View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19708_low_18 (Length: 273)

Name: NF19708_low_18
Description: NF19708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19708_low_18
NF19708_low_18
[»] chr3 (35 HSPs)
chr3 (38-192)||(53070420-53070575)
chr3 (12-192)||(42386655-42386837)
chr3 (89-161)||(54973660-54973733)
chr3 (89-161)||(54976270-54976343)
chr3 (89-161)||(54978880-54978953)
chr3 (78-185)||(17248048-17248156)
chr3 (81-186)||(2050964-2051070)
chr3 (59-192)||(25476128-25476262)
chr3 (82-138)||(37250932-37250988)
chr3 (81-172)||(52523492-52523584)
chr3 (78-192)||(14973098-14973213)
chr3 (59-185)||(40213464-40213591)
chr3 (78-123)||(14572902-14572947)
chr3 (81-123)||(12934075-12934117)
chr3 (81-138)||(324534-324591)
chr3 (38-122)||(11424484-11424569)
chr3 (79-122)||(839543-839586)
chr3 (78-192)||(14576595-14576710)
chr3 (81-146)||(1465174-1465240)
chr3 (81-123)||(1644447-1644489)
chr3 (80-122)||(16097645-16097687)
chr3 (81-123)||(32307983-32308025)
chr3 (81-123)||(49667848-49667890)
chr3 (89-122)||(13210100-13210133)
chr3 (81-138)||(15471224-15471281)
chr3 (78-123)||(17488170-17488215)
chr3 (78-123)||(20698199-20698244)
chr3 (89-122)||(24188074-24188107)
chr3 (78-123)||(26687200-26687245)
chr3 (89-122)||(28350937-28350970)
chr3 (89-122)||(55149275-55149308)
chr3 (81-121)||(12171869-12171909)
chr3 (32-119)||(14234809-14234896)
chr3 (82-122)||(22110116-22110156)
chr3 (89-121)||(23083135-23083167)
[»] chr6 (26 HSPs)
chr6 (38-192)||(18456959-18457114)
chr6 (89-161)||(8523206-8523279)
chr6 (89-161)||(15685874-15685947)
chr6 (81-138)||(27333049-27333106)
chr6 (81-138)||(27393789-27393846)
chr6 (78-192)||(19303303-19303418)
chr6 (78-192)||(20594017-20594132)
chr6 (59-192)||(29060784-29060918)
chr6 (81-138)||(4667978-4668035)
chr6 (12-135)||(23019709-23019833)
chr6 (82-138)||(19668672-19668728)
chr6 (89-192)||(25644566-25644670)
chr6 (65-123)||(28496222-28496280)
chr6 (81-122)||(4185588-4185629)
chr6 (81-122)||(22080502-22080543)
chr6 (78-123)||(29808646-29808691)
chr6 (78-122)||(18821582-18821626)
chr6 (81-120)||(19652512-19652551)
chr6 (84-122)||(25928594-25928632)
chr6 (81-119)||(25956386-25956424)
chr6 (93-138)||(4189255-4189300)
chr6 (93-138)||(4674837-4674882)
chr6 (78-123)||(16920396-16920441)
chr6 (78-123)||(20360723-20360768)
chr6 (78-122)||(15894193-15894237)
chr6 (78-122)||(25611486-25611530)
[»] scaffold0031 (1 HSPs)
scaffold0031 (38-199)||(20147-20309)
[»] chr7 (33 HSPs)
chr7 (38-192)||(12756438-12756593)
chr7 (81-186)||(12255556-12255662)
chr7 (4-192)||(38227724-38227914)
chr7 (89-161)||(16006692-16006765)
chr7 (78-186)||(17061722-17061831)
chr7 (81-192)||(2279883-2279995)
chr7 (89-160)||(21743059-21743131)
chr7 (4-191)||(15143724-15143913)
chr7 (81-149)||(16056615-16056684)
chr7 (89-161)||(8776634-8776707)
chr7 (81-138)||(22073215-22073272)
chr7 (82-192)||(15008263-15008375)
chr7 (12-149)||(16219411-16219550)
chr7 (4-123)||(44116819-44116938)
chr7 (81-123)||(810894-810936)
chr7 (78-123)||(26212309-26212354)
chr7 (84-146)||(68036-68099)
chr7 (83-122)||(9389462-9389501)
chr7 (82-186)||(14036448-14036554)
chr7 (82-186)||(14346478-14346584)
chr7 (84-138)||(47832108-47832162)
chr7 (78-123)||(9509502-9509547)
chr7 (89-122)||(11262625-11262658)
chr7 (89-122)||(11548043-11548076)
chr7 (89-122)||(11554639-11554672)
chr7 (89-122)||(12692792-12692825)
chr7 (89-122)||(14953494-14953527)
chr7 (89-122)||(14959460-14959493)
chr7 (89-149)||(16324293-16324354)
chr7 (78-123)||(40443702-40443747)
chr7 (81-122)||(44014489-44014530)
chr7 (84-186)||(14044998-14045102)
chr7 (84-186)||(14355028-14355132)
[»] chr4 (29 HSPs)
chr4 (42-192)||(21815357-21815508)
chr4 (42-186)||(21815028-21815173)
chr4 (42-186)||(21818450-21818595)
chr4 (81-186)||(52242958-52243064)
chr4 (78-192)||(44928685-44928800)
chr4 (78-199)||(44102447-44102569)
chr4 (81-192)||(15464694-15464807)
chr4 (89-160)||(4171299-4171371)
chr4 (89-160)||(14698991-14699063)
chr4 (78-192)||(14038892-14039007)
chr4 (78-192)||(15091140-15091255)
chr4 (89-161)||(41791946-41792019)
chr4 (78-199)||(44053066-44053187)
chr4 (78-123)||(7089190-7089235)
chr4 (81-122)||(15099665-15099706)
chr4 (78-123)||(17047835-17047880)
chr4 (81-138)||(39706052-39706109)
chr4 (59-123)||(16377265-16377329)
chr4 (81-123)||(12774313-12774355)
chr4 (89-146)||(15190607-15190665)
chr4 (78-123)||(3096956-3097001)
chr4 (78-123)||(7799010-7799055)
chr4 (89-122)||(8846689-8846722)
chr4 (78-123)||(12903070-12903115)
chr4 (89-122)||(14679259-14679292)
chr4 (89-122)||(14685468-14685501)
chr4 (89-122)||(23838730-23838763)
chr4 (89-122)||(35614236-35614269)
chr4 (89-122)||(41385521-41385554)
[»] scaffold0503 (1 HSPs)
scaffold0503 (38-192)||(12173-12328)
[»] chr5 (23 HSPs)
chr5 (81-192)||(22144294-22144406)
chr5 (89-161)||(26496160-26496232)
chr5 (78-192)||(36154590-36154705)
chr5 (59-192)||(1096711-1096845)
chr5 (78-192)||(9078196-9078311)
chr5 (78-192)||(11581007-11581122)
chr5 (89-161)||(29324994-29325067)
chr5 (81-146)||(5888940-5889006)
chr5 (81-122)||(22959298-22959339)
chr5 (81-129)||(21501919-21501967)
chr5 (78-192)||(25421776-25421891)
chr5 (84-122)||(15441725-15441763)
chr5 (84-122)||(25744036-25744074)
chr5 (78-123)||(21292733-21292778)
chr5 (89-122)||(21295039-21295072)
chr5 (32-146)||(21329210-21329326)
chr5 (81-118)||(21741308-21741345)
chr5 (78-123)||(22075332-22075377)
chr5 (78-123)||(22107136-22107181)
chr5 (89-122)||(23337064-23337097)
chr5 (78-123)||(23390259-23390304)
chr5 (89-122)||(25535285-25535318)
chr5 (81-138)||(26011799-26011856)
[»] scaffold0056 (2 HSPs)
scaffold0056 (94-172)||(79107-79186)
scaffold0056 (4-123)||(16902-17022)
[»] scaffold0839 (1 HSPs)
scaffold0839 (78-185)||(1839-1947)
[»] chr2 (18 HSPs)
chr2 (89-161)||(21238880-21238952)
chr2 (89-161)||(21241430-21241502)
chr2 (89-161)||(24504977-24505049)
chr2 (89-161)||(31503873-31503946)
chr2 (89-161)||(31506439-31506512)
chr2 (78-192)||(22337359-22337474)
chr2 (78-186)||(23076692-23076800)
chr2 (82-138)||(23207578-23207634)
chr2 (78-123)||(298577-298622)
chr2 (82-185)||(20519957-20520062)
chr2 (82-135)||(22412900-22412953)
chr2 (80-146)||(25176132-25176199)
chr2 (82-171)||(23005015-23005105)
chr2 (81-119)||(28406297-28406335)
chr2 (89-122)||(31756232-31756265)
chr2 (78-123)||(32451692-32451737)
chr2 (79-123)||(23286174-23286218)
chr2 (59-123)||(23660336-23660400)
[»] chr8 (20 HSPs)
chr8 (89-161)||(21415000-21415073)
chr8 (89-161)||(7300836-7300909)
chr8 (89-160)||(6608028-6608100)
chr8 (78-192)||(41598428-41598543)
chr8 (89-161)||(45134679-45134752)
chr8 (78-192)||(6759500-6759615)
chr8 (78-192)||(16092103-16092218)
chr8 (80-138)||(6520667-6520725)
chr8 (81-138)||(38855015-38855072)
chr8 (81-138)||(39834131-39834188)
chr8 (78-192)||(22875309-22875424)
chr8 (78-123)||(20536521-20536566)
chr8 (81-138)||(21285897-21285954)
chr8 (78-123)||(21918763-21918808)
chr8 (78-123)||(23406694-23406739)
chr8 (78-123)||(18818172-18818217)
chr8 (89-122)||(20527746-20527779)
chr8 (78-123)||(25362903-25362948)
chr8 (81-121)||(21674021-21674061)
chr8 (82-122)||(37116664-37116704)
[»] scaffold0217 (1 HSPs)
scaffold0217 (81-192)||(16365-16477)
[»] scaffold0357 (1 HSPs)
scaffold0357 (84-192)||(15866-15976)
[»] scaffold0141 (1 HSPs)
scaffold0141 (59-192)||(39720-39854)
[»] scaffold0049 (1 HSPs)
scaffold0049 (59-192)||(74958-75092)
[»] scaffold0525 (1 HSPs)
scaffold0525 (89-161)||(9445-9518)
[»] chr1 (20 HSPs)
chr1 (89-161)||(20579739-20579812)
chr1 (82-185)||(26065190-26065295)
chr1 (78-192)||(433251-433366)
chr1 (4-192)||(50209900-50210090)
chr1 (83-192)||(16758895-16759005)
chr1 (80-149)||(52927745-52927815)
chr1 (88-186)||(35260851-35260951)
chr1 (81-122)||(20637165-20637206)
chr1 (78-123)||(38801154-38801199)
chr1 (81-137)||(33681309-33681365)
chr1 (84-146)||(22921635-22921698)
chr1 (81-123)||(21754350-21754392)
chr1 (59-192)||(22532513-22532647)
chr1 (81-135)||(28194213-28194267)
chr1 (81-122)||(20248592-20248633)
chr1 (89-122)||(21438091-21438124)
chr1 (78-119)||(22354335-22354376)
chr1 (89-122)||(23763508-23763541)
chr1 (81-122)||(35981451-35981492)
chr1 (59-123)||(34510094-34510158)
[»] scaffold0586 (1 HSPs)
scaffold0586 (89-161)||(2128-2201)
[»] scaffold0120 (2 HSPs)
scaffold0120 (97-192)||(32740-32836)
scaffold0120 (97-192)||(46169-46265)
[»] scaffold0413 (1 HSPs)
scaffold0413 (78-192)||(15377-15492)
[»] scaffold0142 (1 HSPs)
scaffold0142 (79-193)||(17023-17138)
[»] scaffold0130 (1 HSPs)
scaffold0130 (78-192)||(28074-28189)
[»] scaffold0475 (1 HSPs)
scaffold0475 (81-138)||(9375-9432)
[»] scaffold0084 (1 HSPs)
scaffold0084 (139-192)||(10407-10460)
[»] scaffold0737 (1 HSPs)
scaffold0737 (82-138)||(1562-1618)
[»] scaffold0218 (1 HSPs)
scaffold0218 (82-149)||(7841-7909)
[»] scaffold0138 (2 HSPs)
scaffold0138 (32-149)||(13227-13346)
scaffold0138 (89-122)||(29983-30016)
[»] scaffold0080 (2 HSPs)
scaffold0080 (59-123)||(40226-40290)
scaffold0080 (82-138)||(19649-19705)
[»] scaffold0010 (2 HSPs)
scaffold0010 (82-138)||(60479-60535)
scaffold0010 (89-122)||(242354-242387)
[»] scaffold0228 (3 HSPs)
scaffold0228 (78-192)||(4751-4866)
scaffold0228 (78-192)||(12333-12448)
scaffold0228 (78-192)||(22285-22400)
[»] scaffold0122 (1 HSPs)
scaffold0122 (78-192)||(25827-25942)
[»] scaffold0628 (1 HSPs)
scaffold0628 (81-123)||(2567-2609)
[»] scaffold0034 (1 HSPs)
scaffold0034 (81-146)||(32826-32892)
[»] scaffold1984 (1 HSPs)
scaffold1984 (81-138)||(429-486)
[»] scaffold0125 (1 HSPs)
scaffold0125 (81-122)||(45555-45596)
[»] scaffold0070 (1 HSPs)
scaffold0070 (89-192)||(4767-4871)
[»] scaffold0021 (3 HSPs)
scaffold0021 (82-138)||(136132-136188)
scaffold0021 (82-138)||(144840-144896)
scaffold0021 (78-123)||(124898-124943)
[»] scaffold0012 (1 HSPs)
scaffold0012 (81-192)||(225651-225763)
[»] scaffold0003 (1 HSPs)
scaffold0003 (59-123)||(339694-339758)
[»] scaffold0507 (1 HSPs)
scaffold0507 (81-124)||(7822-7865)
[»] scaffold0078 (1 HSPs)
scaffold0078 (81-124)||(10841-10884)
[»] scaffold0556 (2 HSPs)
scaffold0556 (81-135)||(8318-8372)
scaffold0556 (81-122)||(7126-7167)
[»] scaffold0490 (1 HSPs)
scaffold0490 (77-123)||(2265-2311)
[»] scaffold0309 (1 HSPs)
scaffold0309 (77-123)||(6923-6969)
[»] scaffold0259 (1 HSPs)
scaffold0259 (84-122)||(10474-10512)
[»] scaffold0233 (1 HSPs)
scaffold0233 (84-122)||(14311-14349)
[»] scaffold0211 (1 HSPs)
scaffold0211 (81-123)||(28574-28616)
[»] scaffold0028 (1 HSPs)
scaffold0028 (81-123)||(132967-133009)
[»] scaffold1842 (1 HSPs)
scaffold1842 (78-123)||(812-857)
[»] scaffold0598 (1 HSPs)
scaffold0598 (78-123)||(815-860)
[»] scaffold0403 (1 HSPs)
scaffold0403 (78-123)||(5161-5206)
[»] scaffold0358 (2 HSPs)
scaffold0358 (78-119)||(253-294)
scaffold0358 (78-119)||(5029-5070)
[»] scaffold0292 (2 HSPs)
scaffold0292 (54-123)||(656-725)
scaffold0292 (78-123)||(3783-3828)
[»] scaffold0193 (1 HSPs)
scaffold0193 (78-123)||(13524-13569)
[»] scaffold0175 (1 HSPs)
scaffold0175 (78-123)||(13405-13450)
[»] scaffold0165 (2 HSPs)
scaffold0165 (78-123)||(3794-3839)
scaffold0165 (78-123)||(7858-7903)
[»] scaffold0145 (1 HSPs)
scaffold0145 (78-123)||(39074-39119)
[»] scaffold0102 (1 HSPs)
scaffold0102 (81-138)||(19565-19622)
[»] scaffold0016 (1 HSPs)
scaffold0016 (78-123)||(2164-2209)
[»] scaffold0013 (1 HSPs)
scaffold0013 (89-122)||(9637-9670)
[»] scaffold0011 (2 HSPs)
scaffold0011 (78-123)||(52225-52270)
scaffold0011 (78-123)||(167742-167787)
[»] scaffold0004 (1 HSPs)
scaffold0004 (89-122)||(58194-58227)
[»] scaffold0555 (1 HSPs)
scaffold0555 (81-125)||(10305-10349)
[»] scaffold0305 (1 HSPs)
scaffold0305 (78-122)||(20717-20761)
[»] scaffold0022 (1 HSPs)
scaffold0022 (82-122)||(128735-128775)


