View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19708_high_4 (Length: 593)

Name: NF19708_high_4
Description: NF19708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19708_high_4
NF19708_high_4
[»] chr6 (30 HSPs)
chr6 (20-593)||(8306114-8306688)
chr6 (317-593)||(18736054-18736331)
chr6 (316-593)||(15119589-15119866)
chr6 (317-593)||(23574448-23574724)
chr6 (316-593)||(29094884-29095163)
chr6 (317-589)||(4409254-4409528)
chr6 (317-593)||(14910660-14910936)
chr6 (323-593)||(18728975-18729246)
chr6 (317-525)||(21508507-21508716)
chr6 (444-593)||(7968491-7968640)
chr6 (317-591)||(3876374-3876649)
chr6 (317-593)||(29482645-29482922)
chr6 (358-593)||(24438470-24438707)
chr6 (386-593)||(12738549-12738757)
chr6 (317-559)||(17756886-17757129)
chr6 (317-593)||(15349496-15349774)
chr6 (452-593)||(19860056-19860197)
chr6 (454-593)||(18014464-18014603)
chr6 (319-407)||(18043519-18043607)
chr6 (346-593)||(18258492-18258740)
chr6 (186-313)||(8301524-8301652)
chr6 (464-583)||(23524128-23524247)
chr6 (458-591)||(15318989-15319122)
chr6 (515-593)||(18043394-18043472)
chr6 (317-420)||(23524248-23524351)
chr6 (317-539)||(15369492-15369716)
chr6 (319-407)||(19857705-19857793)
chr6 (229-314)||(8302714-8302800)
chr6 (317-394)||(27964978-27965055)
chr6 (148-315)||(8300139-8300309)
[»] chr1 (13 HSPs)
chr1 (317-593)||(19967288-19967564)
chr1 (319-593)||(19441982-19442256)
chr1 (317-593)||(8995308-8995583)
chr1 (317-593)||(24973756-24974032)
chr1 (317-593)||(9859021-9859302)
chr1 (319-593)||(38621857-38622132)
chr1 (321-593)||(21817605-21817884)
chr1 (453-593)||(8990767-8990907)
chr1 (317-500)||(21815425-21815609)
chr1 (319-500)||(49472350-49472531)
chr1 (506-593)||(22186045-22186132)
chr1 (317-514)||(33028926-33029124)
chr1 (543-593)||(21815619-21815669)
[»] chr4 (20 HSPs)
chr4 (317-593)||(12885334-12885610)
chr4 (317-593)||(10985583-10985859)
chr4 (317-568)||(16396135-16396387)
chr4 (317-593)||(3268388-3268665)
chr4 (317-593)||(21332413-21332690)
chr4 (317-593)||(12217615-12217885)
chr4 (317-593)||(25239748-25240025)
chr4 (427-593)||(3270600-3270766)
chr4 (317-593)||(9901571-9901847)
chr4 (317-581)||(26780684-26780949)
chr4 (317-584)||(45313209-45313476)
chr4 (316-591)||(13861369-13861645)
chr4 (428-593)||(17282471-17282636)
chr4 (317-593)||(8082098-8082375)
chr4 (317-593)||(28891962-28892243)
chr4 (320-593)||(49402746-49403013)
chr4 (317-397)||(18284484-18284564)
chr4 (454-584)||(15455503-15455633)
chr4 (317-367)||(3270777-3270827)
chr4 (316-396)||(8168007-8168087)
[»] chr8 (18 HSPs)
chr8 (320-593)||(18573889-18574163)
chr8 (318-593)||(32008884-32009159)
chr8 (312-586)||(7999711-7999984)
chr8 (317-593)||(18040357-18040627)
chr8 (312-593)||(41280672-41280955)
chr8 (360-579)||(24033833-24034053)
chr8 (348-593)||(2085642-2085888)
chr8 (317-593)||(7454521-7454812)
chr8 (453-593)||(11709422-11709562)
chr8 (459-593)||(10532801-10532935)
chr8 (317-593)||(25820770-25821047)
chr8 (317-584)||(22609363-22609631)
chr8 (318-593)||(24060612-24060888)
chr8 (341-480)||(17775787-17775926)
chr8 (317-520)||(33273391-33273595)
chr8 (319-407)||(11709621-11709709)
chr8 (337-507)||(10532629-10532800)
chr8 (545-593)||(33273604-33273652)
[»] chr7 (17 HSPs)
chr7 (316-593)||(29164903-29165179)
chr7 (317-593)||(30770057-30770332)
chr7 (315-593)||(20093590-20093868)
chr7 (317-593)||(22705653-22705929)
chr7 (317-593)||(18153182-18153459)
chr7 (319-593)||(21802504-21802779)
chr7 (317-593)||(7595403-7595684)
chr7 (317-593)||(9548828-9549114)
chr7 (330-593)||(47295564-47295827)
chr7 (317-593)||(2249860-2250137)
chr7 (317-593)||(21592744-21593023)
chr7 (317-584)||(38612620-38612888)
chr7 (319-513)||(21801716-21801911)
chr7 (317-581)||(30764849-30765114)
chr7 (444-593)||(18185678-18185827)
chr7 (498-593)||(28794078-28794173)
chr7 (542-593)||(22703950-22704001)
[»] chr2 (13 HSPs)
chr2 (317-593)||(3770314-3770591)
chr2 (317-593)||(23755687-23755964)
chr2 (312-593)||(3105258-3105540)
chr2 (317-593)||(41266065-41266341)
chr2 (316-593)||(26154850-26155128)
chr2 (316-593)||(25133792-25134079)
chr2 (358-593)||(42534032-42534268)
chr2 (316-593)||(27347223-27347500)
chr2 (317-593)||(19092775-19093051)
chr2 (454-593)||(29568369-29568507)
chr2 (453-593)||(23929851-23929991)
chr2 (316-407)||(23932920-23933011)
chr2 (317-367)||(26159096-26159146)
[»] chr5 (18 HSPs)
chr5 (317-593)||(5931244-5931521)
chr5 (315-593)||(28067891-28068169)
chr5 (322-593)||(33622365-33622639)
chr5 (315-593)||(15620059-15620337)
chr5 (317-593)||(23495402-23495678)
chr5 (317-593)||(20899465-20899742)
chr5 (428-593)||(42792535-42792700)
chr5 (327-587)||(41037524-41037785)
chr5 (373-593)||(5590622-5590843)
chr5 (317-593)||(36712519-36712795)
chr5 (317-540)||(8244623-8244846)
chr5 (454-593)||(22922645-22922784)
chr5 (456-593)||(22922050-22922187)
chr5 (341-558)||(19329817-19330035)
chr5 (317-516)||(13537860-13538060)
chr5 (477-593)||(38608321-38608437)
chr5 (317-496)||(24095343-24095523)
chr5 (317-527)||(22510101-22510312)
[»] scaffold0002 (2 HSPs)
scaffold0002 (317-593)||(391513-391791)
scaffold0002 (317-593)||(380815-381092)
[»] scaffold0150 (1 HSPs)
scaffold0150 (317-593)||(29926-30203)
[»] scaffold0170 (1 HSPs)
scaffold0170 (317-593)||(16185-16461)
[»] chr3 (6 HSPs)
chr3 (316-576)||(19790346-19790607)
chr3 (319-593)||(22915106-22915379)
chr3 (453-593)||(16853014-16853154)
chr3 (346-589)||(16914764-16915008)
chr3 (454-568)||(44635826-44635940)
chr3 (317-520)||(13016433-13016636)
[»] scaffold0280 (1 HSPs)
scaffold0280 (317-593)||(909-1186)
[»] scaffold0042 (2 HSPs)
scaffold0042 (317-593)||(68727-69004)
scaffold0042 (447-593)||(74899-75045)
[»] scaffold0026 (1 HSPs)
scaffold0026 (321-593)||(151164-151436)
[»] scaffold0058 (3 HSPs)
scaffold0058 (399-593)||(1662-1857)
scaffold0058 (495-593)||(15419-15517)
scaffold0058 (344-419)||(15528-15603)
[»] scaffold0034 (2 HSPs)
scaffold0034 (428-593)||(47396-47561)
scaffold0034 (319-407)||(56229-56317)
[»] scaffold0083 (1 HSPs)
scaffold0083 (317-593)||(4065-4342)
[»] scaffold0008 (2 HSPs)
scaffold0008 (319-589)||(242731-243002)
scaffold0008 (316-593)||(253367-253645)
[»] scaffold0989 (1 HSPs)
scaffold0989 (373-591)||(1448-1665)
[»] scaffold0192 (1 HSPs)
scaffold0192 (317-593)||(12377-12651)
[»] scaffold0096 (1 HSPs)
scaffold0096 (317-589)||(10741-11014)
[»] scaffold0362 (1 HSPs)
scaffold0362 (317-593)||(7218-7495)
[»] scaffold0084 (1 HSPs)
scaffold0084 (317-593)||(54473-54749)
[»] scaffold0265 (3 HSPs)
scaffold0265 (321-593)||(14925-15204)
scaffold0265 (317-500)||(17200-17384)
scaffold0265 (543-593)||(17140-17190)
[»] scaffold0111 (1 HSPs)
scaffold0111 (317-591)||(2697-2974)
[»] scaffold0013 (1 HSPs)
scaffold0013 (317-593)||(37095-37371)
[»] scaffold0483 (1 HSPs)
scaffold0483 (317-538)||(9243-9461)
[»] scaffold1272 (1 HSPs)
scaffold1272 (317-421)||(1970-2074)
[»] scaffold0025 (1 HSPs)
scaffold0025 (509-593)||(86424-86508)
[»] scaffold0321 (1 HSPs)
scaffold0321 (317-367)||(18257-18307)
[»] scaffold0011 (1 HSPs)
scaffold0011 (499-593)||(20336-20430)
[»] scaffold0299 (1 HSPs)
scaffold0299 (529-593)||(19204-19268)
[»] scaffold0063 (1 HSPs)
scaffold0063 (433-593)||(36765-36925)


Alignment Details
Target: chr6 (Bit Score: 487; Significance: 0; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 487; E-Value: 0
Query Start/End: Original strand, 20 - 593
Target Start/End: Complemental strand, 8306688 - 8306114
Alignment:
Q  20 agccgccgtaataaaaccgtcgtaattcacctgttattttgtagtgcgtgaagacatgtaaggaacatatttttatcaacattcatgaattttacaccaa 119  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8306688 agccgccgtaataaaaccgtcctaattcacctgttattttgtagtgcgtgaagacatgtaaggaacatatttttatcaacattcatgaattttacaccaa 8306589  T
Q  120 atatggcaagactttgtttattttgttctgatcaaatagactacctgcatagattttggtttcttctattcatttattaagttttagttcttgatataat 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8306588 atatggcaagactttgtttattttgttctgatcaaatagactacctgcatagattttggtttcttctattcatttattgagttttagttcttgatataat 8306489  T
Q  220 acctccacattgattgatctatatactcatttccaccaattt-tacgatgcttggttgtggctgtttaattgaagtaaagaatttgcaaggacatttgtg 318  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8306488 gcctccacattgattgatctatatactcatttccaccaatttctacgatgcttggttgtggctgtttaattgaagtaaagaatttgcaaggacatttgtg 8306389  T
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  8306388 ttctggaccggtcaaaaggacatttggcccatatacttaggcccaatacgatctaaagcccaaacatcacgtttgacaaagttacttgcaacatccccct 8306289  T
Q  419 ttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcc 518  Q
    ||||||| ||| |||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  8306288 ttcagacaaggaggtgcacagagcgaaagagactggttcaaacgagtcacaacgtctctctgtaggttcccgcaataaactctctggcggttacactttc 8306189  T
Q  519 catgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||||| || ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  8306188 catgatttcataactgctagagtcaggtgtgccattacaacggctctgcaaccctccacctctataaatagggga 8306114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 18736331 - 18736054
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||  ||| |||||||||||| ||||||||||||  |||||||||| || |||    
T  18736331 tgttctggaccggccaaaaggatttttggcccatttacttaggcccaataatatccaaagcccaaacaccacgtttggcaaacttacttgcaatataccc 18736232  T
Q  417 ctttcagaccag-ggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||||   | || ||||||||| |||| |  |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||| |||    
T  18736231 ctttcccgcaagaggggtgcacggagcgagcgagattggttcaaacgagccacaacgtctctctacacgttcccgcaataaactctctggcgattagact 18736132  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||  ||||| |||||||||||| |||||||| ||||||||| |||  ||| ||||||||||||||||||||||||    
T  18736131 tcccacaatttcgtaaccgccagagccaggtgtgccattacaacggctcagcagccctccacctctataaatagggga 18736054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 316 - 593
Target Start/End: Original strand, 15119589 - 15119866
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    |||||||||||||||||||||||| || |||||||||| ||||||||||||| ||| | |||||||||| |||||||| ||| |||||||   |||  ||    
T  15119589 gtgttctggaccggccaaaaggacctt-ggcccatttacttaggcccaatacaatccagagcccaaacaccacgtttgacaaagttacttatgacacacc 15119687  T
Q  416 cctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||| || || | ||||||||||||||  |||||||  ||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||    
T  15119688 ccttccacacaaggggggtgcacagagtgaaagagacaggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcggttatac 15119787  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| |||||  |||||||||||| |||||||| |||||||   ||| |||||| ||||||||||||||||||||||    
T  15119788 ttcccacgattttgtaaccgccagagccaggtgtgccattacactggctctgcaactctccacctctataaatagggga 15119866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 23574724 - 23574448
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||||||| ||| |||||||||||| |||||||| ||| ||||||||  | |  |||    
T  23574724 tgttctggaccgcccaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttgacaaagttacttgtgatacaccc 23574625  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    |||||  || |||| |||||| |||| || |||| |||||||||||| |||||||||||||||  | |||| ||||||||||||||||| ||||||||||    
T  23574624 ctttcccacaagggcgtgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctacatgttctcgcaataaactctctggtggttacactt 23574525  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     ||| || ||| |||| ||||||| || ||||| ||||||||| ||| |||| ||||| ||||||||||||||||||    
T  23574524 tccacgacttcgtaacagccagagccaagtgtgccattacaacggctctgcagccctctacctctataaatagggga 23574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 316 - 593
Target Start/End: Original strand, 29094884 - 29095163
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    ||||||||||||| |||||| ||  ||||||||||| | ||||||||||||| ||| |||||||||||| ||||||||||||  ||||| || |||  ||    
T  29094884 gtgttctggaccgaccaaaaagatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacacc 29094983  T
Q  416 cctttcagacca--gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
    |||| ||  | |  |||||||||| || | |||||||  ||||||||||| || |||||||||| |  ||||||||||||||||||| | ||||||||||    
T  29094984 ccttccacgcgagggggggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttaca 29095083  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  29095084 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 29095163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 317 - 589
Target Start/End: Complemental strand, 4409528 - 4409254
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaa-catcacgtttggcaaggttacttgcaacatccc 415  Q
    |||||| || ||||||||||||||||||||||||||| ||||||||||||  ||  |||||||||| || |||||||| ||| ||||||||  |||  ||    
T  4409528 tgttctcgatcggccaaaaggacatttggcccatttacttaggcccaatatcattcaaagcccaaaacaccacgtttgacaaagttacttgtgacacacc 4409429  T
Q  416 cctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||||||  | |||||| ||||| |||| ||||||| |||||||||||| ||||||||||||| || ||||||||||||||||| | || ||||||||||    
T  4409428 cctttcacgcaaggggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctatgcacgttcccgcaataaacgccctagcggttacac 4409329  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatag 589  Q
    ||| || |||||  ||||||||||||  ||||||| ||||  ||| ||| |||| ||||||||||||||||||||    
T  4409328 ttctcacgattttgtaaccgccagagcaaggtgtgccattgtaacggctttgcagccctccacctctataaatag 4409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 14910936 - 14910660
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| ||| ||||||||| |||||| |||||  ||| |||| ||||||| ||| ||||||||  ||| |||| |||  |||    
T  14910936 tgttctggaccggccaaaaggaccttttgcccatttacttaggcacaatagaatccaaagtccaaacaccacatttggcaacattatttgcgacacaccc 14910837  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| |  |   |||||||||| |||| |   |||  ||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  14910836 cttccccaaatgggggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacactt 14910737  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||  ||||| |||| |||||||  | ||||| ||||||||| ||| |||| ||||||||||||||| ||||||||    
T  14910736 cccacaatttcgtaactgccagagcgatgtgtgccattacaacggctttgcagccctccacctctatatatagggga 14910660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 323 - 593
Target Start/End: Complemental strand, 18729246 - 18728975
Alignment:
Q  323 ggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttca 422  Q
    |||| |||||||||||  ||||||||||||| ||||||| ||||| ||| ||| |||||||| |||||||| |||  ||||||| ||||  || |||||     
T  18729246 ggacaggccaaaaggatctttggcccatttacttaggcctaatactatccaaaacccaaacaccacgtttgacaaacttacttgtaacacaccgctttcc 18729147  T
Q  423 gaccagg-gggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccat 521  Q
      | ||| |||||||| |||| || ||||  |||||||| ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||     
T  18729146 cgcaaggagggtgcacggagcgaacgagaccggttcaaaggagccacaacgtctctctgcacgtttccgcaataaactctatggcggttacacttcccac 18729047  T
Q  522 gatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||  || ||||||||| |||||||  ||||||||   || |||| ||||||||||||||||||||||||    
T  18729046 gattttgtacccgccagagccaggtgttccattacaatgtctctgcagccctccacctctataaatagggga 18728975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 317 - 525
Target Start/End: Original strand, 21508507 - 21508716
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||| |||||||| |||| ||||||||||||| ||||||||||||| ||| ||||| |||||| |||||||| ||| |||||||||||||  |||    
T  21508507 tgttctggatcggccaaagggacctttggcccatttacttaggcccaatacaatccaaagctcaaacaccacgtttgacaaagttacttgcaacacaccc 21508606  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | |||||| ||||| |||| ||||||| |||||||| ||| ||||| |||||||||| ||||||| |||||||||||| |||||||||||||    
T  21508607 cttccatgcaaggggggtgcacggagcgaaagagactggttcaatcgaaccacagcgtctctctgcacgttcctgcaataaactctatggcggttacact 21508706  T
Q  516 tcccatgatt 525  Q
    ||||| ||||    
T  21508707 tcccacgatt 21508716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 444 - 593
Target Start/End: Original strand, 7968491 - 7968640
Alignment:
Q  444 aaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtca 543  Q
    ||||||| |||||||||||| |||||||||||||||| |||||||| |||||||| | ||||||||||||||| |||  ||||| |||||||||||||||    
T  7968491 aaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaaccccctggcggttacactttccacaatttcgtaaccgccagagtca 7968590  T
Q  544 ggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| ||||||||||||| |||| ||||||||||||||| ||||||||    
T  7968591 ggtgtgccattacaacagctctgcagccctccacctctatatatagggga 7968640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 317 - 591
Target Start/End: Complemental strand, 3876649 - 3876374
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| || || |||||||||||||||||| ||  ||  |||||||||| |||||||||||||  |||||||  |||| |||    
T  3876649 tgttctggaccggccaaaaggactttaggtccatttatttaggcccaacacagtcccaagcccaaacttcacgtttggcaaacttacttgtgacataccc 3876550  T
Q  417 ctt-tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || |   ||||||||||| ||||||   |||  |||||||| |||| ||||||||||| || |  |||||||||||| ||||||| || |||||||    
