaagctc 101  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46706120 gtggttagataacacttcactgatttatttatttatacatttatttggttgtaataaaatgtggtttgataacattcaactactgccactgttaaagctc 46706219  T
Q  102 ag--nnnnnnnatagaatagagtaataatatagcccactcaataaatattatttttgtaaaaatattatcattta 174  Q
    ||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  46706220 agtttttttttatagaatagagtaataatatagcccactcaataaatattatttttttaaaaatattatccttta 46706294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 22022099 - 22022283
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  22022099 acccaagagcgtttagatgagatggaacaggtctcttctagcttaactaaggttgtgggttcgaatccagccttgggcatgcagcagcattaaaactctt 22022198  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||| | |||| |||||||||||  ||||||  |||||||||||||||| |||||||| || ||||||||||| || |||||    
T  22022199 agggagaacttgccacccatttgggtcccacaatattcgagggattagtctccgcagttgcacgtggaggatacccagtatacac 22022283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 176 - 363
Target Start/End: Original strand, 16756058 - 16756245
Alignment:
Q  176 aaaacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaact 275  Q
    ||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||  |||||| |||| |||| |||||||||||| || |||||||||    
T  16756058 aaaacccaagagcgcttagatgagatggaacggatctcttctagcttaaccaaggttctgggtttgaattcagcattgggcatgcagaagcgttaaaact 16756157  T
Q  276 cttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||||| || ||  |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||    
T  16756158 cttagggagagcatgtcgtgcatttgggtcccacaatgctcgagggattagtctccgcagttgcgcgcggaggatactcgatttacac 16756245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 238 - 363
Target Start/End: Original strand, 36806649 - 36806774
Alignment:
Q  238 ttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagtt 337  Q
    ||||||| ||||||||||||| ||| || |||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36806649 ttcgaattcagccttgggcatacagtagcgttaaaactcttagggagtgtctgccgcccatttgggttccacaatgctcgagggattagtctctgcagtt 36806748  T
Q  338 gcgcgcggaggatacccggtttacac 363  Q
    || |||||||||||||||||||||||    
T  36806749 gcacgcggaggatacccggtttacac 36806774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 211 - 363
Target Start/End: Complemental strand, 18428271 - 18428120
Alignment:
Q  211 ctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcaca 310  Q
    ||||| |||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||| | ||||||||    ||||    
T  18428271 ctcttgtagcttaaccaaggttctggattcgaatccaaccttgggcatgcagcagtgttaaaacttttagggagagtctgctgtccatttggccc-caca 18428173  T
Q  311 atgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18428172 atgctcgagggattagtctctgcagttgcgcgcggaggatacccgatttacac 18428120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 363
Target Start/End: Original strand, 45806214 - 45806399
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    |||||| |||| |||||||||||| |||| ||||||||||| ||||||||||||| || |||||||| ||| ||||||||||||||||| ||||||||||    
T  45806214 aacccaggagcgcttagatgagatagaacgggtctcttctatcttaaccaaggtcctgagttcgaattcagtcttgggcatgcagcagttttaaaactct 45806313  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||| | ||||| ||||  || |||||||  ||||  ||||||||||||||||| |||| |||||||||  |||||||||    
T  45806314 tagggagagcataccgcctatttaagtctcacaatattcgaatgattagtctctgcagttacgcgtggaggatacatggtttacac 45806399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 179 - 358
Target Start/End: Original strand, 28724652 - 28724830
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||  ||| || ||| ||||||| ||||||||  |||||| ||||||||||||||||    
T  28724652 acccaagagcgcttagatgagatggaacgagtctcttctagcttaataaag-tcctggattcgaattcagccttgaacatgcaacagtgttaaaactctt 28724750  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtt 358  Q
    ||| |||| |||||| ||||||| ||   |||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  28724751 aggaagagtctgccgtccatttgagtcctacaatgttcgagggattagtctccgcaattgcgcgcggaggatacccggtt 28724830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 197 - 363
Target Start/End: Original strand, 12035546 - 12035713
Alignment:
Q  197 gagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaa-ctcttagggagagcctgccgcc 295  Q
    |||||||||  |||||||||||| |||||||| ||| | ||||||||||||||||| |||||||| || |||||||| ||||||||||||| ||||||||    
T  12035546 gagatggaaagggtctcttctagtttaaccaaagtctttggttcgaatccagcctttggcatgcaacattgttaaaaactcttagggagagtctgccgcc 12035645  T
Q  296 catttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||  |||||||||||||||||||||||| ||| |||| || ||| ||||| || |||||||    
T  12035646 catttgggtcccacaatgctcgagggattagtctcagcaattgcacgtggatgatactcgatttacac 12035713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 214 - 363
Target Start/End: Original strand, 46864105 - 46864254
Alignment:
Q  214 ttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatg 313  Q
    ||||||||||| ||| ||  ||||||| |||||||| |||||||||||| || ||||||| ||||||||||| | ||||| |||||||||||||||||||    
T  46864105 ttctagcttaatcaaagttttgggttcaaatccagctttgggcatgcagtagcgttaaaattcttagggagaacttgccgtccatttgggtttcacaatg 46864204  T
Q  314 ctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
     |||||||||||||||||||||||||||||  |||||||| | |||||||    
T  46864205 ttcgagggattagtctctgcagttgcgcgcaaaggatacctgatttacac 46864254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 227 - 359
Target Start/End: Complemental strand, 9781103 - 9780971
Alignment:
Q  227 aaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattag 326  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||  ||||||||||||||||||||    
T  9781103 aaggtcttgagttcgaatccagccttgggcatgcagcagcgttaaaactcttagggagagtcggccgcccatttgggtcccacaatgctcgagggattag 9781004  T
Q  327 tctctgcagttgcgcgcggaggatacccggttt 359  Q
    | || | ||||| |||||||| |||||| ||||    
T  9781003 tatccgtagttgggcgcggagaatacccagttt 9780971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 260 - 362
Target Start/End: Complemental strand, 42297523 - 42297421
Alignment:
Q  260 cagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttt 359  Q
    |||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||    
T  42297523 cagcagcgttaaaactcttagggagagtctgccgtccatttgggtctcacaatgctcgagggattagtctccgcagttgcgcgcggaggatacctagttt 42297424  T
Q  360 aca 362  Q
    |||    
T  42297423 aca 42297421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 181 - 353
Target Start/End: Original strand, 10750579 - 10750750
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||| ||||||||||||| |||| |||| |||||  |||||||||||| |||||||||||| |  ||||||||| || ||| |||||||||||||     
T  10750579 ccaagagcgcttagatgagatgaaacatgtcttttctaatttaaccaaggtcttgggttcgaatctaatcttgggcatacatcagcgttaaaactctta- 10750677  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    || | || |||||||||||||| |  ||||||| ||||||||||||||| | ||||||||||| |||||||||    
T  10750678 ggtgcgcttgccgcccatttggatcgcacaatgttcgagggattagtctttacagttgcgcgcagaggatacc 10750750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 234 - 363
Target Start/End: Complemental strand, 39547471 - 39547342
Alignment:
Q  234 tgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgc 333  Q
    ||||||||||||||| |||| |||||||||||||| ||||||||||||| ||| |||||||| |||| ||| |||||||| |||| |||||| |||| ||    
T  39547471 tgggttcgaatccagtcttgagcatgcagcagtgtcaaaactcttagggggagtctgccgcctatttaggtctcacaatgttcgacggattaatctccgc 39547372  T
Q  334 agttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||| ||||||  |||||||||||    
