View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19713_low_16 (Length: 301)
Name: NF19713_low_16
Description: NF19713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19713_low_16 |
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Alignment Details
Target: chr4 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 41 - 284
Target Start/End: Original strand, 43966841 - 43967084
Alignment:
| Q |
41 |
cacatcatcaacgttaacaagaataactacaaaagcaaaataagaaccttctggtaatagaattaacagaagcaataatctcagcagtttgataagctct |
140 |
Q |
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| T |
43966841 |
cacatcatcaacgttaacaagaataactacaaaagcaaaataagaaccttctggtaatagaattaacagaagcaataatctcagcagtttgataagctct |
43966940 |
T |
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| Q |
141 |
ctgagtaatagcaggccaaatccaacaattattatcacaagcacccatttctttcaaatcaaaagcagctctaatactctgtttcttccctctatcagat |
240 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43966941 |
ctgagtaatagcaggccaaatccaacaattattatcacaagcacccatttctttcaaatcaaaagcagctctaatactctgtttcttccctctatcagat |
43967040 |
T |
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| Q |
241 |
aaaccattatccatagaagtcttagctacagggttcgtgtttat |
284 |
Q |
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| T |
43967041 |
aaaccattatccatagaagtcttagctacagggttcgtgtttat |
43967084 |
T |
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