T  3876549 cttctccgcgaagggggtgcacggagcaagcaagatcggttcaaatgagctacaacgtctctttgcatattcccgcaataatctctctgacgattacact 3876450  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaataggg 591  Q
    ||| | |||||| ||||||||||| | ||||||||| | ||||| ||| |||| ||||||||||||||| ||||||    
T  3876449 tcctacgatttcgtaaccgccagacttaggtgtgtcttcacaacggctctgcagccctccacctctatatataggg 3876374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 29482922 - 29482645
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||  |||||||||||  ||||||||||||| | |||||||| || ||| |||||||||||  ||||||||||||  |||||||| |||  |||    
T  29482922 tgttctggaaaggccaaaaggatctttggcccatttactcaggcccaacacaatccaaagcccaaacgccacgtttggcaacattacttgcgacacaccc 29482823  T
Q  417 cttt-cagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||| |  || | | | ||||| |||| |  ||||  |||||||||||||||||||||||||||| | ||||||||||||||||||||  | |||| |||    
T  29482822 cttttcccacaaagtgctgcacggagcgagcgagaccggttcaaacgagccacaacgtctctctgcatgttcccgcaataaactctctcacagttatact 29482723  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||||||| |||  |||||||| |||||||||  || | || ||||||||||||||||||||||||    
T  29482722 tcccacgatttcgtaaccgctagaaccaggtgtgccattacaacgactctacagccctccacctctataaatagggga 29482645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 358 - 593
Target Start/End: Original strand, 24438470 - 24438707
Alignment:
Q  358 ggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccagggggtg--cacagagcaaaagagaatggt 455  Q
    |||||||||| ||| ||||  |||||| ||| |||||| | |||||||||||||  |||||| ||  | ||||||||  ||| | |  ||||||| ||||    
T  24438470 ggcccaatacaatccaaagttcaaacaccacatttggctatgttacttgcaacacaccccttccacgcaagggggtgtgcacggggagaaagagattggt 24438569  T
Q  456 tcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcatta 555  Q
    |||||||| ||||| ||||||| || ||||||| ||||| |||||| |||||||||||||||||| |||||| ||||||| |||| ||||||||||||||    
T  24438570 tcaaacgaaccacatcgtctctttgcacgttcctgcaatcaactctatggcggttacacttcccacgatttcgtaaccgcaagagccaggtgtgtcatta 24438669  T
Q  556 caacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||  || ||||| |||| ||||||||||||||||||    
T  24438670 caacgactctgcaatcctctacctctataaatagggga 24438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 386 - 593
Target Start/End: Complemental strand, 12738757 - 12738549
Alignment:
Q  386 cacgtttggcaaggttacttgcaacatccccctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacg 484  Q
    |||||||||||| ||||| ||| |||  ||||||||  || |||||| || || |||| ||  ||| | |||||||||| |||||||||||||||| |||    
T  12738757 cacgtttggcaaagttacctgcgacacacccctttcccacaaggggggtgtacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacg 12738658  T
Q  485 ttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctata 584  Q
    ||||||||||||||||||| | |||||||||||||| |||||| ||| || || || ||| |||| ||||||||| ||| ||||||||||||||||||||    
T  12738657 ttcccgcaataaactctctagaggttacacttcccacgatttcgtaatcgtcatagccagatgtgccattacaacggctctgcaaccctccacctctata 12738558  T
Q  585 aatagggga 593  Q
    |||||||||    
T  12738557 aatagggga 12738549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 317 - 559
Target Start/End: Original strand, 17756886 - 17757129
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||| ||||||||||||||||  |||| | |||||| ||||||| ||||| ||| |||||||||||| ||||||||||||  ||||| || |||  |||    
T  17756886 tgttcgggaccggccaaaaggatctttgacacatttacttaggcctaatacaatcgaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 17756985  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | | |||||||||| || | ||| ||| |||||||||||| || |||||||||| |  |||||||| |||||||||| | ||||||||||||    
T  17756986 cttccacgcgaggggggtgcacggaacgaaaaagattggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcacaggcggttacact 17757085  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaac 559  Q
    ||||| |||||  |||||| |||||| ||||||| |||||||||    
T  17757086 tcccacgattttgtaaccgtcagagtaaggtgtgccattacaac 17757129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 15349496 - 15349774
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||  || ||||| |||| |||||||| |||| ||| ||||  |||||| || |||||||||  |||||||||||| | ||    
T  15349496 tgttctggaccggtcaaaaggatcttaggcccgtttacttaggcccgatacaatccaaagatcaaacaccatgtttggcaatattacttgcaaca-cacc 15349594  T
Q  417 ctttcagacc--agggggtgcacagagcaaaagagaatggttcaaa-cgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
    ||| ||   |  |||||||||||||||||    |||  |||||||| ||| ||||||| ||||| || |||||||| |||||| |||||| |||||||||    
T  15349595 cttccatcgcggagggggtgcacagagcatgcaagaccggttcaaaacgaaccacaacatctctttgcacgttcccacaataatctctctcgcggttaca 15349694  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| |||||| |||||||||||  ||||||||  || ||||| ||| |||| ||||||||||||||| ||||||||    
T  15349695 cttcccacgatttcgtaaccgccagacccaggtgtgctatcacaacggctctgcagccctccacctctatatatagggga 15349774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 452 - 593
Target Start/End: Original strand, 19860056 - 19860197
Alignment:
Q  452 tggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtc 551  Q
    |||||||||||| || |||||||||||   | |||||| |||||| |||||||| |||||||||||||| |||||| |||||||||||| |||||||  |    
T  19860056 tggttcaaacgaaccgcaacgtctctcaacatgttcccacaataatctctctggtggttacacttcccacgatttcgtaaccgccagagccaggtgtccc 19860155  T
Q  552 attacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||| |||  ||| ||||||||||||||||||||||||    
T  19860156 attacaacggctccgcagccctccacctctataaatagggga 19860197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 454 - 593
Target Start/End: Original strand, 18014464 - 18014603
Alignment:
Q  454 gttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcat 553  Q
    |||||||||| |||||| || |  ||||||||||||||||||| |||||||| ||||| |||||||| |||||| ||||||||||||  ||||||| |||    
T  18014464 gttcaaacgaaccacaatgtttgactgtacgttcccgcaataatctctctggtggttagacttcccacgatttcgtaaccgccagagctaggtgtgccat 18014563  T
Q  554 tacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| ||| |||| |||||||||||||||  |||||||    
T  18014564 tacaacggctctgcagccctccacctctatatgtagggga 18014603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 18043607 - 18043519
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgc 407  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||  ||||||||||||||||||||||||| |||||||||    
T  18043607 ttctggaccggccaaaaggacctttggcccatttacttaggcccaataccattcaaagcccaaacatcacgtttggcaaagttacttgc 18043519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 346 - 593
Target Start/End: Original strand, 18258492 - 18258740
Alignment:
Q  346 cccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagacca-gggggtgcacagagcaa 444  Q
    |||||||| ||||||||||||| ||| |||||||||||| || |||| ||||  ||||||||| ||| ||| ||    || | ||||||||||  ||| |    
T  18258492 cccatttacttaggcccaatacaatccaaagcccaaacaccatgttttgcaaacttacttgcagcataccctttctccacaaagggggtgcacgaagcga 18258591  T
Q  445 aagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcag 544  Q
      ||||  |||||||| || |||||||||||||| | || ||||||||||||||||| | || |||||||||||||  ||||| |||||  ||||| |||    
T  18258592 gtgagaccggttcaaaggaaccacaacgtctctccgcacattcccgcaataaactctttagcagttacacttcccacaatttcgtaaccatcagagccag 18258691  T
Q  545 gtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| || |||||| ||| | || ||||| ||||||||||||||||||    
T  18258692 gtgtgccactacaacggctctacagccctctacctctataaatagggga 18258740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 186 - 313
Target Start/End: Complemental strand, 8301652 - 8301524
Alignment:
Q  186 tattcatttattaagttttagttcttgatataatacctccacattgattgatctatatactcatttccaccaa-ttttacgatgcttggttgtggctgtt 284  Q
    |||||||||||| ||||||||| ||||||||| | |   |||||||||||||||||||||||||||||||||| ||  | |||  || |||| |||| ||    
T  8301652 tattcatttattgagttttagtacttgatatagttcactcacattgattgatctatatactcatttccaccaagttggatgatattttgttgaggctttt 8301553  T
Q  285 taattgaagtaaagaatttgcaaggacat 313  Q
    |||||||||||||||||||||||||||||    
T  8301552 taattgaagtaaagaatttgcaaggacat 8301524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 464 - 583
Target Start/End: Complemental strand, 23524247 - 23524128
Alignment:
Q  464 gccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagct 563  Q
    |||||||| |||||||| |||||||||||||||||||| ||  |||||||||| ||| |||||| |||||||||||| |||||||| ||||||||  |||    
T  23524247 gccacaacttctctctgcacgttcccgcaataaactctttgatggttacactttccacgatttcttaaccgccagagccaggtgtgccattacaatggct 23524148  T
Q  564 atgcaaccctccacctctat 583  Q
     |||| |||||||| |||||    
T  23524147 ctgcagccctccacgtctat 23524128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 591
Target Start/End: Original strand, 15318989 - 15319122
Alignment:
Q  458 aaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattaca 557  Q
    |||||| ||||||| ||||| || ||||||| ||||||| |||||| |||||||||||||||| |||||| |||||||||||   ||||||  ||| |||    
T  15318989 aaacgaaccacaacttctctttgcacgttcctgcaataatctctctagcggttacacttcccacgatttcgtaaccgccagacctaggtgtaccatcaca 15319088  T
Q  558 acagctatgcaaccctccacctctataaataggg 591  Q
    ||  || |||| ||||||||||||||| ||||||    
T  15319089 acgactctgcagccctccacctctatatataggg 15319122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 515 - 593
Target Start/End: Complemental strand, 18043472 - 18043394
Alignment:
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||||||| || |||||||||||| | ||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  18043472 ttcccatgatttcgtacccgccagagtcatgcgtgtcattacaacggctttgcagccctccacctctataaatagggga 18043394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 317 - 420
Target Start/End: Complemental strand, 23524351 - 23524248
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||||||||| |||| ||||||||||||| |||||  |||||| | | |||||||||||| ||||||| |||| ||||||||| |||  |||    
T  23524351 tgttctggaccggccaaagggacctttggcccatttacttaggtacaatacaacccaaagcccaaacaccacgttttgcaaagttacttgcgacacaccc 23524252  T
Q  417 cttt 420  Q
    ||||    
T  23524251 cttt 23524248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 317 - 539
Target Start/End: Original strand, 15369492 - 15369716
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  || ||| |||||| ||| ||||||||  ||| ||||| |||||| ||||||||||||  || |||||||||  |||    
T  15369492 tgttctggaccggccaaaaggatcttaggcgcatttacttaagcccaatataatccaaagctcaaacaccacgtttggcaatattccttgcaacacaccc 15369591  T
Q  417 ct--ttcagaccagggggtgcacagagcaaaagagaatggttcaaa-cgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
     |  ||| |   ||| ||||||  ||||| |  |||  |||||||| ||| ||||||| ||||| || ||||||||||||||| || |||||||||||||    
T  15369592 ttccttc-gcgaaggcggtgcaaggagcatacaagaccggttcaaaacgaaccacaacttctctttgcacgttcccgcaataatctgtctggcggttaca 15369690  T
Q  514 cttcccatgatttcataaccgccaga 539  Q
    ||||| |  ||||| |||||||||||    
T  15369691 cttcctacaatttcgtaaccgccaga 15369716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 407
Target Start/End: Original strand, 19857705 - 19857793
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgc 407  Q
    |||||||||| |||||||||| |||||| |||||| |||||| |||||| ||| ||||| |||||| |||||||||||| |||| ||||    
T  19857705 ttctggaccgaccaaaaggacctttggcgcatttacttaggctcaatacaatccaaagctcaaacaccacgtttggcaaagttagttgc 19857793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 229 - 314
Target Start/End: Original strand, 8302714 - 8302800
Alignment:
Q  229 ttgattgatctatatactcatttccaccaatttt-acgatgcttggttgtggctgtttaattgaagtaaagaatttgcaaggacatt 314  Q
    |||||||||||||||| ||||||| ||||| ||  |||||||||| || ||| |||||||||||||| ||||||||| |||||||||    
T  8302714 ttgattgatctatatattcatttctaccaagttggacgatgcttgcttatggttgtttaattgaagtgaagaatttgaaaggacatt 8302800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 394
Target Start/End: Complemental strand, 27965055 - 27964978
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttgg 394  Q
    |||| |||||| ||||||||||  ||||||||||||| ||||||||||||  ||| |||||||||||| |||||||||    
T  27965055 tgttttggaccagccaaaaggatctttggcccatttacttaggcccaatatcatccaaagcccaaacaccacgtttgg 27964978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 148 - 315
Target Start/End: Original strand, 8300139 - 8300309
Alignment:
Q  148 tgatcaaatagactacctgcatagattttggtttcttctattcatttatta-agttttagttcttgatataatacctccacattgattgatctatatact 246  Q
    |||||||||||| || || ||||||| ||| |||||| |||| ||||| || ||||||||||||||||||| |      ||||||||||||  |||||||    
T  8300139 tgatcaaatagagtatctacatagatcttgctttcttttatttatttactacagttttagttcttgatatagtttgctgacattgattgat--atatact 8300236  T
Q  247 cat---ttccaccaatttt-acgatgcttggttgtggctgtttaattgaagtaaagaatttgcaaggacattt 315  Q
    |||   | ||||||| ||  | |||||||| |||||| |||||||||||| ||||||||||| ||||||||||    
T  8300237 cataattcccaccaagttggatgatgcttgattgtggttgtttaattgaattaaagaatttgaaaggacattt 8300309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 3e-83; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 19967288 - 19967564
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||| |||| ||||||| |||||||| ||| ||||| ||| |||  |||    
T  19967288 tgttctggaccggtcaaaaggacctttgatccatttacttaggcccaatacgatccaaagtccaaacaccacgtttgacaaagttacctgcgacacaccc 19967387  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| || |  ||||||||||| |||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||      
T  19967388 cttccacataagggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacca 19967487  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| |||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  19967488 cccacgatttcgtaaccgccagagccaggtgtgtcattacaacggttatgcaaccctccacctctataaatagggga 19967564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 319 - 593
Target Start/End: Original strand, 19441982 - 19442256
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||| | |||||| |||||||||||| ||||||||| |||  |||||    
T  19441982 ttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaatccaaaactcaaacaccacgtttggcaaagttacttgcgacacacccct 19442081  T
Q  419 ttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcc 518  Q
    | || || ||||||||  | |||| ||||||| |||||||| ||| |||||||||||||||  |||||||| ||||||||||||||||||||| ||||||    
T  19442082 tccacacaagggggtgtgcggagcgaaagagactggttcaatcgaaccacaacgtctctctacacgttcccacaataaactctctggcggttatacttcc 19442181  T
Q  519 catgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |  |||||| |||||||||||||||| |||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  19442182 cccgatttcgtaaccgccagagtcagatgtgtcattacaacggctttgcagcactccacctctataaatagggga 19442256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 8995308 - 8995583
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| ||||||| |||||||||| ||||||||||||| |||| |||||||| |||||||||| ||||| |||||||| |||  |||||||| |||| |||    
T  8995308 tgttttggaccgaccaaaaggacctttggcccatttacttagacccaatactatctaaagcctaaacaccacgtttgacaacattacttgcgacataccc 8995407  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    |||||  || ||||||||||| |||| |  ||||  ||||||| | |||||||||||||||| | |||||||||||||||||||| ||||||||||||||    
T  8995408 ctttcccacgagggggtgcacggagcgagcgagaccggttcaagcaagccacaacgtctctcagcacgttcccgcaataaactctatggcggttacactt 8995507  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| ||||||| ||||  |||||||||| | |||| ||| |||| ||||||||||||||||||||||||    
T  8995508 cccacgatttcgtaaccgctagagctaggtgtgtcaat-caacggctctgcagccctccacctctataaatagggga 8995583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 24973756 - 24974032
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| ||||||||||||||||   ||||| ||||||| ||||||||||||  ||| |||||||||||| ||||||| ||||  |||||||| |||   ||    
T  24973756 tgttatggaccggccaaaaggttctttggtccatttacttaggcccaatatcatccaaagcccaaacaccacgttttgcaaaattacttgcgacacatcc 24973855  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| ||  | |||||||||||||| | |||||||  ||||||||||| || |||||||||| |  || ||||| |||||||||| | |||||||||||||    
T  24973856 cttccaagcaagggggtgcacagaacgaaagagaccggttcaaacgaacctcaacgtctctttcaacattcccacaataaactcacaggcggttacactt 24973955  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||| ||||| | ||||||||||||||||    
T  24973956 cccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctctaactctataaatagggga 24974032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 9859302 - 9859021
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  |||| |  ||| | |||| || ||||| ||| |||  ||||||| ||||||||||||  ||||||||||||  |||    
T  9859302 tgttctggaccggccaaaaggatctttgacttattgacttagacctaatacaatccaaaatccaaacaccacgtttggcaaacttacttgcaacacaccc 9859203  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||||   | | ||||||||||||||| |  |||| | |||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9859202 ctttcctgcaaggggggtgcacagagcgagtgagactcgttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctttggcggttacact 9859103  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgt----cattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| |||||| ||||| || ||||||     |  ||||| ||| |||| ||||||||||||||||||||||||    
T  9859102 tcccacgatttcgtaaccgtcagagccaagtgtgtgtgcaaccacaacggctctgcagccctccacctctataaatagggga 9859021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 319 - 593