T  39547371 agttgcgcgcagaggatttccggtttacac 39547342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 10840998 - 10841157
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||| ||||||||||||| ||||||||||||||| |||||||||| |  ||||||| ||| |||||||||||||| | ||  ||||||| ||||||    
T  10840998 ccaagagcgcttagatgagatgaaacaggtctcttctatcttaaccaagattttgggttcaaattcagccttgggcatgtaacaacgttaaaattcttag 10841097  T
Q  281 ggagagcctgccgcccattt-gggtttcacaatgctcgagggattagtctctgcagttgc 339  Q
    ||||| | |||| ||||||| ||||  ||||||||| ||||||||| | || ||||||||    
T  10841098 ggagaacttgcctcccatttagggtcccacaatgcttgagggattaatttccgcagttgc 10841157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 236 - 353
Target Start/End: Complemental strand, 7242912 - 7242795
Alignment:
Q  236 ggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcag 335  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||||||| || || ||||||||  | ||| ||| ||||||||||||||||| ||||    
T  7242912 ggttcgaatccagtcttggacatgcagcaacgttaaaactcttagggagagtctacctcccatttgaatctcataatactcgagggattagtctccgcag 7242813  T
Q  336 ttgcgcgcggaggatacc 353  Q
    ||||||||||| ||||||    
T  7242812 ttgcgcgcggaagatacc 7242795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 271 - 362
Target Start/End: Original strand, 15642526 - 15642617
Alignment:
Q  271 aaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    ||||||||||||||||  ||||||||||||||||  ||||||||||||| ||||| |||| |||||||||||||||||||||||| ||||||    
T  15642526 aaactcttagggagagtttgccgcccatttgggtcccacaatgctcgagagattattctccgcagttgcgcgcggaggatacccgatttaca 15642617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 191 - 362
Target Start/End: Original strand, 32534074 - 32534244
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||| |||  || ||| ||||||||||||||||||||  ||| ||| ||| |||| ||| ||||||| ||  |||||||||||||| |||||| |     
T  32534074 ttagatgatatgacacgggtttcttctagcttaaccaaggttttggattcaaattcagctttgagcatgcaacaacgttaaaactcttagagagagctta 32534173  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    ||||||| || ||| |||||||||||||| | |||||||| ||| |||||||| ||||||||| ||||||||    
T  32534174 ccgccca-ttaggtctcacaatgctcgagaggttagtctccgcaattgcgcgcagaggatacctggtttaca 32534244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 29124736 - 29124825
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||||||| |||  ||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| ||||||||||||||    
T  29124736 ttagatgagatgaaacgagtctcttctagcttaaccagggtcatgagttcgaatccagcattgggcatgcagcagcgttaaaactcttag 29124825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 44913180 - 44913262
Alignment:
Q  271 aaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacc 353  Q
    ||||||||||||||||| |||||||||| |||||  ||||||||||||| ||||||||||||||||| ||||| |||||||||    
T  44913180 aaactcttagggagagcttgccgcccatctgggtcccacaatgctcgagagattagtctctgcagttacgcgcagaggatacc 44913262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 191 - 347
Target Start/End: Complemental strand, 31733841 - 31733685
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||||||   ||| || ||||||| ||||||||| ||  ||||||||||| |||| || |||||||||||| ||||||||||||||||||||  ||    
T  31733841 ttagatgagatcacacatgtttcttctaacttaaccaatgttttgggttcgaattcagcattaggcatgcagcagagttaaaactcttagggagagtttg 31733742  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggag 347  Q
     || |||| ||||| ||||||  || || | |||||||||  |||||||||||||||    
T  31733741 tcgtccatctgggtgtcacaagactggatgaattagtctccacagttgcgcgcggag 31733685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 191 - 286
Target Start/End: Original strand, 36982346 - 36982441
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    ||||||||||||  ||||||||||||||| ||||||||||||  |||||||||| ||||||| | |||||| ||  ||||||||||||||||||||    
T  36982346 ttagatgagatgacacaggtctcttctagtttaaccaaggtctcgggttcgaattcagccttagacatgcaacaacgttaaaactcttagggagag 36982441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 32883699 - 32883625
Alignment:
Q  212 tcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    |||||||||||||||||| |  |||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  32883699 tcttctagcttaaccaagattttgggttcgaatccagcattggacatgcagcagcgttaaaactcttagggagag 32883625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 17600648 - 17600561
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||||  || ||||||||||||||||||||||||| |||||| |||| |||||||| ||||||| ||  ||||||||||||    
T  17600648 ttagatgagatgacacgggtctcttctagcttaaccaaggtcttgggttagaattcagccttgagcatgcaacatcgttaaaactctt 17600561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 191 - 338
Target Start/End: Complemental strand, 25655414 - 25655267
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||||||||||||  | ||||||| ||||| ||||||  |||||||||||  | | ||||||||||||||  |||||||||||||| |||||  ||    
T  25655414 ttagatgagatggaacaaatatcttctaacttaatcaaggttctgggttcgaatttaacattgggcatgcagcaacgttaaaactcttagagagagtttg 25655315  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttg 338  Q
    ||| ||||||   |  |||||||||  || ||||||||||||||||||    
T  25655314 ccgtccatttaaatcacacaatgctaaagagattagtctctgcagttg 25655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 35692467 - 35692585
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| |||||||||||||| |  ||||| |||||| |||||||| ||| || ||||||||||| | ||||||||||| |   |||||||||||||||    
T  35692467 caagagcgcttagatgagatggcatgggtcttttctagtttaaccaatgtcttgagttcgaatccaacattgggcatgcaacgacgttaaaactcttagg 35692566  T
Q  282 gagagcctgccgcccattt 300  Q
    |||||  |||||| |||||    
T  35692567 gagagtttgccgctcattt 35692585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 190 - 286
Target Start/End: Original strand, 24801371 - 24801467
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    |||||||||||||  || | | |||| ||| ||||| || ||| | ||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  24801371 cttagatgagatgacacggatttcttatagattaactaaagtccttggttcgaatccagccttaggcatgcagcactgttaaaactcttagggagag 24801467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 362
Target Start/End: Original strand, 2044472 - 2044559
Alignment:
Q  275 tcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    ||||||||||||  | ||||| ||||||||| |||||||||| || ||||||||||||||||| ||||  ||| ||||||| ||||||    
T  2044472 tcttagggagagattaccgcctatttgggttccacaatgctcaagagattagtctctgcagtttcgcgtagagaatacccgatttaca 2044559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 14500420 - 14500361
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggt 238  Q
    |||||||||  |||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  14500420 acccaagagtgcttagatgcgatggaacgggtctcttctagcttaaccaaggtcctgggt 14500361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 190 - 265
Target Start/End: Original strand, 21774594 - 21774668
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcag 265  Q
    ||||||||||||| | || |||||||||||||||| ||||||  ||||||||||||||| ||||| ||||||||||    
T  21774594 cttagatgagatgca-catgtctcttctagcttaatcaaggttttgggttcgaatccagtcttggacatgcagcag 21774668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 7624870 - 7624955
Alignment:
Q  195 atgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||||||||| |||| |||||||||||||||| |  ||||||| ||||||||||||| |||||| |||| | ||||||| ||||    
T  7624870 atgagatggaacaagtct-ttctagcttaaccaagattatgggttcaaatccagccttggacatgcaacagtctgaaaactcgtagg 7624955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 343
Target Start/End: Original strand, 36086866 - 36087000
