View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19707_low_21 (Length: 364)

Name: NF19707_low_21
Description: NF19707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19707_low_21
NF19707_low_21
[»] chr4 (53 HSPs)
chr4 (180-356)||(40160090-40160269)
chr4 (198-356)||(35193322-35193483)
chr4 (182-356)||(17503972-17504149)
chr4 (184-328)||(40160489-40160636)
chr4 (182-356)||(17504329-17504507)
chr4 (187-274)||(23986523-23986610)
chr4 (182-311)||(229574-229707)
chr4 (187-356)||(54440574-54440745)
chr4 (176-274)||(51309961-51310059)
chr4 (187-320)||(18965143-18965280)
chr4 (187-328)||(24336161-24336306)
chr4 (187-311)||(24335764-24335892)
chr4 (183-311)||(229160-229292)
chr4 (187-311)||(10795733-10795854)
chr4 (183-311)||(28166003-28166135)
chr4 (187-355)||(56077695-56077867)
chr4 (185-356)||(14439829-14440004)
chr4 (187-274)||(34789839-34789926)
chr4 (187-270)||(34807119-34807202)
chr4 (187-311)||(35193718-35193845)
chr4 (182-280)||(21034687-21034785)
chr4 (187-295)||(34789385-34789496)
chr4 (187-295)||(54441001-54441112)
chr4 (182-274)||(6616670-6616762)
chr4 (187-274)||(21034238-21034325)
chr4 (187-274)||(26974701-26974788)
chr4 (187-274)||(28465537-28465624)
chr4 (183-274)||(33777631-33777722)
chr4 (184-259)||(41608374-41608449)
chr4 (187-274)||(46737111-46737198)
chr4 (187-311)||(12593438-12593566)
chr4 (180-274)||(26974279-26974373)
chr4 (197-270)||(51309680-51309753)
chr4 (184-280)||(6617112-6617208)
chr4 (182-274)||(12593022-12593114)
chr4 (187-292)||(33689832-33689939)
chr4 (182-274)||(41114155-41114247)
chr4 (187-274)||(24851319-24851406)
chr4 (181-235)||(16690933-16690987)
chr4 (181-259)||(36168326-36168404)
chr4 (180-274)||(45839006-45839099)
chr4 (190-282)||(30597967-30598059)
chr4 (210-274)||(46736681-46736745)
chr4 (182-274)||(55677414-55677506)
chr4 (187-356)||(14440198-14440371)
chr4 (187-295)||(19528872-19528984)
chr4 (187-274)||(24851922-24852009)
chr4 (195-258)||(37336620-37336683)
chr4 (317-356)||(51020934-51020973)
chr4 (179-258)||(51640955-51641034)
chr4 (187-272)||(1397598-1397683)
chr4 (185-274)||(16214951-16215040)
chr4 (191-295)||(45838554-45838661)
[»] chr2 (47 HSPs)
chr2 (187-356)||(28143400-28143572)
chr2 (180-338)||(31797166-31797327)
chr2 (187-311)||(43160012-43160141)
chr2 (187-311)||(14942259-14942389)
chr2 (181-273)||(42192700-42192792)
chr2 (181-292)||(44220080-44220194)
chr2 (187-340)||(33920615-33920772)
chr2 (187-295)||(42192243-42192354)
chr2 (180-295)||(38008383-38008501)
chr2 (183-274)||(63420-63511)
chr2 (185-356)||(9330164-9330340)
chr2 (183-295)||(15550672-15550788)
chr2 (183-274)||(20495192-20495283)
chr2 (187-311)||(4355758-4355886)
chr2 (187-356)||(33920981-33921155)
chr2 (182-274)||(5560049-5560141)
chr2 (179-259)||(6949446-6949526)
chr2 (187-274)||(4356212-4356299)
chr2 (183-274)||(13315492-13315583)
chr2 (187-274)||(38007953-38008040)
chr2 (180-295)||(20127732-20127851)
chr2 (181-295)||(11539634-11539752)
chr2 (187-295)||(16953366-16953477)
chr2 (182-356)||(32418157-32418333)
chr2 (187-356)||(4808882-4809055)
chr2 (187-274)||(11540094-11540181)
chr2 (187-274)||(24140130-24140217)
chr2 (187-356)||(43216079-43216252)
chr2 (182-260)||(3824178-3824256)
chr2 (224-274)||(5035903-5035953)
chr2 (187-295)||(62960-63071)
chr2 (197-270)||(2190536-2190609)
chr2 (187-280)||(6949894-6949987)
chr2 (187-295)||(44219647-44219758)
chr2 (182-274)||(649525-649617)
chr2 (187-259)||(649808-649880)
chr2 (183-259)||(15551146-15551222)
chr2 (182-274)||(16952933-16953025)
chr2 (182-274)||(17060904-17060996)
chr2 (186-273)||(5037155-5037241)
chr2 (187-270)||(25336060-25336143)
chr2 (317-356)||(43058470-43058509)
chr2 (188-274)||(16175806-16175892)
chr2 (180-274)||(43160467-43160561)
chr2 (209-274)||(13399876-13399940)
chr2 (180-295)||(4809311-4809429)
chr2 (183-234)||(9329829-9329881)
[»] chr5 (39 HSPs)
chr5 (20-141)||(13824832-13824957)
chr5 (187-340)||(10721789-10721945)
chr5 (179-342)||(41834443-41834610)
chr5 (183-308)||(20266333-20266462)
chr5 (196-354)||(32305830-32305991)
chr5 (187-356)||(27307428-27307603)
chr5 (187-292)||(15115530-15115635)
chr5 (187-356)||(16752585-16752757)
chr5 (187-311)||(22651348-22651476)
chr5 (210-356)||(28495211-28495351)
chr5 (186-259)||(14340400-14340473)
chr5 (186-274)||(4966818-4966906)
chr5 (187-340)||(28494847-28495003)
chr5 (186-340)||(14340793-14340954)
chr5 (181-340)||(27307058-27307220)
chr5 (202-328)||(13557010-13557139)
chr5 (187-260)||(16753040-16753113)
chr5 (187-295)||(18149736-18149847)
chr5 (182-270)||(28289682-28289770)
chr5 (188-295)||(38900648-38900758)
chr5 (187-274)||(4967227-4967314)
chr5 (187-274)||(15029765-15029852)
chr5 (187-274)||(22651767-22651854)
chr5 (187-295)||(28290076-28290187)
chr5 (179-270)||(5162029-5162120)
chr5 (187-295)||(8419053-8419163)
chr5 (187-274)||(17260676-17260763)
chr5 (184-266)||(25973838-25973920)
chr5 (198-274)||(39083372-39083448)
chr5 (317-356)||(2865124-2865163)
chr5 (187-274)||(19291359-19291446)
chr5 (187-274)||(21371152-21371239)
chr5 (187-274)||(28595183-28595270)
chr5 (187-274)||(32697682-32697769)
chr5 (187-264)||(9125865-9125942)
chr5 (182-259)||(21370684-21370761)
chr5 (221-274)||(21769579-21769632)
chr5 (320-356)||(164560-164596)
chr5 (187-274)||(12220659-12220746)
[»] chr3 (66 HSPs)
chr3 (183-356)||(27199701-27199878)
chr3 (187-357)||(49407799-49407972)
chr3 (187-356)||(55192121-55192293)
chr3 (187-356)||(37075689-37075864)
chr3 (187-356)||(36701466-36701639)
chr3 (205-356)||(37847190-37847344)
chr3 (187-356)||(27200062-27200234)
chr3 (182-274)||(36701104-36701196)
chr3 (187-356)||(50900898-50901070)
chr3 (186-340)||(8873693-8873850)
chr3 (187-346)||(49408163-49408324)
chr3 (187-274)||(33412610-33412697)
chr3 (183-274)||(40838651-40838742)
chr3 (182-311)||(44676887-44677020)
chr3 (187-259)||(37076145-37076217)
chr3 (182-274)||(51473312-51473404)
chr3 (179-274)||(49951541-49951636)
chr3 (180-270)||(46013418-46013508)
chr3 (210-340)||(50900558-50900692)
chr3 (187-272)||(40275096-40275181)
chr3 (182-274)||(16701248-16701340)
chr3 (184-295)||(40839084-40839198)
chr3 (187-274)||(43222393-43222480)
chr3 (187-274)||(52236819-52236906)
chr3 (180-274)||(330292-330386)
chr3 (184-349)||(8874063-8874232)
chr3 (187-295)||(49720374-49720485)
chr3 (187-295)||(52237249-52237360)
chr3 (187-299)||(55390025-55390140)
chr3 (180-308)||(12140933-12141065)
chr3 (181-311)||(14654606-14654738)
chr3 (186-295)||(22370598-22370711)
chr3 (182-274)||(49720817-49720909)
chr3 (182-274)||(51827955-51828047)
chr3 (187-274)||(43678298-43678385)
chr3 (187-356)||(50662782-50662955)
chr3 (187-274)||(51828414-51828501)
chr3 (187-274)||(52375787-52375874)
chr3 (276-350)||(33412383-33412457)
chr3 (183-295)||(16689357-16689472)
chr3 (181-322)||(41998633-41998777)
chr3 (187-272)||(43222848-43222933)
chr3 (179-259)||(2044266-2044346)
chr3 (187-259)||(2051298-2051370)
chr3 (187-259)||(14654202-14654274)
chr3 (187-259)||(30513725-30513797)
chr3 (187-259)||(47431699-47431771)
chr3 (187-259)||(49952017-49952089)
chr3 (188-295)||(55389609-55389719)
chr3 (183-311)||(2323378-2323509)
chr3 (187-274)||(12141147-12141234)
chr3 (180-259)||(25534886-25534965)
chr3 (187-274)||(38535312-38535399)
chr3 (187-274)||(41998232-41998319)
chr3 (187-274)||(44676475-44676562)
chr3 (187-274)||(52375330-52375417)
chr3 (182-272)||(39010073-39010163)
chr3 (181-356)||(34105018-34105199)
chr3 (188-295)||(329850-329960)
chr3 (179-235)||(26274562-26274618)
chr3 (183-274)||(32730388-32730479)
chr3 (187-274)||(40275550-40275636)
chr3 (187-274)||(43678740-43678827)
chr3 (179-295)||(51828534-51828654)
chr3 (210-295)||(51828972-51829060)
chr3 (184-264)||(25612442-25612522)
[»] scaffold0007 (6 HSPs)
scaffold0007 (187-356)||(205738-205910)
scaffold0007 (182-274)||(210793-210885)
scaffold0007 (183-274)||(205357-205448)
scaffold0007 (183-274)||(204927-205018)
scaffold0007 (276-345)||(205046-205115)
scaffold0007 (276-345)||(205475-205544)
[»] scaffold0108 (2 HSPs)
scaffold0108 (187-311)||(15514-15641)
scaffold0108 (181-356)||(15110-15288)
[»] chr1 (52 HSPs)
chr1 (187-350)||(17088516-17088682)
chr1 (183-356)||(39485064-39485240)
chr1 (183-328)||(45048534-45048682)
chr1 (197-356)||(9833522-9833685)
chr1 (180-274)||(17641825-17641919)
chr1 (187-311)||(50926656-50926784)
chr1 (187-274)||(1837508-1837595)
chr1 (188-273)||(25274760-25274845)
chr1 (182-356)||(17088144-17088326)
chr1 (187-274)||(23526986-23527073)
chr1 (187-274)||(30787254-30787341)
chr1 (187-311)||(44802586-44802714)
chr1 (186-356)||(45048157-45048330)
chr1 (187-274)||(50304442-50304529)
chr1 (187-295)||(16298685-16298796)
chr1 (187-295)||(10278982-10279090)
chr1 (181-309)||(29438927-29439060)
chr1 (187-274)||(2867914-2868001)
chr1 (183-274)||(8230097-8230188)
chr1 (181-295)||(21938560-21938677)
chr1 (183-258)||(50419389-50419464)
chr1 (187-311)||(50926233-50926363)
chr1 (187-311)||(29021279-29021408)
chr1 (187-259)||(44582530-44582602)
chr1 (187-274)||(2868164-2868251)
chr1 (187-274)||(39485495-39485581)
chr1 (180-311)||(44291726-44291861)
chr1 (187-232)||(8229640-8229685)
chr1 (187-259)||(23340186-23340258)
chr1 (181-295)||(30786768-30786886)
chr1 (182-295)||(37505065-37505182)
chr1 (187-295)||(10278551-10278663)
chr1 (187-274)||(34555838-34555925)
chr1 (183-274)||(37421159-37421250)
chr1 (187-274)||(44291304-44291391)
chr1 (187-295)||(443983-444094)
chr1 (189-274)||(4080026-4080111)
chr1 (209-274)||(29439378-29439443)
chr1 (187-295)||(44954658-44954769)
chr1 (189-274)||(48174178-48174263)
chr1 (187-259)||(9992626-9992698)
chr1 (191-259)||(23526665-23526733)
chr1 (182-274)||(36228791-36228883)
chr1 (187-311)||(37505483-37505610)
chr1 (187-259)||(44954229-44954301)
chr1 (190-257)||(39843497-39843564)
chr1 (187-295)||(9992157-9992269)
chr1 (184-274)||(50305241-50305331)
chr1 (185-234)||(6224698-6224747)
chr1 (210-259)||(29020906-29020955)
chr1 (216-291)||(17641397-17641475)
chr1 (187-267)||(50419723-50419803)
[»] chr6 (22 HSPs)
chr6 (187-356)||(32836367-32836539)
chr6 (180-355)||(35163557-35163737)
chr6 (183-309)||(35163183-35163312)
chr6 (182-295)||(5114466-5114582)
chr6 (183-311)||(32836006-32836132)
chr6 (183-274)||(31242805-31242896)
chr6 (187-308)||(835397-835521)
chr6 (187-308)||(33095717-33095842)
chr6 (183-274)||(25468848-25468939)
chr6 (187-356)||(31073512-31073685)
chr6 (187-274)||(25472469-25472556)
chr6 (180-274)||(31574181-31574275)
chr6 (186-274)||(24640641-24640729)
chr6 (187-260)||(33096081-33096154)
chr6 (187-292)||(30251126-30251235)
chr6 (187-295)||(5120901-5121012)
chr6 (187-260)||(22534068-22534140)
chr6 (187-259)||(835696-835768)
chr6 (187-235)||(22534219-22534267)
chr6 (182-258)||(24822851-24822927)
chr6 (187-292)||(28636295-28636402)
chr6 (187-235)||(30250724-30250772)
[»] chr7 (48 HSPs)
chr7 (187-356)||(35579256-35579428)
chr7 (187-311)||(9393739-9393866)
chr7 (187-311)||(39136689-39136816)
chr7 (182-340)||(34595158-34595320)
chr7 (187-356)||(35578902-35579074)
chr7 (187-274)||(5333883-5333970)
chr7 (187-349)||(9394108-9394272)
chr7 (187-311)||(7732491-7732619)
chr7 (193-349)||(32427397-32427555)
chr7 (181-295)||(786779-786897)
chr7 (187-295)||(15712368-15712479)
chr7 (182-304)||(45815342-45815466)
chr7 (183-274)||(787242-787333)
chr7 (187-309)||(4477705-4477830)
chr7 (187-356)||(9181535-9181708)
chr7 (181-311)||(49064031-49064164)
chr7 (186-295)||(25637630-25637742)
chr7 (182-295)||(39136965-39137081)
chr7 (186-259)||(5745641-5745714)
chr7 (182-274)||(2758154-2758246)
chr7 (182-274)||(9181868-9181960)
chr7 (187-259)||(16917716-16917788)
chr7 (187-308)||(33880623-33880748)
chr7 (187-274)||(5334275-5334362)
chr7 (187-274)||(24929764-24929851)
chr7 (187-274)||(26047960-26048047)
chr7 (180-274)||(7732943-7733037)
chr7 (185-274)||(28687955-28688043)
chr7 (187-292)||(26048382-26048489)
chr7 (187-356)||(27245206-27245380)
chr7 (187-259)||(49064191-49064263)
chr7 (187-295)||(25637200-25637312)
chr7 (187-270)||(48247590-48247673)
chr7 (187-274)||(48248048-48248135)
chr7 (209-259)||(27245675-27245725)
chr7 (181-274)||(11971331-11971424)
chr7 (179-295)||(16081294-16081413)
chr7 (185-274)||(26026318-26026407)
chr7 (187-311)||(34594586-34594713)
chr7 (184-237)||(40669701-40669754)
chr7 (183-235)||(5184427-5184479)
chr7 (182-274)||(5746097-5746188)
chr7 (190-274)||(35161258-35161342)
chr7 (187-311)||(39388682-39388811)
chr7 (182-295)||(16081731-16081847)
chr7 (185-356)||(11973772-11973947)
chr7 (187-280)||(28687596-28687689)
chr7 (184-237)||(35160653-35160706)
[»] chr8 (30 HSPs)
chr8 (181-354)||(28876900-28877077)
chr8 (181-356)||(28877260-28877438)
chr8 (179-270)||(7910611-7910702)
chr8 (185-274)||(18050047-18050136)
chr8 (187-356)||(28254428-28254602)
chr8 (180-274)||(18428218-18428312)
chr8 (187-274)||(7911072-7911159)
chr8 (185-355)||(18805165-18805337)
chr8 (187-356)||(28254796-28254969)
chr8 (182-259)||(599530-599607)
chr8 (187-295)||(15255856-15255967)
chr8 (187-274)||(2208717-2208804)
chr8 (187-311)||(41260676-41260804)
chr8 (177-274)||(599954-600051)
chr8 (187-259)||(16578567-16578639)
chr8 (182-274)||(41260269-41260361)
chr8 (187-340)||(5730820-5730977)
chr8 (187-274)||(15256287-15256374)
chr8 (187-270)||(16578111-16578194)
chr8 (187-234)||(35427308-35427355)
chr8 (187-274)||(42035775-42035862)
chr8 (187-340)||(6115496-6115654)
chr8 (211-295)||(10047068-10047155)
chr8 (189-295)||(18049595-18049705)
chr8 (187-295)||(34799515-34799626)
chr8 (187-274)||(42036228-42036315)
chr8 (187-259)||(9796729-9796801)
chr8 (183-235)||(10918125-10918177)
chr8 (183-235)||(35426841-35426893)
chr8 (184-280)||(35694328-35694424)
[»] scaffold1432 (1 HSPs)
scaffold1432 (187-274)||(521-608)
[»] scaffold0097 (2 HSPs)
scaffold0097 (187-259)||(46739-46811)
scaffold0097 (180-274)||(46262-46356)
[»] scaffold0021 (2 HSPs)
scaffold0021 (197-297)||(159032-159137)
scaffold0021 (221-259)||(159352-159390)
[»] scaffold0712 (1 HSPs)
scaffold0712 (187-339)||(6395-6551)
[»] scaffold0709 (1 HSPs)
scaffold0709 (187-339)||(6413-6569)
[»] scaffold0057 (1 HSPs)
scaffold0057 (185-235)||(61952-62002)