Target Start/End: Complemental strand, 38622132 - 38621857
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||||||||| ||||||||| |||| || ||||| ||||||||||||| ||| ||||| |||||||||||||| || |  |||||||| |||| |||||    
T  38622132 ttctggaccggacaaaaggacttttgacctatttacttaggcccaatacaatccaaagctcaaacatcacgtttagcgacattacttgcgacatacccct 38622033  T
Q  419 ttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttc 517  Q
    | |   | |||||| | ||| |||| |  ||||  |||| |||||| |||||||||||||||| |||||||||||||||| | | |||| |||||||||     
T  38622032 tccccgcgaggggggtccacggagcgagcgagatcggttaaaacgaaccacaacgtctctctgcacgttcccgcaataaattgtttggcagttacacttt 38621933  T
Q  518 ccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| |||||| ||||| |||||| ||  |||| ||||||||| ||| |||| ||||||||||||||| ||| ||||    
T  38621932 ccacgatttcgtaaccaccagagccaaatgtgccattacaacggctctgcagccctccacctctatatataaggga 38621857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 321 - 593
Target Start/End: Original strand, 21817605 - 21817884
Alignment:
Q  321 ctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccccttt 420  Q
    ||||||||||||||||||  ||||||||||| | ||||||||| ||| ||| |||||||||||| ||||||||||||  ||||| || |||  ||||||     
T  21817605 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttc 21817704  T
Q  421 cagaccaggggg-------tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
    ||    ||||||       ||||| || | |||||||  ||||||||||| || || ||||||| |  ||||||||||||||||||| | ||| ||||||    
T  21817705 cacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttaca 21817804  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||  || ||||||| |||||||||||||    
T  21817805 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaatagggga 21817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 453 - 593
Target Start/End: Original strand, 8990767 - 8990907
Alignment:
Q  453 ggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtca 552  Q
    ||||||| | |||||||||||||||||| |||||| | |||||||||||||| | ||||||||||||| |||||| ||||||| |||| |||||||| ||    
T  8990767 ggttcaagcaagccacaacgtctctctgcacgttctcacaataaactctctgacagttacacttcccacgatttcgtaaccgctagagccaggtgtgcca 8990866  T
Q  553 ttacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| ||| | || |||||||||||| |||||||||||    
T  8990867 ttacaacggctctacagccctccacctctgtaaatagggga 8990907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 500
Target Start/End: Original strand, 21815425 - 21815609
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||||||||||| |  ||||||||||| | ||||||||| ||| ||| ||| |||||||| ||||||||||||  ||||| |  |||  |||    
T  21815425 tgttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccc 21815524  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactc 500  Q
    ||| ||  | | |||||||||| || | ||||||| |||||||||||| || |||||||||| |  |||||||||||||||||||    
T  21815525 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactc 21815609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 319 - 500
Target Start/End: Complemental strand, 49472531 - 49472350
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||||||||| ||||||||  |||| |||||||| ||||||||||||| ||| |||| ||||||| | |||||| |||  ||||| || | |  |||||    
T  49472531 ttctggaccgggcaaaaggatctttgacccatttacttaggcccaataccatccaaagtccaaacaccgcgtttgacaaaattactcgcgaaacacccct 49472432  T
Q  419 ttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactc 500  Q
      ||  | ||||||||||| || | |||||||  |||||||| || || |||||||||| |  |||||||||||||||||||    
T  49472431 cccacgcgagggggtgcacggaacgaaagagaccggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactc 49472350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 506 - 593
Target Start/End: Original strand, 22186045 - 22186132
Alignment:
Q  506 cggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||||||||| |||||  |||||| | |||| ||||||| ||||||||| ||| |||| || |||||||||||||||||||||    
T  22186045 cggttacacttcccacgattttgtaaccgtccgagtaaggtgtgccattacaacggctctgcagccatccacctctataaatagggga 22186132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 317 - 514
Target Start/End: Complemental strand, 33029124 - 33028926
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||| ||  |||||| || ||| |||||| |||||  ||| |||||||||||| |||||||| | |  |||||||| |||  |||    
T  33029124 tgttctggaccggccaaaatgagttttggctcaattacttaggcacaatataatccaaagcccaaacaccacgtttgactatattacttgcgacacaccc 33029025  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttc-aaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    ||| |     |||||||| || ||||||  | ||  ||||| |||| | ||||||||||||| ||||||||| |||||||| ||||||  |||||||||    
T  33029024 cttccccgtgagggggtgaacggagcaagcgggaccggttcaaaacaaaccacaacgtctctatgtacgttctcgcaataatctctctaacggttacac 33028926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 593
Target Start/End: Original strand, 21815619 - 21815669
Alignment:
Q  543 aggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  21815619 aggtgtgccattacaacagctctgcagccctccacctctataaatatggga 21815669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 8e-81; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 12885610 - 12885334
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| |||||||||||||||||| |||| |||||||| ||||||||||||| ||| ||| |||||||| |||||||||||| |||||||||||||| |||    
T  12885610 tgttttggaccggccaaaaggacttttgacccatttacttaggcccaatacaatccaaaacccaaacaccacgtttggcaaagttacttgcaacataccc 12885511  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| |   | ||||||||||  |||| ||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  12885510 cttccccgcaagggggtgcatggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctggcggttacactt 12885411  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| |||||||||||| |||||||| ||||||||  ||| |||| |||||||||| |||||||||||||    
T  12885410 cccacgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagccctccacctttataaatagggga 12885334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 10985583 - 10985859
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||| ||| ||||  |||||| |||||||||||| ||||||||  |||  |||    
T  10985583 tgttctggaccgggcaaaaggacctttggcccatttacttaggcccaatacaatccaaaggtcaaacaccacgtttggcaaagttacttgtgacacaccc 10985682  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
     || |  || |||||||||||||||| || |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10985683 tttccccacaagggggtgcacagagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacactt 10985782  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| ||||||| |||| |||||||| ||||||||| ||| |||| || |||||||||||||||||||||    
T  10985783 cccacgatttcgtaaccgcgagagccaggtgtgccattacaacggctctgcagccatccacctctataaatagggga 10985859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 317 - 568
Target Start/End: Original strand, 16396135 - 16396387
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||| |||||| ||||| |||||||||||| ||||||||| |||  |||    
T  16396135 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagccaaaacaccacgtttggcaaagttacttgcgacacaccc 16396234  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||||  || |||||| ||||| ||||||  |||| |||||||| ||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  16396235 ctttcccacaaggggggtgcacggagcaagcgagactggttcaagcgaaccacaacgtctctctacacgttcccgcaataaacactctggcggttacact 16396334  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgca 568  Q
    |||||||||||| ||| ||||||||||||||||| || |||||| ||| ||||    
T  16396335 tcccatgatttcctaatcgccagagtcaggtgtgccactacaacggctctgca 16396387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 3268665 - 3268388
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||| ||| || ||| | |||||||||| |   ||||||||  |||||||  |||  |||    
T  3268665 tgttcgggaccggccaaaaggacctttggcccatttacttaggctcaaaacaatccacagcccaaacaccgattttggcaaaattacttgtgacacaccc 3268566  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || || | |||||||||| |||| | ||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  3268565 cttccacacaaggggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 3268466  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||| | |||||||||||| |||||||||||||||||  ||| |||| ||||||||||||||||||||||||    
T  3268465 tcccacgattacgtaaccgccagagccaggtgtgtcattacaatggctctgcagccctccacctctataaatagggga 3268388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 21332413 - 21332690
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||| || ||||||||| ||  ||||||||||||| ||||| ||||||| ||  |||| |||||||  ||||||||||| ||||||||| |||  |||    
T  21332413 tgttctagatcggccaaaatgatctttggcccatttacttaggtccaatacaattcaaagtccaaacactacgtttggcaaagttacttgcgacacaccc 21332512  T
Q  417 ctttc-agaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||||| | || |||||||||||||||| ||||||| |||||||||||| |||||||||||||||  |||||||| ||||||||| ||||||||||| |||    
T  21332513 ctttccacacaagggggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccacaataaactttctggcggttatact 21332612  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||| ||| |||||||| |||||||| || |||||| ||| |||| |||||||||||| |||||||||||    
T  21332613 tcccatgatttcgtaagcgccagagccaggtgtgccactacaacggctctgcagccctccacctctgtaaatagggga 21332690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 12217885 - 12217615
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||| |||||||||||| ||||||||||||| |||| || ||||| ||| | |||||||||| | ||||| ||||  ||||||||||||  |||    
T  12217885 tgttctggactggccaaaaggacctttggcccatttacttagtcctaatacaatccacagcccaaacaccgcgtttagcaaaattacttgcaacacaccc 12217786  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| || ||  |||||||||| |||| | ||||| |||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12217785 cttccacacatgggggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctggcggttacactt 12217686  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    || | |||||| |||||||||||| |||||      ||||||| ||| |||| ||||||||||||||||||||||||    
T  12217685 cctacgatttcgtaaccgccagagccaggt------ttacaacggctctgcagccctccacctctataaatagggga 12217615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 25240025 - 25239748
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||  || |||||| ||||| |||||||| |||  ||||| || |||  ||     
T  25240025 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactccaaagcctaaacaccacgtttgacaaaattactcgcgacacacct 25239926  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||||||  | | |||||||||| || | ||||||| |||||||||||| || ||| |||||| |  ||||||||||||||||||| | ||||||||||||    
T  25239925 ctttcacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaaagtctctttccacgttcccgcaataaactcacaggcggttacact 25239826  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||  ||||| |||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  25239825 tcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 25239748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 427 - 593
Target Start/End: Complemental strand, 3270766 - 3270600
Alignment:
Q  427 agggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgattt 526  Q
    ||||||||||| |||||| ||||| |||||||||||| |||||||||||| ||  |||||||||||||||||||||| |||||||||||||||| |||||    
T  3270766 agggggtgcacggagcaacagagactggttcaaacgaaccacaacgtctcactacacgttcccgcaataaactctctagcggttacacttcccacgattt 3270667  T
Q  527 cataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    | ||||| |||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  3270666 cgtaaccaccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 3270600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 9901571 - 9901847
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||| ||| ||||||||  ||  ||||||||| |||||| |||||| ||| ||||| |||| ||||||||||||||  |||||||| |||  ||     
T  9901571 tgttctggatcggtcaaaaggagcttatgcccatttacttaggctcaatacaatcaaaagcgcaaatatcacgtttggcaatattacttgcgacacacct 9901670  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| |   | ||||||||||| |||| |   |||  |||||||| || |||||||||||||||| || |||||||||||| |||||| |||||||||| |    
T  9901671 cttccctgcaagggggtgcacggagcgagctagatcggttcaaatgaaccacaacgtctctctggacattcccgcaataatctctctagcggttacacgt 9901770  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| |||||| ||||| |||||||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  9901771 cccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcaaccctccacctctatatatagggga 9901847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 581
Target Start/End: Original strand, 26780684 - 26780949
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  |||||||||||||  |||||||||||| ||  |||||||||||| ||||||||||||  |||||||| |||  |||    
T  26780684 tgttctggaccggccaaaaggagttttggcccatttacataggcccaatactattcaaagcccaaacaccacgtttggcaacattacttgctacacaccc 26780783  T
Q  417 ctt-tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || |    ||||||| |  |||  ||  ||   || |||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  26780784 cttctctgtgaggggggtgtagggagagaacaaggccggctcaaacgaaccacaacgtttctctgcacgttcccgcaataatctctctggcggttacact 26780883  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctct 581  Q
    ||||| | |||| ||||| |||||||| |||||||||||||||| ||| |||| ||||||||||||    
T  26780884 tcccacgttttcgtaaccaccagagtctggtgtgtcattacaacggctctgcagccctccacctct 26780949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 584
Target Start/End: Complemental strand, 45313476 - 45313209
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  |||| |||||||| ||||||||||||| ||  ||||||||| || || |||||||||  |||||||| |||  |||    
T  45313476 tgttctggaccggccaaaaggaactttgacccatttacttaggcccaatacaattcaaagcccaagcaccatgtttggcaacattacttgcgacacaccc 45313377  T
Q  417 ctt-tcagaccagggggtgcacagagcaaa-agagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    ||| || | | || |||||||| |||| |  | ||| |||||||||||| | |||||||||||||| |||||||| |||||| |||||||||||||||||    
T  45313376 cttctccg-cgagagggtgcacggagcgagcaaagactggttcaaacgaactacaacgtctctctgcacgttccc-caataatctctctggcggttacac 45313279  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctata 584  Q
    |||||| |||||| |||||||||||| | |||||| ||||||||| | | |||||||||| |||||||||    
T  45313278 ttcccacgatttcgtaaccgccagagcctggtgtgccattacaacggatttgcaaccctctacctctata 45313209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 316 - 591
Target Start/End: Complemental strand, 13861645 - 13861369
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    |||||||||||||||||||||||  |||| | |||||| ||||||||||||| ||| |||||||||||| ||||| ||| ||  ||||| || |||  ||    
T  13861645 gtgttctggaccggccaaaaggatctttgactcatttacttaggcccaataccatccaaagcccaaacaccacgtctggtaaaattactcgcgacacacc 13861546  T
Q  416 cctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||| ||  | |||||| ||||| || | ||||| |  ||||||||||| || |||||||||| |  ||||||||||||||||||| | ||| |||||||    
T  13861545 ccttccacgcgaggggggtgcacggaacgaaagataccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacac 13861446  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaataggg 591  Q
    |||||| |||||| |||| |  ||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||    
T  13861445 ttcccacgatttcgtaactgttagagtaaggtgtgccattacaacggctttgcagccctccacctctataaataggg 13861369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 428 - 593
Target Start/End: Original strand, 17282471 - 17282636
Alignment:
Q  428 gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttc 527  Q
    |||||||||| || | ||||||| |||||| ||||| || |||||||||| |  ||||||||||||||||| | |  |||||||||||||||| || |||    
T  17282471 gggggtgcacggaacgaaagagactggttctaacgaaccccaacgtctctttccacgttcccgcaataaacccacaagcggttacacttcccacgaattc 17282570  T
Q  528 ataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     |||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  17282571 gtaaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 17282636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 8082375 - 8082098
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||| |||||||||  || |||||||| | ||||||||||||| ||| |||||||||||| ||||||| ||||  |||||||| || | |||    
T  8082375 tgttctggaccgtccaaaaggatcttaggcccattcacttaggcccaatacaatccaaagcccaaacaccacgttttgcaacattacttgcgacttaccc 8082276  T
Q  417 cttt-cagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||| | |   ||||||||||| ||||||    ||  ||||||||||||||| ||| ||| | || ||||||||||||| |  |||||||||||||||||    
T  8082275 cttttccgcgaagggggtgcacggagcaagcaggaccggttcaaacgagccataacatctatttgcacgttcccgcaattatttctctggcggttacact 8082176  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    | ||| |||||| |||| |   ||  |||||||| ||||||||  ||| ||||  |||||||||||||| ||||||||    
T  8082175 ttccacgatttcgtaactgttggacccaggtgtgccattacaatggctctgcagtcctccacctctatatatagggga 8082098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 28892243 - 28891962
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||  || || ||||||||||||||||||||| ||||||||  |||||| |||||||| |||  |||||||| |||| |||    
T  28892243 tgttctggaccggtcaaaaggatcttaggtccatttatttaggcccaatacaatctaaagttcaaacaccacgtttgccaacattacttgcgacataccc 28892144  T