Alignment Details
Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 53070420 - 53070575
Alignment:
Q  38 agattgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga 137  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  53070420 agattgaacctggattaattaagaatgaactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga 53070519  T
Q  138 agccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||||| ||||||||| ||||||| |||||||||| | ||| ||||||| |||||    
T  53070520 agccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 53070575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 192
Target Start/End: Complemental strand, 42386837 - 42386655
Alignment:
Q  12 taatggttaggcaagacttcagattaagattgaacctggattaattaagaatgaactttttcgaagctg-acctgaattcgccatggcgagtagagactc 110  Q
    ||||| ||||||||||||| ||| |  ||||||||||| | || |||||||||||  |||| | || |  ||||||| |||||||||||||||||| |||    
T  42386837 taatgattaggcaagactttagactgtgattgaacctgaaatagttaagaatgaaacttttgggagttatacctgaactcgccatggcgagtagaggctc 42386738  T
Q  111 tcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    || ||||||||||||||||||||||||||||||| ||||||||| |||| || |||||||||| |||||  |||||| |||||    
T  42386737 tcacctcgcgagttgcccaattacagaagccttgtttaggattttgcgaactttgtcgcacgagttgttgtgagttgaacctt 42386655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 54973733 - 54973660
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  54973733 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 54973660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 54976343 - 54976270
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  54976343 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 54976270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 54978953 - 54978880
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  54978953 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 54978880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 17248048 - 17248156
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||  |||| ||||||||  |||| |||| |||| ||||||| |||||||||| | |    
T  17248048 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttagaattttgcgatctttgtcgcacgagtcg 17248147  T
Q  177 ttaagagtt 185  Q
    || ||||||    
T  17248148 ttgagagtt 17248156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 2050964 - 2051070
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| || |||| |||||||||| ||||||||||| |||||||||| ||||| ||  |||| ||||||||| ||||||| ||||||| || |||||     
T  2050964 acctgaactctccatagcgagtagaggctctcgcctcgtgagttgcccagttacaaaatgcttgtttaggattttgcgatctttgtcgcatgagttgttg 2051063  T
Q  180 agagttg 186  Q
    |||||||    
T  2051064 agagttg 2051070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 192
Target Start/End: Original strand, 25476128 - 25476262
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcg 157  Q
    ||||||||  |||| ||| |||||||||| |||||| | ||||||||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||    
T  25476128 agaatgaaacttttggaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcg 25476227  T
Q  158 atctgtgtcgcacgaattgttaagagttggacctt 192  Q
    | || ||| |||||| ||||| ||||||| |||||    
T  25476228 acctttgttgcacgagttgttgagagttgaacctt 25476262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 37250932 - 37250988
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||    
T  37250932 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaa 37250988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 52523492 - 52523584
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacga 172  Q
    ||||||| ||||||| |||||||||| | |||||||  ||||||||||| ||||||||  |||| ||||||||| ||||||| ||||||||||    
T  52523492 acctgaactcgccatagcgagtagaggccctcgcctgacgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacga 52523584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 14973213 - 14973098
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| |||||||||||| |||  ||||   |||||  ||||||||||||||| ||||| |||||||||| | |||    
T  14973213 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcaagtgacccagaaacagagtgccttgttaggattttgcgatttgtgtcgcacaagttg 14973114  T
Q  177 ttaagagttggacctt 192  Q
     ||||||||| |||||    
T  14973113 ctaagagttgaacctt 14973098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 185
Target Start/End: Original strand, 40213464 - 40213591
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcg 157  Q
    |||||||||||||  ||| || ||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||    
T  40213464 agaatgaacttttgggaatctaacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcg 40213563  T
Q  158 atctgtgtcgcacgaattgttaagagtt 185  Q
    | || ||| |||||| ||||| ||||||    
T  40213564 acctttgttgcacgagttgttgagagtt 40213591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 14572947 - 14572902
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||    
T  14572947 ctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagt 14572902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 12934075 - 12934117
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||||||||||||||||||||    
T  12934075 acctgaactcgccatggcgagcagagactctcgcctcgcgagt 12934117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 324591 - 324534
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| || | ||||||||    
T  324591 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccaagttacagaa 324534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 11424484 - 11424569
Alignment:
Q  38 agattgaacctggattaattaagaatgaactttttcgaag-ctgacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||   ||| ||||||||  |||| |||  |||||||||| |||||| ||||||||||| |||||||||||||||    
T  11424484 agattgaacctggaaagatttagaatgaaactttttgaactctgacctgaactcgccacggcgagtagaggctctcgcctcgcgag 11424569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 122
Target Start/End: Complemental strand, 839586 - 839543
Alignment:
Q  79 tgacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||| |||| ||||||||||||||||| ||||||||||||||||    
T  839586 tgacttgaactcgccatggcgagtagatactctcgcctcgcgag 839543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 14576595 - 14576710
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    ||||||||||  ||||| ||||||||||| ||||||||||||||||  || |   ||| |  ||||||||||||||| |||| || ||| |||||| |||    
T  14576595 ctgacctgaacacgccacggcgagtagaggctctcgcctcgcgagtgacctagaaacaaagtgccttgttaggattttgcgacctttgttgcacgagttg 14576694  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  14576695 ttgagagttgaacctt 14576710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 1465174 - 1465240
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    ||||||| | |||||||||||||||| ||||||||||||||| |  ||| |||||||| ||||||||    
T  1465174 acctgaacttgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 1465240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 1644447 - 1644489
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  1644447 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 1644489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 16097687 - 16097645
Alignment:
Q  80 gacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||| ||||||||| |||||||| |||||||||||||||    
T  16097687 gacctgaactcgccatggtgagtagaggctctcgcctcgcgag 16097645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 32308025 - 32307983
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  32308025 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 32307983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 49667848 - 49667890
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  49667848 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 49667890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 13210100 - 13210133
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||||||||||| |||||||||||||||    
T  13210100 tcgccatggcgagtagaggctctcgcctcgcgag 13210133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 15471281 - 15471224
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| | ||||||||| ||  |||||| ||||||||    
T  15471281 acctgaactcgccatggcgagtagaggccctcgcctcgtgaactgcccagttacagaa 15471224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 17488215 - 17488170
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  17488215 ctgacctgaaatcgccacggcgagcagaggctctcgcctcgcgagt 17488170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 20698199 - 20698244
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  20698199 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 20698244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 24188107 - 24188074
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  24188107 tcgccatggcgagtagatactctcgcctcgcgag 24188074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 26687245 - 26687200
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  26687245 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 26687200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 28350937 - 28350970
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  28350937 tcgccatggcgagtagatactctcgcctcgcgag 28350970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 55149308 - 55149275
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  55149308 tcgccatggcgagtagatactctcgcctcgcgag 55149275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 12171869 - 12171909
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcga 121  Q
    ||||||| | |||||||||||||||| ||||||||||||||    
T  12171869 acctgaactggccatggcgagtagaggctctcgcctcgcga 12171909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 119
Target Start/End: Complemental strand, 14234896 - 14234809
Alignment:
Q  32 agattaagattgaacctggattaattaagaatgaactttttcgaagctg-acctgaattcgccatggcgagtagagactctcgcctcgc 119  Q
    ||||| |||||||||| | | || ||||||||||| ||||| | || || ||||||| |||||||||||||||||| | ||||||||||    
T  14234896 agattgagattgaacccgaaatagttaagaatgaa-tttttgggagttgcacctgaactcgccatggcgagtagaggccctcgcctcgc 14234809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 22110116 - 22110156
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||| ||||||| |||||||||| |||||||||||||||    
T  22110116 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 22110156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 23083135 - 23083167
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcga 121  Q
    |||||||||||||||||| ||||||||||||||    
T  23083135 tcgccatggcgagtagaggctctcgcctcgcga 23083167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 18457114 - 18456959
Alignment:
Q  38 agattgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga 137  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  18457114 agattgaacctggattaattaagaatgaactttttggaagctgacctgaactagccatggcgagtagaggctctcgcctcgcgagttgcccaattacaga 18457015  T
Q  138 agccttgtt-aggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||||||| ||||||| ||||||| |||||||||| | ||| ||||||| |||||    
T  18457014 agccttgttcaggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 18456959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 8523279 - 8523206
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  8523279 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 8523206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 15685874 - 15685947
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| | ||||||||| ||||||||| |||||||    
T  15685874 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttccgaagccttgtttaggattttgcgatct 15685947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 27333049 - 27333106
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  27333049 acctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaa 27333106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 27393789 - 27393846
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| ||||||||||||||  |||||||||||||||    
T  27393789 acctgaactcgccatggcgagtagaggctctcgcctcgcgaactgcccaattacagaa 27393846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 19303303 - 19303418
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| ||||||||||| ||||  ||||   |||||  ||||||||||||||| ||||||| |||||||| | |||    
T  19303303 ctgacctgaactcgccacggcgagcagaggctctcgcctcgagagtgacccagaaacagagtgccttgttaggattttgcgatctatgtcgcacaagttg 19303402  T
Q  177 ttaagagttggacctt 192  Q
     ||||||||| |||||    
T  19303403 ctaagagttgaacctt 19303418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 20594132 - 20594017
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||| | |||||| |||| ||||||||||||||||  || |   |||||  ||||||||||||||| |||||||||||||||| | |||    
T  20594132 ctgacctgaactcgctacggcgagcagaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttg 20594033  T
Q  177 ttaagagttggacctt 192  Q
    ||||| |||| |||||    
T  20594032 ttaagggttgaacctt 20594017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 29060918 - 29060784
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcg 157  Q
    |||||||||||||   || |||||||||| |||||| | ||||||||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||    
T  29060918 agaatgaacttttggaaatctgacctgaactcgccacgacgagtagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcg 29060819  T
Q  158 atctgtgtcgcacgaattgttaagagttggacctt 192  Q
    | || ||| |||||| ||| |||||| || |||||    
T  29060818 acctttgttgcacgagttgctaagagctgaacctt 29060784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 4667978 - 4668035
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| ||||||||||||||| | |||| ||||||||    
T  4667978 acctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaa 4668035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 135
Target Start/End: Complemental strand, 23019833 - 23019709
Alignment:
Q  12 taatggttaggcaagacttcagattaagattgaacctggattaatt-aagaatgaactttttcgaagctg-acctgaattcgccatggcgagtagagact 109  Q
    ||||| ||||| |||| || ||||| |||||||||||||| || || ||||||||| ||||| | || |  ||||||| |||||||||||||||||| |     
T  23019833 taatgattaggaaagattttagattgagattgaacctggaatattttaagaatgaa-tttttgggagttacacctgaactcgccatggcgagtagaggcc 23019735  T
Q  110 ctcgcctcgcgagttgcccaattaca 135  Q
    || ||||||||||||| |||||||||    
T  23019734 cttgcctcgcgagttgtccaattaca 23019709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 19668728 - 19668672
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| ||||||||||||||| || ||||||||||||    
T  19668728 cctgaactcgccatagcgagtagaggctctcgcctcgcgagctgtccaattacagaa 19668672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 25644670 - 25644566
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttgg 187  Q
    ||||||| |||||||||| | |||||||||||||||||||  || |||||  |||| ||||| ||| ||||||| |||||||||| ||| | |||||||     
T  25644670 tcgccatagcgagtagaggccctcgcctcgcgagttgcccggtttcagaatgcttgtttaggtttttgcgatctttgtcgcacgagttgctgagagttga 25644571  T
Q  188 acctt 192  Q
    |||||    
T  25644570 acctt 25644566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 28496222 - 28496280
Alignment:
Q  65 aactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||  ||| |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  28496222 aacttttgagaatctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28496280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 4185588 - 4185629
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  4185588 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 4185629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 22080502 - 22080543
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  22080502 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 22080543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 29808646 - 29808691
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  29808646 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 29808691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 18821582 - 18821626
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||    
T  18821582 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgag 18821626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 19652551 - 19652512
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcg 120  Q
    ||||||| |||||||||||||||||| |||||||||||||    
T  19652551 acctgaactcgccatggcgagtagaggctctcgcctcgcg 19652512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 25928632 - 25928594
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  25928632 tgaactcgccatggcgagtagatactctcgcctcgcgag 25928594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Original strand, 25956386 - 25956424
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgc 119  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  25956386 acctgtattcgccatggcgagtagaggctctcgcctcgc 25956424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 4189300 - 4189255