Alignment Details
Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 180 - 356
Target Start/End: Original strand, 40160090 - 40160269
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gt 276  Q
    |||||| ||||||||||||||||||| |||||||| | || ||||||||||| |||||| || ||| |||||||||||||| |||||||||||||    |    
T  40160090 aaaaggcttaattacatttttgatccccgcattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatgtt 40160189  T
Q  277 ttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||| ||||||||||||||||| ||||||||||| ||  ||| | |||||| |||| ||||||||||||||||||||||    
T  40160190 ttttgcagttttagtcctacctcctattttcaactctataaacatggagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 356
Target Start/End: Original strand, 35193322 - 35193483
Alignment:
Q  198 tttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt---ttttgtagttttagtcct 294  Q
    |||| ||||||||||||||||| ||||||||||||||| |  || |||||||||||||||||  ||||||||||||| |   ||||| ||||||||||||    
T  35193322 tttggtcctcgcattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcct 35193421  T
Q  295 acctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    | ||| |||||||||||| || |||| ||||||| |||| ||||||||||||||||||||||    
T  35193422 atctcctattttcaacttcagaaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 17503972 - 17504149
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg----tt 277  Q
    |||| ||||||| | | ||| |||||||||||||| || ||||||||||||||| || || |||||||| ||||| ||| |||| ||||||||     ||    
T  17503972 aaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcc-taaactatcatgttt 17504070  T
Q  278 tttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||| ||||||||||||||||| |||||||||||  || |||||||||||| |||| ||||||||||||||||||||||    
T  17504071 tttgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 184 - 328
Target Start/End: Complemental strand, 40160636 - 40160489
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttt 279  Q
    |||||||||||||||||| |||| ||||||||| |||||||||||||| |||||| || |||||||| ||||||||| || ||||||||||     ||||    
T  40160636 ggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgt-cctaaactatcatgttttt 40160538  T
Q  280 tgtagttttagtcctacctcttattttcaactttagtaacgtagagaaa 328  Q
    || |||||||||| |||||| |||||||||||  || ||||||||||||    
T  40160537 tgcagttttagtcttacctcctattttcaactccagaaacgtagagaaa 40160489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 356
Target Start/End: Complemental strand, 17504507 - 17504329
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttt 278  Q
    ||||||||| |||  ||| ||| ||| |||||||| || ||||||||||||||| | ||| ||| |||||||||||||| |||| ||||||||    |||    
T  17504507 aaggtttaactacgatttcgatactctcattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatgtttt 17504408  T
Q  279 ttgtagttttagtcctacctctta-ttttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||| | ||||||| ||||||| || ||||||||| ||| |||| ||||||| |||| ||||||||||||||||||||||    
T  17504407 ttgcaattttagtactacctcctatttttcaactctagaaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 23986523 - 23986610
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| || ||||| ||||| |||||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  23986523 ttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactat 23986610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 229707 - 229574
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgttt 278  Q
    |||||||||||||| ||||| || ||||||||||| || ||||||||||||||| || || ||||||||| |||||||  |||| ||||||   ||||||    
T  229707 aaggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatgttt 229608  T
Q  279 ttgtagttttagtcctacct-cttattttcaact 311  Q
    ||| ||||||| |||||||| |||||||||||||    
T  229607 ttgcagttttaatcctacctccttattttcaact 229574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 54440574 - 54440745
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg-tttttgtagt 285  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||| |||||| |||    
T  54440574 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatgttttttgcagt 54440673  T
Q  286 tttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||| || | |||||||||||| || || | | ||||| |||| |||||| || ||| ||||||||    
T  54440674 tttagtcctatctccctattttcaacttcagaaatgcacagaaatgacagttttagtccaaccacctatgct 54440745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 176 - 274
Target Start/End: Complemental strand, 51310059 - 51309961
Alignment:
Q  176 aagtaaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||| |||||| || ||||| |||||||||||| | || |||||||||||||||||| || |||||||||||||||||| |||||||||||||    
T  51310059 aagttaaaggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactat 51309961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 320
Target Start/End: Original strand, 18965143 - 18965280
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||||||||||||||||| |||||| |   ||||||||||| |||| || || |||||||||||||||||  |||| ||||||   ||||||||| |    
T  18965143 ttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaactatcatgtttttgca 18965242  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacg 320  Q
    |||||||| |||||| ||||||||||||| ||| ||||    
T  18965243 gttttagttctacctccttattttcaactctagaaacg 18965280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 328
Target Start/End: Complemental strand, 24336306 - 24336161
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||||||||||||||||||||  | ||||||||||||||| || || |||||||||||||||||| || |||||| |||     ||||||     
T  24336306 ttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgc 24336207  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaa 328  Q
      ||||||||||||| | |||||||||||  || |||||| |||||    
T  24336206 tcttttagtcctaccccatattttcaactccagaaacgtatagaaa 24336161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 24335764 - 24335892
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||| |||||| ||||||||| || |||||||||||||||||| || |||||||||||||||||| ||  || ||||||     ||||||     
T  24335764 ttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtatctgaactatcatgttttttgg 24335863  T
Q  283 agttttagtcctacctcttattttcaact 311  Q
    ||||||||||||||  | |||||||||||    
T  24335864 agttttagtcctacaccctattttcaact 24335892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 229160 - 229292
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttt 279  Q
    ||||||||||||| ||||| |||||| ||||||| || ||| ||||||||||| || || |||||||| ||||||||  |||| ||||||   |||||||    
T  229160 aggtttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatcatgtttt 229259  T
Q  280 tgtagttttagtcctac-ctcttattttcaact 311  Q
    || ||||||||| |||| | |||||||||||||    
T  229260 tgcagttttagttctactcccttattttcaact 229292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 10795854 - 10795733
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgtagtt 286  Q
    ||||||||| ||||||||| |||||||||| || ||||||||| ||||| | ||| |||||||||||||||||  ||| |||||||   |||||  ||||    
T  10795854 ttaattacacttttgatccccgcattttgaacagctcacgaaattggtcctctctctttcaaatcgaacaaaatcgtctctaaact---ttttttcagtt 10795758  T
Q  287 ttagtcctacctcttattttcaact 311  Q
    |||||| || || ||||||||||||    
T  10795757 ttagtcatatcttttattttcaact 10795733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 28166003 - 28166135
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta---tgtttt 279  Q
    ||||||||||| ||||||| ||||   ||||||| |||||||||||||||||| | ||| ||| ||||||||||||| ||||| |||||||   | ||||    
T  28166003 aggtttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatattttttt 28166102  T
Q  280 tgtagttttagtcctacct-cttattttcaact 311  Q
    || ||||||||||||| || | |||||||||||    
T  28166103 tgcagttttagtcctatctccctattttcaact 28166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 355
Target Start/End: Complemental strand, 56077867 - 56077695
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||||||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    |||||| |    
T  56077867 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 56077768  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgc 355  Q
    |||||||||||| || | ||||| ||||| ||| |||| | | ||| |||| |||||| || ||| |||||||    
T  56077767 gttttagtcctatctccctatttccaactctagaaacgcacaaaaatgacagttttagtccaaccacctatgc 56077695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 185 - 356
Target Start/End: Original strand, 14439829 - 14440004
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttg 281  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||| |||||||  || ||| ||||  |||||||  |||||||||||||    ||||||    
T  14439829 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttg 14439928  T
Q  282 tagttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
     ||||||||||||| || | ||||| |||||  || |||| | ||||| |||| |||||| || ||| ||||||||    
T  14439929 cagttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 34789926 - 34789839
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| ||||||||||||| ||||||||||||||    
T  34789926 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat 34789839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 34807119 - 34807202
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||||||| ||||| |||| |||||||||||||||||||||| |||||||  || ||| |||||||||||||  |||||||||    
T  34807119 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaa 34807202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 35193845 - 35193718
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg----tttttgt 282  Q
    ||||||||| ||||| |||| |||||||||| | ||||||||||||||| || || ||||||||| |||||||| |||| ||||||||     ||||||     
T  35193845 ttaattacacttttggtccttgcattttgataagctcacgaaaatggtcctgcctctttcaaatctaacaaaaccgtcc-taaactatcatgttttttga 35193747  T
Q  283 agttttagtcctacctcttattttcaact 311  Q
     ||||||||| |||||| |||||||||||    
T  35193746 tgttttagtcatacctcctattttcaact 35193718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 280
Target Start/End: Complemental strand, 21034785 - 21034687
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgttttt 280  Q
    |||| ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| | ||| ||| |||||||||||||  |||||| |||||| |||||    
T  21034785 aaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatattttt 21034687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 34789385 - 34789496
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    |||||| |    
T  34789385 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 34789484  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  34789485 gttttagtccta 34789496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 54441112 - 54441001
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  ||||||||||| ||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    |||||| |    
T  54441112 ttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 54441013  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  54441012 gttttagtccta 54441001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 6616670 - 6616762
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||||| ||||| | ||  ||||||||||||||||||||||||||| | | | ||| |||||||||||||  |||| ||||||||    
T  6616670 aaggtttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactat 6616762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 21034238 - 21034325
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  21034238 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 21034325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 26974788 - 26974701
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||||| |||| |||||||||  || |||||||| ||||| |  || ||| ||||||||||||| ||||||||||||||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactat 26974701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 28465624 - 28465537
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  28465624 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 28465537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 33777631 - 33777722
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||| ||||  |||||||| ||||||||||||||| |||| | | ||| |||||||||||||  |||| ||||||||    
T  33777631 aggtttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactat 33777722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 41608374 - 41608449
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||||||||| ||||| |||| ||||||||||||||||| |||| |||||||  || ||| |||||||||||||    
T  41608374 ggtttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaa 41608449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 46737198 - 46737111
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    
T  46737198 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 46737111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 12593566 - 12593438
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| |||||||  || ||| |||||||||||||  |||  ||||||||    |||||| |    
T  12593566 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatattttttgca 12593467  T
Q  284 gttttagtcctacct-cttattttcaact 311  Q
    |||||||||||| || | |||||||||||    
T  12593466 gttttagtcctatctccctattttcaact 12593438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 26974279 - 26974373
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| ||||||||| ||||| ||||  |||||| |  ||||||||||||||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  26974279 aaaaggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 26974373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 270
Target Start/End: Original strand, 51309680 - 51309753
Alignment:
Q  197 ttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||| |||||| ||||| || | |||||||||||| |||||  | ||||||||||||||||||||||||||||    
T  51309680 ttttggtcctcgtatttttattagctcacgaaaatgatcatgcgtctttcaaatcgaacaaaactgtccctaaa 51309753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 6617208 - 6617112
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgttttt 280  Q
    |||||||||||||||||| | || |||||||||  ||||||||||| ||||| |  || ||| |||||||| ||||  ||||||||||||| |||||    
T  6617208 ggtttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatattttt 6617112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 12593022 - 12593114
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| ||||  || ||||| ||||||||||||||||||||  || ||| |||||||||||||  |||| ||||||||    
T  12593022 aaggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaactat 12593114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 33689832 - 33689939
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttttgtag 284  Q
    ||||||||| ||||| |||| ||||||||| |||||||| ||| ||||| |  || ||| |||||||||||||  |||| |||||  |||||||||| ||    
T  33689832 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttgcag 33689931  T
Q  285 ttttagtc 292  Q
    ||||||||    
T  33689932 ttttagtc 33689939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 41114155 - 41114247
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||| ||| ||||| ||||  |||||||| ||||||||||||| |||| | ||| ||| |||||||||||||  |||| ||||||||    
T  41114155 aaggtttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactat 41114247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 24851319 - 24851406
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||||||  | ||| ||| |||| ||||||||  |||| ||||||||    
T  24851319 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactat 24851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 16690933 - 16690987
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||||||||||||||| |||| |  |||||||| ||||||||||||||||    
T  16690933 aaaggtttaattacatttttggtccttgtgttttgatctactcacgaaaatggtc 16690987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 259
Target Start/End: Original strand, 36168326 - 36168404
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||| ||||| |||| ||||||||| |||| ||||||| ||||| |  || ||| |||||||||||||    
T  36168326 aaaggtttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaa 36168404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 45839099 - 45839006
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||||||| ||||| ||||   ||||||| ||||||||| |||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  45839099 aaaaggtttaattacacttttggtcctactattttgaccaactcacg-aaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 45839006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 282
Target Start/End: Complemental strand, 30598059 - 30597967
Alignment:
Q  190 attacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgt 282  Q
    |||||| ||||| ||||||  |||||| ||||||||| || ||||  ||||| ||| |||||||||||||  ||||||||| ||| |||||||    
T  30598059 attacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatatttttgt 30597967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 46736681 - 46736745
Alignment:
Q  210 attttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| |||||||||||||||||| | | | ||| ||||||||||||| ||||| ||||||||    
T  46736681 attttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactat 46736745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 55677506 - 55677414
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| |||| | ||||||| |||||||||||| ||||| |  || ||| |||||||||||||  ||| |||||||||    
T  55677506 aaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactat 55677414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 14440371 - 14440198
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||| | ||||| ||||  |||||||| ||||| |||||||||||| | ||| ||| |||||||||||||   ||| ||||||||    |||||| |    
T  14440371 ttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgttttttgca 14440272  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||| || || | ||||| ||||| ||| |||| | ||||| |||| |||||| || ||| ||||||||    
T  14440271 gttttagtcatatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 19528872 - 19528984
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt----ttttgt 282  Q
    ||||||||| ||||| |||| ||||||||| ||| |||||||| ||||| |  || ||| |||||||| ||||  ||||||||||||| |    |||||     
T  19528872 ttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatgtttttttgc 19528971  T
Q  283 agttttagtccta 295  Q
    |||||||||||||    
T  19528972 agttttagtccta 19528984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 24852009 - 24851922
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| | ||||| |||| ||||||||| |||||||||||| || || |  || ||| |||||||||||||  |||||||||||||    
T  24852009 ttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactat 24851922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 195 - 258
Target Start/End: Complemental strand, 37336683 - 37336620
Alignment:
Q  195 atttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaa 258  Q
    ||||||| |||||||||||| | ||||||||||||  ||| || ||| ||||||||||||||||    
T  37336683 atttttggtcctcgcattttaaccaactcacgaaataggttatctctttttcaaatcgaacaaa 37336620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 51020934 - 51020973
Alignment:
Q  317 aacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  51020934 aacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 258
Target Start/End: Original strand, 51640955 - 51641034
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaa 258  Q
    ||||||||||||||||||||||| |  |||| ||| || |||||||| ||| ||||| || || ||| ||||||||||||    
T  51640955 taaaaggtttaattacatttttggttttcgcttttagaccaactcacaaaattggtcctgccttttttaaatcgaacaaa 51641034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 1397598 - 1397683
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact 272  Q
    ||||||||| |||||||||   |||||||| |||||||  ||||||||| | ||| ||| |||||||||||||  |||| ||||||    
T  1397598 ttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 16215040 - 16214951
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| | ||||| ||||  |||||||||||||| ||||||||| |||| ||| ||| |||| ||| ||||  |||| ||||||||    
T  16215040 gtttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactat 16214951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 295
Target Start/End: Original strand, 45838554 - 45838661
Alignment:
Q  191 ttacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtagttt 287  Q
    ||||| ||||| |||| | ||||||| ||||||||| || ||||| |  || ||| |||||||||||||  |||||||||||||    |||||| |||||    
T  45838554 ttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttt 45838653  T
Q  288 tagtccta 295  Q
    ||||||||    
T  45838654 tagtccta 45838661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 28143572 - 28143400
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    |||||| || ||||| |||||||||||||| || ||||||||||||||| || || |||||||||||||||||  |||||||||||||   ||||||| |    
T  28143572 ttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtttttgca 28143473  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||| || |||||||||||  || |||| ||||||| |||| ||||||||||||||||||||||    
T  28143472 gttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 338
Target Start/End: Complemental strand, 31797327 - 31797166
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gt 276  Q
    |||||| ||||||||| ||||| ||||| |||||||| || |||||||||||||||||| || |||||||||||||||||| |||||||||||||    |    
T  31797327 aaaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatatgtt 31797228  T
Q  277 ttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacattttt 338  Q
    ||||| ||||||||||||||||| ||||||||||| ||| |||| ||||||| |||| ||||    
T  31797227 ttttgcagttttagtcctacctcctattttcaactctagaaacgcagagaaatgacagtttt 31797166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 43160012 - 43160141
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg----tttttgt 282  Q
    ||||||||||||||| |||| |||||||||||||||||||||| |||||||  || ||| |||||||||||||  |||||||||||||     ||||||     
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgc 43160111  T
Q  283 agttttagtcctacct-cttattttcaact 311  Q
    ||||||||||||| || | |||||||||||    
T  43160112 agttttagtcctatctccctattttcaact 43160141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 14942389 - 14942259
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta------tgttttt 280  Q
    ||||||||| ||||| || ||||||||||| || ||||||||||||||| ||||| ||||||||||||||||| ||||| |||| ||      | |||||    
T  14942389 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgtttttttt 14942290  T
Q  281 gtagttttagtcctacctcttattttcaact 311  Q
    | |||||||||||||| || |||||||||||    
T  14942289 gcagttttagtcctacatcctattttcaact 14942259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 273
Target Start/End: Complemental strand, 42192792 - 42192700
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta 273  Q
    ||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||| |  || ||| |||||||||||||  ||||||||||||    
T  42192792 aaaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 42192700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 181 - 292
Target Start/End: Complemental strand, 44220194 - 44220080
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtt 277  Q
    ||||| ||||||||| ||||  |||||||||||||| ||||||||||||||||||||  || ||| ||||| |||||||  |||||||||||||    ||    
T  44220194 aaaggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgttt 44220095  T
Q  278 tttgtagttttagtc 292  Q
    |||||||||||||||    
T  44220094 tttgtagttttagtc 44220080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 340
Target Start/End: Original strand, 33920615 - 33920772
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| || ||||  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgca 33920714  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    |||||||||||| || | |||||||||||  || |||| | ||||| |||| ||||||    
T  33920715 gttttagtcctatctccctattttcaactccagaaacgcatagaaatgacagttttag 33920772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 42192243 - 42192354
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  42192243 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 42192342  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  42192343 gttttagtccta 42192354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 38008501 - 38008383
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gt 276  Q
    |||||| ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    |    
T  38008501 aaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 38008402  T
Q  277 ttttgtagttttagtccta 295  Q
    ||||| |||||||||||||    
T  38008401 ttttgcagttttagtccta 38008383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 63511 - 63420
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||| ||||||| |||| | ||||||| |||||||||||||||||| | ||| ||| ||||| |||||||  |||||||||||||    
T  63511 aggtttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaactat 63420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 356
Target Start/End: Complemental strand, 9330340 - 9330164
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgttttt 280  Q
    ||||||||||| ||||| |||| ||||||||| |||||||||||| | |||||  || ||| |||||||||||||  ||||| ||||||    | |||||    
T  9330340 gtttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatatgttttttt 9330241  T
Q  281 gtagttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    | ||||||||||||| || | ||||||||||| ||| |||  | ||||| |||| |||||| || ||| ||||||||    
T  9330240 gcagttttagtcctatctacctattttcaactatagaaacacatagaaatgacagttttagtccaaccacctatgct 9330164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 15550672 - 15550788
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt----tt 278  Q
    ||||||||||||| |||||||||| ||||| ||| |||||||||||| ||||| |  || ||| |||||||||||||  ||||||||||||| |    ||    
T  15550672 aggtttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 15550771  T
Q  279 ttgtagttttagtccta 295  Q
    ||| |||||||||||||    
T  15550772 ttgcagttttagtccta 15550788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 20495192 - 20495283
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||| || ||||| | |||||||||||| ||||||||||||||| ||||| || ||| ||||| |||||||  |||||||||||||    
T  20495192 aggtttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactat 20495283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 4355758 - 4355886
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||| ||||||||| | |||||||||| |||||||  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 4355857  T
Q  284 gttttagtcctacct-cttattttcaact 311  Q
    |||||||||||| || | |||||||||||    
T  4355858 gttttagtcctatctccctattttcaact 4355886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 33921155 - 33920981
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgtttttgt 282  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||  |||||||    | ||||||     
T  33921155 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttttgc 33921056  T
Q  283 agttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||| || | ||||| ||||| ||| |||| | ||||| |||| |||||| || ||| ||||||||    
T  33921055 agttttagtcctatctccctatttccaactctagaaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 5560049 - 5560141
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| ||||  |||||||| |||||||||||||||||||| ||| ||| |||| ||||||||  |||| ||||||||    