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    ||||||| ||| ||||| |||||| || |||||||||||| |||| ||||||| |  |||||||||||||| | | ||  ||||| | |||| ||| |||    
T  36086866 gtctcttttagtttaacaaaggtcctgagttcgaatccagtcttgcgcatgcaaccatgttaaaactcttatgaaaagtttgccgtctatttaggtctca 36086965  T
Q  309 caatgctcgagggattagtctctgcagttgcgcgc 343  Q
    | ||||| |||||||||||||| | || |||||||    
T  36086966 cgatgctggagggattagtctccgtagctgcgcgc 36087000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 10367575 - 10367664
Alignment:
Q  271 aaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||| |||||| || ||||||||||||||   ||||||||||| |||||| |||| ||||||||| ||| || ||||||| ||||    
T  10367575 aaactcttaaggagagtctaccgcccatttgggtccaacaatgctcgaaggattaatctccgcagttgcgtgcgaagaatacccgattta 10367664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 286
Target Start/End: Original strand, 40019250 - 40019327
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagag 286  Q
    |||||||||| ||||| ||||||  ||||||||||| |||||||||  ||||||||  |||||||||||| |||||||    
T  40019250 gtctcttctaacttaatcaaggttttgggttcgaattcagccttggatatgcagcaacgttaaaactcttggggagag 40019327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 283
Target Start/End: Original strand, 52912616 - 52912702
Alignment:
Q  195 atgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttaggga 283  Q
    |||||||||||| |||||||  ||||||||||||| || ||||||||||||||| |||  ||||| ||||  ||||||||||| |||||    
T  52912616 atgagatggaacgggtctctattagcttaaccaagatcttgggttcgaatccagtctt--gcatgtagcaacgttaaaactctcaggga 52912702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 210 - 301
Target Start/End: Original strand, 13546436 - 13546527
Alignment:
Q  210 tctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttg 301  Q
    ||||||||| |||||| || ||||||||||||||||||| |||   |||| | || |||||||||||||| ||||||  | |||||||||||    
T  13546436 tctcttctaacttaactaaagtcgtgggttcgaatccagtcttatacatgtaacaatgttaaaactcttatggagagtttaccgcccatttg 13546527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 191 - 338
Target Start/End: Original strand, 28506280 - 28506425
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||| |||  ||||||||||||||| ||||| |||||  ||| |||||||  | | |||| |||||||||||||| ||||||||| | ||||  ||    
T  28506280 ttagatgaaatgacacaggtctcttctagtttaactaaggttctggattcgaatttaactttggacatgcagcagtgttgaaactctta-gaagagtttg 28506378  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttg 338  Q
    ||||| |||| |||| ||||| | ||||  ||||||||||| ||||||    
T  28506379 ccgcctatttaggttccacaaggttcga-tgattagtctctacagttg 28506425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 49071673 - 49071740
Alignment:
Q  296 catttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||  ||||||||||||| |||||||||| ||||||||| ||||| |||| ||| |||||||    
T  49071673 catttgggtcccacaatgctcgagagattagtctccgcagttgcgtgcggaagatatccgatttacac 49071740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 193 - 331
Target Start/End: Complemental strand, 33059870 - 33059736
Alignment:
Q  193 agatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgcc 292  Q
    ||||||||||| || ||| |||||||| ||||||||| || ||||||| |||| ||  ||| |||    |||  ||||||||||||| ||||||  ||||    
T  33059870 agatgagatggtactggtatcttctagtttaaccaagatcatgggttcaaatctagttttgagca----gcaacgttaaaactcttaaggagagtttgcc 33059775  T
Q  293 gcccatttgggtttcacaatgctcgagggattagtctct 331  Q
    ||||||||||||  ||||| | | |||| ||||||||||    
T  33059774 gcccatttgggtcccacaaggtttgaggaattagtctct 33059736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 36522340 - 36522259
Alignment:
Q  237 gttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcga 318  Q
    |||||||| ||| ||| | |||||||||  ||||||||||||||||||||  ||||| ||||||| ||  ||||||||||||    
T  36522340 gttcgaatacagtcttagacatgcagcaaggttaaaactcttagggagagtttgccgtccatttgagtcccacaatgctcga 36522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 256 - 352
Target Start/End: Complemental strand, 61256 - 61161
Alignment:
Q  256 catgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatac 352  Q
    |||||||||| ||||||||||||   |||||  |||| || ||||||||  || |||| ||||||||||| ||||||||||||| | ||||||||||    
T  61256 catgcagcagcgttaaaactcttgaagagagtttgccacctatttgggtc-cataatgttcgagggattaatctctgcagttgcacacggaggatac 61161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 6643877 - 6643945
Alignment:
Q  295 ccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    ||||||| |||||||||   |||||  |||| ||||||||||||||||||||||||| ||| |||||||    
T  6643877 ccatttgagtttcacaacattcgagaaattaatctctgcagttgcgcgcggaggataaccgatttacac 6643945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 191 - 327
Target Start/End: Original strand, 11530520 - 11530655
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||| |||||||| |||| || || ||||||||| ||||||| |||||||  |   ||| ||||||||||| ||||||||||||  |||||   ||    
T  11530520 ttagatgaaatggaacatgtctgttttaacttaaccaaagtcgtgg-ttcgaatttaatattgagcatgcagcagcgttaaaactcttgaggagaatttg 11530618  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagt 327  Q
      ||||||||||||| |||| ||||| || |||||||    
T  11530619 ttgcccatttgggttccacagtgctctagagattagt 11530655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 280
Target Start/End: Original strand, 10303107 - 10303194
Alignment:
Q  193 agatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    ||||||||||| |||  ||| |||||||||||| || ||| || ||||||||||||| || | |||||| ||  ||||||||||||||    
T  10303107 agatgagatggcacaaatctattctagcttaactaaagtcttgagttcgaatccagctttagacatgcaacaacgttaaaactcttag 10303194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 376 - 415
Target Start/End: Original strand, 46706307 - 46706346
Alignment:
Q  376 ctatttagagaaaataaaagacgcactaatataattcata 415  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  46706307 ctatttagagaaaataaaagatgcactaatatgattcata 46706346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 327
Target Start/End: Complemental strand, 32883622 - 32883561
Alignment:
Q  266 tgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagt 327  Q
    |||||||||||||||||||||  ||||||||||||||    |||||  ||||||||||||||    
T  32883622 tgttaaaactcttagggagagtttgccgcccatttggaccccacaagactcgagggattagt 32883561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 344
Target Start/End: Complemental strand, 6607739 - 6607691
Alignment:
Q  296 catttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcg 344  Q
    ||||| ||| ||||||||||||||||||||||||| |||| ||| ||||    
T  6607739 catttaggtctcacaatgctcgagggattagtctccgcagctgcacgcg 6607691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 28286540 - 28286474
Alignment:
Q  235 gggttcgaatccagccttgggcatgcagca--gtgttaaaactcttagggagagcctgccgcccattt 300  Q
    |||||||||||||||||||  ||||||| |  ||||||||| | |||||||||| |||||||||||||    
T  28286540 gggttcgaatccagccttga-catgcagaaatgtgttaaaatttttagggagagtctgccgcccattt 28286474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 3e-58; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 190 - 360
Target Start/End: Original strand, 12411138 - 12411308
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 289  Q
    ||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||| |||| ||    
T  12411138 cttagatgagatggaacaggtctcttctaacttaaccaaggtcctgagttcgaatccagccttgggcatgcagcagcgttaaaactcttaggaagagtct 12411237  T
Q  290 gccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    |||||||||||  ||  ||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||    
T  12411238 gccgcccatttaagtcccacaatgcttgagggattagtctccacagttgcgcgcgggggatacccggttta 12411308  T

