View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19707_low_47 (Length: 238)
Name: NF19707_low_47
Description: NF19707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19707_low_47 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 2504192 - 2503969
Alignment:
| Q |
1 |
tatatcattgttagtatttgttcaattccaattctagtatgctaaccaaatcatgcatctaattaaaatttgtttagaaaatttaataataa---gtagc |
97 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
2504192 |
tatatcattgttagtatttgttcaattccaattctagtatgctaaccaaatcatgcatctaattaaaatttgtttagaaaatttaataataataagtagc |
2504093 |
T |
|
| Q |
98 |
ctcatgattggaccatgaaggttgaagaaaaaagagacctcacctgtccatatccattgccacgaataagataaatggaaaagaaagagaaccaaatcaa |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2504092 |
ctcatgattggaccatgaaggttgaagaaaaaagagacctcacctgtccatatccattgccacgaataagataaatggaaaagaaagagaaccaaatcaa |
2503993 |
T |
|
| Q |
198 |
gagtaacacccctaatttcaacca |
221 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
2503992 |
gagtaacacccctaatttcaacca |
2503969 |
T |
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