T  5560049 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactat 5560141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 6949446 - 6949526
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||| ||||||||||||||| ||||  ||||||||  ||||||||||||||||| | ||| ||| |||||||||||||    
T  6949446 taaaaggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 6949526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 4356299 - 4356212
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| |||||||||| ||||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  4356299 ttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 4356212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 13315492 - 13315583
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||  ||||  |||||||| ||||||| |||||||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  13315492 aggtttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 13315583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 38007953 - 38008040
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    
T  38007953 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 38008040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 295
Target Start/End: Original strand, 20127732 - 20127851
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt--- 276  Q
    |||||| ||||||||| ||||| ||||  |||||||| ||| |||||||||||||| | ||| ||| |||||||||||||  |||| |||||||| |       
T  20127732 aaaaggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 20127831  T
Q  277 -ttttgtagttttagtccta 295  Q
     ||||| |||||||||||||    
T  20127832 tttttgcagttttagtccta 20127851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 11539634 - 11539752
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt---- 276  Q
    ||||| ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | | | ||| |||||||||||||  |||| |||||||| |        
T  11539634 aaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgttt 11539733  T
Q  277 ttttgtagttttagtccta 295  Q
    ||||| |||||||||||||    
T  11539734 ttttgcagttttagtccta 11539752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 16953477 - 16953366
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||| ||||||||| ||||||| |||| ||||| |  || ||| ||||||||||||| |||||||||| |||    |||||| |    
T  16953477 ttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttgca 16953378  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  16953377 gttttagtccta 16953366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 32418157 - 32418333
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttt 278  Q
    |||| ||||||||| || || |||| ||||||||| |||||||||||| ||||| |  || |||  ||||||||||||  |||||||||||||    |||    
T  32418157 aaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactatatatttt 32418254  T
Q  279 ttgtagttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||| |||||||||| || || ||||||| |||||  || |||| | ||||| ||||||||||| || ||| ||||||||    
T  32418255 ttgcagttttagtcatatctccttatttccaactccagaaacgcacagaaatgacatttttagtccaaccacctatgct 32418333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 4808882 - 4809055
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||||||||  | || ||||||||| |||||||||||| || || |  || ||| |||||||||||||  |||| ||||||||    ||||||||    
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgta 4808981  T
Q  284 gttttagtccta-cctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| | || ||||| |||||  || |||| | ||||| |||| |||||| || ||| ||||||||    
T  4808982 gttttagtcctatcttcctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 11540181 - 11540094
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| | ||||| || ||||||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    
T  11540181 ttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactat 11540094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 24140217 - 24140130
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||||||| |||| |||||||||||||||||| |  || ||| ||||| |||||||  |||| ||||||||    
T  24140217 ttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactat 24140130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 43216252 - 43216079
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||  |||| || |||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  43216252 ttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgca 43216153  T
Q  284 gttttagtcctacctct-tattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| |||| ||||| |||||  || || | | ||||| |||| |||||| || ||| ||||||||    
T  43216152 gttttagtcctatctctctatttccaactccagaaatgcacagaaatgacaattttagtccaaccacctatgct 43216079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 3824256 - 3824178
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaac 260  Q
    |||||||||||| | ||||| || ||||||||| | |||||||||||| |||||||| |  ||| ||||||||||||||    
T  3824256 aaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaac 3824178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 5035903 - 5035953
Alignment:
Q  224 acgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||| ||||| ||| |||||||||||||| |||||||||||||    
T  5035903 acgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactat 5035953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 62960 - 63071
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| || || ||||  |||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    |||||| |    
T  62960 ttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgttttttgca 63059  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  63060 gttttagtccta 63071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 2190609 - 2190536
Alignment:
Q  197 ttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||| || ||||||||||| || ||||||||| ||||| || || |||||||||||||||||  |||||||||    
T  2190609 ttttggtcatcgcattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaa 2190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 280
Target Start/End: Complemental strand, 6949987 - 6949894
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgttttt 280  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |   | ||| |||| ||||||||  ||||||||||||| |||||    
T  6949987 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttt 6949894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 44219647 - 44219758
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  ||||||||||||||||| |||||| || |  || ||| ||||||||||||| ||||| |||| |||    |||||| |    
T  44219647 ttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgttttttgca 44219746  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  44219747 gttttagtccta 44219758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 649525 - 649617
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| |||| |||| |||| ||||| |||||| ||||| |  || ||| |||||||||||||  |||||||||||||    
T  649525 aaggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 649617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 649880 - 649808
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | | | ||| |||||||||||||    
T  649880 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaa 649808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 15551222 - 15551146
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||| |||||  |||  |||||||| |||||||| ||||||||||| | | ||| |||||||||||||    
T  15551222 aggtttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaa 15551146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 16952933 - 16953025
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||| | ||||| ||||  |||||||| |||||||||||||| ||| | ||| ||| |||||||||||||  |||| ||||||||    
T  16952933 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactat 16953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 17060904 - 17060996
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||| | ||||| ||||  |||||||| |||||||||||||| ||| | ||| ||| |||||||||||||  |||| ||||||||    
T  17060904 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactat 17060996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 186 - 273
Target Start/End: Complemental strand, 5037241 - 5037155
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta 273  Q
    ||||||| ||||||| |||||| ||||||||||   ||| ||||||||||||| || ||| |||| ||||||||  ||||||||||||    
T  5037241 tttaattgcattttt-atcctcacattttgatcggttcatgaaaatggtcatgcctcttttaaattgaacaaaatcgtccctaaacta 5037155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 270
Target Start/End: Complemental strand, 25336143 - 25336060
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |   | ||| |||||||||||||  |||||||||    
T  25336143 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaa 25336060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Original strand, 43058470 - 43058509
Alignment:
Q  317 aacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  43058470 aacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 274
Target Start/End: Complemental strand, 16175892 - 16175806
Alignment:
Q  188 taattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||| ||||| ||||  |||||| | |||||||||||| |||||||  || ||| |||||||||||||  |||| ||||||||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactat 16175806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 43160561 - 43160467
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| ||||||||| ||| | ||||  ||||||||  ||||||||||||||||| | ||| ||| ||||||||| |||  |||| ||||||||    
T  43160561 aaaaggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaactaaatcgtccttaaactat 43160467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 13399940 - 13399876
Alignment:
Q  209 cattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||| |||||||||||||||||| | | | ||| ||||||||||||| ||||| ||||||||    
T  13399940 cattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactat 13399876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 295
Target Start/End: Complemental strand, 4809429 - 4809311
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gt 276  Q
    |||||| ||||||||| ||||| ||||  ||||||||  ||||||||||||||||| | | | ||| |||| |||||||   |||| ||||||||    |    
T  4809429 aaaaggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactatatgtt 4809330  T
Q  277 ttttgtagttttagtccta 295  Q
    ||||| |||||||||||||    
T  4809329 ttttgcagttttagtccta 4809311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 234
Target Start/End: Original strand, 9329829 - 9329881
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatc-aactcacgaaaatggt 234  Q
    ||||||||||||| ||||| ||||  |||||||||| ||||||||||||||||    
T  9329829 aggtttaattacacttttggtcctatcattttgatctaactcacgaaaatggt 9329881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 5e-38; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 20 - 141
Target Start/End: Complemental strand, 13824957 - 13824832
Alignment:
Q  20 aaccgtggtaaagttgtttcagagtggctcgtgaagtgattcaaaaatagacattgcaaagaggatcatctgca----agcacgacaccttttagatttt 115  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||| |||||||||||    
T  13824957 aaccgtggtagagttgtttcatagtggctcgtgaagtgattcaaaaatagacattgcaaagaggatcatctgcaagcaagcaggacactttttagatttt 13824858  T
Q  116 gagtgtgatgtggtacaaagtaaaag 141  Q
    ||||||||||| ||| ||| ||||||    
T  13824857 gagtgtgatgtagtaaaaaataaaag 13824832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 340
Target Start/End: Original strand, 10721789 - 10721945
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||||||||| ||||| |||||||| || ||||||||||||||| ||||| |||||||||||||||||  || ||||||||||     ||||||     
T  10721789 ttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgt-cctaaactatcatgttttttgc 10721887  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||||||||||||||||| |||||||||||  || |||||||||||| |||| ||||||    
T  10721888 agttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttag 10721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 342
Target Start/End: Complemental strand, 41834610 - 41834443
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----- 273  Q
    ||||||| ||||||||| ||||| |||||||||||||| || ||||||||||||||| || || ||||| |||||||||||| || |||||||||         
T  41834610 taaaaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgt-cctaaactatcatg 41834512  T
Q  274 tgtttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagac 342  Q
    | |||||| ||||||||||||||||| ||||||||||| | | |||| ||||||| |||| ||||||||    
T  41834511 tttttttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 183 - 308
Target Start/End: Complemental strand, 20266462 - 20266333
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gttt 278  Q
    |||||||||| || ||||| |||||| ||||||| || || |||||||||||||||||| |||||||||||||||||  |||||||||||||    |||     
T  20266462 aggtttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaactatcatggttg 20266363  T
Q  279 ttgtagttttagtcctacctcttattttca 308  Q
    ||||||||||||||||||| | ||||||||    
T  20266362 ttgtagttttagtcctaccccctattttca 20266333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 196 - 354
Target Start/End: Original strand, 32305830 - 32305991
Alignment:
Q  196 tttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtagttttagtc 292  Q
    |||||| || |||||||||||||| ||||||||||| ||  |  || ||| |||||||||||||  |||||||||||||   ||||||| ||||||||||    
T  32305830 tttttggtcatcgcattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatgtttttgcagttttagtc 32305929  T
Q  293 ctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatg 354  Q
    |||||||||||||||||||  || |||  ||||||| |||| |||||||| ||||| |||||    
T  32305930 ctacctcttattttcaactccagaaacacagagaaatgacagttttagacttacccgctatg 32305991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 27307603 - 27307428
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt------tttt 280  Q
    ||||||| | ||||| ||| |||||||||| ||  |||||||||||||  |  || |||||||||||||||||| |||| |||||||| |      ||||    
T  27307603 ttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatgttttttttt 27307504  T
Q  281 gtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||||||||| |||||||||||  || || | ||||||| |||||||||||| | ||||||||||||    
T  27307503 gtagttttagtcctacctcctattttcaactccagaaatgcagagaaatgacatttttagatccaccccctatgct 27307428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 15115635 - 15115530
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgtagtt 286  Q
    ||||||||| ||||||||||| |||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||| |||||||| |||||| ||||    
T  15115635 ttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatttttgcagtt 15115536  T
Q  287 ttagtc 292  Q
    ||||||    
T  15115535 ttagtc 15115530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 16752585 - 16752757
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||  ||||||||| || |||||||||||| |||||  | |||||||||||||||||  |||| ||||||||    |||||| |    
T  16752585 ttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatgttttttgca 16752684  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||| ||| |||||| |||||||||||  |  |||| | ||||| || | ||||||||||||||||||||||    
T  16752685 gtttttgtcatacctcctattttcaactccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 22651348 - 22651476
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||||||||||| | |||| ||||||| || |||||| ||||||||||| || ||| ||||| ||||||||  ||| ||||||   ||||||||| |    
T  22651348 ttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatgtttttgca 22651447  T
Q  284 gttttagtcctacct-cttattttcaact 311  Q
    ||||||||||||||| |||||||||||||    
T  22651448 gttttagtcctacctccttattttcaact 22651476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 210 - 356
Target Start/End: Complemental strand, 28495351 - 28495211
Alignment:
Q  210 attttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgtagttttagtcctacctcttattttcaa 309  Q
    ||||||| || |||||||||||||||||| || ||||||||||||||||| |||||||        |||||| ||||||||||||||||| |||||||||    
T  28495351 attttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaattgtccct------gttttttgcagttttagtcctacctcctattttcaa 28495258  T
Q  310 ctttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||  || | || ||||||| || | ||||||||||||| | ||||||    
T  28495257 ctccagaaccgcagagaaatgatagttttagacctacctcatatgct 28495211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 14340400 - 14340473
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||| | ||| ||| |||||||||||||    
T  14340400 tttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 14340473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 274
Target Start/End: Original strand, 4966818 - 4966906
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||| ||  || || ||| |||||||||||||  |||||||||||||    
T  4966818 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactat 4966906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 340
Target Start/End: Original strand, 28494847 - 28495003
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||||| ||||  |||||||| ||  ||| |||||||||  || || ||||||||||||||||||||| ||||||||||     ||||||     
T  28494847 ttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgt-cctaaactatcatgttttttgc 28494945  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||||||||||||||||| |||||||||||  || |||| ||||||  |||| ||||||    
T  28494946 agttttagtcctacctcctattttcaactccagaaacgcagagaagtgacaattttag 28495003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 340
Target Start/End: Complemental strand, 14340954 - 14340793
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta------tgtttt 279  Q
    |||||||||||||||| | || ||||||||| |||||||||||| |||||||   | ||| |||||||||||||  |||| |||||||      | ||||    
T  14340954 tttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatatttttttt 14340855  T
Q  280 tgtagttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    |||||||||||||||| || ||||||| |||||  |  |||||||||||| |||| ||||||    
T  14340854 tgtagttttagtcctatctccttatttccaactccaaaaacgtagagaaatgacagttttag 14340793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 340
Target Start/End: Original strand, 27307058 - 27307220
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gt 276  Q
    ||||| ||||||||| ||||| | |||||||||||| ||||| | |||||||||||||| | |||||||| |||||||| |   ||||||||||     |    
T  27307058 aaaggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaa-tcatcctaaactatcatgtt 27307156  T
Q  277 ttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||||| |||||||||| |||||| |||||||||||  || |||| | ||||| |||| ||||||    
T  27307157 ttttgcagttttagtcttacctcctattttcaactccagaaacgcatagaaatgacagttttag 27307220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 202 - 328
Target Start/End: Original strand, 13557010 - 13557139
Alignment:
Q  202 atcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgtagttttagtcctacc 297  Q
    ||||||||||||||| || |||||||||||||||||| || ||||||||| |||||||  || | ||||||||     |||||| ||||||||||||||     
T  13557010 atcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgt-cttaaactatcatgttttttgcagttttagtcctaca 13557108  T
Q  298 tcttattttcaactttagtaacgtagagaaa 328  Q
    ||||||||| ||||  || |||| |||||||    
T  13557109 tcttattttgaactgcagaaacgcagagaaa 13557139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 16753113 - 16753040
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaac 260  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||||  || || ||||||||||||| ||||    
T  16753113 ttaattacatttttggtcatcgcattttgaccaactcacgaaaatggttctgcctctttcaaatcgaacgaaac 16753040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 18149736 - 18149847
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||||||||  ||||| || |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    |||||| |    
T  18149736 ttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 18149835  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  18149836 gttttagtccta 18149847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 270
Target Start/End: Original strand, 28289682 - 28289770
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    |||| ||||||||| |||||||||| ||||||||| |||||||||||| | |||||  || ||| |||||||||||||  |||||||||    
T  28289682 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaa 28289770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 38900648 - 38900758
Alignment:
Q  188 taattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtag 284  Q
    |||||||| ||||| |||||||||||||| ||||||||||||||| || |  || ||| |||||||||||||  ||||||||| |||    |||||| ||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcag 38900747  T
Q  285 ttttagtccta 295  Q
    |||||||||||    
T  38900748 ttttagtccta 38900758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 4967314 - 4967227
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||| |||||||| |||||||| ||||||||| |  || ||| |||||||||||||  |||||||||||||    
T  4967314 ttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactat 4967227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 15029852 - 15029765
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    
T  15029852 ttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactat 15029765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 22651854 - 22651767
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||  |||||||||||||| || ||||||||||||||  || || |||||||||||||||||  |||| ||||||||    
T  22651854 ttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 28290187 - 28290076
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||  ||| |||||||||||||  |||| ||||||||    |||||| |    
T  28290187 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 28290088  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  28290087 gttttagtccta 28290076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 270
Target Start/End: Complemental strand, 5162120 - 5162029
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||||| |||||||||||||| ||||| ||||||||| ||||||| || | | |||||  || ||| |||||||||||||  |||||||||    
T  5162120 taaaaggcttaattacattttttatccttgcattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaa 5162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 8419163 - 8419053
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttttgtag 284  Q
    ||||||||| ||||| ||||  |||||||| ||||||||||| |||||| | ||| ||| |||| ||||||||  |||| |||||  ||| |||||| ||    
T  8419163 ttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatttttttgcag 8419064  T
Q  285 ttttagtccta 295  Q
    |||||||||||    
T  8419063 ttttagtccta 8419053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 17260763 - 17260676
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| || ||||| |||||||||||||| ||| ||||||||||| |  |  || ||||||||||||||||||  ||||||||||||    
T  17260763 ttaattgcacttttggtcctcgcattttgaccaattcacgaaaatgattctacctctttcaaatcgaacaaaaccatccctaaactat 17260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 266
Target Start/End: Original strand, 25973838 - 25973920
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccc 266  Q
    |||||||||  ||||||  ||||||||||| || | |||||||||| |||||||| || |||| ||||||||||||| |||||    
T  25973838 ggtttaattgtattttttgtcctcgcatttagaccgactcacgaaattggtcatgcctttttcgaatcgaacaaaacagtccc 25973920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 274
Target Start/End: Original strand, 39083372 - 39083448
Alignment:
Q  198 tttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||  |||||||| |||||||||||||||||| | | | ||| ||||||||||||| ||| | ||||||||    
T  39083372 tttgatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactat 39083448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 356
Target Start/End: Complemental strand, 2865163 - 2865124
Alignment:
Q  317 aacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  2865163 aacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 19291359 - 19291446
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||   ||||||| |||||||| ||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  19291359 ttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 19291446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 21371239 - 21371152
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| |||||||||| ||||||||| |||||||  ||| ||||| |  || ||| ||||| |||||||  |||||||||||||    
T  21371239 ttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactat 21371152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 28595183 - 28595270
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| || ||||| |||||| ||||||| || || || ||||||||||||  | ||||||| |||||||||  |||||||||||||    
T  28595183 ttaattgcacttttggtcctcgtattttgaccagcttacaaaaatggtcatgcttctttcaaaacgaacaaaatcgtccctaaactat 28595270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 32697769 - 32697682
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| || | ||||||||| |||||||||||| ||||| |  || ||| |||||||||| ||  |||||||||||||    
T  32697769 ttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactat 32697682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 264
Target Start/End: Original strand, 9125865 - 9125942
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtc 264  Q
    |||||| || |||||||||||  ||||| | |||||||| ||  ||||||||||| |||| ||||||||||| |||||    
T  9125865 ttaatttcacttttgatcctcttattttaaccaactcacaaacttggtcatgtctttttcgaatcgaacaaagctgtc 9125942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 21370684 - 21370761
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||||||||| ||||||  ||||   ||||||| ||||| ||||||||||| || ||| ||| |||||||||||||    
T  21370684 aaggtttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaa 21370761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 21769579 - 21769632
Alignment:
Q  221 ctcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||  ||| || |||||||||||||||||| |||||||||||||    
T  21769579 ctcatgaaaatgggtatgcctctttcaaatcgaacaaaaccgtccctaaactat 21769632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 164596 - 164560
Alignment:
Q  320 gtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  164596 gtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 12220746 - 12220659
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatg-tctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| |||||||||  |||  |||| | ||||| |||||| |||||||| ||| |||||||||||||||||| ||||||| |||||    
T  12220746 ttaattatatttttgattttcgggttttaaccaactaacgaaattggtcatgctct-tttcaaatcgaacaaaacagtccctatactat 12220659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 5e-38; HSPs: 66)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 183 - 356
Target Start/End: Original strand, 27199701 - 27199878
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgttt 278  Q
    ||||||||||||||||||| |||||||||||||| || |||||||||||||||||| || |||||||||||||||||| ||| ||||||||    | |||    
T  27199701 aggtttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgttttt 27199800  T
Q  279 ttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||| ||||||||| |||| || ||||||||||| ||| |||| ||| |||   || ||||||||||||||||||||||    
T  27199801 ttgcagttttagtgctacatcctattttcaactctagaaacgcagataaatatcagttttagacctaccccctatgct 27199878  T