Alignment:
Q  93 catggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||||||||||| ||||||||||||||| | |||| ||||||||    
T  4189300 catggcgagtagaggctctcgcctcgcgagctacccatttacagaa 4189255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 93 - 138
Target Start/End: Original strand, 4674837 - 4674882
Alignment:
Q  93 catggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||||||||||| ||||||||||||||| | |||| ||||||||    
T  4674837 catggcgagtagaggctctcgcctcgcgagctacccatttacagaa 4674882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 16920396 - 16920441
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||| ||||||    
T  16920396 ctgacctgaactcgccatggcgagcagaggctctcgccttgcgagt 16920441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 20360723 - 20360768
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||||||||||  ||| ||||||||||||||||    
T  20360723 ctgacctgaactcgccatggcgagctgaggctctcgcctcgcgagt 20360768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 15894193 - 15894237
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||    
T  15894193 ctgacctgaactcgccatggcgagcagagtctctcacctcgcgag 15894237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 25611486 - 25611530
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||| ||||||||| ||| |||| |||||||||||||||    
T  25611486 ctgacctgaactcgccatggagagcagaggctctcgcctcgcgag 25611530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 199
Target Start/End: Original strand, 20147 - 20309
Alignment:
Q  38 agattgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga 137  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||    
T  20147 agattgaacctggattaattaagaatgaactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcaagttgcctaattacaga 20246  T
Q  138 agccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttggaccttaggatag 199  Q
    ||||||| ||||||||| ||| ||| |||||||||| | ||| ||||||| ||||| ||||||    
T  20247 agccttgtttaggattttgcggtctttgtcgcacgagtcgttgagagttgaaccttgggatag 20309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 192
Target Start/End: Original strand, 12756438 - 12756593
Alignment:
Q  38 agattgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga 137  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| |    
T  12756438 agattgaacctggattatttaagaatgaactttttggaagctgacctgaactcaccatggcgagtagaggctctcgcctcgcgagttgcccaattacaaa 12756537  T
Q  138 agccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||||| ||||||||| ||||||| |||||||||| | ||| ||||||| |||||    
T  12756538 agccttgtttaggattttgcgatctttgtcgcacgagtcgttgagagttgaacctt 12756593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 12255556 - 12255662
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| |||| ||||||||  |||| ||||||||| ||||||| |||| ||||| |||||     
T  12255556 acctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaatgcttgtttaggattttgcgatctttgtcacacgagttgttg 12255655  T
Q  180 agagttg 186  Q
    |||||||    
T  12255656 agagttg 12255662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 192
Target Start/End: Complemental strand, 38227914 - 38227724
Alignment:
Q  4 atgtctagtaatggttaggcaagacttcagattaagattgaacctggattaattaagaatgaa-ctttttcgaagctgacctgaattcgccatggcgagt 102  Q
    ||||||| ||||| ||||| |||| |  ||| | ||||||||||||||   ||| |||||||| |||||| ||  |||||||||| |||||| ||||||     
T  38227914 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaactttttggattctgacctgaactcgccacggcgagc 38227815  T
Q  103 agagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    |||| ||||||||||||||||  ||||   |||||  ||||||||||| ||| |||| || ||| |||||| ||||||||||||| |||||    
T  38227814 agaggctctcgcctcgcgagtgacccataaacagagtgccttgttaggtttttgcgacctttgttgcacgagttgttaagagttgaacctt 38227724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 16006765 - 16006692
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  16006765 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 16006692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 186
Target Start/End: Original strand, 17061722 - 17061831
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||  || | ||||||||  |||| ||||||||| ||||||| |||||||||| | |    
T  17061722 ctgacctgaactcgcgatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 17061821  T
Q  177 ttaagagttg 186  Q
    || |||||||    
T  17061822 ttgagagttg 17061831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 2279883 - 2279995
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| ||||||| |||||||||| | |||||||||||||||||| | ||| ||||  |||| ||||||||| ||||||| |||| ||||| |||||     
T  2279883 acctgaactcgccatagcgagtagaggccctcgcctcgcgagttgcctagttatagaatgcttgtttaggattttgcgatctttgtcacacgagttgttg 2279982  T
Q  180 agagttggacctt 192  Q
    ||||||| |||||    
T  2279983 agagttgaacctt 2279995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 21743059 - 21743131
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatc 160  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  21743059 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatc 21743131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 191
Target Start/End: Original strand, 15143724 - 15143913
Alignment:
Q  4 atgtctagtaatggttaggcaagacttcagattaagattgaacctggattaatta-agaatgaactttttcgaagctgacctgaattcgccatggcgagt 102  Q
    ||||||| ||||| ||||| |||| || ||| | ||||||||||||||   |||  |||||||||||||  ||  |||||||| | |||||||||||||     
T  15143724 atgtctaataatgattaggaaagattttagaatgagattgaacctggaaagattttagaatgaacttttgtgattctgacctgtactcgccatggcgagc 15143823  T
Q  103 agagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacct 191  Q
    |||| ||||||||||||||||  || |   |||||  ||||||||||||||| |||| || ||| |||||| ||| ||||||||| ||||    
T  15143824 agaggctctcgcctcgcgagtgacctagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgctaagagttgaacct 15143913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 16056684 - 16056615
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttagg 149  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| |||| |||||||| |||||||||||    
T  16056684 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttacccagttacagaatgccttgttagg 16056615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 8776707 - 8776634
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    ||||||||| |||||||| |||||||||||||||||| || ||| || |||||||| ||||||||| |||||||    
T  8776707 tcgccatggtgagtagagcctctcgcctcgcgagttgtcccatttcataagccttgtttaggattttgcgatct 8776634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 22073272 - 22073215
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| | ||||||||||||||| |||| ||||||||    
T  22073272 acctgaactcgccatggcgagtagaggccctcgcctcgcgagttacccagttacagaa 22073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 15008263 - 15008375
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    |||||| || |||| |||||||||| |||||||||||||||||||||| ||  ||||  ||||| ||||| ||| ||||||| ||||||||||  |||||    
T  15008263 cctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttgtagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 15008362  T
Q  180 agagttggacctt 192  Q
     |||||| |||||    
T  15008363 tgagttgaacctt 15008375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 16219411 - 16219550
Alignment:
Q  12 taatggttaggcaagacttcagattaagattgaacctggattaatt-aagaatgaactttttcgaagctg-acctgaattcgccatggcgagtagagact 109  Q
    ||||| ||||| |||| || ||||| |||||||||||||| || || ||||||||| ||||| | || |  || |||| |||||||||||||||||| |     
T  16219411 taatgattaggaaagattttagattgagattgaacctggaatagtttaagaatgaa-tttttgggagttacacgtgaactcgccatggcgagtagaggcc 16219509  T
Q  110 ctcgcctcgcgagttgcccaattacagaa-gccttgttagg 149  Q
    |||||||||||||||| | | |||||||| |||||||||||    
T  16219510 ctcgcctcgcgagttgtctagttacagaatgccttgttagg 16219550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 123
Target Start/End: Complemental strand, 44116938 - 44116819
Alignment:
Q  4 atgtctagtaatggttaggcaagacttcagattaagattgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagta 103  Q
    ||||||| ||||| ||||| |||| |  ||| | |||||||||| |||   ||| ||||||||  |||  ||| |||||||||| ||||||||||||| |    
T  44116938 atgtctaataatgattaggaaagaatgtagaatgagattgaacccggaaagatttagaatgaaactttgggaatctgacctgaactcgccatggcgagca 44116839  T
Q  104 gagactctcgcctcgcgagt 123  Q
    ||| ||||||||||||||||    
T  44116838 gaggctctcgcctcgcgagt 44116819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 810894 - 810936
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  810894 acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 810936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 26212354 - 26212309
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  26212354 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagt 26212309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 68099 - 68036
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    |||| |||||||||||||||||| ||||||||||||||| |  ||| |||||||| ||||||||    
T  68099 tgaactcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 68036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 9389462 - 9389501
Alignment:
Q  83 ctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||| |||||||||||||||||| |||||||||||||||    
T  9389462 ctgaactcgccatggcgagtagaggctctcgcctcgcgag 9389501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 14036554 - 14036448
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    |||||| ||||||| ||||||||||   ||||||||||||| || |||||| |||||  ||||| ||||| ||| ||||||| ||||||||||  |||||    
T  14036554 cctgaactcgccatagcgagtagagtggctcgcctcgcgagctggccaatttcagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 14036455  T
Q  180 agagttg 186  Q
     ||||||    
T  14036454 tgagttg 14036448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 186
Target Start/End: Complemental strand, 14346584 - 14346478
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    |||||| ||||||| ||||||||||   ||||||||||||| || |||||| |||||  ||||| ||||| ||| ||||||| ||||||||||  |||||    
T  14346584 cctgaactcgccatagcgagtagagtggctcgcctcgcgagctggccaatttcagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 14346485  T
Q  180 agagttg 186  Q
     ||||||    
T  14346484 tgagttg 14346478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 138
Target Start/End: Complemental strand, 47832162 - 47832108
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||| |||||||||||||||||| | ||||||||||||  |||||| ||||||||    
T  47832162 tgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaa 47832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 9509547 - 9509502
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  9509547 ctgacctgaactcgccacggcgaggagaggctctcgcctcgcgagt 9509502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 11262658 - 11262625
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  11262658 tcgccatggcgagtagatactctcgcctcgcgag 11262625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 11548043 - 11548076
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  11548043 tcgccatggcgagtagatactctcgcctcgcgag 11548076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 11554639 - 11554672
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  11554639 tcgccatggcgagtagatactctcgcctcgcgag 11554672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 12692825 - 12692792
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  12692825 tcgccatggcgagtagatactctcgcctcgcgag 12692792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 14953527 - 14953494
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  14953527 tcgccatggcgagtagatactctcgcctcgcgag 14953494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 14959493 - 14959460
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  14959493 tcgccatggcgagtagatactctcgcctcgcgag 14959460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 16324354 - 16324293
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttagg 149  Q
    |||||||||||||||||| | ||||||| ||||  |||||| |||||||| |||||||||||    
T  16324354 tcgccatggcgagtagaggccctcgccttgcgaactgcccagttacagaatgccttgttagg 16324293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 40443747 - 40443702
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  40443747 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 40443702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 44014530 - 44014489
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| ||||||||| |||||||| |||||||||||||||    
T  44014530 acctgaactcgccatggtgagtagaggctctcgcctcgcgag 44014489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 14045102 - 14044998
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaag 181  Q
    |||| ||||||| ||||||||||   ||||||||||||| |||||| || |||||  ||||| ||||| ||| ||||||| ||||||||||  ||||| |    
T  14045102 tgaactcgccatagcgagtagagtggctcgcctcgcgagctgcccagtttcagaataccttgtttagggttttgcgatctttgtcgcacgagatgttatg 14045003  T
Q  182 agttg 186  Q
    |||||    
T  14045002 agttg 14044998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 186
Target Start/End: Complemental strand, 14355132 - 14355028
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaag 181  Q
    |||| ||||||| ||||||||||   ||||||||||||| |||||| || |||||  ||||| ||||| ||| ||||||| ||||||||||  ||||| |    
T  14355132 tgaactcgccatagcgagtagagtggctcgcctcgcgagctgcccagtttcagaataccttgtttagggttttgcgatctttgtcgcacgagatgttatg 14355033  T
Q  182 agttg 186  Q
    |||||    
T  14355032 agttg 14355028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 192
Target Start/End: Original strand, 21815357 - 21815508
Alignment:
Q  42 tgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagcc 141  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21815357 tgaacctggattaattaagaatgaactttttggaagctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagcc 21815456  T
Q  142 ttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||| ||||||||| |||||||   |||||||| | ||| ||||||| |||||    
T  21815457 ttgtttaggattttgcgatcttcatcgcacgagtcgttgagagttgaacctt 21815508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 21815028 - 21815173
Alignment:
Q  42 tgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagcc 141  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21815028 tgaacctggattaattaagaatgaactttttggaagctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagcc 21815127  T
Q  142 ttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttg 186  Q
    ||| ||||||||| |||||||   |||||||| | ||| |||||||    
T  21815128 ttgtttaggattttgcgatcttcatcgcacgagtcgttgagagttg 21815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 21818450 - 21818595
Alignment:
Q  42 tgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagcc 141  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21818450 tgaacctggattaattaagaatgaactttttggaagctgacttgaactcgccatggcgagtagaggctctcgcctcgcgagttgcccaattacagaagcc 21818549  T
Q  142 ttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttg 186  Q
    ||| ||||||||| |||||||   |||||||| | ||| |||||||    
T  21818550 ttgtttaggattttgcgatcttcatcgcacgagtcgttgagagttg 21818595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 81 - 186
Target Start/End: Original strand, 52242958 - 52243064
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||  |||| ||||||||| ||||||| |||||||||| | || |    
T  52242958 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcgtaa 52243057  T
Q  180 agagttg 186  Q
    |||||||    
T  52243058 agagttg 52243064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 44928685 - 44928800
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||| ||| ||||||||||||| |||| ||||||||||||||||  |||| ||||||||  |||| ||||||||| ||||||| |||||||||| | |    
T  44928685 ctgaccagaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 44928784  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  44928785 ttgagagttgaacctt 44928800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 44102569 - 44102447
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||  || | ||||||||  |||| ||||||||| ||||||| ||| |||||| | |    
T  44102569 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagtcg 44102470  T
Q  177 ttaagagttggaccttaggatag 199  Q
    || ||||||| ||||| ||||||    
T  44102469 ttgagagttgaaccttgggatag 44102447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 15464694 - 15464807
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgtt 178  Q
    ||||||| || |||| |||||||||| |||||||||||||||||||||| |||||||| | |||| ||||||||| || |||| |||||||| | |||||    
T  15464694 acctgaactcaccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgacttgtttaggattttgcaatctttgtcgcacaagttgtt 15464793  T
Q  179 aagagttggacctt 192  Q
    | |||||| |||||    