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Target: chr6; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 179 - 363
Target Start/End: Original strand, 21910184 - 21910367
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    ||||||||||  |||||||||||| |||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| ||  ||||||||||||    
T  21910184 acccaagagcgtttagatgagatgaaacaagtctcttctagcttaaccaagatcctgggttcgaatccagccttgggcatgcaacatcgttaaaactctt 21910283  T
Q  279 agggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    || ||||| ||||||| ||||| |||  |||||| ||| ||||||||||||| |||||||| ||||||||||||| |||||||||    
T  21910284 agagagagtctgccgctcatttaggtcccacaatactc-agggattagtctccgcagttgcacgcggaggatacctggtttacac 21910367  T

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Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 178 - 360
Target Start/End: Original strand, 31412101 - 31412282
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||||||||||||||||||||||| |||||||  ||| ||||| |||||| ||| | ||||| |||| |||||| ||||||||||||||||||||    
T  31412101 aacccaagagcacttagatgagatggaacgggtctctcatagtttaactaaggtcatggat-cgaattcagctttgggcgtgcagcagtgttaaaactct 31412199  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    ||||||||| |||||||||||||||||| |||||||||||||  |||||||||  ||||||||| ||||||||| ||| ||||    
T  31412200 tagggagagtctgccgcccatttgggttccacaatgctcgagaaattagtctccacagttgcgcacggaggatatccgattta 31412282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 208 - 360
Target Start/End: Original strand, 28099251 - 28099403
Alignment:
Q  208 ggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttc 307  Q
    ||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||   || || ||||||| ||| |    
T  28099251 ggtctcttctaccttaactaaggtcctgggttcgaatccagccttgggcatgcagcagtgttaaaacttttagggagaatttgtcgtccatttgagttcc 28099350  T
Q  308 acaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttta 360  Q
    | ||||||||||||||||||||| ||||||||| ||||||||||||| |||||    
T  28099351 ataatgctcgagggattagtctccgcagttgcgagcggaggatacccagttta 28099403  T