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Target: chr3; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 187 - 357
Target Start/End: Original strand, 49407799 - 49407972
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttt-tgta 283  Q
    ||||||||| ||||| |||||||||||||| || |||||||||||||||||| || |||||||| ||||||||| ||||||||||  |||||||| |  |    
T  49407799 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttgtaca 49407898  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgcta 357  Q
    ||||||||| |||||| |||||||||||  |  |||| ||||||| |||| |||||||||||||||||||||||    
T  49407899 gttttagtcatacctcctattttcaactccaaaaacgcagagaaatgacaattttagacctaccccctatgcta 49407972  T

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Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 55192121 - 55192293
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt---ttttgta 283  Q
    ||||||||| ||||  ||| |||||||||| || |||||||||||||||  | || ||||||||| |||||||| |||| |||||||| |   |||||||    
T  55192121 ttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatgttttttgta 55192220  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||||||| |||||||||||  || |||| ||||||| |||| ||||||||||||||||||||||    
T  55192221 gttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

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Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 37075689 - 37075864
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt------tttt 280  Q
    ||||||||| ||||| ||  |||||||||| |||||||||||||||||| || || ||||||||| |||||| | ||||||||||||| |      ||||    
T  37075689 ttaattacacttttggtctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatgttttttttt 37075788  T
Q  281 gtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    | |||||||||||||||||||||||||||||  || |||| ||||||| |||  ||||||||||||||||||||||    
T  37075789 gcagttttagtcctacctcttattttcaactccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

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Target: chr3; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 36701639 - 36701466
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||||| |||||||||||||| || ||||||||||||||||||||| |||||||||||||||||   ||||||||||||     ||||||     
T  36701639 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttgc 36701540  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||| |||||| |||||||||||  || |||  | ||||| | || ||||||||||||||| ||||||    
T  36701539 agttttagtcatacctcctattttcaactccagaaacacatagaaatggcagttttagacctaccccatatgct 36701466  T

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Target: chr3; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 205 - 356
Target Start/End: Complemental strand, 37847344 - 37847190
Alignment:
Q  205 ctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtagttttagtcctacctctt 301  Q
    ||||||||||||| | |||| |||||||||| || || |||||||||||||||| | |||||||||||||   ||||||| ||||||||||||| ||| |    
T  37847344 ctcgcattttgataagctcaggaaaatggtcttgcctctttcaaatcgaacaaagccgtccctaaactatcatgtttttgcagttttagtcctatctcct 37847245  T
Q  302 attttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||| || || | ||||||| |||| |||||||| ||||| |||||||    
T  37847244 attttcaacttcagaaatgcagagaaatgacaattttagacttacccactatgct 37847190  T

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Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 27200234 - 27200062
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||||| |||| ||||||||| || ||||||||||||||  || || ||||||||||||||| || || ||||||||||     ||||||     
T  27200234 ttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgt-cctaaactatcatgttttttgc 27200136  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||| |||||| |||||||||||  || |||| ||||||| ||||  |||||||||||||| ||||||    
T  27200135 agttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

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Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 36701104 - 36701196
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| |||||||||||||||||||||||||||||| ||||| || |||||||||||||||||  |||| ||||||||    
T  36701104 aaggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactat 36701196  T

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Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 50901070 - 50900898
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||||||||||||| || ||||| ||||||| | || || || ||||||||||||||| |||||||||||||    |||||| |    
T  50901070 ttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatgttttttgca 50900971  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||| |||||||||| |||||||||||  |  |||| | |||||   || ||||||| ||||||||||||||    
T  50900970 gtttttgtcctacctcctattttcaactccataaacgcaaagaaattgcagttttagatctaccccctatgct 50900898  T

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Target: chr3; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 186 - 340
Target Start/End: Original strand, 8873693 - 8873850
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtc----cctaaactatgtttttg 281  Q
    |||||||||||||| | |||||||||||||||||  | |||||||||||||||||| ||| |||||||||||||| |||    ||||   | | ||||||    
T  8873693 tttaattacattttgg-tcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaaccgtcataacctatcatgtttttttg 8873791  T
Q  282 tagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
     |||||||||| |||||| |||||||||||| || |||| ||||||| |||| ||||||    
T  8873792 cagttttagtcttacctcctattttcaacttcagaaacgcagagaaatgacagttttag 8873850  T

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Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 346
Target Start/End: Complemental strand, 49408324 - 49408163
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-----tgtttttg 281  Q
    ||||||||| ||||| | |||||||||||| || ||||||||||||||  ||||| ||||||||||||||||||||| |||||||||     | ||||||    
T  49408324 ttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgt-cctaaactatcatgtttttttg 49408226  T
Q  282 tagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctac 346  Q
     |||||||||||||||||  ||||||||||  || |||| | ||||| | || ||||||||||||    
T  49408225 cagttttagtcctacctc--attttcaactccagaaacgcaaagaaatggcagttttagacctac 49408163  T

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Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 33412697 - 33412610
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||||||||  ||||| |||| ||||||||||||  |||||||||||||    
T  33412697 ttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactat 33412610  T

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Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 40838651 - 40838742
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  || ||| ||||| |||||||  |||| ||||||||    
T  40838651 aggtttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactat 40838742  T

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Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 44677020 - 44676887
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttt 278  Q
    |||||||||||||| ||||| ||||  |||||||| |||||||||||||||||||| ||| ||| |||||||||||||  |||| ||||||||    |||    
T  44677020 aaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 44676921  T
Q  279 ttgtagttttagtcctacctct-tattttcaact 311  Q
    ||| | ||||||||||| |||| |||||||||||    
T  44676920 ttgcaattttagtcctatctctctattttcaact 44676887  T

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Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 37076217 - 37076145
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||  | || |||||||||||||||||    
T  37076217 ttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaa 37076145  T

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Target: chr3; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 51473404 - 51473312
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||||| ||||||||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  51473404 aaggtttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 51473312  T