T  15464794 atgagttgaacctt 15464807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 4171371 - 4171299
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatc 160  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  4171371 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatc 4171299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 14699063 - 14698991
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatc 160  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  14699063 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggatttggcgatc 14698991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 14039007 - 14038892
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||| ||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||||||||||||||| | |||    
T  14039007 ctgaccagaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttg 14038908  T
Q  177 ttaagagttggacctt 192  Q
     ||||||||| |||||    
T  14038907 ctaagagttgaacctt 14038892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 15091255 - 15091140
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||||||||||||||| | ||     
T  15091255 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttt 15091156  T
Q  177 ttaagagttggacctt 192  Q
     ||||||||| |||||    
T  15091155 ctaagagttgaacctt 15091140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 41792019 - 41791946
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||| ||| || ||| ||||||||||| ||||||||| |||||||    
T  41792019 tcgccatggcgagtagagcctctcgcctcgcgatttgtcccatttcagaagccttgtttaggattttgcgatct 41791946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 199
Target Start/End: Complemental strand, 44053187 - 44053066
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||  ||||   |||||  ||||||||| ||||| |||| || ||| |||||| |||    
T  44053187 ctgacctgaactcgccacggcgagcagagactctcgcctcgcgagtgacccagaaacagagtgccttgtta-gattttgcgacctttgttgcacgagttg 44053089  T
Q  177 ttaagagttggaccttaggatag 199  Q
    |  ||||||| ||||| ||||||    
T  44053088 tcgagagttgaaccttgggatag 44053066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 7089235 - 7089190
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  7089235 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 7089190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 15099706 - 15099665
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  15099706 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 15099665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 17047835 - 17047880
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  17047835 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 17047880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 39706052 - 39706109
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| | ||||||||||||  |||||| ||||||||    
T  39706052 acctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcccagttacagaa 39706109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 16377265 - 16377329
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||||||  ||| |||||||||| |||||| |||||| |||| |||||||||| |||||    
T  16377265 agaatgaacttttgggaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagt 16377329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 12774355 - 12774313
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  12774355 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 12774313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 15190665 - 15190607
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    |||||||||||||||||| ||||||||||||||| |  ||| |||||||| ||||||||    
T  15190665 tcgccatggcgagtagaggctctcgcctcgcgagctaaccagttacagaatgccttgtt 15190607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 3097001 - 3096956
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  3097001 ctgacctgaactcgccaaggcgagcagaggctctcgcctcgcgagt 3096956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 7799055 - 7799010
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  7799055 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 7799010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 8846722 - 8846689
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||||||||||| |||||||||||||||    
T  8846722 tcgccatggcgagtagaggctctcgcctcgcgag 8846689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 12903115 - 12903070
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| ||| ||||||||||||    
T  12903115 ctgacctgaactcgccacggcgagtagaggctcccgcctcgcgagt 12903070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 14679292 - 14679259
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  14679292 tcgccatggcgagtagatactctcgcctcgcgag 14679259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 14685501 - 14685468
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  14685501 tcgccatggcgagtagatactctcgcctcgcgag 14685468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 23838763 - 23838730
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  23838763 tcgccatggcgagtagatactctcgcctcgcgag 23838730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 35614269 - 35614236
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  35614269 tcgccatggcgagtagatactctcgcctcgcgag 35614236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 41385521 - 41385554
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  41385521 tcgccatggcgagtagatactctcgcctcgcgag 41385554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 38 - 192
Target Start/End: Complemental strand, 12328 - 12173
Alignment:
Q  38 agattgaacctggattaattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga 137  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  12328 agattgaacctggattaattaagaatgaactttttggaaactgacctgaactcgccatggcgagtagaggctctcacctcgcgagttgcccaattacaga 12229  T
Q  138 agccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    |||| || ||||||||| ||||||| |||| ||||| | ||| ||||||| |||||    
T  12228 agccctgtttaggattttgcgatctttgtcacacgagtcgttgagagttgaacctt 12173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 22144406 - 22144294
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||  |||| ||||||||| ||||||| |||||||||| |||||     
T  22144406 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttg 22144307  T
Q  180 agagttggacctt 192  Q
    ||||||| |||||    
T  22144306 agagttgaacctt 22144294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 26496232 - 26496160
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttgttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  26496232 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgttaggattttgcgatct 26496160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 36154590 - 36154705
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||  || | ||||||||  |||| ||||||||| ||||||| |||||||||| | |    
T  36154590 ctgacctgaactcgccatggcgagtagaggctctcgcctcgcgagtgacctatttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 36154689  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  36154690 ttgagagttgaacctt 36154705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 1096845 - 1096711
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcg 157  Q
    |||||||||||||   || |||||||||| |||||| ||||||||||| ||||||||||||||||  ||||   |||||| ||||| |||| |||| |||    
T  1096845 agaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagaatgcctttttagaattttgcg 1096746  T
Q  158 atctgtgtcgcacgaattgttaagagttggacctt 192  Q
    |||| |||||||| | ||||||| |||||||||||    
T  1096745 atctctgtcgcacaagttgttaaaagttggacctt 1096711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 9078311 - 9078196
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||||||||||||||| | |||    
T  9078311 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgatctgtgtcgcacaagttg 9078212  T
Q  177 ttaagagttggacctt 192  Q
    ||||| |||| |||||    
T  9078211 ttaagggttgaacctt 9078196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 11581007 - 11581122
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||  |||| ||||||||  |||| ||||||||| ||||||| ||||| |||| | |    
T  11581007 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccatttacagaatgcttgtttaggattttgcgatctttgtcgtacgagtcg 11581106  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  11581107 ttgagagttgaacctt 11581122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 29324994 - 29325067
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  29324994 tcgccatggcgagtagagcctctcgcctcgcgagttgtcctatttcagaagccttgtttaggattttgcgatct 29325067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 5888940 - 5889006
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    ||||||| |||||||||||||||||| ||||||||||||||| | |||| |||||||| ||||||||    
T  5888940 acctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaatgccttgtt 5889006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 22959298 - 22959339
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  22959298 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 22959339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 21501919 - 21501967
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgccca 129  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||    
T  21501919 acctgaactcgccatagcgagtagaggctctcgcctcgcgagttaccca 21501967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 25421891 - 25421776
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    ||||| |||| |||||| ||||||||||| ||||||||||||||||  || |   || ||  ||||||||||||||| |||| || ||| |||||| |||    
T  25421891 ctgacttgaactcgccacggcgagtagaggctctcgcctcgcgagtgacctagaaaccgagtgccttgttaggattttgcgacctttgttgcacgagttg 25421792  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  25421791 ttgagagttgaacctt 25421776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 15441725 - 15441763
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  15441725 tgaactcgccatggcgagtagatactctcgcctcgcgag 15441763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 25744074 - 25744036
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||| |||||||||||||||||| |||||||||||||||    
T  25744074 tgaactcgccatggcgagtagaggctctcgcctcgcgag 25744036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 21292733 - 21292778
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  21292733 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 21292778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 21295039 - 21295072
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  21295039 tcgccatggcgagtagatactctcgcctcgcgag 21295072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 21329210 - 21329326
Alignment:
Q  32 agattaagattgaacctggattaattaag-aatgaactttttcgaagctg-acctgaattcgccatggcgagtagagactctcgcctcgcgagttgccca 129  Q
    ||||| |||||||||||||| ||||| || |||||| ||||| | || || || |||| ||||||| |||||||||| |||||||||||||| || || |    
T  21329210 agattgagattgaacctggaataatttaggaatgaa-tttttgggagttgcacttgaactcgccatagcgagtagaggctctcgcctcgcgaattaccta 21329308  T
Q  130 attacagaa-gccttgtt 146  Q
     |||||||| ||||||||    
T  21329309 gttacagaatgccttgtt 21329326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 21741308 - 21741345
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcg 118  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  21741308 acctgaactcgccatggcgagtagaggctctcgcctcg 21741345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 22075377 - 22075332
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  22075377 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 22075332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 22107136 - 22107181
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| || |||||||||| |||| ||||||||||||||||    
T  22107136 ctgacctgaactcaccatggcgagcagaggctctcgcctcgcgagt 22107181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 23337064 - 23337097
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  23337064 tcgccatggcgagtagatactctcgcctcgcgag 23337097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 23390259 - 23390304
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||||||||||||||| || ||||||| |||||    
T  23390259 ctgacctgaactcgccatggcgagtagaggctatcgcctcacgagt 23390304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 25535318 - 25535285
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  25535318 tcgccatggcgagtagatactctcgcctcgcgag 25535285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 26011799 - 26011856
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| |  ||||||||||||||| | | ||||||||    
T  26011799 acctgaactcgccatggcgagtagaggccttcgcctcgcgagttgtctagttacagaa 26011856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 79107 - 79186
Alignment:
Q  94 atggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacga 172  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  79107 atggcgagtagaggctctcgcctcgcgagttgcccaattacagaagccttgtttaggattttgcgatctttgtcgcacga 79186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 16902 - 17022
Alignment:
Q  4 atgtctagtaatggttaggcaagacttcagattaagattgaacctggattaattaagaatgaactttttcgaag-ctgacctgaattcgccatggcgagt 102  Q
    ||||||| ||||| ||||| |||| |  ||| | ||||||||||||||   ||| ||||||||  |||| |||  |||||||||| |||||| || |||     
T  16902 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacggagagc 17001  T
Q  103 agagactctcgcctcgcgagt 123  Q
    |||| ||||||||||||||||    
T  17002 agaggctctcgcctcgcgagt 17022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 78 - 185
Target Start/End: Original strand, 1839 - 1947
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||  |||| ||||||||  |||| ||||||||| ||||||| |||||||||| | |    
T  1839 ctgacctgaattcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 1938  T
Q  177 ttaagagtt 185  Q
    || ||||||    
T  1939 ttgagagtt 1947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 21238880 - 21238952
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttgttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  21238880 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgttaggattttgcgatct 21238952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 21241430 - 21241502
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttgttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  21241430 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgttaggattttgcgatct 21241502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 24505049 - 24504977
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttgttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| |||||||||||||||||||| |||||||    
T  24505049 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgttaggattttgcgatct 24504977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 31503946 - 31503873
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  31503946 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 31503873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 31506512 - 31506439
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  31506512 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 31506439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 22337474 - 22337359
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||  ||||   ||||| || ||||||||| ||| | || || ||| |||||| |||    
T  22337474 ctgacctgaattcgccacggcgagtagaggctctcgcctcgcgagtgacccagaaacagagagtcttgttaggtttttgtgacctttgttgcacgagttg 22337375  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  22337374 ttgagagttgaacctt 22337359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 186
Target Start/End: Complemental strand, 23076800 - 23076692
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||| ||||   |||||  ||||||||||| ||| |||| || ||| |||||| |||    
T  23076800 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagttacccagaaacagagtgccttgttagg-ttttgcgacctttgttgcacgagttg 23076702  T
Q  177 ttaagagttg 186  Q
    || |||||||    
T  23076701 ttgagagttg 23076692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Complemental strand, 23207634 - 23207578
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| ||||||||| |||||||||||| ||||||||    
T  23207634 cctgaactcgccatagcgagtagaggctctcgccttgcgagttgcccagttacagaa 23207578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 298577 - 298622
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  298577 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagt 298622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 185
Target Start/End: Original strand, 20519957 - 20520062
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    |||||| ||||||| ||| |||||| |||||||||||||||||||| | ||||||||  ||||| ||||| ||| ||||||| ||| ||||||  |||||    
T  20519957 cctgaagtcgccatagcgtgtagaggctctcgcctcgcgagttgcctagttacagaataccttgtttagggttttgcgatctttgttgcacgagatgtta 20520056  T