Q  417 ctt-tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || |   |||| |||||| ||||||   |||   |||||||||| ||||||||||||| || ||||| || |||| |  ||||||| |||||||||    
T  28892143 cttctccgcgaagggagtgcacggagcaagcaagacctgttcaaacgaaccacaacgtctctttgcacgtttccacaattatttctctggtggttacact 28892044  T
Q  516 tcccatgatttcataaccgcca----gagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| ||||||  ||| ||||    ||  ||| |||| ||||||||| |||||||| | ||||||||||||| ||||||||    
T  28892043 tcccacgatttcgcaactgccaaccggacccagatgtgccattacaacggctatgcagctctccacctctatatatagggga 28891962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 320 - 593
Target Start/End: Complemental strand, 49403013 - 49402746
Alignment:
Q  320 tctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctt 419  Q
    |||||||||||||||||   ||||| |||||||| ||||||| |||     |||||||||||| | ||| |||||||   |||||| | |||  ||||||    
T  49403013 tctggaccggccaaaag---atttgacccatttacttaggcctaat-----ctaaagcccaaataccacttttggcagcattacttacgacacacccctt 49402922  T
Q  420 tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgt--acgttcccgcaataaactctctggcggttacacttc 517  Q
     |   | ||||||||||||||||||   |||  ||||||||||  | ||||||||||||| |  ||||| ||||||||| |||| ||||||||||||||     
T  49402921 ccctgcgagggggtgcacagagcaagcaagaccggttcaaacggactacaacgtctctctctgcacgtttccgcaataatctctatggcggttacacttt 49402822  T
Q  518 ccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| ||| || |||||||||||| | |||||| ||||||||| ||| |||| ||||||||||||||| ||||||||    
T  49402821 ccacgatctcgtaaccgccagagcctggtgtgccattacaacggctctgcagccctccacctctatatatagggga 49402746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 397
Target Start/End: Original strand, 18284484 - 18284564
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaa 397  Q
    |||| |||||||||||||||||  ||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  18284484 tgttatggaccggccaaaaggatctttggcccatttaattaggcccaataccatccaaagcccaaacatcacgtttggcaa 18284564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 454 - 584
Target Start/End: Complemental strand, 15455633 - 15455503
Alignment:
Q  454 gttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcat 553  Q
    |||||||||||||||||||||||| || ||||| | ||||| |  ||||| ||| ||||||||||||| ||||||||||||||| |  |||||||| | |    
T  15455633 gttcaaacgagccacaacgtctctttgcacgtttctgcaattatttctcttgcgtttacacttcccattatttcataaccgccaaacacaggtgtgcctt 15455534  T
Q  554 tacaacagctatgcaaccctccacctctata 584  Q
     |||||  || |||| |||||||||||||||    
T  15455533 cacaacgactttgcatccctccacctctata 15455503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 3270827 - 3270777
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatac 367  Q
    |||| |||||||| ||||||||| ||||||||||||| |||||||||||||    
T  3270827 tgttttggaccggtcaaaaggacttttggcccatttacttaggcccaatac 3270777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 396
Target Start/End: Complemental strand, 8168087 - 8168007
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggca 396  Q
    |||||||| | ||| ||||||||  |||| |||||||| ||||| ||||||| ||| |||||||||||| || ||||||||    
T  8168087 gtgttctgaatcgggcaaaaggagttttgacccatttacttaggtccaatacaatccaaagcccaaacaccatgtttggca 8168007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 3e-77; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 320 - 593
Target Start/End: Original strand, 18573889 - 18574163
Alignment:
Q  320 tctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctt 419  Q
    |||||||||||||||||||  ||||| ||||||| ||||||| ||||| ||  |||||||||||| |||||||||||| ||||||||| |||   |||||    
T  18573889 tctggaccggccaaaaggatttttggtccatttacttaggcctaatacaatgcaaagcccaaacaccacgtttggcaaagttacttgcgacacatccctt 18573988  T
Q  420 tcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcc 518  Q
     || || |||||| ||||  |||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  18573989 ccacacaaggggggtgcatggagcaaaagagagtggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctggcggttacacttcc 18574088  T
Q  519 catgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    || |||||| |||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  18574089 cacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 18574163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 318 - 593
Target Start/End: Original strand, 32008884 - 32009159
Alignment:
Q  318 gttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccc 417  Q
    |||||||||||||||||||||| |||| ||||| || ||||||||||||| ||| |||||||||||| |||||||| ||| ||||||||  |||  ||||    
T  32008884 gttctggaccggccaaaaggacctttgacccatatacttaggcccaatacaatcgaaagcccaaacaccacgtttgacaaagttacttgtgacacacccc 32008983  T
Q  418 tttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttc 517  Q
    || |  || ||||||||||| |||| ||||||| |||||||||||| ||||| |||||||||| ||||||||||||||| |||||| ||| |||||||||    
T  32008984 ttcctcacaagggggtgcacggagcgaaagagactggttcaaacgaaccacagcgtctctctgcacgttcccgcaataatctctctagcgattacacttc 32009083  T
Q  518 ccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| |||||| ||||||||||||||||||||| ||||||||| ||| | || ||||||||||||||||||||||||    
T  32009084 ccacgatttcgtaaccgccagagtcaggtgtgccattacaacggctctacagccctccacctctataaatagggga 32009159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 312 - 586
Target Start/End: Complemental strand, 7999984 - 7999711
Alignment:
Q  312 atttgtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaaca 411  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| | | ||| |||| | ||||||||||  |||||||| |||    
T  7999984 atttttgttctggaccggccaaaaggacatttggcccatttacttaggcccaatacaatccacaacccgaacaccgcgtttggcaaaattacttgcgaca 7999885  T
Q  412 tccccctttcagaccagggg-gtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggtt 510  Q
      |||||| || || ||| | |||||| |||| | ||||| |||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||||    
T  7999884 caccccttccacacaaggcgagtgcacggagcgacagagactggttccaacgaaccacaacgtctctctgcatgttcccgcaataaactctctggcggtt 7999785  T
Q  511 acacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaa 586  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||||| ||  ||||  ||||||||||||||||    
T  7999784 acacttcccacgatttcgtaaccgccagagccaggtgtgtcattacaacggc--tgcagtcctccacctctataaa 7999711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 18040357 - 18040627
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||| ||||  ||| |||||||||||| ||      |||| ||||||||  |||  |||    
T  18040357 tgttctggaccggccaaaaggacctttggcccatttacttaggcc-aatataatccaaagcccaaacacca------gcaaagttacttgtgacacaccc 18040449  T
Q  417 ctttcagaccagg-gggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || || ||| |||||||| |||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18040450 cttccacacaaggtgggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 18040549  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| |||||| ||||| |||||||| ||||||||| ||| |||| | ||||||||||||||||||||||    
T  18040550 tcccacgatttcgtaaccgtcagagccaggtgtgccattacaacggctctgcagctctccacctctataaatagggga 18040627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 312 - 593
Target Start/End: Original strand, 41280672 - 41280955
Alignment:
Q  312 atttgtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaaca 411  Q
    |||| ||||||||||||| ||||||||| |||| |||||||| |||||||||| || ||| |||||||||||| || |||||||||  |||||||| |||    
T  41280672 atttttgttctggaccggacaaaaggacctttgacccatttacttaggcccaacacaatccaaagcccaaacaccatgtttggcaacattacttgcgaca 41280771  T
Q  412 t-ccccctttcagaccaggggg--tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcgg 508  Q
      |||||||||  || ||||||  ||||| |||| |   |||  |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  41280772 caccccctttcgcacaagggggggtgcacggagcgagcaagaccggttcaaacgagccacaacg-ctctctgcacgttcccgcaataaactctctggcgg 41280870  T
Q  509 ttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||| |||||  ||||| ||||||||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||    
T  41280871 ttacacttcccacgattttgtaacccccagagtcaggtgtgccattacaacggctctgcagtcctccacctctataaatagggga 41280955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 360 - 579
Target Start/End: Complemental strand, 24034053 - 24033833
Alignment:
Q  360 cccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccaggggg-tgcacagagcaaaagagaatggttca 458  Q
    |||||||| ||| ||| || ||||| |||||| ||||| |||||||||  ||  ||||||||  || |||||| ||||| ||| ||| |||| |||||||    
T  24034053 cccaatacaatccaaatcctaaacaccacgttcggcaaagttacttgcgtcacacccctttcccacaaggggggtgcacggagaaaacgagactggttca 24033954  T
Q  459 aacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaa 558  Q
    ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| ||||| ||||| ||||||||    
T  24033953 aacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggttacactttccacgatttcgtaaccgccaaagtcaagtgtgccattacaa 24033854  T
Q  559 cagctatgcaaccctccacct 579  Q
    | ||| |||||||||||||||    
T  24033853 cggctctgcaaccctccacct 24033833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 348 - 593
Target Start/End: Original strand, 2085642 - 2085888
Alignment:
Q  348 catttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccaggggg-tgcacagagcaaaa 446  Q
    |||||| ||||||||||| | ||  |||||| ||||| ||||||||| || |||||||||||||  |||||| ||  | |||||| | ||| |||| |||    
T  2085642 catttacttaggcccaatgcaattcaaagcctaaacaccacgtttggaaaagttacttgcaacacaccccttccaagcaaggggggtacacggagcgaaa 2085741  T
Q  447 gagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggt 546  Q
    |||| | |||||||||| |||||| ||||||||| | |||||||||||||||   |||||  |||||||||||| |||||| |||||||||||| |||||    
T  2085742 gagactagttcaaacgaaccacaatgtctctctgcatgttcccgcaataaacgacctggcaattacacttcccacgatttcgtaaccgccagagccaggt 2085841  T
Q  547 gtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| ||||||||| | | |||| ||||||||||||||||||||||||    
T  2085842 gtgccattacaacggttctgcagccctccacctctataaatagggga 2085888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 7454521 - 7454812
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||| ||||| |||||||||| || ||| |||||||||||  ||||||||||||  ||||||||||||  |||    
T  7454521 tgttctggaccggccaaaaggatctttggcctatttacttaggcccaacacaatccaaagcccaaactccacgtttggcaaacttacttgcaacacaccc 7454620  T
Q  417 ctt-tcagaccaggggg--------------tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactct 501  Q
    ||| || | |  |||||              ||||| |||| |  ||||  |||||| |||||||||||||||||| || |||||||| |||||||||||    
T  7454621 cttctccgccgggggggggggggggggggggtgcacggagcgagcgagaccggttcatacgagccacaacgtctctatgcacgttcccacaataaactct 7454720  T
Q  502 ctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     || ||||||||||||||| |||||| |||||||||||| |||||||| ||||||||| ||| |||| || |||||||||||||||||||||    
T  7454721 atgacggttacacttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccttccacctctataaatagggga 7454812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 453 - 593
Target Start/End: Complemental strand, 11709562 - 11709422
Alignment:
Q  453 ggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtca 552  Q
    ||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||||| |||||| |||  ||||||| | |||||| ||    
T  11709562 ggttcaaacgaaccacaacgtctctctgcacgttcccacaataatctctctggcggttacacttcccacgatttcgtaaatgccagagcctggtgtgcca 11709463  T
Q  553 ttacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| ||| |||||||||||||||||||| ||||||||    
T  11709462 ttacaacggctctgcaaccctccacctctatatatagggga 11709422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 459 - 593
Target Start/End: Original strand, 10532801 - 10532935
Alignment:
Q  459 aacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaa 558  Q
    ||||| |||||||||||||||  ||||||| ||||||||| | ||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||||    
T  10532801 aacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcggttacactttccacgatttcgtaaccgccagagtcaggtgtgccattacaa 10532900  T
Q  559 cagctatgcaaccctccacctctataaatagggga 593  Q
    | ||| |||| ||||||||||||||||||||||||    
T  10532901 cggctctgcagccctccacctctataaatagggga 10532935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 25821047 - 25820770
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||| |||||||| |||| ||||| ||| |||||||||||| ||||||||||||  ||||| || |||  | |    
T  25821047 tgttctggaccggccaaaaggatctttggccaatttatttgggccgaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacaaacac 25820948  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| |     |||||| |||||  | | ||||  |  | ||||||||| || |||||||||| |  ||||||| ||||||||||| | ||||||||||||    
T  25820947 cttccgtgtgaggggggtgcacgaaacgaaaggaaccgattcaaacgaaccccaacgtctctttccacgttccagcaataaactcacaggcggttacact 25820848  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||| ||||||||||    
T  25820847 tcccacgatttcgtaaccgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctaaaaatagggga 25820770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 317 - 584
Target Start/End: Original strand, 22609363 - 22609631
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||| |||||||||  ||||  ||||||| ||||||||||||| ||| |||||||||||| || ||||| |||  ||| ||||||||   ||    
T  22609363 tgttctggaccgaccaaaaggatctttgatccatttacttaggcccaatac-atccaaagcccaaacaccatgtttgacaacattatttgcaacacatcc 22609461  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| |   | ||||||||||| |||| |  |||| |||||||||||| |||| |  |||||||| | |||| |||||||||||||||| ||||||||| |    
T  22609462 cttccctgcgagggggtgcacggagcgagcgagattggttcaaacgaaccacgatatctctctgcatgttcacgcaataaactctctgtcggttacacat 22609561  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgt--cattacaacagctatgcaaccctccacctctata 584  Q
    | || |||||| |||||||||||| |||||||||  ||| |||||  || ||||||||||||||||||||    
T  22609562 ctcacgatttcgtaaccgccagagccaggtgtgtaccatcacaacgactctgcaaccctccacctctata 22609631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 318 - 593
Target Start/End: Complemental strand, 24060888 - 24060612
Alignment:
Q  318 gttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccc 417  Q
    |||||||||||| ||||||||  ||||||||||||| ||||||||||||| ||| |||| | ||| | |||||| || ||  |||||||| |||  ||||    
T  24060888 gttctggaccggtcaaaaggagctttggcccatttacttaggcccaatacaatccaaagtcgaaataccacgttaggaaacattacttgcgacacacccc 24060789  T
Q  418 tttcagaccaggg-ggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    || |   | |||| ||||||| ||||||   |||  ||||| ||||| ||||||| |||||||| | ||||| ||||||| ||||||||| |||||||||    
T  24060788 ttccccgcgagggaggtgcacggagcaagcaagaccggttctaacgaaccacaacatctctctgcatgttcctgcaataatctctctggcagttacactt 24060689  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    || | |||||  |||||||||||| | |||||| ||| ||||| ||| |||| ||||||||||||||| ||| ||||    
T  24060688 cctacgattttgtaaccgccagagcctggtgtgccatcacaacggctctgcagccctccacctctatatataaggga 24060612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 341 - 480
Target Start/End: Complemental strand, 17775926 - 17775787
Alignment:
Q  341 tttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccagggggtgcacaga 440  Q
    |||||||||||||  |||| ||||||| ||| ||||||||||||||||||||||||| ||||||||| |||  |||||| || || |||||||| || ||    
T  17775926 tttggcccatttacctaggtccaatacaatccaaagcccaaacatcacgtttggcaaagttacttgcgacacaccccttccacacaagggggtgtacgga 17775827  T
Q  441 gcaaaagagaatggttcaaacgagccacaacgtctctctg 480  Q
    || ||||||| |||||||| ||| ||||||||||||||||    
T  17775826 gcgaaagagactggttcaatcgaaccacaacgtctctctg 17775787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 317 - 520
Target Start/End: Original strand, 33273391 - 33273595
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| ||||||| |||||||||  ||||||||||||| ||||||| ||||| ||| |||||||||||| ||||||||||||  ||||||||||||  | |    
T  33273391 tgttatggaccgaccaaaaggatctttggcccatttacttaggcctaatactatccaaagcccaaacaccacgtttggcaaatttacttgcaacacactc 33273490  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
     | ||   | |||||| |||   |||| |   |||  |||||||||||||||||||||||||||| |||||||||||||||  ||| |||||||||||||    
T  33273491 ttctcccgcaaggggggtgcgaggagcgagcaagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataagttctatggcggttacact 33273590  T
Q  516 tccca 520  Q
    |||||    
T  33273591 tccca 33273595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 407
Target Start/End: Complemental strand, 11709709 - 11709621
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgc 407  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||| ||| |||||||||| | |||||||| |||  ||||||||    
T  11709709 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatacaatccaaagcccaaataccacgtttgacaatattacttgc 11709621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 337 - 507
Target Start/End: Original strand, 10532629 - 10532800
Alignment:
Q  337 gacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccaggggg-tgc 435  Q
    |||||||| |||||||| ||||||||||||| ||  ||||| |||||  |||||||||||| | |||||||  ||  |||||| ||  | |||||| | |    
T  10532629 gacatttgacccatttacttaggcccaataccattcaaagctcaaacgccacgtttggcaaagatacttgcggcacaccccttacatgcaaggggggtac 10532728  T
Q  436 acagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcg 507  Q