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Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 274
Target Start/End: Original strand, 49951541 - 49951636
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  49951541 taaaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 49951636  T

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Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 270
Target Start/End: Original strand, 46013418 - 46013508
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    |||||| ||||||||| |||||||||| ||||||||| |||||||||||| |||||||  || ||| |||||||||||||  |||||||||    
T  46013418 aaaaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaa 46013508  T

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Target: chr3; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 210 - 340
Target Start/End: Original strand, 50900558 - 50900692
Alignment:
Q  210 attttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttttt--gtagttttagtcctacctcttatt 304  Q
    |||||||||| ||||||||||||||| |  || |||||||||||||||||| |||| ||||||||   ||||||  | ||||||||||||||||  ||||    
T  50900558 attttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttcgcagttttagtcctaccttctatt 50900656  T
Q  305 ttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||||||| ||| ||| |||||||| |||| ||||||    
T  50900657 ttcaactctagaaacatagagaaatgacagttttag 50900692  T

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Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 40275096 - 40275181
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact 272  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||||||| |  || ||| ||||||||||||| ||||||||||||    
T  40275096 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaact 40275181  T

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Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 16701340 - 16701248
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||||||||| ||||  |||||||| |||||||||||||||||||| ||| ||| || ||||||||||  |||| ||||||||    
T  16701340 aaggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactat 16701248  T

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Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 184 - 295
Target Start/End: Complemental strand, 40839198 - 40839084
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttttt 280  Q
    |||||||||||| ||||| ||||| ||||||||  ||||||||||||||||| |  || ||| |||||||||||||  |||||||||||||    |||||    
T  40839198 ggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 40839099  T
Q  281 gtagttttagtccta 295  Q
    | |||||||||||||    
T  40839098 gcagttttagtccta 40839084  T

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Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 43222393 - 43222480
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||| |||||| || || |||||||| |||||||||||||| || |||||| ||| |||||||||||||  |||||||||||||    
T  43222393 ttaattacgtttttggtcatcacattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactat 43222480  T

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Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 52236819 - 52236906
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||  |||||||||||||| ||| ||||||||||||||||  || ||| |||||||||||||  |||||||||||||    
T  52236819 ttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactat 52236906  T

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Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 330386 - 330292
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| |||||||||  |||| |||||||||||||| |||||||||||||||||| |  || ||| ||||| |||||||  |||||||||||||    
T  330386 aaaaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactat 330292  T