Q  180 agagtt 185  Q
     |||||    
T  20520057 tgagtt 20520062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 22412900 - 22412953
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattaca 135  Q
    |||||| ||||||| |||||||||| ||||||||||| |||||||||| |||||    
T  22412900 cctgaactcgccatagcgagtagaggctctcgcctcgtgagttgcccagttaca 22412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 80 - 146
Target Start/End: Complemental strand, 25176199 - 25176132
Alignment:
Q  80 gacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    |||||||| |||||||||||||||||| | ||||||||||||  ||| || |||||||| ||||||||    
T  25176199 gacctgaactcgccatggcgagtagaggccctcgcctcgcgaactgcgcagttacagaatgccttgtt 25176132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 23005105 - 23005015
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacg 171  Q
    |||||| ||||||| ||| ||||||   ||||||||||||| |||||| || |||||  |||||||||| ||| ||||||| |||||||||    
T  23005105 cctgaactcgccatagcgggtagagtggctcgcctcgcgagctgcccagtttcagaataccttgttagggttttgcgatctttgtcgcacg 23005015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 119
Target Start/End: Complemental strand, 28406335 - 28406297
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgc 119  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  28406335 acctgaactcgccatggcgagtagaggctctcgcctcgc 28406297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 31756265 - 31756232
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||||||||||| |||||||||||||||    
T  31756265 tcgccatggcgagtagaggctctcgcctcgcgag 31756232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 32451692 - 32451737
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  32451692 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 32451737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 123
Target Start/End: Complemental strand, 23286218 - 23286174
Alignment:
Q  79 tgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||||| |||||| |||||| |||| ||||||||||||||||    
T  23286218 tgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 23286174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 23660400 - 23660336
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||||  |||| ||| |||||||||| |||||| |||||| |||| ||||||||||| ||||    
T  23660400 agaatgaaacttttggaatctgacctgaactcgccacggcgagcagaggctctcgcctcgtgagt 23660336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 21415000 - 21415073
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||| |||||||    
T  21415000 tcgccatggcgagtagagcctctcgcctcgcgagttgtccaattacagaaaccttgtttaggattttgcgatct 21415073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 7300836 - 7300909
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  7300836 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 7300909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 6608028 - 6608100
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatc 160  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| ||||||    
T  6608028 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggatttggcgatc 6608100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 41598543 - 41598428
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||  || | ||||||||  |||| ||||||||| ||||||| || ||||||| | |    
T  41598543 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctagttacagaatgcttgtttaggattttgcgatctttgccgcacgagtcg 41598444  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  41598443 ttgagagttgaacctt 41598428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 45134679 - 45134752
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||| | || ||| ||||||||||| ||||||||| |||||||    
T  45134679 tcgccatggcgagtagagcctctcgcctcgcgagtagtcccatttcagaagccttgtttaggattttgcgatct 45134752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 6759615 - 6759500
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  | ||||||||||||| || ||||||||||||| | |||    
T  6759615 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgtcttgttaggattttgcaatctgtgtcgcacaagttg 6759516  T
Q  177 ttaagagttggacctt 192  Q
     ||||||||| |||||    
T  6759515 ctaagagttgaacctt 6759500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 16092103 - 16092218
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| |||||||||| |||||  ||||   |||||  ||| ||||||||||| |||||||||||| ||| | |||    
T  16092103 ctgacctgaactcgccacggcgagcagaggctctcgcctcccgagtgacccagaaacagagtgccctgttaggattttgcgatctgtgtcacacaagttg 16092202  T
Q  177 ttaagagttggacctt 192  Q
    |||||||||| |||||    
T  16092203 ttaagagttgaacctt 16092218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 138
Target Start/End: Complemental strand, 6520725 - 6520667
Alignment:
Q  80 gacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||||||||||||||||||||||| | |||||||||| |  |||||||||||||||    
T  6520725 gacctgaattcgccatggcgagtagaggccctcgcctcgcaaactgcccaattacagaa 6520667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Original strand, 38855015 - 38855072
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| | |||||||||||| ||||||| ||||||||    
T  38855015 acctgaactcgccatggcgagtagaggccctcgcctcgcgaattgcccagttacagaa 38855072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 39834188 - 39834131
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| ||||||||||||||| | |||| ||||||||    
T  39834188 acctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaa 39834131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 22875424 - 22875309
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||||| |||| |||| ||||||||||||||||  ||||   |||||  | |||||||||  || ||||||| |||||||| | |||    
T  22875424 ctgacctgaactcgccatgacgagcagaggctctcgcctcgcgagtgacccagaaacagagtgacttgttagggctttgcgatctatgtcgcacaagttg 22875325  T
Q  177 ttaagagttggacctt 192  Q
    |||||||||| |||||    
T  22875324 ttaagagttgaacctt 22875309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 20536566 - 20536521
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  20536566 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagt 20536521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 21285954 - 21285897
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||| ||||||||||||| | |||||||||| ||||||||| ||||||||    
T  21285954 acctgaactcgctatggcgagtagaggccctcgcctcgcaagttgcccagttacagaa 21285897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 21918763 - 21918808
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||    
T  21918763 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21918808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 23406739 - 23406694
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  23406739 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagt 23406694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 18818172 - 18818217
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  18818172 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 18818217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 20527779 - 20527746
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  20527779 tcgccatggcgagtagatactctcgcctcgcgag 20527746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 25362903 - 25362948
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| ||||||||||| ||||    
T  25362903 ctgacctgaactcgccatggcgagcagaggctctcgcctcgagagt 25362948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 21674061 - 21674021
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcga 121  Q
    ||||||| |||||||||||||||||| | ||||||||||||    
T  21674061 acctgaactcgccatggcgagtagaggccctcgcctcgcga 21674021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 122
Target Start/End: Complemental strand, 37116704 - 37116664
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||| ||||||| |||||||||| |||||||||||||||    
T  37116704 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 37116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 192
Target Start/End: Original strand, 16365 - 16477
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||  |||||  |||||  |||||||| |||||| |||||||||||||||| | ||||||    
T  16365 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgccttgttgggattttgcgatctgtgtcgcacaagttgtta 16464  T
Q  180 agagttggacctt 192  Q
     |||||| |||||    
T  16465 ggagttgaacctt 16477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 84 - 192
Target Start/End: Original strand, 15866 - 15976
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaag 181  Q
    |||| ||||||| ||||||| || | |||||||||||||||||||| |||||||| |||||| ||||||||| ||||||| |||||||| | |||||| |    
T  15866 tgaactcgccatagcgagtataggccctcgcctcgcgagttgcccagttacagaatgccttgtttaggattttgcgatctttgtcgcacaagttgttatg 15965  T
Q  182 agttggacctt 192  Q
    ||||| |||||    
T  15966 agttgaacctt 15976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 39854 - 39720
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcg 157  Q
    |||||||||||||   || |||||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||| ||||||| |||    
T  39854 agaatgaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcg 39755  T
Q  158 atctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||||||||||| | |||||||| |||| |||||    
T  39754 atctgtgtcgcacaagttgttaagggttgaacctt 39720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 192
Target Start/End: Original strand, 74958 - 75092
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcg 157  Q
    |||||||||||||   || |||||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||| ||||||| |||    
T  74958 agaatgaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcg 75057  T
Q  158 atctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||||||||||| | |||||||| |||| |||||    
T  75058 atctgtgtcgcacaagttgttaagggttgaacctt 75092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 9518 - 9445
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  9518 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 9445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 20579812 - 20579739
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    |||||||||||||||||| |||||||||||||||||| || ||| ||||||||||| ||||||||| |||||||    
T  20579812 tcgccatggcgagtagagcctctcgcctcgcgagttgtcccatttcagaagccttgtttaggattttgcgatct 20579739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 185
Target Start/End: Complemental strand, 26065295 - 26065190
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||||| ||||||||  ||||| ||||| ||| ||||||| ||||||||||  |||||    
T  26065295 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgcccagttacagaataccttgtttagggttttgcgatctttgtcgcacgagatgtta 26065196  T
Q  180 agagtt 185  Q
     |||||    
T  26065195 tgagtt 26065190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 433366 - 433251
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||  |||| || || ||  |||| ||||||||| ||||||| |||||||||| | |    
T  433366 ctgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttgcaaaatgcttgtttaggattttgcgatctttgtcgcacgagtcg 433267  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  433266 ttgagagttgaacctt 433251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 192
Target Start/End: Original strand, 50209900 - 50210090
Alignment:
Q  4 atgtctagtaatggttaggcaagacttcagattaagattgaacctggattaattaagaatgaactttttcgaag-ctgacctgaattcgccatggcgagt 102  Q
    ||||||| ||||| ||||| |||| |  ||| | ||||||||||||||   ||| ||||||||  |||| |||  |||||||||| |||||| ||||||     
T  50209900 atgtctaataatgattaggaaagaatgtagaatgagattgaacctggaaagatttagaatgaaacttttggaattctgacctgaactcgccacggcgagc 50209999  T
Q  103 agagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    |||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||| || ||| |||||| ||||| ||||||| |||||    
T  50210000 agaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttgttgagagttgaacctt 50210090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 83 - 192
Target Start/End: Complemental strand, 16759005 - 16758895
Alignment:
Q  83 ctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaag 181  Q
    ||||| ||||||| || ||||||| | ||| |||||||||||||| | ||||||||  || | ||||||||| ||||||| |||||||||| ||||| ||    
T  16759005 ctgaactcgccatagcaagtagaggccctcacctcgcgagttgcctagttacagaatgctcgtttaggattttgcgatctttgtcgcacgagttgttgag 16758906  T
Q  182 agttggacctt 192  Q
    ||||| |||||    
T  16758905 agttgaacctt 16758895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 52927745 - 52927815
Alignment:
Q  80 gacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttagg 149  Q
    |||||||| |||||||||||||||||| | |||||||||||| ||| ||| |||||||| |||||||||||    
T  52927745 gacctgaactcgccatggcgagtagaggccctcgcctcgcgaattgaccagttacagaatgccttgttagg 52927815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 186
Target Start/End: Original strand, 35260851 - 35260951
Alignment:
Q  88 ttcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttg-ttaggatttcgcgatctgtgtcgcacgaattgttaagagtt 185  Q
    |||||||| |||||||||| | ||||||||||||||| |||| ||||| ||  ||||| ||||||||| ||||||| ||||||||||  ||||| |||||    
T  35260851 ttcgccatagcgagtagaggccctcgcctcgcgagtttcccagttacaaaataccttgcttaggattttgcgatctttgtcgcacgagatgttatgagtt 35260950  T
Q  186 g 186  Q
    |    
T  35260951 g 35260951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 20637206 - 20637165
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  20637206 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 20637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 38801154 - 38801199
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  38801154 ctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagt 38801199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 33681365 - 33681309
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga 137  Q
    ||||||| ||||||||||||| |||| |||||||||||||| || |||| |||||||    
T  33681365 acctgaactcgccatggcgagcagaggctctcgcctcgcgaattacccagttacaga 33681309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 146
Target Start/End: Original strand, 22921635 - 22921698
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    |||| |||||||||||||||||| ||||||||||||||  |||| | |||||||| ||||||||    
T  22921635 tgaactcgccatggcgagtagaggctctcgcctcgcgaactgcctagttacagaatgccttgtt 22921698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 21754392 - 21754350
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  21754392 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 21754350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 192
Target Start/End: Complemental strand, 22532647 - 22532513
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcg 157  Q
    |||||||||||||   || ||||| |||| |||||| || ||| |||| ||||||||||||||||  |||||  |||||  | ||||||||||||| |||    
T  22532647 agaatgaacttttggaaatctgacttgaactcgccacggtgagcagaggctctcgcctcgcgagtgacccaaaaacagagtgacttgttaggattttgcg 22532548  T
Q  158 atctgtgtcgcacgaattgttaagagttggacctt 192  Q
    | || ||| ||||||  |||| ||||||| |||||    
T  22532547 acctttgttgcacgagctgttgagagttgaacctt 22532513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 28194213 - 28194267
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattaca 135  Q
    ||||||| |||||||||| ||||||| ||||||||||||||| | |||| |||||    
T  28194213 acctgaactcgccatggcaagtagaggctctcgcctcgcgagctacccatttaca 28194267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 20248633 - 20248592
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| || ||||||||||||    
T  20248633 acctgaactcgccatggcgagtagaggctatcgcctcgcgag 20248592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 21438124 - 21438091
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  21438124 tcgccatggcgagtagatactctcgcctcgcgag 21438091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 22354335 - 22354376
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgc 119  Q
    |||||||||| |||||| ||||||||||| ||||||||||||    
T  22354335 ctgacctgaactcgccacggcgagtagaggctctcgcctcgc 22354376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 23763541 - 23763508
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  23763541 tcgccatggcgagtagatactctcgcctcgcgag 23763508  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 35981451 - 35981492
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| ||||||||| |||||||| |||||||||||||||    
T  35981451 acctgaactcgccatggtgagtagaggctctcgcctcgcgag 35981492  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 34510158 - 34510094
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||||||   || |||||||||| |||||| |||||| |||| |||||||||| |||||    
T  34510158 agaatgaacttttggaaatctgacctgaactcgccacggcgagcagaggctctcgcctcacgagt 34510094  T

