View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19710_low_8 (Length: 251)
Name: NF19710_low_8
Description: NF19710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19710_low_8 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 8795370 - 8795582
Alignment:
| Q |
17 |
atatgatcacactagctatatgaaataatacaaattaataaaatattccatctatagggagtagtgtttacacggaaccttgatgagacaaatgagaaaa |
116 |
Q |
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| T |
8795370 |
atataatcacactagctatatgaaataatacaaattaataaaatattccatctatagggagtagtgtttacacggaaccttgatgagacaaatgagaaaa |
8795469 |
T |
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| Q |
117 |
agaagcaagagaacaaatcaatcaaattcatcattattcttaaggacctactaacacatcatagcttaatctcttttttaggtcattaatcaaatccaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8795470 |
agaagcaagagaacaaatcaatcaaattcatcattattcttaaggacctactaacacatcatagcttaatctcttttttaggtcattaatcaaatccaat |
8795569 |
T |
|
| Q |
217 |
caactttgcaaga |
229 |
Q |
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||||||||||||| |
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| T |
8795570 |
caactttgcaaga |
8795582 |
T |
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