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Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 349
Target Start/End: Complemental strand, 8874232 - 8874063
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-----tgttt 278  Q
    |||||||||||| |||| |||| ||| |||||| || ||||||||||||||| ||  | ||| ||||||||||||||  |||||||||||     | |||    
T  8874232 ggtttaattacacttttcatccccgcgttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatgtttttt 8874133  T
Q  279 ttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctacccc 349  Q
    ||| ||||||||| ||||||  |||||||||||  || |||| | ||||| |||| |||||||| ||||||    
T  8874132 ttgcagttttagttctaccttctattttcaactccagaaacgca-agaaatgacagttttagacttacccc 8874063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 49720374 - 49720485
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| |||||||||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  ||||||||| |||    |||||| |    
T  49720374 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgttttttgca 49720473  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  49720474 gttttagtccta 49720485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 52237360 - 52237249
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||||||| |  || ||| |||||||||||||  ||||||||| |||    |||||| |    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgca 52237261  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  52237260 gttttagtccta 52237249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 299
Target Start/End: Complemental strand, 55390140 - 55390025
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||||||||||| | ||| |||||||||||||| |  || ||| ||||| |||||||  ||| |||||||||    ||||||||    
T  55390140 ttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgttttttgta 55390041  T
Q  284 gttttagtcctacctc 299  Q
    ||||||||||||||||    
T  55390040 gttttagtcctacctc 55390025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 12140933 - 12141065
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gt 276  Q
    |||||| ||| || || ||||| |||||| ||||| ||||  ||||||||||||||||| || |||||||||||| ||||| |||||||||||||   ||    
T  12140933 aaaaggcttacttgcacttttgttcctcgtatttttatcagatcacgaaaatggtcatgcctctttcaaatcgaagaaaac-gtccctaaactatcatgt 12141031  T
Q  277 ttttgt--agttttagtcctacctcttattttca 308  Q
    |||| |  ||||||||||||||| | ||||||||    
T  12141032 tttttttcagttttagtcctaccccctattttca 12141065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 311
Target Start/End: Complemental strand, 14654738 - 14654606
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg-tttt 279  Q
    ||||| ||||||||| ||||| |||| ||||||||| |||||||||||| |||   |  || ||| |||||||||||||  |||| ||||||||| ||||    
T  14654738 aaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaactatgttttt 14654639  T
Q  280 tgtagttttagtcctacct-cttattttcaact 311  Q
    || ||||||||||||| || ||||||| |||||    
T  14654638 tgcagttttagtcctatctccttatttccaact 14654606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 295
Target Start/End: Original strand, 22370598 - 22370711
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt----ttttg 281  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||||||| |  || ||| ||| | |||||||  ||||||||||||| |    |||||    
T  22370598 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttg 22370697  T
Q  282 tagttttagtccta 295  Q
     |||||||||||||    
T  22370698 cagttttagtccta 22370711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 49720909 - 49720817
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| ||||   ||||||| |||||||||||||||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  49720909 aaggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 49720817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 51827955 - 51828047
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactat 51828047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 43678298 - 43678385
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| ||||||||||| |||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  43678298 ttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactat 43678385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 50662955 - 50662782
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||| | ||||| ||||  ||||||||  ||||||||||||| ||||| ||| ||| |||||||||||||  |||| ||||||||    |||||| |    
T  50662955 ttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 50662856  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| || | |||||||||||  || |||| | ||||| |||| |||||| || ||| ||||||||    
T  50662855 gttttagtcctagctccctattttcaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 51828501 - 51828414
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  || ||||| |||||||||||||||||||| | | ||| ||||||||||||| ||||| ||||||||    
T  51828501 ttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactat 51828414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 52375874 - 52375787
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||||| |  || ||| |||| ||||||||  |||| ||||||||    
T  52375874 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactat 52375787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 276 - 350
Target Start/End: Complemental strand, 33412457 - 33412383
Alignment:
Q  276 tttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccc 350  Q
    |||||| ||||||||||||||||| ||||||||  ||||| |||| ||||||| || | ||||||||||||||||    
T  33412457 tttttgcagttttagtcctacctcctattttcatttttagaaacgcagagaaatgatagttttagacctaccccc 33412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 295
Target Start/End: Original strand, 16689357 - 16689472
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttt 279  Q
    ||||||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||| |||| |||    ||||    
T  16689357 aggtttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatgttttt 16689456  T
Q  280 tgtagttttagtccta 295  Q
    || |||||||||||||    
T  16689457 tgcagttttagtccta 16689472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 322
Target Start/End: Complemental strand, 41998777 - 41998633
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaa-actatg--tt 277  Q
    ||||| ||||||||| ||||| |||| ||||||||| ||||| |||||| ||||| |  || ||| |||||||||||||  ||||||||   ||||  ||    
T  41998777 aaaggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaactatatgtttt 41998678  T
Q  278 tttgtagttttagtcctacctcttattttcaactttagtaacgta 322  Q
    |||| ||||||||||||||  | ||||||||||| ||| ||||||    
T  41998677 tttgcagttttagtcctactccctattttcaactctagaaacgta 41998633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 43222933 - 43222848
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact 272  Q
    ||||| ||| ||||| ||||||||||||||  | | |||||||||||||||| || ||| |||||||||||||  |||||||||||    
T  43222933 ttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaact 43222848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 179 - 259
Target Start/End: Original strand, 2044266 - 2044346
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||| |||||| || ||||| | |||||||||||| ||||||| ||||||||||||  || ||| |||||||||||||    
T  2044266 taaaaggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaa 2044346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 2051298 - 2051370
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||    
T  2051298 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 2051370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 14654202 - 14654274
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||||| ||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||    
T  14654202 ttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 14654274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 30513725 - 30513797
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||| |||| |||||||||  ||||||||||||||||| | ||| ||| |||||||| ||||    
T  30513725 ttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaa 30513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 47431699 - 47431771
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| ||||  |||||||| ||||||||||||||||||||  || ||| |||||||||||||    
T  47431699 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaa 47431771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 49952089 - 49952017
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||    
T  49952089 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaa 49952017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 55389609 - 55389719
Alignment:
Q  188 taattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtag 284  Q
    |||||||| ||||| ||||| ||||| || |||||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    |||||| ||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 55389708  T
Q  285 ttttagtccta 295  Q
    |||||||||||    
T  55389709 ttttagtccta 55389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 2323378 - 2323509
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gttt 278  Q
    ||||||||||||||||||  |||||||||||||| ||  |||| |||||  |  || || ||||||||||||||||||  | ||||||||||     |||    
T  2323378 aggtttaattacattttttgtcctcgcattttgaccagttcacaaaaattatactgcctctttcaaatcgaacaaaaccat-cctaaactatcatgtttt 2323476  T
Q  279 ttgtagttttagtcctacctcttattttcaact 311  Q
    ||| | ||||||||||||||| |||||||||||    
T  2323477 ttgcaattttagtcctacctcctattttcaact 2323509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 12141234 - 12141147
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||||||||||| ||||  ||||| |||||||| |  || ||||||||||||||||||  || |||||||||    
T  12141234 ttaattacacttttgttcctcgcatttttatcagatcacgtaaatggtcctacctctttcaaatcgaacaaaaccatctctaaactat 12141147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 259
Target Start/End: Original strand, 25534886 - 25534965
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||| ||||||||| ||||| |||||||||||||| ||| ||| |||||||||| |  || ||| |||||||||||||    
T  25534886 aaaaggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaa 25534965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 38535312 - 38535399
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| ||||||| |||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  38535312 ttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 38535399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 41998232 - 41998319
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| |||||| ||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  41998232 ttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 41998319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 44676475 - 44676562
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||| |||||||||  |||||| |||| || ||||  || ||| |||||||||||||| |||||||||||||    
T  44676475 ttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactat 44676562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 52375330 - 52375417
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||| |||||| | ||| ||||||||||||||||  || ||| |||| ||||||||  |||||||||||||    
T  52375330 ttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactat 52375417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 39010073 - 39010163
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact 272  Q
    |||| ||||||||||||||| |||| ||||||||| |||||||| ||| || ||||  || ||| ||||||||||||| ||| | ||||||    
T  39010073 aaggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaact 39010163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 356
Target Start/End: Complemental strand, 34105199 - 34105018
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-----tg 275  Q
    |||| ||| |||||| ||||| |||| ||||||||| ||||| |||||  ||||| |  || ||| |||||||||||||  ||||||||||||     |     
T  34105199 aaagatttgattacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttt 34105100  T
Q  276 tttttgtagttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||| ||||||||||| | || ||||||| |||||| || |||| | ||||| |||| |||||| || ||| ||||||||    
T  34105099 tttttgcagttttagtcccatctccttatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 295
Target Start/End: Original strand, 329850 - 329960
Alignment:
Q  188 taattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtag 284  Q
    |||||||| ||||| | ||  |||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||| ||||||||    |||||| ||    
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 329949  T
Q  285 ttttagtccta 295  Q
    |||||||||||    
T  329950 ttttagtccta 329960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 235
Target Start/End: Original strand, 26274562 - 26274618
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    |||||||||||||||||||||||||||| | ||||||  | |||||||||| |||||    
T  26274562 taaaaggtttaattacatttttgatccttgtattttggactactcacgaaactggtc 26274618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 32730388 - 32730479
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||| |||| ||||||||| ||||||  |||| ||||| |  || ||| |||| ||||||||  |||||||||||||    
T  32730388 aggtttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactat 32730479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 40275636 - 40275550
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||| |||||||| ||||||||| |||||||| |  || ||| |||||||||||||  ||| |||||||||    
T  40275636 ttaattacacttttggtcctcacattttgaccaactcacg-aaatggtcctacctcttttaaatcgaacaaaatcgtctctaaactat 40275550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 43678827 - 43678740
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||| |||||||||||||||||||||  |||||    || ||| |||||||||||||  |||| ||||||||    
T  43678827 ttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactat 43678740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 51828534 - 51828654
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt-- 276  Q
    ||||||| ||||||||| ||||| |||| ||||||||| ||| | |||||| ||||| |  || ||| |||||||||||||  |||| |||||||| |      
T  51828534 taaaaggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgt 51828633  T
Q  277 --ttttgtagttttagtccta 295  Q
      ||||| |||||||||||||    
T  51828634 ttttttgcagttttagtccta 51828654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 295
Target Start/End: Complemental strand, 51829060 - 51828972
Alignment:
Q  210 attttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtagttttagtccta 295  Q
    |||||||||||||||||||||||||| | ||| ||| || || |||||||  |||| ||||||||    |||||| |||||||||||||    
T  51829060 attttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgttttttgcagttttagtccta 51828972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 25612522 - 25612442
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtc 264  Q
    |||||||||||| ||||| ||||||  |||||| | |||||||||| ||||| || |  ||| |||| |||||||||||||    
T  25612522 ggtttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtc 25612442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 79; Significance: 7e-37; HSPs: 6)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 205910 - 205738
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||||| ||||  ||||| |||||||| |||||||||||||||||| || || |||||||||||||||||| |||||||||||   ||||||||| |    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgtttttgca 205811  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||| || |||||||||||  |  |||| ||||||| | || ||||||||||||||||||||||    
T  205810 gttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 210885 - 210793
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| ||||| |||||||| ||||||| |||||||||| || || |||||||||||||||||| |||||||||||||    
T  210885 aaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 205357 - 205448
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| |||||||||| | ||||||| || |||||||  |||||| |  || ||||||||||||||||  ||||||||||||||    
T  205357 aggtttaattacacttttgatccttgtattttgaccagctcacgactatggtccttcctctttcaaatcgaacaaatttgtccctaaactat 205448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 204927 - 205018
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||| |||| | ||||||| || |||||||  |||||| |  || ||||||||| ||||||| ||||||||||||||    
T  204927 aggtttaattacacttttggtccttgtattttgaccagctcacgactatggtccttcctctttcaaatcaaacaaaattgtccctaaactat 205018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 205046 - 205115
Alignment:
Q  276 tttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagaccta 345  Q
    |||||| ||||||||||||||||| ||||||||||| ||| |||  ||||||| |  | |||||||||||    
T  205046 tttttgcagttttagtcctacctcctattttcaactctagaaacacagagaaatggaagttttagaccta 205115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 205475 - 205544
Alignment:
Q  276 tttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagaccta 345  Q
    |||||||||||||||||| ||||| ||||||||||| ||| | |  ||||||| | || |||||||||||    
T  205475 tttttgtagttttagtccaacctcctattttcaactctagaatcacagagaaatggcagttttagaccta 205544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 15641 - 15514
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||| ||||||| | ||||||||||||||| ||||||||||||||| || || ||||||||||||||||||||||||||||||   |||||||||||    
T  15641 ttaattagatttttggttctcgcattttgatcagctcacgaaaatggtcctgactctttcaaatcgaacaaaactgtccctaaactatcatgtttttgta 15542  T
Q  284 gttttagtcctacctcttattttcaact 311  Q
    ||||||||| |||||| |||||||||||    
T  15541 gttttagtcatacctcctattttcaact 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 356
Target Start/End: Original strand, 15110 - 15288
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtt 277  Q
    ||||| ||||||| | ||||| || ||||||||||| || ||| |||||||| |  || || |||||||||||||||||    |||||||||||   |||    
T  15110 aaaggcttaattatacttttggtcatcgcattttgaccagctcgcgaaaatgattctgcctctttcaaatcgaacaaaaacaaccctaaactatcatgtt 15209  T
Q  278 tttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||| |||||| ||| |||||| |||||||||||| |  |||| | |||||  ||| ||||||||||| ||| ||||||    
T  15210 tttgcagtttttgtcttacctcctattttcaacttcataaacgcacagaaataacaattttagacctatcccttatgct 15288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 187 - 350
Target Start/End: Complemental strand, 17088682 - 17088516
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||| |||||||| || |||||||||||||||||| || ||||||||| |||||||| |||||||||||||    |||||| |    
T  17088682 ttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatattttttgca 17088583  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccc 350  Q
    |||||||| ||||||| ||||||||| | ||| |||| ||||||| |||| ||||||||||||||||    
T  17088582 gttttagttctacctcctattttcaaatctagaaacgcagagaaatgacagttttagacctaccccc 17088516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 183 - 356
Target Start/End: Original strand, 39485064 - 39485240
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttt 279  Q
    ||||||||||||| ||||| ||||||||||||||  | ||||||||||||||| |  || |||||||||||||||||  |||||||||||||    ||||    
T  39485064 aggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttt 39485163  T
Q  280 tgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    || ||||||||||||| ||| |||||||||||| || |||  ||||| | |||| ||||||||||||||| ||||||    
T  39485164 tgcagttttagtcctatctcctattttcaacttcagaaacacagagagatgacagttttagacctaccccatatgct 39485240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 183 - 328
Target Start/End: Complemental strand, 45048682 - 45048534
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gttt 278  Q
    ||||||||||||| ||||| |||||||||||||| ||  ||||||||||||||||  || |||| ||||||||||||| || ||||||||||     |||    
T  45048682 aggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgt-cctaaactatcatgtttt 45048584  T
Q  279 ttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaa 328  Q
    ||| ||||||||||||||||| |||||||||||  || |||| |||||||    
T  45048583 ttgcagttttagtcctacctcctattttcaactccagaaacgcagagaaa 45048534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 356
Target Start/End: Complemental strand, 9833685 - 9833522
Alignment:
Q  197 ttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgtagttttagtc 292  Q
    |||||||||| | | ||||| |||||||||||||| |||||| || |||||||||||||||||  ||||||||| |||     |||||| ||||||||||    
T  9833685 ttttgatccttgtactttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttttgcagttttagtc 9833586  T
Q  293 ctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||| | |||||||||||  || |||| | |||||  |||||||||| |||||| ||||||||    
T  9833585 ctaccccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 17641919 - 17641825
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||||  || ||| |||||||||||||  |||||||||||||    
T  17641919 aaaagatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactat 17641825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 50926784 - 50926656
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||||| ||||| || ||||||||||| || |||||||||||||||  |||| |||||||||||||||||| |||||||||||   || |||||| |    
T  50926784 ttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcatttttttgca 50926685  T
Q  284 gttttagtcc-tacctcttattttcaact 311  Q
    |||||||||| |||| | |||||||||||    
T  50926684 gttttagtccttaccccctattttcaact 50926656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 1837508 - 1837595
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||| |||||||||||||||||||||| || |||| ||| ||| ||||||||||||| ||||||||||||||    
T  1837508 ttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactat 1837595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 188 - 273
Target Start/End: Original strand, 25274760 - 25274845
Alignment:
Q  188 taattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta 273  Q
    ||||| || ||||| |||||||||||||| || |||||||||||||||||| || |||||||||||||||||| || |||||||||    
T  25274760 taattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaacta 25274845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 17088144 - 17088326
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-------- 273  Q
    |||| ||||||||| | ||| || ||||||||||| || ||||||||||||||  || || |||||||||||||||||| || |||||||||            
T  17088144 aaggcttaattacactgttggtcatcgcattttgaccagctcacgaaaatggttttgcctctttcaaatcgaacaaaaccgt-cctaaactatcatgttt 17088242  T
Q  274 -tgtttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
     | |||||| | ||||||||||||||| |||||||||||| || || | ||||||| | || ||||||||||||| ||||||||    
T  17088243 ttttttttgcaattttagtcctacctcctattttcaacttcagaaatgcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 23527073 - 23526986
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| | ||||||||||| ||||||||||| |||| ||||||||||||| || ||| |||||||||||||| ||| |||||||||    
T  23527073 ttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactat 23526986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 30787341 - 30787254
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||||||  ||||| ||||||||||||||||||||||| ||| ||| |||||||||||||  |||| ||||||||    
T  30787341 ttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactat 30787254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 44802714 - 44802586
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||||| |||| ||||||||| || ||||||||| |||||||| || |||||||  ||||||||  |||||||||||||     ||||||     
T  44802714 ttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttttgc 44802615  T
Q  283 agttttagtcctacctcttattttcaact 311  Q
    ||||||||| ||||||| |||||||||||    
T  44802614 agttttagttctacctcctattttcaact 44802586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 186 - 356
Target Start/End: Original strand, 45048157 - 45048330
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt---ttttgt 282  Q
    |||||||||| ||||| |||| ||||||||| ||||| |||||||||||  |  || ||| |||| ||||||||  |||| |||||||| |   |||||     
T  45048157 tttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgc 45048256  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||||||| |||||||||||  || |||| | |||||  ||| |||||||| ||||| |||||||    
T  45048257 agttttagtcctacctcatattttcaactccagaaacgcatagaaataacagttttagacttaccctctatgct 45048330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 50304442 - 50304529
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||||  || ||| |||||||||||||  ||| |||||||||    
T  50304442 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactat 50304529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 16298685 - 16298796
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    |||||||||||||||  ||| ||||||||| |||||||||||| |||||||  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  16298685 ttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 16298784  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  16298785 gttttagtccta 16298796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 10279090 - 10278982
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgtagtt 286  Q
    ||||||||| ||||||||||  | |||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| |||||||| | |||  ||||    
T  10279090 ttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttcagtt 10278991  T
Q  287 ttagtccta 295  Q
    |||||||||    
T  10278990 ttagtccta 10278982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 309
Target Start/End: Original strand, 29438927 - 29439060
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgt 276  Q
    ||||| ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  ||||||||||||    | |    
T  29438927 aaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactaaatgttt 29439026  T
Q  277 ttttgtagttttagtcctacctct-tattttcaa 309  Q
    ||||| ||||||||||||| |||| |||||||||    
T  29439027 ttttgcagttttagtcctatctctctattttcaa 29439060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 2867914 - 2868001
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| || ||||||||||| ||||||||||||||| |||| ||| ||| ||||||||||||| ||||  ||||||||    
T  2867914 ttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactat 2868001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 8230188 - 8230097
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||||||||| | |||||||||||| | | ||||||||||||| ||  || ||| |||||||||||||  |||||||||||||    
T  8230188 aggtttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactat 8230097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 21938560 - 21938677
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtt 277  Q
    ||||||||||||||| ||||| || |  |||||||||||||||||||||||| || | ||| ||| |||||||||||||  |||| ||||||||    ||    
T  21938560 aaaggtttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatatgttt 21938659  T
Q  278 tttgtagttttagtccta 295  Q
    |||| |||||||||||||    
T  21938660 tttgcagttttagtccta 21938677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 50419389 - 50419464
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaa 258  Q
    |||||||||| || ||||| |||||||||||  | |||||||| ||||||||||||||| ||||||||||||||||    
T  50419389 aggtttaattgcacttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaa 50419464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 50926233 - 50926363
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-----tgtttttg 281  Q
