View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19711_low_16 (Length: 249)
Name: NF19711_low_16
Description: NF19711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19711_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 1935903 - 1936127
Alignment:
| Q |
10 |
gcacagatctcaatacaaatggatattctcttccatgaaacggagtctcgaaaaatcttgcctgtcagaaaacatttttaataatgtcaggaatatcaaa |
109 |
Q |
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| T |
1935903 |
gcacagatctcaatacaaatggatattctcttccatgaaacggagtctcgaaaaatcttgcctgtcagaaaacatttttaataatgtcaggaatatcaaa |
1936002 |
T |
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| Q |
110 |
gctaaatggtgtacttcaataataaacatgcaatagaaaaattaacctgaaaacgacttaattatgcaaagttaaggccaccattcgcgtcaaggtcaca |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
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| T |
1936003 |
gctaaatggtgtacttcaataataaacatgcaatagaaaaattaacctgaaaacgacttaattgtgcaaagttaaggccaccatccgcgtcaaggtcaca |
1936102 |
T |
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| Q |
210 |
tgaattaaaaatttgatgtaaaact |
234 |
Q |
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||||||||||||||||||||||||| |
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| T |
1936103 |
tgaattaaaaatttgatgtaaaact |
1936127 |
T |
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