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Target: chr6; HSP #5
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 12837004 - 12836878
Alignment:
Q  234 tgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgc 333  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||  |||||||||||||||  ||||||||| ||||||||||||||  |    
T  12837004 tgggttcgaatccagccttaggcatgcagcagcgttaaaactcttagggagagctcgccgcccatttgggtcccacaatgcttgagggattagtctcccc 12836905  T
Q  334 agttgcgcgcggaggatacccggttta 360  Q
    |||||||||||||||||||||||||||    
T  12836904 agttgcgcgcggaggatacccggttta 12836878  T

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Target: chr6; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 182 - 327
Target Start/End: Original strand, 423637 - 423782
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||  |||||| |||||||||||||||||||| |||| ||||||||||||||     
T  423637 caagagcgcttagatgagatggaacagatctcttctagtttaaccaaggttttgggtttgaatccagccttgggcatgctgcagcgttaaaactcttaga 423736  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagt 327  Q
    || |  |||||| ||||||| ||  |||||||||||||||||||||    
T  423737 gataaactgccgtccatttgagtcccacaatgctcgagggattagt 423782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 178 - 362
Target Start/End: Original strand, 25084012 - 25084196
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactct 277  Q
    ||||||||| |||||||||||||||  ||| |||||||||||||||| ||| ||| || |||||||| ||| ||||| ||||||||| ||||||||||||    
T  25084012 aacccaagaacacttagatgagatgacacaagtctcttctagcttaatcaaagtcttgagttcgaattcagtcttggacatgcagcaatgttaaaactct 25084111  T
Q  278 tagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttaca 362  Q
    |||||||||| || |  ||||||  ||| ||||||||||||| ||||||||| |||||||  ||||  | |||||||| ||||||    
T  25084112 tagggagagcttgtcatccatttaagttccacaatgctcgagagattagtctatgcagttatgcgcataagatacccgatttaca 25084196  T