    ||||||||| ||||| ||||| |||||||| || |||||||||||  ||||  || |||||||||||||||||  ||||||||||||     | ||||||    
T  50926233 ttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttg 50926332  T
Q  282 tagttttagtcc-tacctcttattttcaact 311  Q
     ||||||||||| |||||| |||||||||||    
T  50926333 cagttttagtccttacctcctattttcaact 50926363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 29021408 - 29021279
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat-----gtttttg 281  Q
    |||||| || ||||| ||||| |||||||| || |||||||||||| ||||| || |||||||||||||||||  ||||||||| |||      ||||||    
T  29021408 ttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttttttg 29021309  T
Q  282 tagttttagtcctacctcttattttcaact 311  Q
     |||||||||| |||| | |||||||||||    
T  29021308 cagttttagtcttaccccctattttcaact 29021279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 44582602 - 44582530
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| | ||  ||||||||||||||||||||||||||||| ||  |||||||||||||||||    
T  44582602 ttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaa 44582530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 2868251 - 2868164
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||||||| |||||||| |||| ||||||||||||| |  || ||| |||||||||||||  ||||||| |||||    
T  2868251 ttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactat 2868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 39485581 - 39485495
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| | |||||||||||||||||| |||| |||| |||||||||  || || ||||||||| ||||||||||| ||||||||||    
T  39485581 ttaattatacttttgatcctcgcattttaatcagctcatgaaaatggttctgcctctttcaaatcaaacaaaactgt-cctaaactat 39485495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 311
Target Start/End: Complemental strand, 44291861 - 44291726
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----g 275  Q
    ||||||||||||| |||||||  |||| | ||||||| || |||| |||||||||||||||| ||| |||||||| ||||  ||| |  ||||||         
T  44291861 aaaaggtttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgt 44291762  T
Q  276 tttttgtagttttagtcctacctcttattttcaact 311  Q
    |||||| ||||||||||||||| | |||||||||||    
T  44291761 tttttgcagttttagtcctaccccctattttcaact 44291726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 8229640 - 8229685
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatg 232  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8229640 ttaattacacttttgatcctcacattttgatcaactcacgaaaatg 8229685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 23340186 - 23340258
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| |||||||| | ||||||||| |||||||||||| ||||| | ||| ||| |||||||||||||    
T  23340186 ttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaa 23340258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 30786768 - 30786886
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaa-tggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gt 276  Q
    ||||| ||||||||| ||||| | || ||||||||| ||||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    |    
T  30786768 aaaggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtt 30786867  T
Q  277 ttttgtagttttagtccta 295  Q
    ||||| |||||||||||||    
T  30786868 ttttgcagttttagtccta 30786886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 37505065 - 37505182
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt----t 277  Q
    |||| ||||||||| ||||| ||||  |||||||| |||||||||||||||||  | ||| ||| |||||||||||||  |||| |||||||| |    |    
T  37505065 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 37505164  T
Q  278 tttgtagttttagtccta 295  Q
    |||| |||||||||||||    
T  37505165 tttgcagttttagtccta 37505182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 10278551 - 10278663
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt----ttttgt 282  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| || || |  || ||| |||||||||||||  ||||||||||||| |    |||||     
T  10278551 ttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 10278650  T
Q  283 agttttagtccta 295  Q
    |||||||||||||    
T  10278651 agttttagtccta 10278663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 34555925 - 34555838
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||  ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  34555925 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 34555838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 37421159 - 37421250
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||| || | ||||||||| ||| |||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    
T  37421159 aggtttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactat 37421250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 44291304 - 44291391
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| || ||||| ||||| |||||||| || |||||||||||||| ||| || |||||||| ||||||||  |||| ||||||||    
T  44291304 ttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactat 44291391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 444094 - 443983
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||| | |||||||| | ||||||||| |||||||||||| | |||||  || ||| |||||||||||||  || ||||||||||    |||||| |    
T  444094 ttaattatacttttgatctttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgttttttgca 443995  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  443994 gttttagtccta 443983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 274
Target Start/End: Original strand, 4080026 - 4080111
Alignment:
Q  189 aattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| ||||| |||| |||| |||| |||||||||||| || || |  |||||| |||||||||||||  |||||||||||||    
T  4080026 aattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaactat 4080111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 209 - 274
Target Start/End: Complemental strand, 29439443 - 29439378
Alignment:
Q  209 cattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||||||||||||||| || | ||| ||| |||||||||||||  |||| ||||||||    
T  29439443 cattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat 29439378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 44954769 - 44954658
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||||||||||||| ||||||| ||||||| ||||  || ||| ||||| |||||||   ||| ||||||||    |||||| |    
T  44954769 ttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactatatgttttttgca 44954670  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  44954669 gttttagtccta 44954658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 274
Target Start/End: Complemental strand, 48174263 - 48174178
Alignment:
Q  189 aattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| | |||||  ||| |||||||||| |||||||||| |||  ||||| ||| ||||| |||||||| |||||||||||||    
T  48174263 aattacactattgattttcgtattttgatcagctcacgaaaacggttctgtctcttttaaatcaaacaaaaccgtccctaaactat 48174178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 9992698 - 9992626
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| |||| |||||||||  |||||| |||||||||| | ||| ||| |||||||||||||    
T  9992698 ttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaa 9992626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 259
Target Start/End: Original strand, 23526665 - 23526733
Alignment:
Q  191 ttacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||| ||||| ||||| |||||||| || ||||||||||||||| || || ||| |||||||||||||    
T  23526665 ttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaa 23526733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 36228791 - 36228883
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| |||||| || ||||||||||| |||||| |||| ||||| ||||||||| |  || ||| |||| |||||||||  ||||||||||||    
T  36228791 aaggcttaattgcacttttgatcctcacattttaatcagctcacaaaaatggtcttacctcttttaaattgaacaaaacgatccctaaactat 36228883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 37505610 - 37505483
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttttgtag 284  Q
    ||||||| ||||||| ||||   ||||||| |||||||||||| || |||| ||| ||| ||| | |||||||  |||| |||||  |||||||||| ||    
T  37505610 ttaattatatttttggtccttttattttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgtttttgcag 37505511  T
Q  285 ttttagtcctacct-cttattttcaact 311  Q
    ||||||||||| || | |||||||||||    
T  37505510 ttttagtcctatctccctattttcaact 37505483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 44954229 - 44954301
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||  ||| | |||||||| ||||||||||||||||||||  || ||| ||||| |||||||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaa 44954301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 257
Target Start/End: Complemental strand, 39843564 - 39843497
Alignment:
Q  190 attacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaa 257  Q
    |||||| ||| | ||||||||||| || |||||||||||| ||||| || || |||||||||||||||    
T  39843564 attacactttcggtcctcgcatttagaccaactcacgaaattggtcctgcctttttcaaatcgaacaa 39843497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 9992157 - 9992269
Alignment:
Q  187 ttaattacatttttgatcctcgcatttt-gatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgt 282  Q
    ||||||||| ||||| ||||  |||||| || ||||||||| |||||||| | ||| ||| |||||||||||||  |||| ||||||||    ||||||     
T  9992157 ttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgttttttgc 9992256  T
Q  283 agttttagtccta 295  Q
    |||||||||||||    
T  9992257 agttttagtccta 9992269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 274
Target Start/End: Complemental strand, 50305331 - 50305241
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||| ||||| | ||  |||||| | ||||||| |||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  50305331 ggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 50305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 6224698 - 6224747
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggt 234  Q
    ||||||||||||||||||||||  |||||||| |||||||  ||||||||    
T  6224698 gtttaattacatttttgatcctatcattttgaccaactcataaaaatggt 6224747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 259
Target Start/End: Original strand, 29020906 - 29020955
Alignment:
Q  210 attttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||||||| ||||  ||||||||||||||| ||| |||||||||||||    
T  29020906 attttgatcagctcataaaaatggtcatgtctcttttaaatcgaacaaaa 29020955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 291
Target Start/End: Original strand, 17641397 - 17641475
Alignment:
Q  216 atcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgtagttttagt 291  Q
    ||||| ||||||||||||||||  || ||| ||||||||||||| ||| | ||||||||    ||||||||||||||||    
T  17641397 atcaattcacgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgttttttgtagttttagt 17641475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 267
Target Start/End: Complemental strand, 50419803 - 50419723
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccct 267  Q
    |||||| || ||||| || |||||||| || |||||||||||| ||||| || || ||| |||| ||||||||| ||||||    
T  50419803 ttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtccct 50419723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 32836539 - 32836367
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatg-tttttgta 283  Q
    ||||||||| ||||  |||| ||||||||| || |||||||||||||||||| || |||||||||||||||||| || | |||||  |||| |||||| |    
T  32836539 ttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatgttttttgca 32836440  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||||||  |||||||||||| || |||| |||||||  ||| ||||||||||||||| ||||||    
T  32836439 gttttagtcctaccttctattttcaacttcagaaacgaagagaaataacagttttagacctaccccttatgct 32836367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 180 - 355
Target Start/End: Complemental strand, 35163737 - 35163557
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-----t 274  Q
    |||||| ||||||||| ||||| ||| |||||||||| || ||||||||||||||  || || ||||||||| |||||||  ||||||||||||     |    
T  35163737 aaaaggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactatatgtt 35163638  T
Q  275 gtttttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgc 355  Q
     |||||| ||||||||||||||||| |||||||||||  |  |||  ||||||| |||| |||||| ||||||||||||||    
T  35163637 ttttttgcagttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 309
Target Start/End: Original strand, 35163183 - 35163312
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gttt 278  Q
    ||||||||||||| ||||  |||||||||||||| || ||||| ||||||||| ||||| |||||||||||||||||| || ||||||||||     |||    
T  35163183 aggtttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgt-cctaaactatcatgtttt 35163281  T
Q  279 ttgtagttttagtcctacctcttattttcaa 309  Q
    ||| ||||||||||||||||| |||||||||    
T  35163282 ttgcagttttagtcctacctcctattttcaa 35163312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 295
Target Start/End: Original strand, 5114466 - 5114582
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttt 278  Q
    |||| ||||||||||||||||||||  ||||||||||||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    |||    
T  5114466 aaggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 5114565  T
Q  279 ttgtagttttagtccta 295  Q
    ||| |||||||||||||    
T  5114566 ttgcagttttagtccta 5114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 32836006 - 32836132
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgt 282  Q
    ||||||||||||| |||||||||| ||||||||| || ||||| |||| |||| || || |||||||||||||||||| || ||||||||||  | || |    
T  32836006 aggtttaattacacttttgatccttgcattttgaccagctcacaaaaacggtcctgcctctttcaaatcgaacaaaaccgt-cctaaactatcatgtt-t 32836103  T
Q  283 agttttagtcctacctcttattttcaact 311  Q
    ||||||||| ||||||| |||||||||||    
T  32836104 agttttagttctacctcctattttcaact 32836132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 31242805 - 31242896
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||||||| || || || ||| |||||||||| ||||||||| |||||||    
T  31242805 aggtttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaacataactgtccccaaactat 31242896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 187 - 308
Target Start/End: Original strand, 835397 - 835521
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    |||||| || ||||| ||||| |||||| | || ||||||||||||||| || || ||||||||||||||||||||||||||||||   || |||||| |    
T  835397 ttaattgcacttttggtcctcacatttttagcagctcacgaaaatggtcttgcctctttcaaatcgaacaaaactgtccctaaactatcatttttttgca 835496  T
Q  284 gttttagtcctacctcttattttca 308  Q
    | |||||||||||| | ||||||||    
T  835497 gctttagtcctaccccctattttca 835521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 187 - 308
Target Start/End: Original strand, 33095717 - 33095842
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    |||||| || ||||| |||||||||||| |||| ||| |||||||||||    || |||||||||||||||||| |||||||||||||     ||||||     
T  33095717 ttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttgc 33095816  T
Q  283 agttttagtcctacctcttattttca 308  Q
    ||||||||||||||||| ||||||||    
T  33095817 agttttagtcctacctcctattttca 33095842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 274
Target Start/End: Original strand, 25468848 - 25468939
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||| ||||  |||||||| |||||||||||| ||||||| ||| ||| |||||||||||||  |||||||||||||    
T  25468848 aggtttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactat 25468939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 31073685 - 31073512
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttt-tgta 283  Q
    ||||||||| ||||| |||| ||||||||| || ||||||||| |||||||  || ||| ||||||||||||| |||||||||||  |||||||| || |    
T  31073685 ttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgtgca 31073586  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| || | ||||| |||||  || |||| | ||||| |||| |||||| || ||| ||||||||    
T  31073585 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 25472556 - 25472469
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  25472556 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactat 25472469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 31574275 - 31574181
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| ||||||||| ||||| |||| ||||||||| |||||||||||| | |||||  || ||| |||||||||||||  |||||||||||||    
T  31574275 aaaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat 31574181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 274
Target Start/End: Complemental strand, 24640729 - 24640641
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||| | ||||| ||||  ||||||||||||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  24640729 tttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 24640641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 33096154 - 33096081
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaac 260  Q
    |||||| || ||||| || ||||||||| | || |||| |||||||||||||||| ||||||||||||||||||    
T  33096154 ttaattgcacttttgttcttcgcatttttaccagctcatgaaaatggtcatgtctctttcaaatcgaacaaaac 33096081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 30251235 - 30251126
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgtttttgt 282  Q
    ||||||||| ||||||||||   ||||||| |||||||| ||||| ||||| ||| ||| |||||||||||||  |||| |||||||    | |||||||    
T  30251235 ttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtatttttgt 30251136  T
Q  283 agttttagtc 292  Q
    ||||||||||    
T  30251135 agttttagtc 30251126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 5121012 - 5120901
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| |  || |  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  5121012 ttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 5120913  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  5120912 gttttagtccta 5120901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 260
Target Start/End: Original strand, 22534068 - 22534140
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaac 260  Q
    ||||||||| ||||| ||| || ||||||||||  ||| |||||||||||||||| ||| ||||||||||||||    
T  22534068 ttaattacacttttg-tccccgtattttgatcagttcaagaaaatggtcatgtctcttttaaatcgaacaaaac 22534140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 835768 - 835696
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||| || ||||| |||||||||||| | || || |||||||||||| || || |||||||||||||||||    
T  835768 ttaattgcacttttggtcctcgcatttttagcagcttacgaaaatggtcctgcctctttcaaatcgaacaaaa 835696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 235
Target Start/End: Complemental strand, 22534267 - 22534219
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||| ||||| |||||| ||||||| ||||||||||||||||||    
T  22534267 ttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtc 22534219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 24822851 - 24822927
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaa 258  Q
    |||||||||||||| ||||| | |||| ||||| ||||  |||||||||||||  || || ||||||||||||||||    
T  24822851 aaggtttaattacacttttggttctcggattttaatcagttcacgaaaatggtgctgcctttttcaaatcgaacaaa 24822927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 28636295 - 28636402
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttttgtag 284  Q
    ||||||||||||||| || | | ||||||| |||||||||||| ||||| |   | ||| |||||||||||||  || |||||||  |||||||||| ||    
T  28636295 ttaattacatttttggtcattgtattttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatgtttttgcag 28636394  T
Q  285 ttttagtc 292  Q
    ||||||||    
T  28636395 ttttagtc 28636402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 30250724 - 30250772
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| |||||    
T  30250724 ttaattacaattttggtccttgcattttgaccaactcacgaaattggtc 30250772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 7e-31; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 35579428 - 35579256
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| | ||| || ||||||||| |||||||| || ||||||||||     ||||||     
T  35579428 ttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgt-cctaaactatcatgttttttgc 35579330  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||| |||||| ||||||||||| ||  |||| || ||||  ||| ||||||||||||||||||||||    
T  35579329 agttttagtcatacctcctattttcaactctaaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 9393739 - 9393866
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg----tttttgt 282  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||| ||| || || |||||||||||||||||| |||| ||||||||     ||||||     
T  9393739 ttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttgc 9393837  T
Q  283 agttttagtcctacctcttattttcaact 311  Q
     |||||||||||||||| |||||||||||    
T  9393838 tgttttagtcctacctcctattttcaact 9393866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 39136689 - 39136816
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||||| |||||||||| ||||||||| || ||||||||||||||  || || |||||||||||||||||  |||||||||||   |||||| || |    
T  39136689 ttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactatcatgtttatgca 39136788  T
Q  284 gttttagtcctacctcttattttcaact 311  Q
     ||||||||||| |||| ||||||||||    
T  39136789 cttttagtcctaactctaattttcaact 39136816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 182 - 340
Target Start/End: Complemental strand, 34595320 - 34595158
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgttt 278  Q
    |||| ||||||||| ||||| ||||| |||||||| |||||||||||||||||| ||  | ||| |||||||||||||  |||||||||||   ||||||    
T  34595320 aaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatgttt 34595221  T
Q  279 ttgtagttttagtccta-cctcttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||| ||||||||| ||| || |||||||||||||  || |||| | ||||| |||| ||||||    
T  34595220 ttgcagttttagtgctacccccttattttcaactccagaaacgcacagaaatgacagttttag 34595158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 35578902 - 35579074
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatg----tttttgt 282  Q
    ||||||||| ||||| || | ||||||||| || ||||| ||||||||| || |  |||||||||||||||||| |||  ||||||||     ||||||     
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaaccgtca-taaactatcatgttttttgc 35579000  T
Q  283 agttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||| |||||| || |||||||||||  || |||| ||||||| |||||||||||||||| ||||||||||    
T  35579001 agttttaatcctacatcctattttcaactccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 5333883 - 5333970
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||||||||||||    
T  5333883 ttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactat 5333970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 349
Target Start/End: Complemental strand, 9394272 - 9394108
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| || ||||||||||| || ||||| ||||||||| |  || |||||||||||||||||| |||||||||||||    |||||| |    
T  9394272 ttaattacacttttggtc-tcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatatattttttgca 9394174  T
Q  284 gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctacccc 349  Q
    |||||||||||| ||| ||||| |||||| |  |||  | ||||| |||| |||||||| ||||||    
T  9394173 gttttagtcctatctcctatttccaacttcaaaaacacaaagaaatgacagttttagacttacccc 9394108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 7732491 - 7732619
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||||||||| |||| |||||||||||||||||||||| ||||| |  || ||| |||||||||||||  |||| ||||||||    |||||| |    
T  7732491 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 7732590  T
Q  284 gttttagtcctacct-cttattttcaact 311  Q
    |||||||||||| || | |||||||||||    
T  7732591 gttttagtcctatctccctattttcaact 7732619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 193 - 349
Target Start/End: Complemental strand, 32427555 - 32427397
Alignment:
Q  193 acatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtcc-ctaaac-tatgtttttgtagttttag 290  Q
    ||||||||| || || ||||| ||| | |||||||||||| ||| ||||  |||||||| ||||||| ||||  ||| |  ||| |||||||||||||||    
T  32427555 acatttttggtcatcacatttcgataagctcacgaaaatgatcacgtctccttcaaatcaaacaaaattgtcaactatatatatttttttgtagttttag 32427456  T
Q  291 tcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctacccc 349  Q
    |||| |||| ||||||||||| ||  |||| ||||||| |||| |||||||||||||||    
T  32427455 tccttcctcctattttcaactctaaaaacgcagagaaatgacagttttagacctacccc 32427397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 786779 - 786897
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt---- 276  Q
    ||||| ||||||||| ||||||||||  |||||||| ||||||||||||||||||||  || ||| ||||||||||||| | ||| |||||||| |        
T  786779 aaaggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgttt 786878  T
Q  277 ttttgtagttttagtccta 295  Q
    ||||| |||||||||||||    
T  786879 ttttgcagttttagtccta 786897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 15712368 - 15712479
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    ||||||||    
T  15712368 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttgta 15712467  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  15712468 gttttagtccta 15712479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 304
Target Start/End: Original strand, 45815342 - 45815466
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta-----tgt 276  Q
    |||| ||||||||| ||||| |||| ||||||||| || ||   ||||||||||||| || |||||||||||||||||| ||||||||||||     | |    
T  45815342 aaggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt 45815438  T
Q  277 ttttgtagttttagtcctacctcttatt 304  Q
    ||||| |||||||||| |||||||||||    
T  45815439 ttttgcagttttagtcttacctcttatt 45815466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 183 - 274
Target Start/End: Complemental strand, 787333 - 787242
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||| ||||| | |||| ||||||| |||||||||||||||||| |  || ||| |||||||||||||  |||||||||||||    
T  787333 aggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 787242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 309
Target Start/End: Original strand, 4477705 - 4477830
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| | ||||||||  |||||||| ||| ||||||||||||||  | || ||| |||| ||| ||||  |||||||||||||   ||||||| |    
T  4477705 ttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatgtttttgca 4477804  T
Q  284 gttttagtcctacctcttattttcaa 309  Q
    |||||||||||||||| |||||||||    
T  4477805 gttttagtcctacctcctattttcaa 4477830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 9181535 - 9181708
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta---tgtttttgta 283  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| |||||||   | |||||| |    
T  9181535 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatattttttttgca 9181634  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| || | ||||| |||||  || |||| | ||||| |||| |||||| || ||| ||||||||    
T  9181635 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 311
Target Start/End: Original strand, 49064031 - 49064164
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtt 277  Q
    ||||| ||||||||| ||||| |||||| ||||||| || ||||||||||||||  || || |||||||| ||||||||   ||| ||||||   |||||    
T  49064031 aaaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcatgtt 49064130  T