    ||  ||| ||||||| |||||||||||| |||||||||||||||  ||||||| ||||||||| | ||||||    
T  10532729 acgaagcgaaagagattggttcaaacgaaccacaacgtctctctccacgttcctgcaataaacaccctggcg 10532800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 545 - 593
Target Start/End: Original strand, 33273604 - 33273652
Alignment:
Q  545 gtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  33273604 gtgtgccattacaacggctctgcaaccctccacctctataaatagggga 33273652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 146; Significance: 1e-76; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 316 - 593
Target Start/End: Complemental strand, 29165179 - 29164903
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    ||||||||||||||||||| | ||||||| |||||||||||||||||||||| | | |||||||||||| |||||||||||| ||||||||  |||  ||    
T  29165179 gtgttctggaccggccaaacg-acatttgacccatttatttaggcccaatacaacccaaagcccaaacaccacgtttggcaaagttacttgtgacacacc 29165081  T
Q  416 cctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||||||  || ||||||||||| |||| || |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||| || ||||||||    
T  29165080 cctttcccacaagggggtgcacggagcgaacgagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctagcagttacact 29164981  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||||  | ||||||||||||||||||||||| ||| |||| || |||||||||||||||||||||    
T  29164980 tcccacgatttcgtaacttctagagtcaggtgtgtcattacaacggctctgcagccgtccacctctataaatagggga 29164903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 30770057 - 30770332
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| ||||  ||||||| ||||||||||||| ||  ||||||||||||||||||||| | | ||||||||| |||  |||    
T  30770057 tgttctggaccggccaaaaggacctttgaaccatttacttaggcccaatacaattcaaagcccaaacatcacgtttgacgaagttacttgcgacacaccc 30770156  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| || || ||||||||||| |||| |||| || |||||||||||| | |||||||||||||  |||||||||||||||||||| |||| |||||||||    
T  30770157 cttccacacaagggggtgcacggagcgaaagggactggttcaaacgaac-acaacgtctctctacacgttcccgcaataaactctttggcagttacactt 30770255  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     ||| |||||| |||||||||||| |||||||| ||||||||| ||| |||| | ||||||||||||||||||||||    
T  30770256 tccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagcactccacctctataaatagggga 30770332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 315 - 593
Target Start/End: Complemental strand, 20093868 - 20093590
Alignment:
Q  315 tgtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcc 414  Q
    ||||||||| | ||||||||||||  |||| |||||||| ||||| ||||||| ||| |||| ||||||| |||||||| ||| |||||||||||||  |    
T  20093868 tgtgttctgaatcggccaaaaggatctttgacccatttacttaggtccaatacaatccaaagtccaaacaccacgtttgtcaaagttacttgcaacaaac 20093769  T
Q  415 ccctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    ||||| || || || |||||||| |||| | ||||| |||||||||||| |||||||||||||||| || |||||||||||| |||| ||| ||||||||    
T  20093768 cccttccacacaagagggtgcacggagcgacagagactggttcaaacgaaccacaacgtctctctgcacattcccgcaataagctctttggtggttacac 20093669  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| |||||| ||||||| || | |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  20093668 ttcccacgatttcgtaaccgctagggccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 20093590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 22705929 - 22705653
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||| |||||| |||||||||||||| |||||||| ||||||||||||| ||| |||| |||| || |||||||| ||| |||||||||||||  |||    
T  22705929 tgttctagaccggtcaaaaggacatttgacccatttacttaggcccaatacaatccaaagtccaa-caccacgtttgacaaagttacttgcaacacaccc 22705831  T
Q  417 ctttcagaccagg-gggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | ||| |||||||| |||| ||||||| | |||||||||| ||||||||| |||||| ||||||| |||||||| |||||  ||||||||||    
T  22705830 cttccatgcaaggcgggtgcacggagcgaaagagactagttcaaacgaaccacaacgtttctctgcacgttcctgcaataaattctctaccggttacact 22705731  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||| |||||||||||| |||||||| ||||||||  ||| ||||  |||||||||||||||||| ||||    
T  22705730 tcccatgatttcgtaaccgccagagccaggtgtgccattacaatggctctgcagtcctccacctctataaatacggga 22705653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 18153459 - 18153182
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||  |  |||||||||||| || |||||||||  ||||| || |||  |||    
T  18153459 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactacaaagcccaaacaccatgtttggcaaaattactcgcgacacaccc 18153360  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | | |||||||||| || ||||||||| |||||||||||| || |||||||||| |  |||||||| |||||||||| | ||||||||||||    
T  18153359 cttccacgcgaggggggtgcacggaacaaaagagactggttcaaacgaaccccaacgtctctttccacgttcccacaataaactcgcaggcggttacact 18153260  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||  ||||| |||||| |||||| || |||| |||||||||  ||  ||| ||||||||||||||||||||||||    
T  18153259 tcccaccatttcgtaaccgtcagagtaagctgtgccattacaacgactcggcagccctccacctctataaatagggga 18153182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 319 - 593
Target Start/End: Complemental strand, 21802779 - 21802504
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||| |||| | |||| |||||||||| |||||| ||||||| ||||| ||||||||| |||||| |||||||| ||| ||||||| |||||  | |||    
T  21802779 ttctgaaccgtctaaaatgacatttggctcatttacttaggccgaatacaatctaaagctcaaacaccacgtttgtcaaagttactttcaacacacgcct 21802680  T
Q  419 ttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttc 517  Q
    | ||  | |||||| ||||| |||| || |||| ||||||| |||| |||||||||||||||| | |||| ||||||||||||||| || ||||||||||    
T  21802679 tccacgcaaggggggtgcacggagcgaaggagactggttcagacgaaccacaacgtctctctgcaggttctcgcaataaactctctcgctgttacacttc 21802580  T
Q  518 ccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    | | |||||| ||||| |||||| |||||||| ||||||||| ||| || | ||||| ||||||||||||||||||    
T  21802579 ctacgatttcgtaaccaccagagccaggtgtgccattacaacggctctgtagccctcaacctctataaatagggga 21802504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 7595684 - 7595403
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| |||||||| ||||||||  ||||||||||||| | ||||||||||| ||  |||||  ||||| |||| |||||||  ||||||||||||  |||    
T  7595684 tgttttggaccggtcaaaaggatctttggcccatttactcaggcccaatacaattcaaagcttaaacaccacgcttggcaaacttacttgcaacacaccc 7595585  T
Q  417 ctttcagaccag-----ggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggtta 511  Q
    ||| |  ||  |     ||||||||| |||| |  ||||  ||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  7595584 cttccccacaggaggggggggtgcacggagcgagcgagaccggttcaaacgaaccacaatgtctctctgcacgttcccgcaataaactctctggcggtta 7595485  T
Q  512 cacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||| |||||| ||||  |||| | ||||||||  |||||||| ||| |||| ||||||||||||||||||||||||    
T  7595484 cacttcccacgatttcgtaacatccagcgccaggtgtgctattacaacggctttgcagccctccacctctataaatagggga 7595403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 9548828 - 9549114
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  |||||||||||||  ||| |||||||| ||| |||||||||||  ||||||||| |  ||||||||| |||  |||    
T  9548828 tgttctggaccggccaaaaggatgtttggcccatttacgtagtcccaatacaatccaaagcccaaacgccacgtttggtatagttacttgcgacacaccc 9548927  T
Q  417 cttt-cagaccagggggtg---------cacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggc 506  Q
    |||| |  || |||||| |         ||  ||||||  |||| ||||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  9548928 ctttacccacaaggggggggggggggggcatggagcaagcgagactggttcaaacgaaacacaacgtctctctgcacgttcccgcaataaactctctggc 9549027  T
Q  507 ggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||||| |||||| ||||||| |||| |||||||| |  |||||| ||| |||| |||||||||| |||||| ||||||    
T  9549028 ggttacacttcccacgatttcgtaaccgctagagccaggtgtgcctctacaacggctctgcagccctccacctttataaaaagggga 9549114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 330 - 593
Target Start/End: Original strand, 47295564 - 47295827
Alignment:
Q  330 ccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccagg 429  Q
    |||||||||  |||| |||||||| ||||| |||||||  |  |||||||||||| ||||||||| ||  ||||| || |||  ||| || ||  | |||    
T  47295564 ccaaaaggatctttgacccatttacttaggtccaatacactacaaagcccaaacaccacgtttggaaaaattactcgcgacacacccattccacgcgagg 47295663  T
Q  430 gggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcat 529  Q
    |||||||| || | || |||| |||||||||||| || ||||||||||||  || |||||||||||||||| |  ||| |||||||||||| |||||| |    
T  47295664 gggtgcacggaacgaaggagactggttcaaacgaaccccaacgtctctctccaccttcccgcaataaactcacaagcgtttacacttcccacgatttcgt 47295763  T
Q  530 aaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  47295764 aaccgtcagagtaaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 47295827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 2249860 - 2250137
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||  |||||||||  |||| || ||||| |||  |||||||| ||  ||||| |||| | ||||||||||||  |||||||| |||  |||    
T  2249860 tgttctggaccaaccaaaaggagctttgacctatttacttattcccaatacaattcaaagctcaaataccacgtttggcaacattacttgcgacacaccc 2249959  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| |   | | |||||||||| ||||||   ||| |||||||||||| |||||||||||||||| |||||||||||||||  ||||| ||||||||| |    
T  2249960 cttccccgcaaggggggtgcacggagcaagcaagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataatatctctagcggttacaat 2250059  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||  ||||||||| || | |||||| ||||||||| ||| |||||||||||||||||||| ||||||||    
T  2250060 tcccacgattttgtaaccgccaaagcctggtgtgccattacaacggctctgcaaccctccacctctatatatagggga 2250137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 21592744 - 21593023
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||||||||||| |  ||||||||||| | ||||||||||||| ||| |||| ||||||| || ||||||| |  ||||| || |||  |||    
T  21592744 tgttctggaccggccaaaagaatctttggcccattcacttaggcccaataccatccaaagtccaaacaccatgtttggctaaattactcgcgacacaccc 21592843  T
Q  417 ctttcagaccaggggg---tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
    ||| ||  | ||||||   ||||| || | ||||||| |||||||||||| || |||||||||| |  ||||||||| ||||| ||  | | ||||||||    
T  21592844 cttccacgcgaggggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgtaataagctaacagacggttaca 21592943  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| |||||  |||||| |||||| ||||||| ||||||||| |||  ||| ||||||||||||||||||||||||    
T  21592944 cttcccacgattttgtaaccgtcagagtaaggtgtgccattacaacggctcagcagccctccacctctataaatagggga 21593023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 317 - 584
Target Start/End: Complemental strand, 38612888 - 38612620
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||| || ||||||||  |||| |||||||| |||||| |||||| ||  |||||||||||| ||||||||||||  |||||||||| |  |||    
T  38612888 tgttctggactggtcaaaaggagctttgacccatttacttaggctcaatactattcaaagcccaaacaccacgtttggcaacattacttgcaaaacaccc 38612789  T
Q  417 ctttcagaccagggggt-gcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| |   | ||||||| |||| ||||||    |   ||||||||||| |||||||||| ||||| |||||||| |||||| ||||||||| ||||||||    
T  38612788 cttcctcgcgagggggttgcacggagcaagcagggccggttcaaacgaaccacaacgtccctctgcacgttcccacaataatctctctggcagttacact 38612689  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctata 584  Q
    ||||| |||||  |||||||||||| | |||||  ||||||||| ||| ||||   |||||||||||||    
T  38612688 tcccacgattttgtaaccgccagagcctggtgtaccattacaacggctctgcagatctccacctctata 38612620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 513
Target Start/End: Original strand, 21801716 - 21801911
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||||| |||||||| ||||||||| ||  ||||||||||||  | |||    
T  21801716 ttctggaccggccaaaaggatctttggcccatttacttaggcccaatactatctaaaacccaaacaccacgtttggaaaacttacttgcaacacactcct 21801815  T
Q  419 ttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
     ||   | | ||||||| |  |||| |   |||  | ||||||||| |||||||||||||||| |||||||||||||||  |||||||||||||||    
T  21801816 ctcctgcaaggggggtgtaaggagcgagcaagaccgattcaaacgaaccacaacgtctctctgcacgttcccgcaataagttctctggcggttaca 21801911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 317 - 581
Target Start/End: Original strand, 30764849 - 30765114
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||| ||||||||||| | || || ||||||| ||||| ||||||| |||  ||||  ||||  ||||||||||||  |||||||| |||| |||    
T  30764849 tgttctggatcggccaaaagggctttaggtccatttacttaggtccaatacaatcccaagcttaaactccacgtttggcaaatttacttgcgacataccc 30764948  T
Q  417 ctttcagaccagggg-gtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||     | ||||| |||||||||||||    || |||||||| ||| |||||| |||||| || || |||||||||| |  |||||||||||||||||    
T  30764949 cttcaccgcgaggggagtgcacagagcaagcaggactggttcaagcgaaccacaatgtctctttgcacattcccgcaattatttctctggcggttacact 30765048  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctct 581  Q
    ||||| |||||| || ||| | ||   ||||||| || |||||||||| |||| ||||||||||||    
T  30765049 tcccacgatttcgtacccgtcggacctaggtgtgccactacaacagctctgcagccctccacctct 30765114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 444 - 593
Target Start/End: Complemental strand, 18185827 - 18185678
Alignment:
Q  444 aaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtca 543  Q
    ||||||| |||||||||||| || |||||||||| |  | ||||||||||||||||| |  |||||||||||||||  |||||| |||||| |||||| |    
T  18185827 aaagagactggttcaaacgaaccccaacgtctctttccatgttcccgcaataaactcgcaagcggttacacttcccgcgatttcgtaaccgtcagagtaa 18185728  T
Q  544 ggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| | ||| ||| ||| |||| |||||||| | ||| |||||||||    
T  18185727 ggtgtgccgttaaaacggctctgcagccctccacatttattaatagggga 18185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 498 - 593
Target Start/End: Original strand, 28794078 - 28794173
Alignment:
Q  498 ctctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||||||||||||||||| |||||| |||||| ||||  || ||||| ||||||||| |||||||| ||   ||||| |||| ||||||||    
T  28794078 ctctctggcggttacacttcccacgatttcgtaaccgtcagacacacgtgtgccattacaacggctatgcagccactcacctttatatatagggga 28794173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 542 - 593
Target Start/End: Complemental strand, 22704001 - 22703950
Alignment:
Q  542 caggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||| ||||||||| ||| |||| ||||||||||||||||||| ||||    
T  22704001 caggtgtgccattacaacggctctgcagccctccacctctataaatatggga 22703950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 3e-74; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 3770591 - 3770314
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||  |||||||||||| |||||||||||| |||||||||||||  |||    
T  3770591 tgttctggaccggccaaaaggacctttggcccatttacttaggcccaatacaattcaaagcccaaacaccacgtttggcaaagttacttgcaacacaccc 3770492  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | |||||| ||||  |||| | ||||| |||||||||||| || ||||||||||||| ||||| |||||||||||||||| |||||||||||    
T  3770491 cttccactcaaggggggtgcatggagcgagagagactggttcaaacgaacctcaacgtctctctgcacgtttccgcaataaactctctagcggttacact 3770392  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    | ||| |||||  |||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  3770391 ttccacgattttgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 3770314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 23755687 - 23755964
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| |||||||||||||  |||||||||||| ||| |||||||||||| || |||||| || |||||||||||||  |||    
T  23755687 tgttctggaccggccaaaaggacctttggcccatttacctaggcccaatacaatccaaagcccaaacaccatgtttggtaaagttacttgcaacacaccc 23755786  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | |||||| ||||| |||| |||| || ||||||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  23755787 cttccaagcaaggggggtgcacggagcgaaagtgactggttcaaaagaaccacaacgtctctctgcacgttcccgcaataaactctatggcggttacact 23755886  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||||||| |||| |||||||| ||||||||| ||| | || || |||||||||||||||||||||    
T  23755887 tcccacgatttcgtaaccgctagagccaggtgtgccattacaacggctctacagccttccacctctataaatagggga 23755964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 312 - 593
Target Start/End: Complemental strand, 3105540 - 3105258
Alignment:
Q  312 atttgtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaaca 411  Q
    |||| |||||||||| |||||||||||| ||| | ||||||| |||||||||| || ||| |||||||||||| |||||||| |||  |||||||| |||    
T  3105540 atttttgttctggactggccaaaaggacctttagtccatttacttaggcccaacacaatccaaagcccaaacaccacgtttgacaacattacttgcgaca 3105441  T
Q  412 t-ccccctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggtt 510  Q
      |||||||||  || |||| ||||||||||| |  ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  3105440 caccccctttcccacaagggagtgcacagagcgagcgagaccggttcaaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggtt 3105341  T
Q  511 acacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||| ||||||||||||   ||||| ||||||||||||||||| ||| | ||| |||||||||||||||||| ||||    
T  3105340 acacttcccacgatttcataaccatgagagttaggtgtgtcattacaacggctctacaatcctccacctctataaatatggga 3105258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 41266065 - 41266341
