View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19714_high_7 (Length: 254)
Name: NF19714_high_7
Description: NF19714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19714_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 20 - 248
Target Start/End: Complemental strand, 2272027 - 2271799
Alignment:
| Q |
20 |
cagccctcatcccataaaatcaaaccagaaacgcaggaagccagtaaatacaaaagcattacataccacattatttttgcaccgattctaaacttgagat |
119 |
Q |
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| T |
2272027 |
cagccctcatcccataaaatcaaaccagaaacgcaggaagccagtaaatacaaaagcattacataccacattatttttgcaccgattctaaacttgagat |
2271928 |
T |
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| Q |
120 |
aataagtcattacttaccacattacaccaacattgtaactactttaattatgaacattttagttggtgtaaaatcccctctgtagaagaacaatattcat |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2271927 |
aataagtcattacttaccacattacaccaacattgtaactactttaattatgaacattttagttggtgtaaaatcccctctgtagaagaacaatattcat |
2271828 |
T |
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| Q |
220 |
cttaaatttcagcattgaattcatctcac |
248 |
Q |
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|||||||||||||||||||||||| |||| |
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| T |
2271827 |
cttaaatttcagcattgaattcatttcac |
2271799 |
T |
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