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Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 338
Target Start/End: Complemental strand, 21029129 - 21028982
Alignment:
Q  195 atgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcat------gcagcagtgttaaaactcttagggagagcc 288  Q
    ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||      ||||||| |||||||||||||  |||||      
T  21029129 atgagatggcacgggtctcttctagcttaaccaaggtcttgggttcgaatccagccttgggcatgcagatgcagcagcgttaaaactctta--gagagtt 21029032  T
Q  289 tgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttg 338  Q
    ||||||||||||||||  ||||| |||| ||||||||||||| |||||||    
T  21029031 tgccgcccatttgggtgccacaaggctcaagggattagtctccgcagttg 21028982  T

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Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 191 - 359
Target Start/End: Complemental strand, 31107643 - 31107475
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctg 290  Q
    |||||||||||| ||  ||||||||||| |||||| |||||  || ||||||||||||| |||| |||||| ||| |||||||||||| |||||||| |     
T  31107643 ttagatgagatgaaatgggtctcttctaacttaactaaggttctgagttcgaatccagcattggacatgcaacagcgttaaaactctttgggagagctta 31107544  T
Q  291 ccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggttt 359  Q
    ||| |||||||  |  ||||||  ||||| |||||||||||| | |||||||| ||||||||| |||||    
T  31107543 ccgtccatttgattcccacaatattcgagagattagtctctgtaattgcgcgcagaggatacctggttt 31107475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 181 - 363
Target Start/End: Complemental strand, 15614733 - 15614551
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||| |||| ||||||||||||  |||||||||| ||||||||| ||| ||||||||||| ||| ||||| |||| ||||  ||||||||| || |    
T  15614733 ccaagagcgcttatatgagatggaacgagtctcttctaacttaaccaatgtcatgggttcgaattcagtcttggacatgtagcaacgttaaaacttttcg 15614634  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    | ||| | | || || ||||| ||  |||||||||| ||| ||||||||   |||||||| | ||||||||||| ||||||||    
T  15614633 gaagaacttaccacctatttgagtcccacaatgctctaggaattagtcttcacagttgcgtgtggaggatacccagtttacac 15614551  T