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||  || | |||||||| ||||||||||||||||| |||  ||||||| || ||||||||| ||||||||||||| ||||    
T  41266065 tgttctggaccggtcaaaaggattttagacccatttacttaggcccaatacgatccaaaatccaaacaccatgtttggcaaagttacttgcaacaccccc 41266164  T
Q  417 c-tttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    | |||||| | | ||||||||| |||| || | || |||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  41266165 cctttcaggcaatggggtgcacggagcgaa-gtgactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctcgggcggttacact 41266263  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    || || ||| || |||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  41266264 tctcacgatatcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 41266341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 316 - 593
Target Start/End: Original strand, 26154850 - 26155128
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    |||||||||| | | ||||||||| |||| |||||||| ||||| ||||||  || |||||  |||||| |||||||||||| ||||||||| |||   |    
T  26154850 gtgttctggatcagtcaaaaggacttttgacccatttacttaggtccaatataatttaaagttcaaacaccacgtttggcaaagttacttgcgacacatc 26154949  T
Q  416 cctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||| || || |||||| ||||| |||| ||||||| | |||||||||| ||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  26154950 ccttccacacaaggggggtgcacggagcgaaagagattagttcaaacgaaccacaacatctctttgtacgttcccgcaataaacgctctggcggttacac 26155049  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| |||||| ||||| ||| || |||||||| ||||| ||| |||||||| ||||||||||||||||||||||||    
T  26155050 ttcccacgatttcgtaaccaccatagccaggtgtgccattataacggctatgcagccctccacctctataaatagggga 26155128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 316 - 593
Target Start/End: Original strand, 25133792 - 25134079
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    ||||||||||| |||||||| ||  |||| |||||||| ||||||||| ||| ||| |||||||||||| |||||||||||| ||||||||| |||  ||    
T  25133792 gtgttctggacgggccaaaaagatctttgacccatttacttaggcccattacaatccaaagcccaaacaccacgtttggcaaagttacttgcgacacacc 25133891  T
Q  416 cctttcagaccaggggg----------tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctgg 505  Q
    ||||||  |  ||||||          ||||| ||||||  |||| |||||||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  25133892 cctttcctaaaaggggggggtggggggtgcacggagcaagcgagactggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctctgg 25133991  T
Q  506 cggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||||| ||| |||||| |||||||||||| |||||||| || |||||| ||| |||| ||||||||||||||||||||||||    
T  25133992 cggttacacttaccacgatttcgtaaccgccagagccaggtgtgccactacaacggctctgcagccctccacctctataaatagggga 25134079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 358 - 593
Target Start/End: Original strand, 42534032 - 42534268
Alignment:
Q  358 ggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccaggggg-tgcacagagcaaaagagaatggtt 456  Q
    |||||||||| ||| |||||||||||| |||||||| |||  |||||||| |||  ||||||||  || |||||| |||||  ||| |  ||||   |||    
T  42534032 ggcccaatacaatccaaagcccaaacaccacgtttgtcaaccttacttgcgacactcccctttcccacaaggggggtgcacgtagcgagcgagacctgtt 42534131  T
Q  457 caaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattac 556  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||| ||||||    
T  42534132 caaacgagccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccagatgtgccattac 42534231  T
Q  557 aacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| ||| |||| ||||||||||||||||||||||||    
T  42534232 aacggctctgcagccctccacctctataaatagggga 42534268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 316 - 593
Target Start/End: Complemental strand, 27347500 - 27347223
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    |||||||||||||| ||||||||  ||||||||||||| ||| ||||||||| ||| |||||||||||||||||||||||||  ||||| || |||  ||    
T  27347500 gtgttctggaccggtcaaaaggatctttggcccatttacttaagcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacacc 27347401  T
Q  416 cctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||| ||    |||||||||||| | | ||||||| |||||||||||| || |||||||||| |  |||||||||||||||||||   ||| ||||||||    
T  27347400 ccttccatgagagggggtgcacataacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcataggcagttacact 27347301  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||| |||||| ||| || ||||||| ||||||||| ||| || | |||||||| |||||| ||||||||    
T  27347300 tcccatgatttcgtaaccgtcagtgttaggtgtgccattacaacggctttgtagccctccacgtctatacatagggga 27347223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 19093051 - 19092775
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||| ||| |||||||| |||||  ||||||| ||||||||||||  ||  |||||||||||| || |||||| ||  |||||||| |||   ||    
T  19093051 tgttctggatcggacaaaaggagatttgatccatttacttaggcccaatattattcaaagcccaaacaccatgtttggtaacattacttgcgacacatcc 19092952  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    |||    || ||||||||||| |||| ||  ||| | |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||    
T  19092951 cttctccacgagggggtgcacggagcgaacaagactagttcaaacgaaccacaacgtctctctgcacgttcccgcaataatctctctggcggttacactt 19092852  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||  | |||  |||||| |||||| |||||||||||||||| ||| |||| ||| ||||||||||| ||||||||    
T  19092851 cccacaagttcgaaaccgcgagagtctggtgtgtcattacaacggctctgcagccccccacctctatatatagggga 19092775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 454 - 593
Target Start/End: Complemental strand, 29568507 - 29568369
Alignment:
Q  454 gttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcat 553  Q
    ||||||||||||||||||||||||||  ||||||| |||||||||||||| |||||||||||||||| |||||| |||||||||||| |||||||  |||    
T  29568507 gttcaaacgagccacaacgtctctctacacgttcc-gcaataaactctctagcggttacacttcccacgatttcgtaaccgccagagccaggtgtaccat 29568409  T
Q  554 tacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| ||| || | |||||||||||||||||| |||||    
T  29568408 tacaacggctctgtagccctccacctctataaattgggga 29568369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 453 - 593
Target Start/End: Complemental strand, 23929991 - 23929851
Alignment:
Q  453 ggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtca 552  Q
    |||||||| || |||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||| |||| | |||||||||||| |||||||| ||    
T  23929991 ggttcaaatgaaccacaatgtctctctgcacgttcccacaataaactctccggcggttacacttcccacgattccgtaaccgccagagccaggtgtgcca 23929892  T
Q  553 ttacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| ||| |||| |||||||||||| || ||||||||    
T  23929891 ttacaacggctctgcagccctccacctctttatatagggga 23929851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 316 - 407
Target Start/End: Complemental strand, 23933011 - 23932920
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgc 407  Q
    ||||||| |||||||||||||||  ||||||||||||| ||||||| ||||| ||| |||||||||||| ||||| || |||  ||||||||    
T  23933011 gtgttctagaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacaccacgtctgacaacattacttgc 23932920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 317 - 367
Target Start/End: Original strand, 26159096 - 26159146
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatac 367  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||    
T  26159096 tgttctggaccggccaaaaggacttttggctcatttacttaggcccaatac 26159146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 2e-69; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 5931521 - 5931244
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| ||||| ||||||||| || ||||||||||||| ||||||||||||| ||| | | |||||||||| ||||||||||  |||||||  |||  |||    
T  5931521 tgttatggactggccaaaagtacctttggcccatttacttaggcccaatacaatccacaacccaaacatcgcgtttggcaaaattacttgtgacacaccc 5931422  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || || |||||| ||||| |||| | ||||| |||||||||||| |||||||||||||||  || |||||||||||||||||||||||||| ||||    
T  5931421 cttccacacaaggggggtgcacggagcgatagagactggttcaaacgaaccacaacgtctctctacacattcccgcaataaactctctggcggttgcact 5931322  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| ||||||||||||||||||  |||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  5931321 tcccacgatttcataaccgccagaaccaggtgtgtcattacaacggctctgcagccctccacctctataaatagggga 5931244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 315 - 593
Target Start/End: Original strand, 28067891 - 28068169
Alignment:
Q  315 tgtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaa-gcccaaacatcacgtttggcaaggttacttgcaacatc 413  Q
    ||||||||||||||||||||||||  |||| |||| ||| ||| ||||||||| ||| ||| || ||| || ||||||||||||  |||||||||||| |    
T  28067891 tgtgttctggaccggccaaaaggatctttgacccacttacttacgcccaatacaatccaaaagcacaagcaccacgtttggcaaacttacttgcaacacc 28067990  T
Q  414 cccctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
     || |||| | | ||||||||||| |||| |  |||| ||||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  28067991 tccttttccg-caagggggtgcacggagcgagcgagactggttcaaacgagcctcaacgtctctctgcacgttcctgcaataaactctccggcggttaca 28068089  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| |||||| |||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  28068090 cttcccacgatttcgtaaccgccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 28068169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 322 - 593
Target Start/End: Original strand, 33622365 - 33622639
Alignment:
Q  322 tggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttc 421  Q
    |||||||||||||||||  |||| |||||||| ||| ||||||||| ||| ||||||||||||||| |||||||||  ||||| || |||  |||||| |    
T  33622365 tggaccggccaaaaggatctttgacccatttacttaagcccaatacaatccaaagcccaaacatcatgtttggcaaaattactcgcgacacaccccttcc 33622464  T
Q  422 agaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccat 521  Q
    |    |||||||||||||| | ||||||| ||||| |||||| || |||||||||| | |||||||| ||||||||||| | |||||||||||||||||     
T  33622465 acgtgagggggtgcacagaacgaaagagactggtttaaacgaaccccaacgtctctttctacgttccagcaataaactcacaggcggttacacttcccag 33622564  T
Q  522 gatttcata---accgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| ||   |||| |||||| |||||||| |||||||| ||| |||| ||||||||||||||||||||||||    
T  33622565 gatttcgtaaccaccgtcagagtaaggtgtgtaattacaacggctctgcagccctccacctctataaatagggga 33622639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 315 - 593
Target Start/End: Original strand, 15620059 - 15620337
Alignment:
Q  315 tgtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcc 414  Q
    |||||| |||| ||| |||||||| |||||||| ||||||| ||||| ||||| ||| |||| ||||||  |||||||| |||  |||||||||||   |    
T  15620059 tgtgttatggatcgggcaaaaggatatttggcctatttattcaggcctaatacaatccaaagtccaaacgccacgtttgacaaacttacttgcaacgcac 15620158  T
Q  415 ccctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    ||||| |   | |||||||| || |||| |  ||||  |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  15620159 cccttccttgcaagggggtgtacggagcgagcgagacgggttcaaacgagccacaacgtctctctgcacgttcccacaataaactctctggcggttacac 15620258  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||  ||||| |||||| ||||| || ||||| ||||||||||||| | || |||| |||||||||||||||||||    
T  15620259 ttcccacaatttcgtaaccgtcagagccaagtgtgccattacaacagctctacagcccttcacctctataaatagggga 15620337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 23495678 - 23495402
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| |||||||| ||||||||  |||| |||||||| |||||| |||||  ||| |||||||||||| ||||||| ||||  ||||| || |||  |||    
T  23495678 tgttttggaccgggcaaaaggatctttgacccatttacttaggctcaatatcatccaaagcccaaacaccacgttttgcaaaattactcgcgacacaccc 23495579  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| ||  | ||||||||||| || | |||||||  ||||||||||| || |||||||||| |  ||||||||||||||||||| | | |||||||||||    
T  23495578 cttccacgcaagggggtgcacggaacgaaagagaccggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacagacggttacactt 23495479  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  23495478 cccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 23495402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 20899465 - 20899742
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||| ||||||||||  ||||||||||| | ||| ||||| ||| ||| |||||||||||| ||||||||| ||  ||||| || |||  |||    
T  20899465 tgttctggaccagccaaaaggatctttggcccattcacttaagcccagtaccatccaaagcccaaacaccacgtttggaaaaattactcgcgacacaccc 20899564  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | | |||||||||| || | ||||||| |||||||||||| || |||||||||| |  ||||||||||||||||||| | ||||||||||||    
T  20899565 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcggttacact 20899664  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| |||||| |||||| ||||||| |||||||||   | |||| |||||||||| |||||||||||||    
T  20899665 tcccacgatttcgtaaccgtcagagttaggtgtgccattacaacgaatctgcagccctccacctttataaatagggga 20899742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 428 - 593
Target Start/End: Complemental strand, 42792700 - 42792535
Alignment:
Q  428 gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttc 527  Q
    |||||||||||||||||  ||||  |||||||||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||| ||||||    
T  42792700 gggggtgcacagagcaagcgagaccggttcaaacgagtcacaacgtatctctgcacgttcccgcaataaactctctagcggttacacttcccacgatttc 42792601  T
Q  528 ataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     |||||||||||| |||||||| || |||||| ||| |||| |||||||||||||||| |||||||    
T  42792600 gtaaccgccagagccaggtgtgccactacaactgctctgcagccctccacctctataactagggga 42792535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 327 - 587
Target Start/End: Original strand, 41037524 - 41037785
Alignment:
Q  327 cggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagacc 426  Q
    ||||||||||||| | || |||||||| |||| | |||||| ||| ||||||||||||  ||| |||||||  ||||||||||||  || ||||| | |     
T  41037524 cggccaaaaggacctatgacccatttacttagactcaatacaatccaaagcccaaacactacggttggcaaacttacttgcaacacaccactttccggca 41037623  T
Q  427 aggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatt 525  Q
    |||||| |||||  |||||  |||| ||||||||| || | | ||| ||| |||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  41037624 aggggggtgcacgaagcaagcgagactggttcaaatgaacgataacatctgtctgcacgttcacgcaataaactctctggcggttacacttcccacgatt 41037723  T
Q  526 tcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaat 587  Q
    || |||||||||||| |||||||| ||||||||| |||  ||| ||||||||||||||||||    
T  41037724 tcgtaaccgccagagccaggtgtgccattacaacggctccgcagccctccacctctataaat 41037785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 373 - 593
Target Start/End: Original strand, 5590622 - 5590843
Alignment:
Q  373 aaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccagg-gggtgcacagagcaaaagagaatggttcaaacgagccacaac 471  Q
    |||||||||||| ||||||||||||  ||||| || |||  |||||||||  | ||| ||||||||||| | ||||||| |||||||||||| || ||||    
T  5590622 aaagcccaaacaccacgtttggcaaaattactcgcgacagacccctttcacgcgaggagggtgcacagaacgaaagagactggttcaaacgaaccccaac 5590721  T
Q  472 gtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaacc 571  Q
    |||||| |  || |||||||||||||||| | |||||||||||||||||  ||||| |||||| |||||| ||||||| ||||||||| ||| |||  ||    
T  5590722 gtctctttccacattcccgcaataaactcgcaggcggttacacttcccacaatttcgtaaccgtcagagtaaggtgtgccattacaacggctctgctgcc 5590821  T
Q  572 ctccacctctataaatagggga 593  Q
    ||||||||||||||||||||||    
T  5590822 ctccacctctataaatagggga 5590843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 36712519 - 36712795
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||| ||| ||| |||||||  |||| |||||||| |||||||||||||  || |||||| ||||| ||||||||||||  ||||  || |||  |||    
T  36712519 tgttctagactggctaaaaggatctttgacccatttacttaggcccaatacactccaaagcctaaacaccacgtttggcaaaattacccgcgacacaccc 36712618  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| ||  | ||||||||||| || | ||||||| | |||||||||| || |||||||||| |  |||||| ||||||||| || | || ||||||||||    
T  36712619 cttccacgctagggggtgcacggaacgaaagagactagttcaaacgaaccccaacgtctctttccacgttctcgcaataaaatcgcaggtggttacactt 36712718  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     ||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  36712719 tccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 36712795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 317 - 540
Target Start/End: Complemental strand, 8244846 - 8244623
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||| ||||||||| ||||||  ||||| ||| |||| | ||||| | | ||||||   |||||||||||||  |||    
T  8244846 tgttctggaccggccaaaaggaattttagcccatttacttaggcttaatacaatccaaagtctaaacaccgcatttggctgagttacttgcaacacaccc 8244747  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| ||  | ||||||||||| |||| ||||||| |||||||||||| ||||||||||||| || |||||||| ||||||||||||| ||| ||||||||    
T  8244746 cttccacgcaagggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctttgcacgttcccccaataaactctctagcgattacactt 8244647  T
Q  517 cccatgatttcataaccgccagag 540  Q
     ||| |||||| ||||||||||||    
T  8244646 tccacgatttcgtaaccgccagag 8244623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 454 - 593
