View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19711_low_3 (Length: 494)
Name: NF19711_low_3
Description: NF19711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19711_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 12 - 476
Target Start/End: Complemental strand, 35327357 - 35326893
Alignment:
| Q |
12 |
agcagagagcaaagaggctgcatcataaataaaaag-ataagtggttatgcaaataaatttgtttgaaggcttttgtggttaatgacttgtttgaaccaa |
110 |
Q |
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|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||||||||| |
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| T |
35327357 |
agcacagagcaaagaggctgcatcataaataaaaaggataagtggttatgcaaataaatttgtttgaaggcttttgtggattat------tttgaaccaa |
35327264 |
T |
|
| Q |
111 |
gtcattaactaaacagaagcttaatctctgtgcctttcccttcagaagcttaccatccctcaatgaagcccctatctcctttcttctttgtactaacgaa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
35327263 |
gtcattaactaaacagaagcttaatctctgtgcctttcccttcagaagcttaccatccctcaatgaagcccctatctcctttcttctttgtactaatgaa |
35327164 |
T |
|
| Q |
211 |
cagctttctttttgtggggggatcctggtcagttgggtatcctgaaatcatgaaaaaatgaaaggtaagttccttattactgcatgc----atgcatgca |
306 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
35327163 |
cagctttctttttgtggggggatcctggtcagttgggtatcctgaaatcatgaaaaaatgaaaggtaagttccttattactgcatgcatgtatgcatgca |
35327064 |
T |
|
| Q |
307 |
tgtttgtttgagatagagagagatgcatataagggaacctggtggaggctggtttctctgaatctctggtttctgcattttgaagaatg-aaaaagtgag |
405 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
35327063 |
tgtttgtttgagatagagagagatgcatataagggaacctggtggaggctggtttctctgaatctctggtttctgcattttgaagaatgaaaaaagtgag |
35326964 |
T |
|
| Q |
406 |
ttgtgtaaaggtggctggtttgcacttgtatcaatcaaggtatgtgtatgtgctgaattaaattgctatat |
476 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
35326963 |
ttgtgtaaaggtggctggtttgcacttgtatcaatcaaggtatgtgtatgtgctgaattaaattggtatat |
35326893 |
T |
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