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Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 278374 - 278552
Alignment:
Q  182 caagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagg 281  Q
    |||||||  ||||||||||||  ||  ||||||||||||||||| |||||| || ||| ||||||||| ||||||||||| ||   |||||||||||| |    
T  278374 caagagcgtttagatgagatgacacgagtctcttctagcttaactaaggtcttgagtttgaatccagctttgggcatgcaaca-cattaaaactcttatg 278472  T
Q  282 gagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttac 361  Q
    |||||  ||||| |||||| |||  |||||  ||| |||||||||||    ||||||| | ||||||||||||| |||||    
T  278473 gagagtttgccgtccatttaggtcccacaaaactcaagggattagtcgtcacagttgcacacggaggatacccgatttac 278552  T

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Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 277 - 351
Target Start/End: Original strand, 9536844 - 9536918
Alignment:
Q  277 ttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggata 351  Q
    ||||||||||||| ||| |||||| | || |||||||||||||||||||||||| |||||||||| |||||||||    
T  9536844 ttagggagagcctaccgtccatttagattccacaatgctcgagggattagtctccgcagttgcgctcggaggata 9536918  T

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Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 27735469 - 27735557
Alignment:
Q  191 ttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    ||||||||||||| ||||||||||| |||||||||||| ||| || |||||||| || |||||| |||| ||| ||||||||||||||||    
T  27735469 ttagatgagatggcacaggtctcttttagcttaaccaatgtc-tgagttcgaatacaaccttggacatggagcggtgttaaaactcttag 27735557  T

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Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 339
Target Start/End: Original strand, 28933119 - 28933277
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    ||||||||  ||||||||||| |||   ||||||| || |||||| || ||| ||  || |||| ||||||| | |||||| ||  ||||||| ||||||    
T  28933119 ccaagagcgtttagatgagatagaatgagtctcttttatcttaactaaagtcctgattttgaattcagccttagacatgcaacatcgttaaaattcttag 28933218  T
Q  281 ggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgc 339  Q
     |||||  ||||||||||||||||| ||||||||||||| || |||| || ||||||||    
T  28933219 agagagtttgccgcccatttgggttccacaatgctcgagtgaatagtatccgcagttgc 28933277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 268 - 342
Target Start/End: Original strand, 1534320 - 1534394
Alignment:
Q  268 ttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcg 342  Q
    |||||||||||||||||||| || |||||||||| ||  |||||||||||||| |||  |||| |||||||||||    
T  1534320 ttaaaactcttagggagagcttgtcgcccatttgagtcgcacaatgctcgaggaattgatctccgcagttgcgcg 1534394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 209 - 339
Target Start/End: Original strand, 3237929 - 3238058
Alignment:
Q  209 gtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttca 308  Q
    ||||||||||  ||||||||| || | ||||||||||||||||||  ||| ||| | ||||||||||||||||| || | |||||  |||||  ||| ||    
T  3237929 gtctcttctaatttaaccaagatccttggttcgaatccagccttgaacattcagtaatgttaaaactcttaggg-gaacttgccgttcatttaagttcca 3238027  T
Q  309 caatgctcgagggattagtctctgcagttgc 339  Q
    ||||  ||||||||||||||||  |||||||    
T  3238028 caataatcgagggattagtctccacagttgc 3238058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 21028924 - 21028845
Alignment:
Q  257 atgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttg 338  Q
    ||||||||| ||||||||||||||  ||||  ||||||||||||||||  ||||| |||| ||||||||||||| |||||||    
T  21028924 atgcagcagcgttaaaactcttag--agagtttgccgcccatttgggtgccacaaggctcaagggattagtctccgcagttg 21028845  T