Target Start/End: Original strand, 22922645 - 22922784
Alignment:
Q  454 gttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcat 553  Q
    |||||||||| ||||||| |||||||||| ||| | ||||||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||     
T  22922645 gttcaaacgaaccacaacctctctctgtatgtttcagcaataaactctctggcggttacacttcccacgatttcgtaaccgctagagccaggtgtgtcac 22922744  T
Q  554 tacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| ||| || | ||||||||||||||||||||||||    
T  22922745 tacaacggctctgtagccctccacctctataaatagggga 22922784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 456 - 593
Target Start/End: Original strand, 22922050 - 22922187
Alignment:
Q  456 tcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcatta 555  Q
    |||||||| |||||||||||||||||||||| | | |||||||| |||||||||||||||||||| |||||  ||||| |||||| ||||||||||| ||    
T  22922050 tcaaacgaaccacaacgtctctctgtacgtttcaggaataaactttctggcggttacacttcccacgattttgtaaccaccagagccaggtgtgtcacta 22922149  T
Q  556 caacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| ||| || | ||||||||||||||||||||||||    
T  22922150 caacggctctgtagccctccacctctataaatagggga 22922187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 341 - 558
Target Start/End: Original strand, 19329817 - 19330035
Alignment:
Q  341 tttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccaggggg-tgcacag 439  Q
    ||||||||||||| ||||||||||||| ||  |||||||||| | ||||||||||||  |||||||| | |   ||||| |   | |||||| ||||| |    
T  19329817 tttggcccatttacttaggcccaatacaattcaaagcccaaataccacgtttggcaacattacttgcgagacatcccttccctgcgaggggggtgcacgg 19329916  T
Q  440 agcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccaga 539  Q
    || ||   |||  |||||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  19329917 agaaagcaagaccggttcaaacgagccacaacgttactctgcatgttcccgcaataatctctctggcggttacacttcccacgatttcgtaaccgccaga 19330016  T
Q  540 gtcaggtgtgtcattacaa 558  Q
    |   |||||| ||||||||    
T  19330017 gcttggtgtgccattacaa 19330035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 317 - 516
Target Start/End: Complemental strand, 13538060 - 13537860
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||  |||||| | |||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||||||  ||||| || |||  |||    
T  13538060 tgttctggaccgatcaaaagaatatttggtccatttacttaggcccaataccatccaaagcccaaacatcacgtttggcaaaattactcgcgacacaccc 13537961  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | | ||||||| || || | ||||||| ||||||||| || || |||||||||| |  ||||||||||||||||||| | | ||||||||||    
T  13537960 cttccacgcgaggggggtgtacggaacgaaagagactggttcaaatgaaccccaacgtctctttccacgttcccgcaataaactcacagccggttacact 13537861  T
Q  516 t 516  Q
    |    
T  13537860 t 13537860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 477 - 593
Target Start/End: Complemental strand, 38608437 - 38608321
Alignment:
Q  477 tctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctcca 576  Q
    |||| |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||| |||||||| |   ||||| ||| || |  ||||||    
T  38608437 tctgcacgttcccgcaataaactctttggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcctccacaacggctctgtagacctcca 38608338  T
Q  577 cctctataaatagggga 593  Q
    |||||||||||||||||    
T  38608337 cctctataaatagggga 38608321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 496
Target Start/End: Complemental strand, 24095523 - 24095343
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  |||||||||| || ||||||||||||| ||| |||||||||| | |||||||||||| |||||||||  ||  |||    
T  24095523 tgttctggaccggccaaaaggagttttggcccatctacttaggcccaatacaatccaaagcccaaataccacgtttggcaacgttacttgcggcacaccc 24095424  T
Q  417 ctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataa 496  Q
    | | |   | |||||| ||||| ||||||  ||||  ||||||||| | || |||||||||| || |||||||||||||||    
T  24095423 cgtccgcgcgagggggatgcacggagcaagcgagaccggttcaaacaaaccccaacgtctctttgcacgttcccgcaataa 24095343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 317 - 527
Target Start/End: Complemental strand, 22510312 - 22510101
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||  | |||||  |||||| ||||||||  ||  ||||  || |||  |||    
T  22510312 tgttctggaccggccaaaaggatctttggcccatttacttaggcccaatacactataaagttcaaacaccacgtttgataaaattacccgcgacacaccc 22510213  T
Q  417 ctttcagaccagg-gggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | ||| |||||||| || | ||||||| ||||| |||||| |  |||||||||| |  | ||||||||||||||||| | ||||||||||||    
T  22510212 cttccacgcgaggtgggtgcacggaacgaaagagactggttaaaacgaactccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 22510113  T
Q  516 tcccatgatttc 527  Q
    ||||| ||||||    
T  22510112 tcccacgatttc 22510101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 132; Significance: 3e-68; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 391791 - 391513
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||| |||||||||| | ||| ||||||| ||||| ||||||| ||| ||| |||||||| |||| |||||||  ||||||||||||  |||    
T  391791 tgttctggaccgaccaaaaggacctgtggtccatttacttaggtccaatacaatccaaaccccaaacaccacggttggcaaacttacttgcaacacaccc 391692  T
Q  417 ctttcagaccaggggg--tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||||   | ||||||  ||||| |||| |  |||| | |||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  391691 ctttcccgcaagggggggtgcacggagcgagcgagactagttcaaacgaaccacaacgtctctctgcaggttcccgcaataaactctctggcggttacac 391592  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| ||||| |||||||||||| |||||||| ||||||||| ||| |||||||||||||||||||||||||||||    
T  391591 ttcccataatttcgtaaccgccagagccaggtgtgccattacaacggctctgcaaccctccacctctataaatagggga 391513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 381092 - 380815
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| |||||||||||||||||||| ||||||||||| ||| ||||||||| ||| |||||||||||| || | |||||||  ||||||||| ||  |||    
T  381092 tgttatggaccggccaaaaggacatgtggcccatttacttacgcccaatacaatccaaagcccaaacaccatggttggcaaacttacttgcaccacaccc 380993  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||||   | | |||||||||| |||| |  |||| |||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||||    
T  380992 ctttcctgcaaggggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaagtctctggcggttacact 380893  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    || ||  ||||| ||||| |||||| |||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  380892 tctcacaatttcgtaacctccagagccaggtgtgccattacaacggctctgcagccctccacctctataaatagggga 380815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 29926 - 30203
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||| || ||| |||||||||||| |||||||||||| ||||| |||||||  |||    
T  29926 tgttctggaccggccaaaaggacctttggcccatttaattaggcccaacacaatccaaagcccaaacagcacgtttggcaaagttacatgcaacacaccc 30025  T
Q  417 ctttcagaccaggg-ggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | |||| ||||||| |||| ||||||| |||||||||||| |||||||||||||||  |||||||||||||||| ||||||| |||||||||    
T  30026 cttccatgcaagggaggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctacacgttcccgcaataaaatctctggaggttacact 30125  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||  ||||| ||||| |||||| |||||||  | ||||||  ||| |||| ||||||||||||||||||| ||||    
T  30126 tcccacaatttcgtaaccaccagagccaggtgttccgttacaatggctctgcagccctccacctctataaatacggga 30203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 16185 - 16461
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||| |||||||||||| ||||| ||||||| ||||||||||||| | | ||||||||||||  | |||||| || ||||| ||| |||  |||    
T  16185 tgttctggactggccaaaaggacctttggtccatttacttaggcccaatacaacccaaagcccaaacactatgtttggaaaagttacatgcgacacaccc 16284  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    |||||  || ||||||||||| |||| || |||| |||||||||||| ||||||| |||||||| |||||||||||||||||||||||| ||||||||||    
T  16285 ctttcccacaagggggtgcacggagcgaatgagactggttcaaacgaaccacaacatctctctgcacgttcccgcaataaactctctggtggttacactt 16384  T
Q  517 cccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| |||||  |||||||||||| |||||||  ||||||||  ||| |||| ||||||||||||||||||||||||    
T  16385 cccacgattttgtaaccgccagagccaggtgtaccattacaatggctctgcagccctccacctctataaatagggga 16461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 126; Significance: 1e-64; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 316 - 576
Target Start/End: Complemental strand, 19790607 - 19790346
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    ||||| ||||| |||||||||||   |||||||||||| ||||||||||||| ||| ||| |||||||| |  |||||| || ||||||||| |||  ||    
T  19790607 gtgttatggactggccaaaaggatcattggcccatttacttaggcccaataccatccaaaacccaaacaccgtgtttggtaaagttacttgcgacacgcc 19790508  T
Q  416 cctttcagaccaggggg-tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||| ||||| |||||| |||||||||| ||||||| |||||||||||| |||||||||||||||| |||||||| |||||||||||||| |||||||||    
T  19790507 ccttccagacaaggggggtgcacagagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccacaataaactctctgacggttacac 19790408  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctcca 576  Q
    |||||| |||||| |||||| |||||||||||||| ||||||||| ||| |||| |||||||    
T  19790407 ttcccacgatttcgtaaccgtcagagtcaggtgtgccattacaacggctctgcagccctcca 19790346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 319 - 593
Target Start/End: Complemental strand, 22915379 - 22915106
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacat-ccccc 417  Q
    |||| |||||| |||||||||||||||| |||||| ||||||||||||| |||| |||| |||||| |||||||| |||| ||||||||||||  |||||    
T  22915379 ttcttgaccggtcaaaaggacatttggctcatttacttaggcccaatacaatctgaagcgcaaacaccacgtttgacaagtttacttgcaacacaccccc 22915280  T
Q  418 tttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttc 517  Q
    || | |  || ||||||||| |||| |  |||| | ||||||||||  ||||||||||||||  |||||||||||||||||||||| || ||||||||||    
T  22915279 ttcccg--caaggggtgcacggagcgagcgagactagttcaaacgaatcacaacgtctctcttcacgttcccgcaataaactctctagctgttacacttc 22915182  T
Q  518 ccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| ||||||||||||||| ||| || ||||  ||||||||| ||| |||| | |||||||| |||||||||||||    
T  22915181 ccacgatttcataaccgccggagccaagtgtaccattacaacggctctgcagctctccacctttataaatagggga 22915106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 453 - 593
Target Start/End: Original strand, 16853014 - 16853154
Alignment:
Q  453 ggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtca 552  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||| ||    
T  16853014 ggttcaaacaagccacaacgtctctctgcacgttaccgcaataaactctctggcggttacacttcccacgatttcgtaaccgccagagccaggtgtgcca 16853113  T
Q  553 ttacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||  | |||| ||||||||||||||||||||||||    
T  16853114 ttacaacatatttgcagccctccacctctataaatagggga 16853154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 346 - 589
Target Start/End: Complemental strand, 16915008 - 16914764
Alignment:
Q  346 cccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacat-ccccctttcagaccagggggtgcacagagcaa 444  Q
    |||||||| ||||||||||||| |||  |  |||||||| ||||||||| ||  |||||||| |||| |||||| || |    ||||||| || ||||||    
T  16915008 cccatttacttaggcccaatacaatcccatacccaaacaccacgtttggaaaacttacttgcgacataccccctctccgtgaggggggtgaacggagcaa 16914909  T
Q  445 aagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcag 544  Q
     |  ||  |||||||||||||| |||||||||| || ||||||||||||| |  |||||   |||||||| ||||| |||||| |||||||||||   |     
T  16914908 gaaggaccggttcaaacgagccgcaacgtctctttgcacgttcccgcaattatttctctactggttacacctcccacgatttcgtaaccgccagaccgat 16914809  T
Q  545 gtgtgtcattacaacagctatgcaaccctccacctctataaatag 589  Q
     |||| ||||||||  ||| |||| ||||||||||||||| ||||    
T  16914808 ctgtgccattacaatggctctgcagccctccacctctatatatag 16914764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 454 - 568
Target Start/End: Complemental strand, 44635940 - 44635826
Alignment:
Q  454 gttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcat 553  Q
    |||||||||| | |||||||||||  | |||||||||| |    ||||||||||||||||||||||| |||||| |||||| | || ||| ||||| |||    
T  44635940 gttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacacttcccacgatttcgtaaccgacggactcacgtgtgccat 44635841  T
Q  554 tacaacagctatgca 568  Q
    |||||| ||| ||||    
T  44635840 tacaacggctctgca 44635826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 317 - 520
Target Start/End: Original strand, 13016433 - 13016636
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| |||||||| ||||| ||||||  ||||||||| ||||||||| ||| |    ||||||||| |  |||||||||||  |||  |||||||  |||    
T  13016433 tgttatggaccggtcaaaatgacattcagcccatttacttaggcccagtacaaatccaagcccaaatacaacgtttggcaacattatgtgcaacacaccc 13016532  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacactt 516  Q
    ||| |  || | |||||||||| |||||  ||||   |||||||||| | |||||||||||  | |||||||||| |    |||||||||||||||||||    
T  13016533 cttccccacaaaggggtgcacatagcaagcgagatcagttcaaacgaactacaacgtctcttcgcacgttcccgcgaatctctctctggcggttacactt 13016632  T
Q  517 ccca 520  Q
    ||||    
T  13016633 ccca 13016636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 118; Significance: 6e-60; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 909 - 1186
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||| ||||||| ||| |||||||||||| ||||||| ||||  ||||||||| ||| |||    
T  909 tgttctggaccggtcaaaaggacctttggcccatttacttaggtccaatacaatccaaagcccaaacaccacgtttagcaaacttacttgcagcataccc 1008  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||    || | |||||||||| |||| |  |||| |||||||||||| ||||||||| |||||| | ||||| |||||||||||| |||||||||||||    
T  1009 cttctccacgaagggggtgcacggagcgagcgagactggttcaaacgaaccacaacgtttctctgcatgttcctgcaataaactctatggcggttacact 1108  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||| ||| |||| |||||||  ||||||||| |||||| | ||||||||||||||||||||||||    
T  1109 tcccacgatttcgtaatcgctagagccaggtgttccattacaacggctatgtagccctccacctctataaatagggga 1186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 114; Significance: 2e-57; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 69004 - 68727
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||| ||||||||||||||  ||||||||||||| ||||||||||||| ||  |||||||| ||  ||||||| ||||  |||||||| |||  |||    
T  69004 tgttctgaaccggccaaaaggatctttggcccatttacttaggcccaatacaattcaaagcccagactccacgttttgcaacattacttgcgacacaccc 68905  T
Q  417 ctt-tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || |    |||||||||| ||||||  |||| | ||||||||||||||||||||||||    |||||||||||||||||||||| |||||||||||    
T  68904 cttctctgcgaggggggtgcacggagcaaccgagactagttcaaacgagccacaacgtctcttcccacgttcccgcaataaactctctagcggttacact 68805  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||||||||| ||  ||||||||||||||||| ||| |||| ||||||||||||||||||||||||    
T  68804 tcccacgatttcgtaaccgccaaagcaaggtgtgtcattacaacggctttgcagccctccacctctataaatagggga 68727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 447 - 593
Target Start/End: Complemental strand, 75045 - 74899
Alignment:
Q  447 gagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggt 546  Q
    |||| |||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||    
T  75045 gagactggttcaaacgagccacaacgtgtctccgcacgttcccgcaataaactctctggcggttacacttccgacgatttcataactgccagagccaggt 74946  T
Q  547 gtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||| ||||||||| ||| | || ||||||||||||||||||||||||    
T  74945 gtgccattacaacggctctacagccctccacctctataaatagggga 74899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 110; Significance: 4e-55; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 321 - 593
Target Start/End: Original strand, 151164 - 151436
Alignment:
Q  321 ctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccccttt 420  Q
    ||||||||||||||||||  ||||||||||||| ||||||| ||||| ||| ||||||||||||  |||||||||||  ||||||||| ||| ||||||     
T  151164 ctggaccggccaaaaggatctttggcccatttacttaggcctaatacaatccaaagcccaaacactacgtttggcaaacttacttgcagcataccccttc 151263  T
Q  421 cagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttccc 519  Q
    |  || | |||||||||| |||| |  ||||  | ||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||    
T  151264 cccacaaagggggtgcacggagcgagcgagaccgattcaaacgaaccacaacgtctctctgtacgttcctgcaataaactctctggc-gtttcacttccc 151362  T
Q  520 atgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    | |||||| ||||||| |||| ||||| |  || |||||| ||| |||| ||||||||||||||||||||||||    
T  151363 acgatttcgtaaccgctagagccaggtcttccactacaacggctctgcagccctccacctctataaatagggga 151436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 108; Significance: 6e-54; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 399 - 593
Target Start/End: Complemental strand, 1857 - 1662
Alignment:
Q  399 gttacttgcaacatccccctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaa- 497  Q
    |||||||||||||| |||||| || || ||||||||| | |||| ||||||| |||||||||||| |||||||||||||||| ||||||||||||||||     
T  1857 gttacttgcaacataccccttccacacaagggggtgcccggagcgaaagagattggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaaa 1758  T
Q  498 ctctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||||||||||||||||||| |||||| |||||||||||| || || || ||||||||| ||| |||| || |||||||||||||||||||||    