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Target: scaffold0586 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 2201 - 2128
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatct 161  Q
    ||||||||||||||| || ||||||||||| |||||| |||||||||||| ||||| ||||||||| |||||||    
T  2201 tcgccatggcgagtaaaggctctcgcctcgtgagttgtccaattacagaaaccttgtttaggattttgcgatct 2128  T

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Target: scaffold0120 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 32740 - 32836
Alignment:
Q  97 gcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||| |||| ||| ||||||||||||  ||||   |||||| | ||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  32740 gcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagttgaacctt 32836  T

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Target: scaffold0120; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 46265 - 46169
Alignment:
Q  97 gcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||| |||| ||| ||||||||||||  ||||   |||||| | ||||||||||||| |||||||||||||||| ||||||||||||||| |||||    
T  46265 gcgaggagaggctcccgcctcgcgagtgacccataaacagaatgtcttgttaggattttgcgatctgtgtcgcaccaattgttaagagttgaacctt 46169  T

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Target: scaffold0413 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 15377 - 15492
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||| ||||| |||| ||||||||||||||||  || | ||||| ||  |||| |||||||||  |||||| |||||||||||| |    
T  15377 ctgacctgaactcgccatagcgagcagaggctctcgcctcgcgagtgacctatttacaaaatacttgcttaggatttttcgatctttgtcgcacgaatcg 15476  T
Q  177 ttaagagttggacctt 192  Q
    || ||||||| |||||    
T  15477 ttgagagttgaacctt 15492  T