Q  278 tttgtagttttagtcctacctcttattttcaact 311  Q
    |||| | ||||||||||| ||| |||||||||||    
T  49064131 tttgcacttttagtcctaactcctattttcaact 49064164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 295
Target Start/End: Complemental strand, 25637742 - 25637630
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgt 282  Q
    |||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    ||||||     
T  25637742 tttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 25637643  T
Q  283 agttttagtccta 295  Q
    |||||||||||||    
T  25637642 agttttagtccta 25637630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 39137081 - 39136965
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgttt 278  Q
    |||| ||||||||| |||||||||||| ||||||| |  ||||||||||||||| || || ||| |||||||||||||  |||| ||||||   || |||    
T  39137081 aaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaactctcatattt 39136982  T
Q  279 ttgtagttttagtccta 295  Q
    ||||| |||||||||||    
T  39136981 ttgtacttttagtccta 39136965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 186 - 259
Target Start/End: Original strand, 5745641 - 5745714
Alignment:
Q  186 tttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||||||||| ||||| ||||  |||||||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  5745641 tttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaa 5745714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 2758246 - 2758154
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| ||||||||||||| ||||||||||||||||||  |  || ||| |||||||||||||  |||| ||||||||    
T  2758246 aaggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat 2758154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 9181960 - 9181868
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| |||||||||| ||||||||| ||| |||||||| || ||||  || ||| |||||||||||||  |||||||||||||    
T  9181960 aaggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat 9181868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 16917716 - 16917788
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||||| ||| ||| |||||||||||||    
T  16917716 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaa 16917788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 187 - 308
Target Start/End: Original strand, 33880623 - 33880748
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat----gtttttgt 282  Q
    |||||| |||||||| |||||| ||||||| || ||||| ||||| ||  || || |||||||||||||||||| ||||||||| |||     ||||||     
T  33880623 ttaattgcatttttggtcctcgtattttgaccagctcacaaaaattgttctgcctctttcaaatcgaacaaaaccgtccctaaattatcatattttttgc 33880722  T
Q  283 agttttagtcctacctcttattttca 308  Q
    | ||||||||||||| ||||||||||    
T  33880723 acttttagtcctaccccttattttca 33880748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 5334362 - 5334275
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||| ||| |  || ||| |||||||||||||  |||||||||||||    
T  5334362 ttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactat 5334275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 24929851 - 24929764
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| ||||| |  || ||| ||||| |||||||  |||||||||||||    
T  24929851 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactat 24929764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 26047960 - 26048047
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||| ||  ||||| || |||||||||||||||||||| ||| ||| |||||||| |||| ||||| ||||||||    
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactat 26048047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 7733037 - 7732943
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| ||||||||| ||||| ||||  |||||||| ||||||||||||||| || | ||| ||| |||||||||||||  |||| ||||||||    
T  7733037 aaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactat 7732943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 28688043 - 28687955
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||||| | |||| ||||||||| |||||||||||| || ||||  || ||| |||||||||||||  |||||||||||||    
T  28688043 gtttaattacattttgg-tccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactat 28687955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 26048489 - 26048382
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatgtttttgtag 284  Q
    ||||||||| ||||| |||| || |||||| |||||||||||| ||||| |  || ||| ||||| ||||||| ||||| |||||  |||||||||| ||    
T  26048489 ttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgtttttgcag 26048390  T
Q  285 ttttagtc 292  Q
    ||||||||    
T  26048389 ttttagtc 26048382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 27245206 - 27245380
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaac--tatg--tttttgt 282  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  ||||| ||||  ||||  ||||||     
T  27245206 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttttgc 27245305  T
Q  283 agttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||| || ||||||| |||||  || |||| | ||||| || | |||||| || ||| ||||||||    
T  27245306 agttttagtcctatctccttatttccaactccagaaacgcacagaaatgatagttttagtccaaccacctatgct 27245380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 49064263 - 49064191
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||| | ||||||||||| |||||||  ||  ||||||||||||||||| || |||||||||||||||||    
T  49064263 ttaattatacttttgatcctcacattttggccagttcacgaaaatggtcatgactctttcaaatcgaacaaaa 49064191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 25637200 - 25637312
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgtttttgt 282  Q
    ||||||||| ||||| |||| |||| |||| ||||||| |||| ||||| |  || ||| |||||||||||||  ||||||||||||    | |||||||    
T  25637200 ttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgt 25637299  T
Q  283 agttttagtccta 295  Q
    |||||||||||||    
T  25637300 agttttagtccta 25637312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 48247590 - 48247673
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||||||| ||||| |||| |||||||||||||||||||||| ||||| |  || ||| ||||| |||||||  |||||||||    
T  48247590 ttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaa 48247673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 48248135 - 48248048
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| |||||||| ||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  48248135 ttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 48248048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 259
Target Start/End: Complemental strand, 27245725 - 27245675
Alignment:
Q  209 cattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||||||||||||||| | ||| ||| |||||||||||||    
T  27245725 cattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaa 27245675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 274
Target Start/End: Original strand, 11971331 - 11971424
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||| ||||||| | ||||| ||||  |||||||| | |||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  11971331 aaaggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 11971424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 295
Target Start/End: Original strand, 16081294 - 16081413
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---g 275  Q
    ||||||| ||||||||| ||||| ||||   ||||||| ||||||| | |||||||| | ||| ||| |||||||||||||  |||| ||||||||        
T  16081294 taaaaggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgt 16081393  T
Q  276 tttttgtagttttagtccta 295  Q
    |||||| |||||||||||||    
T  16081394 tttttgcagttttagtccta 16081413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 26026318 - 26026407
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||| ||||| |||| | ||||||| || ||||||||| |||||||  || ||| |||||||||||||  |||| ||||||||    
T  26026318 gtttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactat 26026407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 311
Target Start/End: Original strand, 34594586 - 34594713
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgta 283  Q
    ||||||||| ||||| ||||||||||||||  |||||||||||||  ||  |  | |||  |||| |||||||   ||||||||||   ||||||||| |    
T  34594586 ttaattacacttttggtcctcgcattttgactaactcacgaaaattatctcgcatcttttcaatcaaacaaaatcatccctaaactatcatgtttttgca 34594685  T
Q  284 gttttagtcctacctcttattttcaact 311  Q
    |||||||||||||| | |||||||||||    
T  34594686 gttttagtcctaccccctattttcaact 34594713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 40669754 - 40669701
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcat 237  Q
    |||||||||||| ||||||||||  |||||||| ||||||||||||||| ||||    
T  40669754 ggtttaattacacttttgatccttccattttgaccaactcacgaaaatgatcat 40669701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 5184427 - 5184479
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||||||||||||| |||| | ||||||| |||||||||||| |||||    
T  5184427 aggtttaattacatttttggtccttggattttgaccaactcacgaaattggtc 5184479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 274
Target Start/End: Complemental strand, 5746188 - 5746097
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| |||| |||||||||  ||||||||||| || || || || ||| |||||||||||||| |||| ||||||||    
T  5746188 aaggcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactat 5746097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 274
Target Start/End: Complemental strand, 35161342 - 35161258
Alignment:
Q  190 attacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| ||||| |||| ||||||||| ||||||||| || ||||| |  || ||| |||||||||||||  |||||||||||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactat 35161258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 39388811 - 39388682
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgtttttgt 282  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| | ||| |  || ||| |||||||||||||  ||| ||||||||    | ||||||     
T  39388811 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttgc 39388712  T
Q  283 agttttagtcctacct-cttattttcaact 311  Q
    ||||||||||||| || | |||||||||||    
T  39388711 agttttagtcctatctccctattttcaact 39388682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 16081847 - 16081731
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gttt 278  Q
    |||| |||||||||  |||| |||| ||||||||| |||||||||||| || || |  || ||| |||||||||||||   ||||||||||||    |||    
T  16081847 aaggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttt 16081748  T
Q  279 ttgtagttttagtccta 295  Q
    ||| |||||||||||||    
T  16081747 ttgcagttttagtccta 16081731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 356
Target Start/End: Complemental strand, 11973947 - 11973772
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta---tgtttttg 281  Q
    ||||||||||||||||| |||| ||||||||| ||||  |||||| ||||  |  || ||| |||| ||||||||  ||||||||| ||    |||||||    
T  11973947 gtttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggtttttg 11973848  T
Q  282 tagttttagtccta-cctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
     ||||||||| ||| | || ||||| |||||| || |||| | ||||| |||| |||||| || ||| ||||||||    
T  11973847 cagttttagttctatcttcctatttccaacttcagaaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 280
Target Start/End: Original strand, 28687596 - 28687689
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgttttt 280  Q
    ||||||||| ||||| || |  |||||||| |||||||||||||||||  | ||| ||  |||||||||||||  |||| |||||||| |||||    
T  28687596 ttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatattttt 28687689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 237
Target Start/End: Original strand, 35160653 - 35160706
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcat 237  Q
    |||||| ||||| ||||| ||||  |||||||| ||||||||||||||||||||    
T  35160653 ggtttatttacacttttggtcctaccattttgaccaactcacgaaaatggtcat 35160706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 354
Target Start/End: Original strand, 28876900 - 28877077
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtt 277  Q
    ||||||||| ||||| ||||| ||||||||||||||||| |||||||||||  |  || || |||||||||||||||||  |||||||||||   |||||    
T  28876900 aaaggtttatttacacttttggtcctcgcattttgatcagctcacgaaaataattctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgtt 28876999  T
Q  278 tttgtagtttt-agtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatg 354  Q
    ||||||||||| | || ||| ||||||||||||||  || |||| ||||||| || |  |||||||||||||||||||    
T  28877000 tttgtagttttaaatcttacttcttattttcaactcaagaaacgcagagaaacgatagctttagacctaccccctatg 28877077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 181 - 356
Target Start/End: Complemental strand, 28877438 - 28877260
Alignment:
Q  181 aaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaa--actatg-tt 277  Q
    ||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| ||  || |||||||| |||||||| |||||||||  |  ||| ||    
T  28877438 aaaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccctaactatcatgttt 28877339  T
Q  278 tttgtagttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||  |||||||||||||||  |||||| ||||  || |||||| | ||| |||| ||||||||||||| ||||||||    
T  28877338 tttgctgttttagtcctaccttctatttttaactccagaaacgtatataaatgacaattttagacctacctcctatgct 28877260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 7910611 - 7910702
Alignment:
Q  179 taaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| ||  || ||| |||||||||||||  |||||||||    
T  7910611 taaaaggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaa 7910702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 274
Target Start/End: Complemental strand, 18050136 - 18050047
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||||||||||| |||| ||||||||| |||||||||||| |||||||  || ||| |||||||||||||  |||||||||||||    
T  18050136 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactat 18050047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 187 - 356
Target Start/End: Original strand, 28254428 - 28254602
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgtttttgt 282  Q
    ||||||||| ||||| ||||  ||||||||||||||||||||||||||| | ||||||| |||| ||||||||  |||| |||||||    | ||||||     
T  28254428 ttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttgc 28254527  T
Q  283 agttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    ||||||||||||| || | ||||| |||||  || |||| | ||||| ||||||||||| || ||| ||||||||    
T  28254528 agttttagtcctatctccctatttccaactccagaaacgcatagaaatgacatttttagtccaaccacctatgct 28254602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 180 - 274
Target Start/End: Complemental strand, 18428312 - 18428218
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||||||||||||| ||||| ||||  |||||||| |||||||||||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  18428312 aaaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 18428218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 7911159 - 7911072
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||||  |  || ||| |||||||||||||  |||||||||||||    
T  7911159 ttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactat 7911072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 355
Target Start/End: Original strand, 18805165 - 18805337
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgtttttgta- 283  Q
    ||||||||||| ||||| |||  |||||||||  | ||||||||||||||  | ||| ||| ||||||||||||||||||||  |||||| | ||| |      
T  18805165 gtttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactatatgttttttc 18805263  T
Q  284 --gttttagtcctacctcttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgc 355  Q
      |||||||||||||||| ||| |||||||  || |||  ||||||| |||| |||||||| ||||||||||||    
T  18805264 ctgttttagtcctacctcctatcttcaactccagaaacacagagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 187 - 356
Target Start/End: Complemental strand, 28254969 - 28254796
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  28254969 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttgca 28254870  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttagacctaccccctatgct 356  Q
    |||||||||||| || | ||||| |||||  || |||| | ||||| |||| |||||| || ||| ||||||||    
T  28254869 gttttagtcctatctccctatttccaactccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 599530 - 599607
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    |||| ||||||||||||||| |||| ||||||||| |||||||||||| |||||||  || ||| |||||||||||||    
T  599530 aaggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaa 599607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 187 - 295
Target Start/End: Original strand, 15255856 - 15255967
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  15255856 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 15255955  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  15255956 gttttagtccta 15255967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 2208717 - 2208804
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||||||  |||||||| |||||||||||||| ||| | ||| ||| |||||||||||||  |||| ||||||||    
T  2208717 ttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactat 2208804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 187 - 311
Target Start/End: Complemental strand, 41260804 - 41260676
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||| | ||||| || | |||||||||||||||||||||| || ||||  || ||| |||||||||||||  |||||||||||||    |||||| |    
T  41260804 ttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 41260705  T
Q  284 gttttagtcctacct-cttattttcaact 311  Q
    |||||||||||| || | |||||||||||    
T  41260704 gttttagtcctatctccctattttcaact 41260676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 274
Target Start/End: Complemental strand, 600051 - 599954
Alignment:
Q  177 agtaaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||| ||| ||||||||| ||||| ||||  |||||||| ||||| |||||||||||||| ||| ||| |||| ||||||||  |||| ||||||||    
T  600051 agtaataggcttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactat 599954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 16578639 - 16578567
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| ||||  ||||||||  |||||||||||||||| || ||| |||||||||||||||||    
T  16578639 ttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaa 16578567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 182 - 274
Target Start/End: Original strand, 41260269 - 41260361
Alignment:
Q  182 aaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||| ||||||||| ||||| ||||  |||||||| ||||||| |||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  41260269 aaggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 41260361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 340
Target Start/End: Original strand, 5730820 - 5730977
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||| ||| | ||| ||| ||||| |||||||  |||| ||||||||    ||||||      
T  5730820 ttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatgttttttgct 5730919  T
Q  284 gttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||||||||||||||| | |||||| ||||  || |||||| ||||| |||| ||||||    
T  5730920 gttttagtcctacctccctatttttaactccagaaacgtacagaaatgacagttttag 5730977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 15256374 - 15256287
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||  |||||||| ||||||| |||||||||| | ||| ||| |||||||||||||  |||| ||||||||    
T  15256374 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 15256287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 16578111 - 16578194
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaa 270  Q
    ||||||||||||||| | || ||||||||| |||||||||||| ||||| |  || ||| |||||||||||||  |||||||||    
T  16578111 ttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaa 16578194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 234
Target Start/End: Complemental strand, 35427355 - 35427308
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggt 234  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  35427355 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggt 35427308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 274
Target Start/End: Original strand, 42035775 - 42035862
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||||||  |  || ||| |||||||||||||  |||| ||||||||    
T  42035775 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactat 42035862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 340
Target Start/End: Complemental strand, 6115654 - 6115496
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaacta----tgtttttgt 282  Q
    ||||||| | ||||| |||| | ||||||| |||||| ||||| ||||| |  || ||| |||||||||||||  ||||||||||||    | |||||||    
T  6115654 ttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgt 6115555  T
Q  283 agttttagtcctacct-cttattttcaactttagtaacgtagagaaaggacatttttag 340  Q
    ||||||||| ||| || |||||||||||||  || |||| | ||||| |||| ||||||    
T  6115554 agttttagttctatctccttattttcaactcaagaaacgcacagaaatgacagttttag 6115496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 10047155 - 10047068
Alignment:
Q  211 ttttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaact---atgtttttgtagttttagtccta 295  Q
    ||||||||||||||||||||| ||| ||| | ||| |||||||||||||  ||| |||||||   ||||||||| ||||||| |||||    
T  10047155 ttttgatcaactcacgaaaatagtcttgtttcttttaaatcgaacaaaatggtctctaaactatcatgtttttgcagttttaatccta 10047068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 18049595 - 18049705
Alignment:
Q  189 aattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgt----ttttgtag 284  Q
    ||||||| ||||| ||||  |||||||| |||||||||||||||||  | ||| ||| |||||||||||||  |||| |||||||| |    ||||| ||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcag 18049694  T
Q  285 ttttagtccta 295  Q
    |||||||||||    
T  18049695 ttttagtccta 18049705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 295
Target Start/End: Complemental strand, 34799626 - 34799515
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    ||||||||| ||||| ||||  |||||||| ||| | |||||| ||||| |  || ||| ||||||||||||| ||||||||||||||    |||||| |    
T  34799626 ttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgttttttgca 34799527  T
Q  284 gttttagtccta 295  Q
    ||||||||||||    
T  34799526 gttttagtccta 34799515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 42036315 - 42036228
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||| | |||| ||| ||||||||||| ||||| ||||||||| || |  || ||| |||||||||||||  |||||||||||||    
T  42036315 ttaattatacttttcatcttcgcattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactat 42036228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 259
Target Start/End: Original strand, 9796729 - 9796801
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| |||| ||||||||| |||||||| ||| ||||| |  || ||| |||||||||||||    
T  9796729 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaa 9796801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 10918125 - 10918177
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||||||||||||  ||||||  |||||||| |||||||||| |||||    
T  10918125 aggtttaattacattttttgtcctcgtgttttgatctactcacgaaattggtc 10918177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 35426841 - 35426893
Alignment:
Q  183 aggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||||||| ||||  ||||  |||||||| ||||||||||||||||||    
T  35426841 aggtttaattacacttttagtcctaccattttgaccaactcacgaaaatggtc 35426893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 280
Target Start/End: Complemental strand, 35694424 - 35694328
Alignment:
Q  184 ggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactatgttttt 280  Q
    |||||||||||| ||||| ||||  ||||||||  ||||||| ||||||||| |   | ||| |||||||||||||  |||| |||||||| |||||    
T  35694424 ggtttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatattttt 35694328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1432 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 608 - 521
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    ||||||||| ||||||||||||||||||||  | ||||||||||||||| || || |||||||||||||||||| ||| |||||||||    
T  608 ttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactat 521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 259
Target Start/End: Complemental strand, 46811 - 46739
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||| ||||| ||||  |||||||| |||||||||||||||||| | | ||||| |||||||||||||    
T  46811 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaa 46739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 274
Target Start/End: Original strand, 46262 - 46356
Alignment:
Q  180 aaaaggtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat 274  Q
    |||||| |||||| || ||||| |||||||||||||| ||||| |||||||||||  |  || ||| |||||||||||||   ||||||||||||    
T  46262 aaaaggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactat 46356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 197 - 297
Target Start/End: Original strand, 159032 - 159137
Alignment:
Q  197 ttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaac--tgtccctaaacta---tgtttttgtagttttagt 291  Q
    |||||||||||||||||| | || |||||||||||| || || || ||||||||||||||||||  | || ||||||||   | |||||| |||||||||    
T  159032 ttttgatcctcgcatttttaccagctcacgaaaatgatcctgcctctttcaaatcgaacaaaaccgtctctctaaactatcgtttttttgcagttttagt 159131  T
Q  292 cctacc 297  Q
    ||||||    
T  159132 cctacc 159137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 259
Target Start/End: Complemental strand, 159390 - 159352
Alignment:
Q  221 ctcacgaaaatggtcatgtctatttcaaatcgaacaaaa 259  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  159390 ctcacgaaaatggtcatgtctctttcaaatcgaacaaaa 159352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 6395 - 6551
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    |||||| || ||||| ||||  |||||||||||||||| |||||||||  | ||| ||| |||||||||||||  |||| |||| |||    |||||| |    
T  6395 ttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgttttttgca 6494  T
Q  284 gttttagtccta-cctcttattttcaactttagtaacgtagagaaaggacattttta 339  Q
    |||||||||||| | || ||||| |||||| || |||| | ||||| |||| |||||    
T  6495 gttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 6551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 339
Target Start/End: Original strand, 6413 - 6569
Alignment:
Q  187 ttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtcatgtctatttcaaatcgaacaaaactgtccctaaactat---gtttttgta 283  Q
    |||||| || ||||| ||||  |||||||||||||||| |||||||||  | ||| ||| |||||||||||||  |||| |||| |||    |||||| |    
T  6413 ttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatatgttttttgca 6512  T
Q  284 gttttagtccta-cctcttattttcaactttagtaacgtagagaaaggacattttta 339  Q
    |||||||||||| | || ||||| |||||| || |||| | ||||| |||| |||||    
T  6513 gttttagtcctatcttcctatttccaacttcagaaacgcacagaaatgacagtttta 6569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 62002 - 61952
Alignment:
Q  185 gtttaattacatttttgatcctcgcattttgatcaactcacgaaaatggtc 235  Q
    ||||||||||| ||||||||||||  ||||| || ||||||||||||||||    
T  62002 gtttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtc 61952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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