T  1757 ctctctggcggttacacttcccacgatttcgtaaccgccagagccaagtatgccattacaacggctctgcagccatccacctctataaatagggga 1662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 495 - 593
Target Start/End: Complemental strand, 15517 - 15419
Alignment:
Q  495 aaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||||||||||||||||| |||||  |||||||||||||||||  || |||| |||| ||| |||| ||||||||||||||||||||||||    
T  15517 aaactctctggcggttacacttcccacgatttagtaaccgccagagtcaggcatgccattgcaacggctctgcagccctccacctctataaatagggga 15419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 344 - 419
Target Start/End: Complemental strand, 15603 - 15528
Alignment:
Q  344 ggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccctt 419  Q
    |||||||||| ||| ||||||||| ||   |||| |||||| | |||||||||| |||||||||||||| ||||||    
T  15603 ggcccatttacttatgcccaatacaataccaagctcaaacaacgcgtttggcaaagttacttgcaacatacccctt 15528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 106; Significance: 9e-53; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 428 - 593
Target Start/End: Original strand, 47396 - 47561
Alignment:
Q  428 gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttc 527  Q
    |||||||||| |||| ||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||||     
T  47396 gggggtgcacggagcgaaagagactggttcaaacgaaccacaacgtctctctgcacgttcccgcaataaactctctggcggttacacttcccacaatttt 47495  T
Q  528 ataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
     |||||||||||| || ||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  47496 gtaaccgccagagccaagtgtgccattacaacggctctgcagccctccacctctataaatagggga 47561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 407
Target Start/End: Original strand, 56229 - 56317
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgc 407  Q
    |||||||| | | |||||||| ||||||||||||| ||||||||||||| ||| |||||||||||| |||||||||| | |||||||||    
T  56229 ttctggactgacaaaaaggacctttggcccatttacttaggcccaatacaatccaaagcccaaacaccacgtttggcgaagttacttgc 56317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 4065 - 4342
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||||||||||||| ||||||| |||||| ||||| | ||||| ||| |||| ||||||| ||||||||||||  ||||||||| ||| |||    
T  4065 tgttctggaccggccaaaaggatatttggctcatttacttaggtcaaatacaatccaaagtccaaacaccacgtttggcaaacttacttgcagcataccc 4164  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    |||    || | |||||| ||| |||| |  | ||  ||||||||||| ||||||||||| |||| |||||| ||||||||||||||| || |||||||     
T  4165 cttctccacgaagggggttcacggagcgagcgggaccggttcaaacgaaccacaacgtctatctgcacgttctcgcaataaactctctcgcagttacaca 4264  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| |||||| ||||| |||||| |||||||| || |||||| ||| |||| ||||||||||||||||||||||||    
T  4265 tcccacgatttcgtaaccaccagagccaggtgtgccactacaacggctctgcagccctccacctctataaatagggga 4342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 100; Significance: 4e-49; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 319 - 589
Target Start/End: Complemental strand, 243002 - 242731
Alignment:
Q  319 ttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccccct 418  Q
    ||||| ||||||||||||||| |||| |||||||| ||||||||||||| |||||||||||||||| || |||||||||  |||||||| |||  |||||    
T  243002 ttctgtaccggccaaaaggacctttgtcccatttacttaggcccaatacaatctaaagcccaaacaccaagtttggcaacattacttgcgacacacccct 242903  T
Q  419 ttcagaccagg-gggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttc 517  Q
    | |     ||| |||||||| |||| |   |||  ||||||||||| ||||||||||||| || |||||||||||||||||||| |||| ||||||||||    
T  242902 tccccgataggcgggtgcacggagcgagcaagaccggttcaaacgaaccacaacgtctctttgcacgttcccgcaataaactctttggcagttacacttc 242803  T
Q  518 ccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatag 589  Q
    ||| |||| | ||||||| |||| |||||||| ||||||||| ||| |||  ||||||||||||||| ||||    
T  242802 ccacgattacgtaaccgcaagagccaggtgtgccattacaacggctctgccgccctccacctctatatatag 242731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 316 - 593
Target Start/End: Complemental strand, 253645 - 253367
Alignment:
Q  316 gtgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatccc 415  Q
    ||||| ||||| ||||||||| || ||||||||||||  ||||||||||||| ||| ||| |||||||| ||||||||||||  |||| ||| |||  ||    
T  253645 gtgttttggacaggccaaaagaacctttggcccattttcttaggcccaatacaatccaaatcccaaacaccacgtttggcaacattacgtgcgacacacc 253546  T
Q  416 cctttcagaccagggg-gtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    |||| |     ||||| |||||| |||      |||  |||||||| || ||||||| |||||||| ||||||||||||||||||||||||| |||||||    
T  253545 ccttccccgagaggggagtgcacggagagtgcaagaccggttcaaatgaaccacaacatctctctgcacgttcccgcaataaactctctggcagttacac 253446  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||| |||||| |||||||||||| |||||||| |||||||||  || |||| || ||||||| |||| ||||||||    
T  253445 ttcccacgatttcgtaaccgccagagccaggtgtgccattacaacgactttgcagccgtccacctttatatatagggga 253367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0989 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 373 - 591
Target Start/End: Original strand, 1448 - 1665
Alignment:
Q  373 aaagcccaaacatcacgtttggcaaggttacttgcaacatccccctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacg 472  Q
    |||||||||||| |||||||||| | ||||||||| |||   ||||| |  | || ||||||||| |||| ||||||| |||||||||||| |||||||     
T  1448 aaagcccaaacaccacgtttggcgaagttacttgcgacacatcccttcccca-caaggggtgcacggagcgaaagagactggttcaaacgaaccacaaca 1546  T
Q  473 tctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccc 572  Q
    |||||||  |||||||||||||||||||||||||||||||||||| || ||||| ||||| || |||| |||||||| ||||||||||||| | || ||     
T  1547 tctctctacacgttcccgcaataaactctctggcggttacacttctcacgattttataactgctagagccaggtgtgccattacaacagctctacagccg 1646  T
Q  573 tccacctctataaataggg 591  Q
    |||||||||||||||||||    
T  1647 tccacctctataaataggg 1665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 95; Significance: 3e-46; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 317 - 593
Target Start/End: Complemental strand, 12651 - 12377
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||| ||||| ||  |||||||||||| ||||||| ||||  |||||||| |||  |||    
T  12651 tgttctggaccggccaaaaggagctttggcccatttacttaggcctaatacaattcaaagcccaaacaccacgttttgcaacattacttgcgacacaccc 12552  T
Q  417 ctt-tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
     || || | | ||||| |||||||||| ||  |||  |||| ||| |||||||||||||| |  | ||||||||||||||| |||||| |||||||||||    
T  12551 attctccg-cgaggggatgcacagagcgaacaagaccggtttaaatgagccacaacgtctgt--gcacgttcccgcaataatctctctagcggttacact 12455  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||  |||||||||||| | |||||| ||||||||| ||| |||| |||| |||||||||| ||||||||    
T  12454 tcccatgattttgtaaccgccagagcctggtgtgccattacaacggctctgcagcccttcacctctatatatagggga 12377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 317 - 589
Target Start/End: Original strand, 10741 - 11014
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||| ||||||||||||  ||||||||||| | ||||||||||||| ||| |||||||||||| ||||||||||||  ||||| || |||  |||    
T  10741 tgttctggatcggccaaaaggatctttggcccattcacttaggcccaataccatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccc 10840  T
Q  417 ctttcagaccagggg-gtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| ||  | ||||| |||||  || | |||||||  |||||||| ||  | |||||||||| |  | ||||||||||||||||| | ||||||||||||    
T  10841 cttccatgcgaggggagtgcaaggaacgaaagagaccggttcaaaagaaacccaacgtctctttccatgttcccgcaataaactcacaggcggttacact 10940  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatag 589  Q
    |||||||||||| |||||| |||||| ||||||| ||||||||| ||| | || |||||||||| |||||||||    
T  10941 tcccatgatttcgtaaccgtcagagttaggtgtgccattacaacggctctacagccctccacctttataaatag 11014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 7218 - 7495
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| ||||||||| |||||||  ||||||||||||||||| | ||||||  ||| |||||||||||| || |||||||||  ||||| || |||  |||    
T  7218 tgttttggaccggctaaaaggatctttggcccatttatttatgtccaatatcatccaaagcccaaacaccaagtttggcaaaattactcgcgacacaccc 7317  T
Q  417 ctttcagacca--gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacac 514  Q
    | | || || |  |||||||||| || | ||||||| |||||||||||| || |||||||||| |  ||||||||||||||||||| | ||| |||||||    
T  7318 cctccacacgagggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactcacaggcagttacac 7417  T
Q  515 ttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||| | |||||| ||| || |||||| ||||||| ||||||||| ||| |||| ||||||||||||||||||||||||    
T  7418 ttccaacgatttcgtaa-cgtcagagtaaggtgtgccattacaacggctttgcagccctccacctctataaatagggga 7495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 54473 - 54749
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| |||| ||||||||  |  ||||||||||   ||||||||||||  ||||| |  |||  |||    
T  54473 tgttctggaccggccaaaaggatctttggcccatttacttagacccaatacactacaaagcccaaaatccacgtttggcaaaattactcgagacacaccc 54572  T
Q  417 ctttcagaccagggggt-gcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||  ||  | ||||||  |||| || | || |||| ||||||||||||  | ||||||||||||  ||||||||||||||||||| | || |||||||||    
T  54573 ctc-cacgcgaggggggcgcacggaacgaaggagactggttcaaacgaaacccaacgtctctctccacgttcccgcaataaactcacaggtggttacact 54671  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||||||| |||||| |||||| ||||||  ||||||||| |||||||| ||||||||||||||||||||||||    
T  54672 tcccatgatttcgtaaccgtcagagtaaggtgtaccattacaacggctatgcagccctccacctctataaatagggga 54749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 78; Significance: 5e-36; HSPs: 3)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 321 - 593
Target Start/End: Complemental strand, 15204 - 14925
Alignment:
Q  321 ctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccccttt 420  Q
    ||||||||||||||||||  ||||||||||| | ||||||||| ||| ||| |||||||||||| ||||||||||||  ||||| || |||  ||||||     
T  15204 ctggaccggccaaaaggatctttggcccattcacttaggcccagtactatccaaagcccaaacaccacgtttggcaaaattactcgcgacacaccccttc 15105  T
Q  421 cagaccaggggg-------tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
    ||    ||||||       ||||| || | |||||||  ||||||||||| || || ||||||| |  ||||||||||||||||||| | ||| ||||||    
T  15104 cacgtgaggggggggggggtgcacggaacgaaagagatcggttcaaacgaaccccagcgtctctttccacgttcccgcaataaactcacaggctgttaca 15005  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| |||||| |||||| |||||| ||||||| ||||||||| ||| |||  || ||||||| |||||||||||||    
T  15004 cttcccacgatttcgtaaccgtcagagttaggtgtgccattacaacggctctgcggccatccacctttataaatagggga 14925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 317 - 500
Target Start/End: Complemental strand, 17384 - 17200
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||||||||||||||||||| |  ||||||||||| | ||||||||| ||| ||| ||| |||||||| ||||||||||||  ||||| |  |||  |||    
T  17384 tgttctggaccggccaaaagaatctttggcccattcacttaggcccagtaccatccaaatcccaaacaccacgtttggcaaaattactcgtgacacaccc 17285  T
Q  417 ctttcagacca-gggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactc 500  Q
    ||| ||  | | |||||||||| || | ||||||| |||||||||||| || |||||||||| |  |||||||||||||||||||    
T  17284 cttccacgcgaggggggtgcacggaacgaaagagactggttcaaacgaaccccaacgtctctttccacgttcccgcaataaactc 17200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 543 - 593
Target Start/End: Complemental strand, 17190 - 17140
Alignment:
Q  543 aggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||| ||||    
T  17190 aggtgtgccattacaacagctctgcagccctccacctctataaatatggga 17140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 317 - 591
Target Start/End: Original strand, 2697 - 2974
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| ||||||| |||||||||  |||||||||||||  |||||| ||||| ||  |||||||||||| ||  ||||||||  |||||||| |||   ||    
T  2697 tgttttggaccgaccaaaaggagctttggcccatttacataggcctaatacaattcaaagcccaaacaccatctttggcaacattacttgctacacaacc 2796  T
Q  417 ctt---tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttaca 513  Q
    |||   |  ||   |||||||||| |||| ||  |||  |||||||||||  ||||| ||||||||| ||||||| | ||||| |||||| |||||||||    
T  2797 cttctctgcgaggggggggtgcacggagcgaacaagaccggttcaaacgaaacacaatgtctctctgcacgttccagtaataatctctctagcggttaca 2896  T
Q  514 cttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaataggg 591  Q
    ||||||| |||||| |||||||||||| | |||||| ||||||||||||| |||| | ||||||||||||| ||||||    
T  2897 cttcccacgatttcgtaaccgccagagcctggtgtgccattacaacagctctgcagctctccacctctatatataggg 2974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 317 - 593
Target Start/End: Original strand, 37095 - 37371
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||| ||||||||  |||| |||||||| |||||| |||||| ||| ||| |  ||| | |||||||||||  ||||||||| |||  |||    
T  37095 tgttctggaccggtcaaaaggagctttgacccatttacttaggctcaatacaatccaaatctaaaataccacgtttggcagtgttacttgcgacacaccc 37194  T
Q  417 ctt-tcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacact 515  Q
    ||| || |     ||||||||||||||||   |||  | ||||||| | || ||||||||||||| | ||||| ||||||| ||||||| ||||||||||    
T  37195 cttctccgcgacaggggtgcacagagcaagcaagaccgattcaaacaaaccgcaacgtctctctgcatgttcctgcaataatctctctg-cggttacact 37293  T
Q  516 tcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| ||||||||||||||||||| | || ||| ||| ||||| ||| |||| ||||||||||||||| ||||||||    
T  37294 tcccacgatttcataaccgccagagcctggcgtgccatcacaacggctctgcagccctccacctctatatatagggga 37371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 317 - 538
Target Start/End: Complemental strand, 9461 - 9243
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    |||| |||||||||| | ||||  ||||||||||||| || || ||||||| ||  |||||||||||| ||||||||||||  |||||||| |||  |||    
T  9461 tgttatggaccggcctagaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacaccc 9362  T
Q  417 ctttcagaccagggggtgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcgg-ttacact 515  Q
    |||||   | ||  ||||||| ||||    |||| |||||||||||| |||||||||||||||| ||||||| |||||||||||||| |||| |||||||    
T  9361 ctttcccgcgagcaggtgcacggagc----gagactggttcaaacgaaccacaacgtctctctgcacgttcctgcaataaactctctagcggtttacact 9266  T
Q  516 tcccatgatttcataaccgccag 538  Q
    |||||  ||||| ||||||||||    
T  9265 tcccacaatttcgtaaccgccag 9243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1272 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold1272
Description:

Target: scaffold1272; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 317 - 421
Target Start/End: Complemental strand, 2074 - 1970
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatacgatctaaagcccaaacatcacgtttggcaaggttacttgcaacatcccc 416  Q
    ||||||||||||||||||||||  ||||||||||||| || || ||||||| ||  |||||||||||| ||||||||||||  |||||||| |||  |||    
T  2074 tgttctggaccggccaaaaggagttttggcccatttacttgggtccaatactattcaaagcccaaacaccacgtttggcaaaattacttgcgacacaccc 1975  T
Q  417 ctttc 421  Q
    |||||    
T  1974 ctttc 1970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 509 - 593
Target Start/End: Original strand, 86424 - 86508
Alignment:
Q  509 ttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    |||||||| ||| |||||| ||| |||||||| |  ||||| |||||||||  || |||||||||||||||||||| ||||||||    
T  86424 ttacactttccacgatttcgtaatcgccagagcctagtgtgccattacaacgactttgcaaccctccacctctatatatagggga 86508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 18307 - 18257
Alignment:
Q  317 tgttctggaccggccaaaaggacatttggcccatttatttaggcccaatac 367  Q
    |||| |||||||||||||||||| ||||||||||||| ||||||| |||||    
T  18307 tgttttggaccggccaaaaggacctttggcccatttacttaggccaaatac 18257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 593
Target Start/End: Original strand, 20336 - 20430
Alignment:
Q  499 tctctggcggttacacttcccatgatttcataaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| ||||||||||||||||  ||||  |||||||  ||  || ||||  ||||||||| ||| |||| ||||||||||||| ||||||||||    
T  20336 tctctagcggttacacttcccacaattttgtaaccgcttgacccaagtgtaccattacaacggctctgcagccctccacctctaaaaatagggga 20430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 529 - 593
Target Start/End: Complemental strand, 19268 - 19204
Alignment:
Q  529 taaccgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    ||||| ||||||  ||||||| | ||||||  ||| |||| ||||||||||||||||||||||||    
T  19268 taaccaccagagctaggtgtgccgttacaatggctctgcagccctccacctctataaatagggga 19204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 433 - 593
Target Start/End: Original strand, 36765 - 36925
Alignment:
Q  433 tgcacagagcaaaagagaatggttcaaacgagccacaacgtctctctgtacgttcccgcaataaactctctggcggttacacttcccatgatttcataac 532  Q
    ||||||||||||  |||||  |||||||||| |  ||||||||||  | | ||||||||||    |||| ||| ||||||||||||||  ||||| ||||    
T  36765 tgcacagagcaagcgagaacagttcaaacgaactgcaacgtctcttcgcaagttcccgcaaatctctctttggaggttacacttcccacaatttcgtaac 36864  T
Q  533 cgccagagtcaggtgtgtcattacaacagctatgcaaccctccacctctataaatagggga 593  Q
    || | ||  || ||||| ||||||||| ||| | || ||  ||||||||||| ||||||||    
T  36865 cgtcggacacacgtgtgccattacaacggctctacagccacccacctctatatatagggga 36925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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