View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19716_high_6 (Length: 251)
Name: NF19716_high_6
Description: NF19716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19716_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 25896393 - 25896544
Alignment:
| Q |
15 |
cagagagtaaggcagcttctgaaatcataacgcctaagttgatatataatctcttcagcgatggaaaatgaaatgcagaatgttcattgatatgaacttc |
114 |
Q |
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| T |
25896393 |
cagagagtaaagcaacttctgaaatcataacgcctaagtcgatatataacatcttcagtgatggaaaatgaaatgcagaatgttcattgatatgaacttc |
25896492 |
T |
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| Q |
115 |
acactcaagtctgtggtgttttgaaaagacaaacaagttattgataacattg |
166 |
Q |
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| T |
25896493 |
acactcaagtctgtggtgttttgaaaagaaaaacaggttattgataacattg |
25896544 |
T |
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