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Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 5944821 - 5944942
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||||  |||| || |||||  || |||||||| || ||||||||||||| || |||||||| ||| ||| | |||| | || |||||||||| ||    
T  5944821 acccaagagtgcttatataagatgatacgggtctcttttaacttaaccaaggtcctgagttcgaattcagtctttgacatgtaacattgttaaaactttt 5944920  T
Q  279 agggagagcctgccgcccattt 300  Q
    ||||||||  ||||||||||||    
T  5944921 agggagagtttgccgcccattt 5944942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 363
Target Start/End: Original strand, 17177180 - 17177301
Alignment:
Q  242 aatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgc 341  Q
    |||| ||| |||||||||||||||  |||||||||||| ||| ||  | | | | |||||| | ||||||| |||||||||||| |||| | | ||| ||    
T  17177180 aatcaagcattgggcatgcagcagctttaaaactcttaaggaaagttttctgtctatttggatctcacaatactcgagggattaatctccgtaattgtgc 17177279  T
Q  342 gcggaggatacccggtttacac 363  Q
    ||||||||||| ||| ||||||    
T  17177280 gcggaggatactcggcttacac 17177301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 300
Target Start/End: Complemental strand, 26477859 - 26477740
Alignment:
Q  181 ccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttag 280  Q
    |||||||| |||| ||||||||  || | ||| || ||||||||||||| || ||  || ||||||||||| ||  ||||||||  ||||||| ||||||    
T  26477859 ccaagagcgcttaaatgagatgacacggatctattttagcttaaccaagatcttgaatttgaatccagcctcggaaatgcagcaacgttaaaattcttag 26477760  T
Q  281 ggagagcctgccgcccattt 300  Q
    ||||||  |||| |||||||    
T  26477759 ggagagtttgccacccattt 26477740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 190 - 352
Target Start/End: Complemental strand, 17457217 - 17457055
Alignment:
Q  190 cttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcct 289  Q
    |||||||||||||  |||| |||||| || ||||||||| ||  || ||| |||| ||| ||| |||||||| ||  ||||||||| ||||| ||||| |    
T  17457217 cttagatgagatgacacagatctcttttaacttaaccaaagttatgagtttgaattcagtcttcggcatgcatcaacgttaaaacttttaggaagagctt 17457118  T
Q  290 gccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatac 352  Q
    | |||| ||||  |   |||||||||  | ||||||||||||||| || ||| | ||||||||    
T  17457117 gtcgcctatttaagacccacaatgcttaaaggattagtctctgcaattacgcaccgaggatac 17457055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 179 - 283
Target Start/End: Original strand, 35224550 - 35224651
Alignment:
Q  179 acccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactctt 278  Q
    |||||||| | |||| |||||||||||| ||||||||    ||||||||||||  | | |||||||| || ||||||| |||||||  |||||||||||     
T  35224550 acccaagaacgcttaaatgagatggaacgggtctcttt---cttaaccaaggttctagattcgaatctagtcttgggcgtgcagcaacgttaaaactctc 35224646  T
Q  279 aggga 283  Q
    |||||    
T  35224647 aggga 35224651  T

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Target: scaffold0009 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 270 - 354
Target Start/End: Complemental strand, 27296 - 27212
Alignment:
Q  270 aaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggataccc 354  Q
    |||||||||||||||||| |||||||||||||| | |||| |||||||||||||||||||  |||||||||||||||||||||||    
T  27296 aaaactcttagggagagcttgccgcccatttggatctcacgatgctcgagggattagtcttcgcagttgcgcgcggaggataccc 27212  T

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Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 184 - 275
Target Start/End: Complemental strand, 32421 - 32330
Alignment:
Q  184 agagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaact 275  Q
    |||||| |||||| ||||||||| ||||||||||||||| ||||||||  ||||||||||||||  |||||| ||||||||| |||||||||    
T  32421 agagcatttagataagatggaacgggtctcttctagcttcaccaaggttctgggttcgaatccaatcttgggtatgcagcagcgttaaaact 32330  T

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Target: scaffold0020 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 167833 - 167918
Alignment:
Q  178 aacccaagagcacttagatgagatggaacaggtctcttctagcttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcag 265  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||    
T  167833 aacccaagagcgcttagatgagatgaaacgggtctcttctagcttaatcaaggtc--gggttcaaatccagccttgggcatgcagcag 167918  T

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Target: scaffold0071 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 16164 - 16066
Alignment:
Q  236 ggttcgaatccagccttgggcat----gcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaatgctcgagggattagtctc 330  Q
    |||||||||||||||||||||||    ||||||||||||| | || || ||||||  ||||| |||||||||| ||||||||||||| |||||||||||    
T  16164 ggttcgaatccagccttgggcattcgtgcagcagtgttaatattcgtatggagagtttgccgtccatttgggtctcacaatgctcgacggattagtctc 16066  T

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Target: scaffold0013 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 363
Target Start/End: Complemental strand, 29197 - 29130
Alignment:
Q  296 catttgggtttcacaatgctcgagggattagtctctgcagttgcgcgcggaggatacccggtttacac 363  Q
    |||||||||  ||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||    
T  29197 catttgggtcccacaatgctcgtgggattagtctccacagttgcgcgcggaggatacccgatttacac 29130  T

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Target: scaffold0189 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 10973 - 11063
Alignment:
Q  221 ttaaccaaggtcgtgggttcgaatccagccttgggcatgcagcagtgttaaaactcttagggagagcctgccgcccatttgggtttcacaa 311  Q
    ||||| |||||| | ||||||||||||   ||||||||||| || |||||||||||||| ||||||  |||||||||||| ||||||||||    
T  10973 ttaactaaggtcctaggttcgaatccatttttgggcatgcaacaatgttaaaactcttacggagagtttgccgcccatttaggtttcacaa 11063  T

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