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Target: scaffold0142 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 193
Target Start/End: Complemental strand, 17138 - 17023
Alignment:
Q  79 tgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgt 177  Q
    ||||||||| ||||||||||||| |||| ||||||||||||||||  || | ||||||||  |||| ||||||||| ||||||| ||| |||||| | ||    
T  17138 tgacctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacctatttacagaatacttgtttaggattttgcgatctttgtagcacgagtcgt 17039  T
Q  178 taagagttggacctta 193  Q
    | | ||||| ||||||    
T  17038 tgatagttgaacctta 17023  T

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Target: scaffold0130 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 28189 - 28074
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| | || ||||||||||||||||  ||||   |||||  ||||||| ||||||| || ||||||||||||| | |||    
T  28189 ctgacctgaactcgccacggcgagcaaaggctctcgcctcgcgagtgacccagaaacagagtgccttgtcaggattttgcaatctgtgtcgcacaagttg 28090  T
Q  177 ttaagagttggacctt 192  Q
    |||||||||| |||||    
T  28089 ttaagagttgaacctt 28074  T

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Target: scaffold0475 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 9432 - 9375
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| |||||||||||||||||| ||||||||||||||| | |||| ||||||||    
T  9432 acctgaactcgccatggcgagtagaggctctcgcctcgcgagctacccatttacagaa 9375  T

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Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 10460 - 10407
Alignment:
Q  139 gccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttggacctt 192  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||||| |||||    
T  10460 gccttgttaggattttgcgatctgtgtcgcacaagttgttaagagttgaacctt 10407  T

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Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 1562 - 1618
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| ||||||||||| ||| |||||||||||||||    
T  1562 cctgaactcgccatagcgagtagaggctctcgcctcgtgagatgcccaattacagaa 1618  T

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Target: scaffold0218 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 149
Target Start/End: Original strand, 7841 - 7909
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttagg 149  Q
    |||||| ||||||| ||||||| || |||||||||||||||||||||| ||||| || |||||||||||    
T  7841 cctgaactcgccatagcgagtaaaggctctcgcctcgcgagttgcccagttacaaaatgccttgttagg 7909  T

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Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 13346 - 13227
Alignment:
Q  32 agattaagattgaacctggattaatt-aagaatgaactttttcgaagctg-acctgaattcgccatggcgagtagagactctcgcctcgcgagttgccca 129  Q
    |||||||||||||||||||| || || ||||||||| ||||  || | || ||||||| |||||||||||||||||| | ||||||||||||| |  |||    
T  13346 agattaagattgaacctggaatagtttaagaatgaatttttgtga-gttgcacctgaactcgccatggcgagtagaggccctcgcctcgcgagctaacca 13248  T
Q  130 attacagaa-gccttgttagg 149  Q
     |||||||| |||||||||||    
T  13247 gttacagaatgccttgttagg 13227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 29983 - 30016
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  29983 tcgccatggcgagtagatactctcgcctcgcgag 30016  T

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Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 40290 - 40226
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||||||   || |||||||||| |||||| ||||||||||| ||||||||||||||||    
T  40290 agaatgaacttttggaaatctgacctgaactcgccacggcgagtagaggctctcgcctcgcgagt 40226  T

