View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19717_high_36 (Length: 202)
Name: NF19717_high_36
Description: NF19717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19717_high_36 |
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Alignment Details
Target: chr2 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 37733768 - 37733616
Alignment:
| Q |
1 |
gttcttcgttgatttgtgaatattgtttttgcggaattttcgttgttttgggt--ctctctctcttttcttgtgatggtttggtatggatgaagaatggg |
98 |
Q |
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| T |
37733768 |
gttcttctttgatttgtgaatattgtttttgcggaattttcgttgtttttggtttctctctctcttttcttgtgatggtttggtatggatgaagaatggg |
37733669 |
T |
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| Q |
99 |
taagaagaggaaagtagatacctcttcctgatatttataagcaaaaagtatat |
151 |
Q |
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| T |
37733668 |
taagaagaggaaagtagatgcctcttcctgatatttataagcaaaaagtatat |
37733616 |
T |
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