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Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 19649 - 19705
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| | |||||||| ||||||||||| |||||||||| ||||||||    
T  19649 cctgaactcgccatagggagtagaggctctcgcctcgtgagttgcccagttacagaa 19705  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 60479 - 60535
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| ||||||||||||||||| |||| ||||||||    
T  60479 cctgaactcgccatagcgagtagaggctctcgcctcgcgagtttcccagttacagaa 60535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 242387 - 242354
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  242387 tcgccatggcgagtagatactctcgcctcgcgag 242354  T

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Target: scaffold0228 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 4866 - 4751
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattaca-gaagccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||| ||||||||  ||||   ||| |   ||| |||||||||| |||||| ||||||||| | |||    
T  4866 ctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagttg 4767  T
Q  177 ttaagagttggacctt 192  Q
    |||||||||| |||||    
T  4766 ttaagagttgaacctt 4751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 12448 - 12333
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattaca-gaagccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||| ||||||||  ||||   ||| |   ||| |||||||||| |||||| ||||||||| | |||    
T  12448 ctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagttg 12349  T
Q  177 ttaagagttggacctt 192  Q
    |||||||||| |||||    
T  12348 ttaagagttgaacctt 12333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Complemental strand, 22400 - 22285
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattaca-gaagccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| ||||||||||||| |||| ||||||| ||||||||  ||||   ||| |   ||| |||||||||| |||||| ||||||||| | |||    
T  22400 ctgacctgaactcgccatggcgagcagaggctctcgcttcgcgagtgacccagaaacagggtacctagttaggattttgcgatcagtgtcgcacaagttg 22301  T
Q  177 ttaagagttggacctt 192  Q
    |||||||||| |||||    
T  22300 ttaagagttgaacctt 22285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 25827 - 25942
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacaga-agccttgttaggatttcgcgatctgtgtcgcacgaattg 176  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||  ||||   |||||  ||||||||||||||| |||| || ||| |||||| |||    
T  25827 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagtgacccagaaacagagtgccttgttaggattttgcgacctttgttgcacgagttg 25926  T
Q  177 ttaagagttggacctt 192  Q
     |||||| || |||||    
T  25927 ctaagagctgaacctt 25942  T

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Target: scaffold0628 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 2567 - 2609
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| |||||||||||||||||| ||||||||||||||||    
T  2567 acctgaactcgccatggcgagtagaggctctcgcctcgcgagt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 32892 - 32826
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgtt 146  Q
    ||||||| |||||||||||||||||| | ||||||||||||| | |||| |||||||| ||||||||    
T  32892 acctgaactcgccatggcgagtagaggccctcgcctcgcgagctacccagttacagaatgccttgtt 32826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 486 - 429
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||  |||| ||||||||    
T  486 acctgaactcgccatggcgagcagaggctctcgcctcgcgagtgacccagttacagaa 429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 45555 - 45596
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  45555 acctgaactcgccatggcgagtagaggctctcgcctcgcgag 45596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 192
Target Start/End: Complemental strand, 4871 - 4767
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa-gccttgttaggatttcgcgatctgtgtcgcacgaattgttaagagttgg 187  Q
    ||||||||||||| | || |||||||||||| || | ||||   |||||| ||| ||||||||||| |||| || ||| |||||| |||||||||||||     
T  4871 tcgccatggcgagcaaaggctctcgcctcgcaagctacccagaaacagaatgccatgttaggattttgcgacctttgttgcacgagttgttaagagttga 4772  T
Q  188 acctt 192  Q
    |||||    
T  4771 acctt 4767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 136132 - 136188
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| |||||||||||||||||| ||| ||| ||||    
T  136132 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaa 136188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 138
Target Start/End: Original strand, 144840 - 144896
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    |||||| ||||||| |||||||||| |||||||||||||||||| ||| ||| ||||    
T  144840 cctgaactcgccatagcgagtagaggctctcgcctcgcgagttgtccatttatagaa 144896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 124943 - 124898
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  124943 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 124898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 225763 - 225651
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaagccttg-ttaggatttcgcgatctgtgtcgcacgaattgtta 179  Q
    ||||||| |||||||  | ||||||| | || |||||||||||| |  | ||||||||  |||| ||||||||| ||||||| |||||||||| |||||     
T  225763 acctgaaatcgccataacaagtagaggcccttgcctcgcgagttacatagttacagaatgcttgtttaggattttgcgatctttgtcgcacgagttgttg 225664  T
Q  180 agagttggacctt 192  Q
    ||||||| |||||    
T  225663 agagttgaacctt 225651  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 339694 - 339758
Alignment:
Q  59 agaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||||||  ||| ||||| |||| |||||| |||||| |||| ||||||||||||||||    
T  339694 agaatgaacttttgggaatctgacatgaactcgccacggcgagcagaggctctcgcctcgcgagt 339758  T

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Target: scaffold0507 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 124
Target Start/End: Original strand, 7822 - 7865
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagtt 124  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  7822 acctgaactcgccatagcgagtagaggctctcgcctcgcgagtt 7865  T

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Target: scaffold0078 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 124
Target Start/End: Complemental strand, 10884 - 10841
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagtt 124  Q
    ||||||| ||||||| |||||||||| |||||||||||||||||    
T  10884 acctgaactcgccatagcgagtagaggctctcgcctcgcgagtt 10841  T

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Target: scaffold0556 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 135
Target Start/End: Complemental strand, 8372 - 8318
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattaca 135  Q
    ||||||| |||||||||||||| ||| | |||||||||||||||| ||| |||||    
T  8372 acctgaactcgccatggcgagtggaggccctcgcctcgcgagttgtccagttaca 8318  T

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Target: scaffold0556; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 7167 - 7126
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||| |||||||||||||||||| ||||||||| |||||    
T  7167 acctgaactcgccatggcgagtagaggctctcgccttgcgag 7126  T

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Target: scaffold0490 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 2311 - 2265
Alignment:
Q  77 gctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||||||| |||||| |||||| |||| ||||||||||||||||    
T  2311 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 2265  T

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Target: scaffold0309 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 6969 - 6923
Alignment:
Q  77 gctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||||||| |||||| |||||| |||| ||||||||||||||||    
T  6969 gctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 6923  T

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Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 10512 - 10474
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  10512 tgaactcgccatggcgagtagatactctcgcctcgcgag 10474  T

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Target: scaffold0233 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 14311 - 14349
Alignment:
Q  84 tgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||| ||||||||||||||||| ||||||||||||||||    
T  14311 tgaactcgccatggcgagtagatactctcgcctcgcgag 14349  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 28574 - 28616
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  28574 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 28616  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 133009 - 132967
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||    
T  133009 acctgaactcgccatggcgagcagaggctctcgcctcgcgagt 132967  T

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Target: scaffold1842 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 812 - 857
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  812 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 857  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 815 - 860
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  815 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 860  T

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Target: scaffold0403 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 5206 - 5161
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| ||||||||||| |||| |||||||||||    
T  5206 ctgacctgaactcgccacggcgagtagaggctcttgcctcgcgagt 5161  T

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Target: scaffold0358 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 294 - 253
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgc 119  Q
    |||||||||| ||||||||||||| |||| ||||||||||||    
T  294 ctgacctgaactcgccatggcgagcagaggctctcgcctcgc 253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 119
Target Start/End: Complemental strand, 5070 - 5029
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgc 119  Q
    |||||||||| ||||||||||||| |||| ||||||||||||    
T  5070 ctgacctgaactcgccatggcgagcagaggctctcgcctcgc 5029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 123
Target Start/End: Complemental strand, 725 - 656
Alignment:
Q  54 aattaagaatgaactttttcgaagctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||| ||||||||  |||| ||| |||| ||||| |||||  ||||||||||| ||||||||||||||||    
T  725 aatttagaatgaaacttttggaatctgaactgaactcgccgcggcgagtagaggctctcgcctcgcgagt 656  T

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Target: scaffold0292; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 3828 - 3783
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  3828 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 3783  T

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Target: scaffold0193 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 13569 - 13524
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  13569 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 13524  T

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Target: scaffold0175 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 13450 - 13405
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  13450 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 13405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 3839 - 3794
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| |||||| |||||||||    
T  3839 ctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagt 3794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 7903 - 7858
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| ||||||||||||| |||| |||||| |||||||||    
T  7903 ctgacctgaactcgccatggcgagcagaggctctcgtctcgcgagt 7858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 39119 - 39074
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  39119 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 39074  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 138
Target Start/End: Complemental strand, 19622 - 19565
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttgcccaattacagaa 138  Q
    ||||||| ||||||||||||| |||| |||||||||||||| |  |||| ||||||||    
T  19622 acctgaactcgccatggcgagcagaggctctcgcctcgcgaatgacccagttacagaa 19565  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 2209 - 2164
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||||||||||||||| || ||||||| |||||    
T  2209 ctgacctgaactcgccatggcgagtagaggctatcgcctcacgagt 2164  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Complemental strand, 9670 - 9637
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  9670 tcgccatggcgagtagatactctcgcctcgcgag 9637  T

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Target: scaffold0011 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Complemental strand, 52270 - 52225
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  52270 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 52225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 123
Target Start/End: Original strand, 167742 - 167787
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgagt 123  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||    
T  167742 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgagt 167787  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 122
Target Start/End: Original strand, 58194 - 58227
Alignment:
Q  89 tcgccatggcgagtagagactctcgcctcgcgag 122  Q
    ||||||||||||||||| ||||||||||||||||    
T  58194 tcgccatggcgagtagatactctcgcctcgcgag 58227  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 10305 - 10349
Alignment:
Q  81 acctgaattcgccatggcgagtagagactctcgcctcgcgagttg 125  Q
    ||||||| ||||||  |||||||||| ||||||||||||||||||    
T  10305 acctgaactcgccaaagcgagtagaggctctcgcctcgcgagttg 10349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 20761 - 20717
Alignment:
Q  78 ctgacctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||||||| |||||| |||||| |||| |||||||||||||||    
T  20761 ctgacctgaactcgccacggcgagcagaggctctcgcctcgcgag 20717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 122
Target Start/End: Original strand, 128735 - 128775
Alignment:
Q  82 cctgaattcgccatggcgagtagagactctcgcctcgcgag 122  Q
    |||||| ||||||| |||||||||| |||||||||||||||    
T  128735 cctgaactcgccatagcgagtagaggctctcgcctcgcgag 128775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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